Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005696

Physical Location & Seq

Genomic Coordinates Reverse (-)

34600364 .. 34608885

Gene Structure 8522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g41120.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGCTCGGTGCTACAGCATCGAGGCTATACAGAGTCACCGGCCTTCTCCTCCGCTCCCAAAAGCCCCATCAAAGCCGCAACCTTTCCTCTCTCTCCTTCCCCAATTCCAGAACCACCTCCTTCCATGGAAACCCTATCTTTCTTCCTCATTTTCCCACAAGAACCAGACTCATTCCTCTCCAAGTCAACGCTTTCGTCCCCGGCGCCTCCTCCGCCGCGTCTCCGCCGAACGGCCGGGCGTGTCTATCCACTTCGGCGCCGGACAAGTCCAATCCGCGGCCGTTCGTACCGAAGAAGACTCCCGACGAGCAAGTTGGCGACGTCCAGATCTTCCGGACTCTGGCTAGTTACTTGTGGATGAAAGATAACTATGAGTTCCGGCTTAGGGTTTTGACTGCGTTGGGGTTTTTGGTTGGGGCGAAGGTGCTCAATGTTCAGGTGCCGTTTCTGTTCAAGCTCGCTGTTGACTGGTTGACCACGGCTACCGGGAGTGCCGGTTCTTTTGCGGCGTTTTCTGCCGCTAATCCGACTCAGCTGGCGCTTTTCGCAACTCCGGCGTCGGTTTTGATTGGGTATGGGATTGCACGCTCCGGCGCTTCTGCTTTCAACGAATTGAGGACTGCTGTGTTTTCTAAGGTGGCATTGCGAACAATCCGATCAGTTTCCAGGAAGGTCTTCTCACATTTGCATGACCTTGATCTTCGATATCATCTTAATCGAGAAACTGGCGCTCTAAATCGAATAATTGATCGTGGTAGCCGTGCTATAAATTTCATTCTCTCGTCTATGGTATTCAATGTTGTACCCACCATCTTAGAGATATCTATGGTTTCGGGTATACTGGCTTACAAATTTGGAGCGCCTTTTGCATGGATTACATCACTATCAGTTGCTGCATATATTGCATTTACATTGACTGTTACACAGTGGAGGACGAAGTTCAGGAAGGCCATGAATAAGGCCGACAATGATGCTAGTACAAGGGCAATTGATTCACTTATTAATTATGAGACTGTCAAATATTTCAACAATGAAGGGTTCGAAGCTGATAAGTATGACAAATACTTAAAGAGGTATGAAGATGCTGCCTTAAAAACACAACGTAGTCTTGCTTTTCTGAACTTTGGCCAAAGTATCATATTCAGCACAGCTTTATCAACGGCTATGGTGCTGTGCTCAAATGGTATTATGAATGGCAGTATGACAGTCGGCGATTTGGTCATGGTGAATGGGCTTCTATTCCAGCTATCACTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACCATACAGAGCCTTGTTGACATGAAATCCATGTTTCAGTTACTGGAGGAAAGGGCTGAAATTAGAGACAAAGATGATGCAAAGCCTTTGCACCTAAGCGGGGGGAGCATTCAGTTTGAAAACGTGCATTTCAGTTACCTACCGGAAAGAAAGATTCTTGATGGGATATCATTTGTTGTACCTGCTGGAAAGAGTGTGGCTATTGTTGGAACCAGCGGCAGTGGAAAGTCAACCATTCTCAGATTGCTGTTCAGATTTTTTGACACCCATTCCGGAAGTATAAGGATAGACGGTCAAGATATTAGGGATGTGACTCTTGAGAGTGTGCGGAACTGTATTGGAGTTGTGCCGCAAGATACTGTACTTTTCAATGACACAATATACCACAACATTCACTATGGCCGTCTTTCAGCGACAAAAGAAGAGGTGTATGAAGCTGCTCGACGTGCAGCAATACATGACACTATCATGAACTTTCCCGACAGATATTCTACTGAAGTGGGGGAACGGGGGCTCAAGTTAAGTGGTGGGGAGAAGCAGCGCGTGGCACTGGCTCGAGCATTCTTGAAAGCACCTCCAATTCTGTTATGTGATGAAGCTACAAGTGCACTAGATAGCACCACAGAAGCAGAAATATTAAGTGCATTGAAATCCTTGGCAACCAACCGAACTTCAGTTTTCATTGCTCATAGGCTGACTACTGCAATGCAGTGTGATGAGATAATAGTTCTGGAGAATGGGCAAGTGGTTGAGCAGGGACCCCATGATGTTCTCTTGTCTAAGGCAGGAAGATATGCACAGCTCTGGGGACAGCAAAATAACACAATTGATGCTCTTGATGCCACCATTAAAATGGGGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006777 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006875 GO:0006879 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009657 GO:0009658 GO:0009889 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010288 GO:0010380 GO:0016020 GO:0016043 GO:0018130 GO:0019222 GO:0019538 GO:0019637 GO:0019720 GO:0019725 GO:0019866 GO:0022622 GO:0030003 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046916 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051186 GO:0051188 GO:0051189 GO:0051193 GO:0051276 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071840 GO:0090056 GO:0090407 GO:0098771 GO:0099402 GO:1901360 GO:1901362 GO:1901401 GO:1901463 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

717

Amino Acids

78.91

Weight (kDa)

9.41

Isoelectric Point (pI)

27.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	133 - 419	5.2e-38	ABC transporter transmembrane region
ABC_tran	PF00005	482 - 587	1e-18	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28620 AT4G28630 AT5G58270
fragaria_vesca	FvH4_3g41120 FvH4_3g41120 FvH4_3g41120 FvH4_3g41120
malus_domestica	MD03G1047300.v1.1 MD11G1049800.v1.1
prunus_persica	Prupe.6G038500_v2.0.a1
pyrus_communis	pycom03g03730 pycom11g04040
rosa_chinensis	RchiOBHm_Chr5g0073901 RchiOBHm_Chr5g0073961
rosa_laevigata	RLG00000036423
rosa_multiflora	Rmu_sc0000470.1_g000016 Rmu_sc0000470.1_g000034
rosa_roxburghii	Rroxscaffold_1G00007470
rosa_rugosa	Rorug05G0427200
rosa_samantha	Rh5AG484200 Rh5AG484700 Rh5BG504900 Rh5BG505300 Rh5CG528700 Rh5CG529100 Rh5DG517200
rosa_wichuraiana	Rw0G006220 Rw5G045010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	324
Acc36I	ACCTGC	1 cut(s)	1477
AccB1I	GGYRCC	3 cut(s)	203, 256, 439
AccBSI	CCGCTC	1 cut(s)	54
AccI	GTMKAC	1 cut(s)	838
AccII	CGCG	3 cut(s)	218, 277, 1830
