Rh5AG217300

presynapse organization

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0005139
Physical Location & Seq
Reverse (-)
25602829 .. 25613793
10965 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG217300.1

Sequence Viewer

Length: 3567 bp
ATGTTTCTCAGCAAAGAAATTGAGGATCTGCATGATGATGACTTTGAGGGATCCAAAACTGAGCACCATATATTCACAGAGGTTTTCTTTGGTGGTGACGGTGCTAGCACGAGTAAGAGATGTCTTGTAACTGGAGTGATTAACTTTGAATGTGAGTCAAGTAAGACCACAGATACATCACTCTCTTCAAACAGTGAAAACTCAATTGTAACGAATCAGTCAAACTCTAAAAATACTTGTGTGGAGGAGTTTTATAATGCTACTGAGGAATCTAGAGAAATTTTTGGACCAGGGTTTTTCCCGGACAGATCCGCTTGGCTAGATACGAATGGCGAAGATGTGAGTGCTAAGAGAATGAAGTTTTCAGTTGATGAACTTCCTAGTGCAAAACCTGGTTTAGGAAAGGTAATAGATTTGTCCATAGTTTCAAAAGAAATGGTTTCTGGCTTGTCTGTTACTACAGAATCCATTACTGAAACAGTGACATTTCGTTTGGTCGAGTCTTCGAGTGAGGGAGTTACATCTAGTTGCTATCTGTTAAAGCAGCCTGCAAAACTTGATAGAGGGGCCATAGTAGGTGACTCTGACGTTTCAAAGTGCAGATTACCAACTTCTGATGGGAATGATGGAAAGGAACTACGTGCAAGTAAAGCTGTTGCTTCACCTGTTTCCCAGGAGAGCTTCTCAACCATGCTTTTGGCTACAGGTTCCCCTGTCACTCTATTGGATAAGTTGGGAACTCCGCTAGGTGCTGAGGGAAAACCCGAGGGGTTGGATAGATCTGCTATTGCCTTCAAGAAAGACTCTAGTAAGGATCCTCGTCTGCTTCTCCAGTATGATGTCAATCGCTTACTTGAAGCTGCAGGATGGCATATTCAGAGGCGGAAAAGACCTAGTAGAGCTTATATGGAGTCTGTTTATGTAACACCAAAAGGAAGGTTAATTCGTGACTTCCCCAAAGCTTGGCGGTTGTGTGGTGAACTTTTGTTTGCAGATAGGTGCAGTTCGCTGCAGAGAGATGATGCAAAGGAATGGTCCAATATTAATCAGTTTTGGTCAGATCTATCTGGTGCTTTAGTAAATTTTGAGAAAGAGATGAATCAACCAGAACCTGCTACTGAATTGGATTATTGGTGGAGGCTCTTAGATCCCTTTGTGATTGTTGTGTTTATTGAGAGAAAGATTCTTGCTCTGAGAAAAGGAGAGACTGTTAAAGCAACTCAAAGTTTAGCTATTAATACTAATCATAAGGTTTTGGCCTTGACTAATGCGAATAGTATCAAAAATCATCTGGAGAAGGAAGATGTTTCTGCTCCCCTCTGTGATACAACTCTGGCAGGAGGGAGTGGATTGGCAGTTTCTGAGGGGAATGTTATGGAAGATGTATCGGTGGTTTGTTCTGAGGAAAGAGATGAACTGCTGGGAGGCATGACTTACGATAGGCTGGGAGATAATCTGCAGGGGTCTCTGGAGTACCAAATAAAATGCACAAGTAATGTTGTTTTGAAAAAGAAAATAAGAAGGAAGTGTAAAAAGATTTCTGAAATGGAACCAAGCTCCACTTCTAGTAATAATATTGGTTTGCAATGCATTGATGTCAGTGGTAACCAGTCAAAGTTGAAAGAGGTCGATGGTGACCTTGCAGGCAATAAAAGAAGTAAAGGAAGTTGCAAGAAGTCCTCATCTCTCAACTCCTCCCAGCATGTGGTTGGTGAAAAAAGCCCAAAGTCTGTGAAAAATGTTCGTGAATATGATGATTTTAAAACTGGAAAGAAGAAACCATCTAGATGTGAAATCAAAGATGATGACTTACTGGTTTCAGCTATCATAAAGAACACAGATTTTAGTGCAAGTCCTGGTCGATGTTCTTCTAGAAAGAAAGGCTGCAAATCTAGAGCTCATAGGAAGCATAAAAGTCAAAAGAGCCATTGCAAGTTGCTTCTTAGAAGCCTGGGTAGTGTAGGAGTAAAAACAGTTCTGTCTTGGATGCTTGATGCTGGGGTCATATTTCTGGATGATGTGATCCAGTATCGGAATACTAAGGATGGTTCTGTTATTAAAGATGGTCTAGTTACCAGGGATGGTATTTTTTGCAAGTGTTGCAGTGAAGTACTTACAGTTTCTGAGTTCAAGATTCATGGTGGGTTCAGACTAAACCGTCCATGTTTAAATCTTTTTCTGGAATCTGGTAAGGCCTTCTCCTTATGCCAGCTTCAAGCCTGGTCAGCTGAATACAAGTCCAGGAAACGGCGGACTCAAGTGGTGCGAGCTGATGAAAATGATGAAAATGATGATTCTTGCGGACTTTGTGGTGAAGGGGGCGAGCTGATATGCTGTGATAACTGCCCCTCTACTTTTCATCAGGCTTGCTTGTCTCTGCAGTACTTATCAACTGCAATACCCACAATTCTCAATTGCCTTGACCCAAAATTGAATGAAAAGTTAGAGACTGGAGAAGTCACAATGAAGGATGACTTGGTGCATGGAACAACAGTTGCAGAGATGCCACTTATTGCAACTTGCAGTCGATACCGTCGCCAGGGAATGTGCCGACGCCTTCTGACTGCTATTGAAGAGATGCTGATATCTTTTAAGGTGGAAAAGCTTGTAATAGCTGCCATTCCAGATTTGGTGGGGACATGGACCGAGGGTTTTGGCTTTATACCTGTGGAAGACAGAGAAAAGCAAAGCTTGAACAAGATCAATTTGATGGTTTTTCCTGGAACGGTTTTACTCAAGAAGCCATTATGTGAAAATGAAACAGCATATAGGCATCCTGGAACATGTCATACATCATCCTTGGAAACGGGAGGATTGAGAAAAGAATGTTGTTCTGAAGAAGAGCCCATGGTTGAGTTTGTGCACTCTGATGATACTTGTGGAAACAAAACTGGTGCTGAAGCAGGAATTGAATTTGTAGAAGGTACTAATTTAGAAGAATGTGATGATGGTAGTAAACTATTTATTGCTGCTGATACTGGACCAGTTGGTACATCAGAAGGAAAAAACAAAGCAACTGAGGTAGGTATTCAATCCAGAGATGCCATTGTTGGGTTTGTACAACGACATGTTGTCCAGTGTTCTGCTAACAAAGCTGGTGTTGAAATGGAAATTAAAAGTAAGAAGTCGGTGGAATCTGAATCGTATGCTGAAACGGGTATAAAGGCTGTAAAGCAATCGGATGGGATATGTCATGCGGACATAGTTGCTGATGCAGTTAGACATGAAGTCGAGAATTTCCAGGAATTTGAAGCTGTAGAGCAATCAAAAACCTGTTGCCAGATTGAAGTAGGCATTGAATCAGAAATAAGGCAGATGACCGGCAAGGATTTGCTGGAATCTGAAGTCGGCGGGGAACCAGAAGGTAGAGTTTTTGAAAGCAATCTTATGCAAGTAGTGGGTGAAGCCAAAACAAGTACTTTGCAGGAGCAATTTTTAAAGCTGTCTTGTGAAGAACCAGCTTCAGCAGTAGAAAATAGCAAGCCGGAAACGGTTACTAATGTTGTTGAATCCTCGGAAATGTATGATGAAACACAGCTTTCTCTGGATGAACAATCGCAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000122 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0005911 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008080 GO:0008134 GO:0008150 GO:0008152 GO:0009506 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010385 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015630 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016458 GO:0016569 GO:0016570 GO:0016573 GO:0016581 GO:0016740 GO:0016746 GO:0016747 