AccIII	TCCGGA	2 cut(s)	333, 1559
AcoI	YGGCCR	4 cut(s)	232, 278, 1126, 1687
AcsI	RAATTY	2 cut(s)	769, 851
AcuI	CTGAAG	2 cut(s)	1803, 1944
AcyI	GRCGYC	4 cut(s)	204, 257, 321, 557
AfaI	GTAC	5 cut(s)	288, 804, 979, 1467, 1650
AfiI	CCNNNNNNNGG	5 cut(s)	230, 276, 340, 385, 1387
AgsI	TTSAA	8 cut(s)	454, 607, 796, 1027, 1406, 1657, 1855, 1936
AjiI	CACGTC	1 cut(s)	1733
AjnI	CCWGG	1 cut(s)	665
AloI	GAACNNNNNNTCC	2 cut(s)	481, 513
AluBI	AGCT	8 cut(s)	457, 535, 1046, 1151, 1246, 1724, 1886, 2089
AluI	AGCT	8 cut(s)	457, 535, 1046, 1151, 1246, 1724, 1886, 2089
Alw21I	GWGCWC	3 cut(s)	429, 1178, 1897
Alw26I	GTCTC	4 cut(s)	225, 1004, 1280, 1347
Alw44I	GTGCAC	1 cut(s)	1893
AlwNI	CAGNNNCTG	2 cut(s)	893, 1330
Ama87I	CYCGRG	1 cut(s)	1842
Aor13HI	TCCGGA	2 cut(s)	333, 1559
AoxI	GGCC	7 cut(s)	40, 232, 278, 948, 960, 1126, 1687
ApaLI	GTGCAC	1 cut(s)	1893
ApeKI	GCWGC	5 cut(s)	893, 1085, 1724, 1736, 1825
ApoI	RAATTY	2 cut(s)	769, 851
AseI	ATTAAT	1 cut(s)	1002
Asp700I	GAANNNNTTC	1 cut(s)	674
AspLEI	GCGC	7 cut(s)	206, 259, 541, 596, 731, 862, 1830
AspS9I	GGNCC	1 cut(s)	2045
AsuC2I	CCSGG	3 cut(s)	201, 236, 487
AsuHPI	GGTGA	2 cut(s)	28, 1237
AsuII	TTCGAA	1 cut(s)	1041
AvaI	CYCGRG	1 cut(s)	1842
AvaII	GGWCC	1 cut(s)	2045
BaeGI	GKGCMC	1 cut(s)	1897
BalI	TGGCCA	1 cut(s)	1128
BanI	GGYRCC	3 cut(s)	203, 256, 439
BanII	GRGCYC	1 cut(s)	1803
BbsI	GAAGAC	2 cut(s)	302, 667
Bbv12I	GWGCWC	3 cut(s)	429, 1178, 1897
BbvI	GCAGC	5 cut(s)	880, 1072, 1711, 1748, 1837
BccI	CCATC	3 cut(s)	75, 818, 1442
BceAI	ACGGC	7 cut(s)	247, 265, 427, 495, 744, 1176, 1674
BcgI	CGANNNNNNTGC	2 cut(s)	953, 987
BciT130I	CCWGG	1 cut(s)	667
BcnI	CCSGG	3 cut(s)	201, 236, 487
BcoDI	GTCTC	4 cut(s)	225, 1004, 1280, 1347
BfaI	CTAG	3 cut(s)	345, 975, 1898
BfmI	CTRYAG	1 cut(s)	12
BfoI	RGCGCY	6 cut(s)	207, 260, 542, 597, 732, 863
BfuAI	ACCTGC	1 cut(s)	1477
BglII	AGATCT	1 cut(s)	327
Bme1390I	CCNGG	4 cut(s)	201, 236, 487, 667
Bme18I	GGWCC	1 cut(s)	2045
BmeT110I	CYCGRG	1 cut(s)	1842
BmgBI	CACGTC	1 cut(s)	1733
BmgT120I	GGNCC	1 cut(s)	2045
BmiI	GGNNCC	6 cut(s)	205, 258, 441, 1498, 2046, 2047
BmrFI	CCNGG	4 cut(s)	201, 236, 487, 667
BmsI	GCATC	6 cut(s)	26, 961, 1072, 1354, 2107, 2116
BpiI	GAAGAC	2 cut(s)	302, 667
BpmI	CTGGAG	2 cut(s)	1352, 2039
Bpu10I	CCTNAGC	2 cut(s)	383, 1382
Bpu14I	TTCGAA	1 cut(s)	1041
BpuEI	CTTGAG	2 cut(s)	1625, 1787
BpuMI	CCSGG	3 cut(s)	201, 236, 487
BsaHI	GRCGYC	4 cut(s)	204, 257, 321, 557
BsaI	GGTCTC	1 cut(s)	1280
BsaJI	CCNNGG	6 cut(s)	124, 199, 275, 477, 1267, 1941
BsaWI	WCCGGW	3 cut(s)	333, 1429, 1559
BsaXI	ACNNNNNCTCC	2 cut(s)	481, 511
Bsc4I	CCNNNNNNNGG	5 cut(s)	230, 276, 340, 385, 1387
Bse118I	RCCGGY	2 cut(s)	38, 494
Bse1I	ACTGG	5 cut(s)	473, 730, 846, 1335, 1842
Bse3DI	GCAATG	3 cut(s)	641, 1968, 1998
BseAI	TCCGGA	2 cut(s)	333, 1559
BseBI	CCWGG	1 cut(s)	667
BseDI	CCNNGG	6 cut(s)	124, 199, 275, 477, 1267, 1941
BseGI	GGATG	2 cut(s)	363, 1600
BseLI	CCNNNNNNNGG	5 cut(s)	230, 276, 340, 385, 1387
BseMI	GCAATG	3 cut(s)	641, 1968, 1998
BseMII	CTCAG	2 cut(s)	545, 1540
BseNI	ACTGG	5 cut(s)	473, 730, 846, 1335, 1842
BseRI	GAGGAG	2 cut(s)	38, 199
BseSI	GKGCMC	1 cut(s)	1897
BseX3I	CGGCCG	2 cut(s)	232, 278
BseXI	GCAGC	5 cut(s)	880, 1072, 1711, 1748, 1837
BsgI	GTGCAG	1 cut(s)	1755
Bsh1236I	CGCG	3 cut(s)	218, 277, 1830
Bsh1285I	CGRYCG	2 cut(s)	235, 281
BshFI	GGCC	7 cut(s)	42, 234, 280, 950, 962, 1128, 1689
BshNI	GGYRCC	3 cut(s)	203, 256, 439
BsiEI	CGRYCG	2 cut(s)	235, 281
BsiHKAI	GWGCWC	3 cut(s)	429, 1178, 1897
BsiHKCI	CYCGRG	1 cut(s)	1842
BslFI	GGGAC	3 cut(s)	182, 2058, 2109
BslI	CCNNNNNNNGG	5 cut(s)	230, 276, 340, 385, 1387
BsmAI	GTCTC	4 cut(s)	225, 1004, 1280, 1347
BsmBI	CGTCTC	1 cut(s)	225
BsmFI	GGGAC	3 cut(s)	182, 2058, 2109
BsmI	GAATGC	2 cut(s)	1395, 1847
BsnI	GGCC	7 cut(s)	42, 234, 280, 950, 962, 1128, 1689
Bso31I	GGTCTC	1 cut(s)	1280
BsoBI	CYCGRG	1 cut(s)	1842
Bsp119I	TTCGAA	1 cut(s)	1041
Bsp1286I	GDGCHC	4 cut(s)	429, 1178, 1803, 1897
Bsp13I	TCCGGA	2 cut(s)	333, 1559
Bsp143I	GATC	4 cut(s)	327, 656, 697, 748
Bsp19I	CCATGG	1 cut(s)	124
BspANI	GGCC	7 cut(s)	42, 234, 280, 950, 962, 1128, 1689
BspCNI	CTCAG	2 cut(s)	544, 1539
BspEI	TCCGGA	2 cut(s)	333, 1559
BspFNI	CGCG	3 cut(s)	218, 277, 1830
BspHI	TCATGA	1 cut(s)	1755
BspLI	GGNNCC	6 cut(s)	205, 258, 441, 1498, 2046, 2047
BspMI	ACCTGC	1 cut(s)	1477
BspT104I	TTCGAA	1 cut(s)	1041
BspT107I	GGYRCC	3 cut(s)	203, 256, 439