GO:0017053 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0030054 GO:0031047 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0032993 GO:0034212 GO:0034641 GO:0036211 GO:0042393 GO:0042826 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043543 GO:0043966 GO:0043971 GO:0043972 GO:0044030 GO:0044154 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044728 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050808 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0055044 GO:0060255 GO:0061733 GO:0065007 GO:0070013 GO:0070491 GO:0070603 GO:0071704 GO:0071840 GO:0072553 GO:0080090 GO:0080188 GO:0090304 GO:0090545 GO:0090568 GO:0097159 GO:0099172 GO:1901360 GO:1901363 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1904949 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas PHD

Protein Analysis

1188

Amino Acids

130.73

Weight (kDa)

5.37

Isoelectric Point (pI)

42.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TDBD PF16135 689 - 739 1.3e-15 Tify domain binding domain
PHD PF00628 767 - 796 8.3e-06 PHD-finger
IDM1_C PF23209 827 - 915 1.6e-33 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 255
AasI GACNNNNNNGTC 1 cut(s) 2157
Acc36I ACCTGC 1 cut(s) 1120
AccB7I CCANNNNNTGG 2 cut(s) 963, 1705
AciI CCGC 8 cut(s) 312, 743, 883, 967, 2251, 2301, 3197, 3351
AclWI GGATC 8 cut(s) 33, 45, 58, 303, 809, 822, 1142, 2017
AcsI RAATTY 5 cut(s) 279, 1081, 2912, 3235, 3245
AcuI CTGAAG 4 cut(s) 2856, 2919, 3363, 3447
AcyI GRCGYC 1 cut(s) 2554
AfaI GTAC 7 cut(s) 1475, 2112, 2384, 2926, 2992, 3060, 3418
AfiI CCNNNNNNNGG 6 cut(s) 398, 963, 1705, 2247, 2539, 3051
AflIII ACRYGT 2 cut(s) 2783, 3067
AhdI GACNNNNNGTC 2 cut(s) 3071, 3227
AjuI GAANNNNNNNTTGG 4 cut(s) 1546, 1578, 2459, 2491
Alw21I GWGCWC 3 cut(s) 66, 1900, 2865
Alw26I GTCTC 4 cut(s) 1199, 1470, 2379, 2441
Alw44I GTGCAC 1 cut(s) 2861
AlwI GGATC 8 cut(s) 33, 45, 58, 303, 809, 822, 1142, 2017
AlwNI CAGNNNCTG 3 cut(s) 1112, 1361, 2123
Ama87I CYCGRG 1 cut(s) 764
AoxI GGCC 3 cut(s) 567, 1257, 2193
ApaLI GTGCAC 1 cut(s) 2861
ApeKI GCWGC 6 cut(s) 544, 860, 1009, 1884, 2615, 2969
ApoI RAATTY 5 cut(s) 279, 1081, 2912, 3235, 3245
ArsI GACNNNNNNTTYG 4 cut(s) 475, 507, 1019, 1051
AseI ATTAAT 2 cut(s) 1044, 1236
AspS9I GGNCC 5 cut(s) 287, 567, 1035, 2643, 2981
AsuC2I CCSGG 1 cut(s) 302
AsuHPI GGTGA 8 cut(s) 107, 590, 654, 989, 1646, 1724, 2324, 3413
AsuNHI GCTAGC 1 cut(s) 104
AvaI CYCGRG 1 cut(s) 764
AvaII GGWCC 4 cut(s) 287, 1035, 2643, 2981
BaeGI GKGCMC 1 cut(s) 2865
BamHI GGATCC 2 cut(s) 50, 814
BanII GRGCYC 2 cut(s) 1900, 2847
BauI CACGAG 1 cut(s) 109
BbsI GAAGAC 2 cut(s) 495, 2679
Bbv12I GWGCWC 3 cut(s) 66, 1900, 2865
BbvCI CCTCAGC 1 cut(s) 753
BbvI GCAGC 6 cut(s) 556, 847, 996, 1871, 2602, 2956
BceAI ACGGC 1 cut(s) 2264
BcnI CCSGG 1 cut(s) 302
BcoDI GTCTC 4 cut(s) 1199, 1470, 2379, 2441
BfmI CTRYAG 7 cut(s) 459, 702, 861, 1010, 1457, 2378, 3255
BfuAI ACCTGC 1 cut(s) 1120
BglII AGATCT 2 cut(s) 779, 1060
BisI GCNGC 6 cut(s) 545, 861, 1010, 1885, 2616, 2970
BlsI GCNGC 6 cut(s) 546, 862, 1011, 1886, 2617, 2971
BmcAI AGTACT 3 cut(s) 2112, 2384, 3418
Bme18I GGWCC 4 cut(s) 287, 1035, 2643, 2981
BmeRI GACNNNNNGTC 2 cut(s) 3071, 3227
BmeT110I CYCGRG 1 cut(s) 764
BmgT120I GGNCC 5 cut(s) 287, 567, 1035, 2643, 2981
BmiI GGNNCC 6 cut(s) 52, 568, 709, 816, 1551, 3357
BmsI GCATC 8 cut(s) 1012, 1977, 1984, 2493, 2568, 2782, 3031, 3202
BmtI GCTAGC 1 cut(s) 108
BpiI GAAGAC 2 cut(s) 495, 2679
BplI GAGNNNNNCTC 2 cut(s) 668, 700
BpmI CTGGAG 5 cut(s) 153, 815, 1313, 1490, 2472
Bpu10I CCTNAGC 1 cut(s) 753
BpuEI CTTGAG 2 cut(s) 2241, 2720
BpuMI CCSGG 1 cut(s) 302
BsaAI YACGTR 1 cut(s) 641
BsaBI GATNNNNATC 1 cut(s) 843
BsaHI GRCGYC 1 cut(s) 2554
BsaI GGTCTC 1 cut(s) 1470
BsaXI ACNNNNNCTCC 2 cut(s) 1194, 1224
Bsc4I CCNNNNNNNGG 6 cut(s) 398, 963, 1705, 2247, 2539, 3051
Bse118I RCCGGY 1 cut(s) 3320
Bse3DI GCAATG 2 cut(s) 1592, 1927
Bse8I GATNNNNATC 1 cut(s) 843
BseJI GATNNNNATC 1 cut(s) 843
BseLI CCNNNNNNNGG 6 cut(s) 398, 963, 1705, 2247, 2539, 3051
BseMI GCAATG 2 cut(s) 1592, 1927
BseMII CTCAG 9 cut(s) 22, 51, 255, 744, 1184, 1353, 1392, 2115, 3009
BseRI GAGGAG 2 cut(s) 260, 1684
BseSI GKGCMC 1 cut(s) 2865
BseXI GCAGC 6 cut(s) 556, 847, 996, 1871, 2602, 2956
BseYI CCCAGC 4 cut(s) 1420, 1444, 1698, 1997
BsgI GTGCAG 2 cut(s) 619, 1021
BshFI GGCC 3 cut(s) 569, 1259, 2195
BsiHKAI GWGCWC 3 cut(s) 66, 1900, 2865
BsiHKCI CYCGRG 1 cut(s) 764
BsiSI CCGG 3 cut(s) 302, 3321, 3485
BslFI GGGAC 1 cut(s) 2650
BslI CCNNNNNNNGG 6 cut(s) 398, 963, 1705, 2247, 2539, 3051
BsmAI GTCTC 4 cut(s) 1199, 1470, 2379, 2441
BsmFI GGGAC 1 cut(s) 2650
BsnI GGCC 3 cut(s) 569, 1259, 2195
Bso31I GGTCTC 1 cut(s) 1470
BsoBI CYCGRG 1 cut(s) 764
Bsp1286I GDGCHC 4 cut(s) 66, 1900, 2847, 2865
Bsp1407I TGTACA 1 cut(s) 3058
Bsp143I GATC 9 cut(s) 25, 50, 308, 779, 814, 1060, 1147, 2022, 2700
Bsp19I CCATGG 1 cut(s) 2847
BspACI CCGC 8 cut(s) 312, 743, 883, 967, 2251, 2301, 3197, 3351
BspANI GGCC 3 cut(s) 569, 1259, 2195
BspCNI CTCAG 9 cut(s) 21, 52, 256, 745, 1185, 1354, 1393, 2116, 3010
BspLI GGNNCC 6 cut(s) 52, 568, 709, 816, 1551, 3357
BspMAI CTGCAG 4 cut(s) 865, 1014, 1461, 2382
BspMI ACCTGC 1 cut(s) 1120
BspOI GCTAGC 1 cut(s) 108
BspPI GGATC 8 cut(s) 33, 45, 58, 303, 809, 822, 1142, 2017
BspQI GCTCTTC 1 cut(s) 2835
BspTNI GGTCTC 1 cut(s) 1470
BsrDI GCAATG 2 cut(s) 1592, 1927
BsrFI RCCGGY 1 cut(s) 3320
BsrGI TGTACA 1 cut(s) 3058
BssAI RCCGGY 1 cut(s) 3320
BssMI GATC 9 cut(s) 25, 50, 308, 779, 814, 1060, 1147, 2022, 2700
BssNI GRCGYC 1 cut(s) 2554
BssSI CACGAG 1 cut(s) 109
BssT1I CCWWGG 2 cut(s) 2799, 2847
Bst2BI CACGAG 1 cut(s) 109
Bst6I CTCTTC 3 cut(s) 190, 2568, 2835
BstACI GRCGYC 1 cut(s) 2554
BstAPI GCANNNNNTGC 1 cut(s) 2100
BstAUI TGTACA 1 cut(s) 3058
BstBAI YACGTR 1 cut(s) 641
BstC8I GCNNGC 8 cut(s) 106, 549, 1645, 2210, 2268, 2324, 2368, 3482
BstDSI CCRYGG 1 cut(s) 2847
BstEII GGTNACC 2 cut(s) 1604, 1634
BstENI CCTNNNNNAGG 1 cut(s) 396
BstKTI GATC 9 cut(s) 28, 53, 311, 782, 817, 1063, 1150, 2025, 2703
BstMAI GTCTC 4 cut(s) 1199, 1470, 2379, 2441
BstMBI GATC 9 cut(s) 25, 50, 308, 779, 814, 1060, 1147, 2022, 2700
BstMWI GCNNNNNNNGC 4 cut(s) 650, 2100, 2225, 3092
BstNSI RCATGY 3 cut(s) 1706, 2787, 3071
BstPI GGTNACC 2 cut(s) 1604, 1634
BstSFI CTRYAG 7 cut(s) 459, 702, 861, 1010, 1457, 2378, 3255
BstSLI GKGCMC 1 cut(s) 2865
BstV1I GCAGC 6 cut(s) 556, 847, 996, 1871, 2602, 2956
BstV2I GAAGAC 2 cut(s) 495, 2679
BstX2I RGATCY 7 cut(s) 25, 50, 308, 779, 814, 1060, 1147
BstXI CCANNNNNNTGG 1 cut(s) 697