BspTNI	GGTCTC	1 cut(s)	1280
BsrBI	CCGCTC	1 cut(s)	54
BsrDI	GCAATG	3 cut(s)	641, 1968, 1998
BsrFI	RCCGGY	2 cut(s)	38, 494
BsrI	ACTGG	5 cut(s)	473, 730, 846, 1335, 1842
BssAI	RCCGGY	2 cut(s)	38, 494
BssECI	CCNNGG	6 cut(s)	124, 199, 275, 477, 1267, 1941
BssMI	GATC	4 cut(s)	327, 656, 697, 748
BssNAI	GTATAC	1 cut(s)	839
BssNI	GRCGYC	4 cut(s)	204, 257, 321, 557
BssT1I	CCWWGG	3 cut(s)	124, 1267, 1941
Bst1107I	GTATAC	1 cut(s)	839
Bst2UI	CCWGG	1 cut(s)	667
Bst4CI	ACNGT	7 cut(s)	919, 927, 1015, 1207, 1580, 1622, 1648
Bst6I	CTCTTC	1 cut(s)	1704
BstACI	GRCGYC	4 cut(s)	204, 257, 321, 557
BstAPI	GCANNNNNTGC	1 cut(s)	902
BstBI	TTCGAA	1 cut(s)	1041
BstC8I	GCNNGC	3 cut(s)	459, 537, 586
BstDEI	CTNAG	7 cut(s)	383, 531, 633, 814, 1382, 1526, 2067
BstDSI	CCRYGG	3 cut(s)	124, 275, 477
BstF5I	GGATG	2 cut(s)	363, 1600
BstFNI	CGCG	3 cut(s)	218, 277, 1830
BstH2I	RGCGCY	6 cut(s)	207, 260, 542, 597, 732, 863
BstHHI	GCGC	7 cut(s)	206, 259, 541, 596, 731, 862, 1830
BstKTI	GATC	4 cut(s)	330, 659, 700, 751
BstMAI	GTCTC	4 cut(s)	225, 1004, 1280, 1347
BstMBI	GATC	4 cut(s)	327, 656, 697, 748
BstMCI	CGRYCG	2 cut(s)	235, 281
BstNI	CCWGG	1 cut(s)	667
BstSCI	CCNGG	4 cut(s)	199, 234, 485, 665
BstSFI	CTRYAG	1 cut(s)	12
BstSLI	GKGCMC	1 cut(s)	1897
BstUI	CGCG	3 cut(s)	218, 277, 1830
BstV1I	GCAGC	5 cut(s)	880, 1072, 1711, 1748, 1837
BstV2I	GAAGAC	2 cut(s)	302, 667
BstX2I	RGATCY	1 cut(s)	327
BstXI	CCANNNNNNTGG	1 cut(s)	2140
BstYI	RGATCY	1 cut(s)	327
BstZ17I	GTATAC	1 cut(s)	839
BstZI	CGGCCG	2 cut(s)	232, 278
BsuRI	GGCC	7 cut(s)	42, 234, 280, 950, 962, 1128, 1689
BtgI	CCRYGG	3 cut(s)	124, 275, 477
BtrI	CACGTC	1 cut(s)	1733
BtsCI	GGATG	2 cut(s)	363, 1600
BtsI	GCAGTG	2 cut(s)	1513, 2003
BtsIMutI	CAGTG	4 cut(s)	932, 1513, 1835, 2003
BveI	ACCTGC	1 cut(s)	1477
Cac8I	GCNNGC	3 cut(s)	459, 537, 586
CaiI	CAGNNNCTG	2 cut(s)	893, 1330
CciI	TCATGA	1 cut(s)	1755
CfoI	GCGC	7 cut(s)	206, 259, 541, 596, 731, 862, 1830
Cfr10I	RCCGGY	2 cut(s)	38, 494
Cfr13I	GGNCC	1 cut(s)	2045
Cfr42I	CCGCGG	1 cut(s)	278
CseI	GACGC	2 cut(s)	207, 546
Csp6I	GTAC	5 cut(s)	287, 803, 978, 1466, 1649
CspCI	CAANNNNNGTGG	2 cut(s)	1792, 1827
CviQI	GTAC	5 cut(s)	287, 803, 978, 1466, 1649