BstYI RGATCY 7 cut(s) 25, 50, 308, 779, 814, 1060, 1147
BsuRI GGCC 3 cut(s) 569, 1259, 2195
BtgI CCRYGG 1 cut(s) 2847
BtsI GCAGTG 1 cut(s) 2110
BtsIMutI CAGTG 5 cut(s) 199, 486, 1606, 2110, 3083
BveI ACCTGC 1 cut(s) 1120
Cac8I GCNNGC 8 cut(s) 106, 549, 1645, 2210, 2268, 2324, 2368, 3482
CaiI CAGNNNCTG 3 cut(s) 1112, 1361, 2123
Cfr10I RCCGGY 1 cut(s) 3320
Cfr13I GGNCC 5 cut(s) 287, 567, 1035, 2643, 2981
CseI GACGC 1 cut(s) 2562
CsiI ACCWGGT 1 cut(s) 391
Csp6I GTAC 7 cut(s) 1474, 2111, 2383, 2925, 2991, 3059, 3417
CviQI GTAC 7 cut(s) 1474, 2111, 2383, 2925, 2991, 3059, 3417
DpnI GATC 9 cut(s) 27, 52, 310, 781, 816, 1062, 1149, 2024, 2702
DpnII GATC 9 cut(s) 25, 50, 308, 779, 814, 1060, 1147, 2022, 2700
DraI TTTAAA 3 cut(s) 1762, 2169, 3438
DrdI GACNNNNNNGTC 1 cut(s) 2157
DriI GACNNNNNGTC 2 cut(s) 3071, 3227
DseDI GACNNNNNNGTC 1 cut(s) 2157
Eam1104I CTCTTC 3 cut(s) 190, 2568, 2835
Eam1105I GACNNNNNGTC 2 cut(s) 3071, 3227
EarI CTCTTC 3 cut(s) 190, 2568, 2835
EciI GGCGGA 2 cut(s) 898, 2266
Ecl136II GAGCTC 1 cut(s) 1898
Eco130I CCWWGG 2 cut(s) 2799, 2847
Eco147I AGGCCT 1 cut(s) 2195
Eco24I GRGCYC 2 cut(s) 1900, 2847
Eco31I GGTCTC 1 cut(s) 1470
Eco32I GATATC 1 cut(s) 2586
Eco47I GGWCC 4 cut(s) 287, 1035, 2643, 2981
Eco53kI GAGCTC 1 cut(s) 1898
Eco57I CTGAAG 4 cut(s) 2856, 2919, 3363, 3447
Eco88I CYCGRG 1 cut(s) 764
Eco91I GGTNACC 2 cut(s) 1604, 1634
EcoICRI GAGCTC 1 cut(s) 1898
EcoNI CCTNNNNNAGG 1 cut(s) 396
EcoO65I GGTNACC 2 cut(s) 1604, 1634
EcoRV GATATC 1 cut(s) 2586
EcoT14I CCWWGG 2 cut(s) 2799, 2847
EcoT22I ATGCAT 1 cut(s) 1592
EcoT38I GRGCYC 2 cut(s) 1900, 2847
ErhI CCWWGG 2 cut(s) 2799, 2847
FalI AAGNNNNNCTT 6 cut(s) 1546, 1578, 2459, 2491, 2675, 2707
FaqI GGGAC 1 cut(s) 2650
FauI CCCGC 1 cut(s) 3344
Fnu4HI GCNGC 6 cut(s) 545, 861, 1010, 1885, 2616, 2970
FriOI GRGCYC 2 cut(s) 1900, 2847
Fsp4HI GCNGC 6 cut(s) 545, 861, 1010, 1885, 2616, 2970
GluI GCNGC 6 cut(s) 545, 861, 1010, 1885, 2616, 2970
GsaI CCCAGC 4 cut(s) 1424, 1448, 1702, 2001
GsuI CTGGAG 5 cut(s) 153, 815, 1313, 1490, 2472
HaeIII GGCC 3 cut(s) 569, 1259, 2195
HapII CCGG 3 cut(s) 302, 3321, 3485
HgaI GACGC 1 cut(s) 2562
Hin1I GRCGYC 1 cut(s) 2554
HindIII AAGCTT 3 cut(s) 960, 2603, 2689
HpaII CCGG 3 cut(s) 302, 3321, 3485
HphI GGTGA 8 cut(s) 107, 590, 654, 989, 1646, 1724, 2324, 3413
Hpy166II GTNNAC 3 cut(s) 980, 2863, 2957
Hpy8I GTNNAC 3 cut(s) 980, 2863, 2957
Hpy99I CGWCG 2 cut(s) 2538, 2556
HpyCH4IV ACGT 2 cut(s) 588, 640
HpyF10VI GCNNNNNNNGC 4 cut(s) 650, 2100, 2225, 3092
HpySE526I ACGT 2 cut(s) 588, 640
Hsp92I GRCGYC 1 cut(s) 2554
Kzo9I GATC 9 cut(s) 25, 50, 308, 779, 814, 1060, 1147, 2022, 2700
LguI GCTCTTC 1 cut(s) 2835
LmnI GCTCC 3 cut(s) 1318, 1562, 3427
Lsp1109I GCAGC 6 cut(s) 556, 847, 996, 1871, 2602, 2956
LweI GCATC 8 cut(s) 1012, 1977, 1984, 2493, 2568, 2782, 3031, 3202
MabI ACCWGGT 1 cut(s) 391
MaeII ACGT 2 cut(s) 588, 640
MalI GATC 9 cut(s) 27, 52, 310, 781, 816, 1062, 1149, 2024, 2702
MboI GATC 9 cut(s) 25, 50, 308, 779, 814, 1060, 1147, 2022, 2700
MfeI CAATTG 2 cut(s) 204, 2413
MflI RGATCY 7 cut(s) 25, 50, 308, 779, 814, 1060, 1147
MhlI GDGCHC 4 cut(s) 66, 1900, 2847, 2865
MlyI GAGTC 6 cut(s) 164, 509, 575, 797, 920, 2248
MmeI TCCRAC 1 cut(s) 753
Mph1103I ATGCAT 1 cut(s) 1592
MslI CAYNNNNRTG 3 cut(s) 36, 1786, 2868
MspA1I CMGCKG 1 cut(s) 2228
MspI CCGG 3 cut(s) 302, 3321, 3485
MunI CAATTG 2 cut(s) 204, 2413
MwoI GCNNNNNNNGC 4 cut(s) 650, 2100, 2225, 3092
NciI CCSGG 1 cut(s) 302
NcoI CCATGG 1 cut(s) 2847
NdeII GATC 9 cut(s) 25, 50, 308, 779, 814, 1060, 1147, 2022, 2700
NheI GCTAGC 1 cut(s) 104
NlaIV GGNNCC 6 cut(s) 52, 568, 709, 816, 1551, 3357
NmuCI GTSAC 7 cut(s) 95, 481, 578, 715, 947, 1634, 2458
NsiI ATGCAT 1 cut(s) 1592
NspI RCATGY 3 cut(s) 1706, 2787, 3071
PceI AGGCCT 1 cut(s) 2195
PciI ACATGT 2 cut(s) 2783, 3067
PciSI GCTCTTC 1 cut(s) 2835
PflMI CCANNNNNTGG 2 cut(s) 963, 1705
PfoI TCCNGGA 5 cut(s) 300, 2240, 2719, 2776, 3240
PkrI GCNGC 6 cut(s) 546, 862, 1011, 1886, 2617, 2971
PleI GAGTC 6 cut(s) 163, 508, 575, 797, 919, 2248
PpsI GAGTC 6 cut(s) 163, 508, 575, 797, 919, 2248
Ppu21I YACGTR 1 cut(s) 641
PscI ACATGT 2 cut(s) 2783, 3067
PshBI ATTAAT 2 cut(s) 1044, 1236
PsiI TTATAA 1 cut(s) 255
Psp124BI GAGCTC 1 cut(s) 1900
PspEI GGTNACC 2 cut(s) 1604, 1634
PspFI CCCAGC 4 cut(s) 1420, 1444, 1698, 1997
PspN4I GGNNCC 6 cut(s) 52, 568, 709, 816, 1551, 3357