DdeI	CTNAG	7 cut(s)	383, 531, 633, 814, 1382, 1526, 2067
DinI	GGCGCC	2 cut(s)	205, 258
DpnI	GATC	4 cut(s)	329, 658, 699, 750
DpnII	GATC	4 cut(s)	327, 656, 697, 748
EaeI	YGGCCR	4 cut(s)	232, 278, 1126, 1687
EagI	CGGCCG	2 cut(s)	232, 278
Eam1104I	CTCTTC	1 cut(s)	1704
EarI	CTCTTC	1 cut(s)	1704
EciI	GGCGGA	2 cut(s)	202, 213
EclXI	CGGCCG	2 cut(s)	232, 278
Eco130I	CCWWGG	3 cut(s)	124, 1267, 1941
Eco24I	GRGCYC	1 cut(s)	1803
Eco31I	GGTCTC	1 cut(s)	1280
Eco32I	GATATC	3 cut(s)	707, 822, 1455
Eco47I	GGWCC	1 cut(s)	2045
Eco52I	CGGCCG	2 cut(s)	232, 278
Eco57I	CTGAAG	2 cut(s)	1803, 1944
Eco88I	CYCGRG	1 cut(s)	1842
EcoO109I	RGGNCCY	1 cut(s)	2045
EcoRII	CCWGG	1 cut(s)	665
EcoRV	GATATC	3 cut(s)	707, 822, 1455
EcoT14I	CCWWGG	3 cut(s)	124, 1267, 1941
EcoT38I	GRGCYC	1 cut(s)	1803
EgeI	GGCGCC	2 cut(s)	205, 258
EheI	GGCGCC	2 cut(s)	205, 258
ErhI	CCWWGG	3 cut(s)	124, 1267, 1941
Esp3I	CGTCTC	1 cut(s)	225
FaqI	GGGAC	3 cut(s)	182, 2058, 2109
FauI	CCCGC	1 cut(s)	1379
FblI	GTMKAC	1 cut(s)	838
FokI	GGATG	2 cut(s)	370, 1607
FriOI	GRGCYC	1 cut(s)	1803
FspBI	CTAG	3 cut(s)	345, 975, 1898
GlaI	GCGC	7 cut(s)	205, 258, 540, 595, 730, 861, 1829
GsuI	CTGGAG	2 cut(s)	1352, 2039
HaeII	RGCGCY	6 cut(s)	207, 260, 542, 597, 732, 863
HaeIII	GGCC	7 cut(s)	42, 234, 280, 950, 962, 1128, 1689
HgaI	GACGC	2 cut(s)	207, 546
HhaI	GCGC	7 cut(s)	206, 259, 541, 596, 731, 862, 1830
Hin1I	GRCGYC	4 cut(s)	204, 257, 321, 557
Hin6I	GCGC	7 cut(s)	204, 257, 539, 594, 729, 860, 1828
HinP1I	GCGC	7 cut(s)	204, 257, 539, 594, 729, 860, 1828
HincII	GTYRAC	5 cut(s)	187, 466, 474, 1306, 1518
HindII	GTYRAC	5 cut(s)	187, 466, 474, 1306, 1518
HinfI	GANTC	8 cut(s)	33, 168, 298, 337, 529, 992, 1441, 1600
HphI	GGTGA	2 cut(s)	28, 1237
Hpy166II	GTNNAC	7 cut(s)	187, 466, 474, 839, 1306, 1518, 1895
Hpy188I	TCNGA	5 cut(s)	528, 656, 1119, 1529, 1541
Hpy8I	GTNNAC	7 cut(s)	187, 466, 474, 839, 1306, 1518, 1895
Hpy99I	CGWCG	4 cut(s)	308, 323, 562, 1734
HpyAV	CCTTC	7 cut(s)	53, 106, 130, 415, 664, 940, 1028
HpyCH4III	ACNGT	7 cut(s)	919, 927, 1015, 1207, 1580, 1622, 1648
HpyCH4IV	ACGT	4 cut(s)	321, 1102, 1410, 1732
HpyF3I	CTNAG	7 cut(s)	383, 531, 633, 814, 1382, 1526, 2067
HpySE526I	ACGT	4 cut(s)	321, 1102, 1410, 1732
Hsp92I	GRCGYC	4 cut(s)	204, 257, 321, 557
HspAI	GCGC	7 cut(s)	204, 257, 539, 594, 729, 860, 1828
KasI	GGCGCC	2 cut(s)	203, 256
KflI	GGGWCCC	1 cut(s)	2045
Kpn2I	TCCGGA	2 cut(s)	333, 1559
KspI	CCGCGG	1 cut(s)	278
Kzo9I	GATC	4 cut(s)	327, 656, 697, 748
LmnI	GCTCC	4 cut(s)	59, 593, 857, 1392
Lsp1109I	GCAGC	5 cut(s)	880, 1072, 1711, 1748, 1837
LweI	GCATC	6 cut(s)	26, 961, 1072, 1354, 2107, 2116
MaeI	CTAG	3 cut(s)	345, 975, 1898
MaeII	ACGT	4 cut(s)	321, 1102, 1410, 1732
MaeIII	GTNAC	6 cut(s)	34, 347, 919, 1326, 1421, 1597
MalI	GATC	4 cut(s)	329, 658, 699, 750
MbiI	CCGCTC	1 cut(s)	54
MboI	GATC	4 cut(s)	327, 656, 697, 748
MboII	GAAGA	9 cut(s)	134, 304, 307, 322, 667, 692, 1091, 1721, 2088
MfeI	CAATTG	2 cut(s)	987, 2112
MflI	RGATCY	1 cut(s)	327
MhlI	GDGCHC	4 cut(s)	429, 1178, 1803, 1897
MlsI	TGGCCA	1 cut(s)	1128
MluNI	TGGCCA	1 cut(s)	1128
Mly113I	GGCGCC	2 cut(s)	204, 257
MlyI	GAGTC	6 cut(s)	42, 162, 292, 331, 523, 1594
MmeI	TCCRAC	2 cut(s)	551, 1474
Mox20I	TGGCCA	1 cut(s)	1128
MroI	TCCGGA	2 cut(s)	333, 1559
MroXI	GAANNNNTTC	1 cut(s)	674
MscI	TGGCCA	1 cut(s)	1128
MseI	TTAA	7 cut(s)	714, 1002, 1067, 1091, 1808, 1925, 2136
MslI	CAYNNNNRTG	3 cut(s)	687, 1754, 2138
Msp20I	TGGCCA	1 cut(s)	1128
MspA1I	CMGCKG	3 cut(s)	277, 535, 1503
MspR9I	CCNGG	4 cut(s)	201, 236, 487, 667
MunI	CAATTG	2 cut(s)	987, 2112
Mva1269I	GAATGC	2 cut(s)	1395, 1847
MvaI	CCWGG	1 cut(s)	667
MvnI	CGCG	3 cut(s)	218, 277, 1830
NarI	GGCGCC	2 cut(s)	204, 257
NciI	CCSGG	3 cut(s)	201, 236, 487
NcoI	CCATGG	1 cut(s)	124
NdeII	GATC	4 cut(s)	327, 656, 697, 748
NlaIV	GGNNCC	6 cut(s)	205, 258, 441, 1498, 2046, 2047
NmuCI	GTSAC	2 cut(s)	34, 1597
NspV	TTCGAA	1 cut(s)	1041
PaeR7I	CTCGAG	1 cut(s)	1842
PagI	TCATGA	1 cut(s)	1755
PcsI	WCGNNNNNNNCGW	1 cut(s)	757
PctI	GAATGC	2 cut(s)	1395, 1847
PdmI	GAANNNNTTC	1 cut(s)	674
PfeI	GAWTC	2 cut(s)	992, 1441
PfoI	TCCNGGA	1 cut(s)	665
PleI	GAGTC	6 cut(s)	41, 162, 292, 331, 523, 1594
PluTI	GGCGCC	2 cut(s)	207, 260
PpsI	GAGTC	6 cut(s)	41, 162, 292, 331, 523, 1594
PpuMI	RGGWCCY	1 cut(s)	2045
PshBI	ATTAAT	1 cut(s)	1002
Psp5II	RGGWCCY	1 cut(s)	2045
Psp6I	CCWGG	1 cut(s)	665
PspGI	CCWGG	1 cut(s)	665