PspPI GGNCC 5 cut(s) 287, 567, 1035, 2643, 2981
PsrI GAACNNNNNNTAC 4 cut(s) 1959, 1991, 2773, 2805
PstI CTGCAG 4 cut(s) 865, 1014, 1461, 2382
PstNI CAGNNNCTG 3 cut(s) 1112, 1361, 2123
PsuI RGATCY 7 cut(s) 25, 50, 308, 779, 814, 1060, 1147
PvuII CAGCTG 1 cut(s) 2228
RsaI GTAC 7 cut(s) 1475, 2112, 2384, 2926, 2992, 3060, 3418
RsaNI GTAC 7 cut(s) 1474, 2111, 2383, 2925, 2991, 3059, 3417
RseI CAYNNNNRTG 3 cut(s) 36, 1786, 2868
SacI GAGCTC 1 cut(s) 1900
SapI GCTCTTC 1 cut(s) 2835
SatI GCNGC 6 cut(s) 545, 861, 1010, 1885, 2616, 2970
Sau3AI GATC 9 cut(s) 25, 50, 308, 779, 814, 1060, 1147, 2022, 2700
Sau96I GGNCC 5 cut(s) 287, 567, 1035, 2643, 2981
ScaI AGTACT 3 cut(s) 2112, 2384, 3418
SchI GAGTC 6 cut(s) 164, 509, 575, 797, 920, 2248
SduI GDGCHC 4 cut(s) 66, 1900, 2847, 2865
SexAI ACCWGGT 1 cut(s) 391
SfaNI GCATC 8 cut(s) 1012, 1977, 1984, 2493, 2568, 2782, 3031, 3202
SfcI CTRYAG 7 cut(s) 459, 702, 861, 1010, 1457, 2378, 3255
SinI GGWCC 4 cut(s) 287, 1035, 2643, 2981
SmiMI CAYNNNNRTG 3 cut(s) 36, 1786, 2868
SmlI CTYRAG 2 cut(s) 2256, 2735
SmoI CTYRAG 2 cut(s) 2256, 2735
SseBI AGGCCT 1 cut(s) 2195
SsiI CCGC 8 cut(s) 312, 743, 883, 967, 2251, 2301, 3197, 3351
SspI AATATT 2 cut(s) 1042, 1576
SstI GAGCTC 1 cut(s) 1900
StuI AGGCCT 1 cut(s) 2195
StyI CCWWGG 2 cut(s) 2799, 2847
TaiI ACGT 2 cut(s) 591, 643
TaqI TCGA 6 cut(s) 498, 506, 1629, 1861, 2527, 3231
TaqII GACCGA 1 cut(s) 2660
TatI WGTACW 4 cut(s) 2110, 2382, 3058, 3416
TscAI CASTG 5 cut(s) 199, 486, 1606, 2110, 3083
TseFI GTSAC 7 cut(s) 95, 481, 578, 715, 947, 1634, 2458
TseI GCWGC 6 cut(s) 544, 860, 1009, 1884, 2615, 2969
Tsp45I GTSAC 7 cut(s) 95, 481, 578, 715, 947, 1634, 2458
TspRI CASTG 5 cut(s) 199, 486, 1606, 2110, 3083
Van91I CCANNNNNTGG 2 cut(s) 963, 1705
VneI GTGCAC 1 cut(s) 2861
VpaK11BI GGWCC 4 cut(s) 287, 1035, 2643, 2981
VspI ATTAAT 2 cut(s) 1044, 1236
XagI CCTNNNNNAGG 1 cut(s) 396
XapI RAATTY 5 cut(s) 279, 1081, 2912, 3235, 3245
XbaI TCTAGA 4 cut(s) 272, 1784, 1871, 1892
XceI RCATGY 3 cut(s) 1706, 2787, 3071
XcmI CCANNNNNNNNNTGG 2 cut(s) 1706, 2626
ZrmI AGTACT 3 cut(s) 2112, 2384, 3418
Zsp2I ATGCAT 1 cut(s) 1592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.