PspN4I	GGNNCC	6 cut(s)	205, 258, 441, 1498, 2046, 2047
PspPI	GGNCC	1 cut(s)	2045
PspPPI	RGGWCCY	1 cut(s)	2045
PspXI	VCTCGAGB	1 cut(s)	1842
PstNI	CAGNNNCTG	2 cut(s)	893, 1330
PsuI	RGATCY	1 cut(s)	327
PvuII	CAGCTG	1 cut(s)	535
RsaI	GTAC	5 cut(s)	288, 804, 979, 1467, 1650
RsaNI	GTAC	5 cut(s)	287, 803, 978, 1466, 1649
RseI	CAYNNNNRTG	3 cut(s)	687, 1754, 2138
SacII	CCGCGG	1 cut(s)	278
SaqAI	TTAA	7 cut(s)	714, 1002, 1067, 1091, 1808, 1925, 2136
Sau3AI	GATC	4 cut(s)	327, 656, 697, 748
Sau96I	GGNCC	1 cut(s)	2045
SchI	GAGTC	6 cut(s)	42, 162, 292, 331, 523, 1594
ScrFI	CCNGG	4 cut(s)	201, 236, 487, 667
SduI	GDGCHC	4 cut(s)	429, 1178, 1803, 1897
SfaNI	GCATC	6 cut(s)	26, 961, 1072, 1354, 2107, 2116
SfcI	CTRYAG	1 cut(s)	12
SfoI	GGCGCC	2 cut(s)	205, 258
Sfr274I	CTCGAG	1 cut(s)	1842
Sfr303I	CCGCGG	1 cut(s)	278
SfuI	TTCGAA	1 cut(s)	1041
SgrBI	CCGCGG	1 cut(s)	278
SinI	GGWCC	1 cut(s)	2045
SlaI	CTCGAG	1 cut(s)	1842
SmiMI	CAYNNNNRTG	3 cut(s)	687, 1754, 2138
SmlI	CTYRAG	3 cut(s)	1604, 1802, 1842
SmoI	CTYRAG	3 cut(s)	1604, 1802, 1842
SspDI	GGCGCC	2 cut(s)	203, 256
SspI	AATATT	2 cut(s)	1022, 1923
SspMI	CTAG	3 cut(s)	345, 975, 1898
StyD4I	CCNGG	4 cut(s)	199, 234, 485, 665
StyI	CCWWGG	3 cut(s)	124, 1267, 1941
TaaI	ACNGT	7 cut(s)	919, 927, 1015, 1207, 1580, 1622, 1648
TaiI	ACGT	4 cut(s)	324, 1105, 1413, 1735
TaqI	TCGA	7 cut(s)	20, 703, 718, 739, 1041, 1729, 1843
TatI	WGTACW	2 cut(s)	977, 1648
TauI	GCSGC	7 cut(s)	78, 218, 280, 509, 521, 1506, 1639
TfiI	GAWTC	2 cut(s)	992, 1441
Tru1I	TTAA	7 cut(s)	714, 1002, 1067, 1091, 1808, 1925, 2136
Tru9I	TTAA	7 cut(s)	714, 1002, 1067, 1091, 1808, 1925, 2136
TscAI	CASTG	4 cut(s)	932, 1513, 1842, 2003
TseFI	GTSAC	2 cut(s)	34, 1597
TseI	GCWGC	5 cut(s)	893, 1085, 1724, 1736, 1825
Tsp45I	GTSAC	2 cut(s)	34, 1597
TspRI	CASTG	4 cut(s)	932, 1513, 1842, 2003
VneI	GTGCAC	1 cut(s)	1893
VpaK11BI	GGWCC	1 cut(s)	2045
VspI	ATTAAT	1 cut(s)	1002
XapI	RAATTY	2 cut(s)	769, 851
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2137
XhoI	CTCGAG	1 cut(s)	1842
XmiI	GTMKAC	1 cut(s)	838
XmnI	GAANNNNTTC	1 cut(s)	674
XspI	CTAG	3 cut(s)	345, 975, 1898
ZraI	GACGTC	1 cut(s)	322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.