Rh5CG529100

ABC transporter B family member 25

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
73997049 .. 74004005
6957 bp
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UTR
Exon/CDS
Intron
Rh5CG529100.1

Sequence Viewer

Length: 366 bp
ATGCATCCTAAGCGGCCTGTCAACCTGATAAGGATAGACGGTCAAGATATTCGAAATGTGACACTTGAGAGTTTGCGGAACTGTATTGGAGTTGTGCCGCAAGATACAGTGTCTGAAGCTGCTCGACGTGCAGCAATACATGATACTATCATGAACTTTCCCGACAGATATTCTACTGAAGTGGGGGAACGGGGGCTCAAGATAATAGTTGTGGACAATGGGCAAGTGGTTGAGCAGGGACTCCATGATGTTCTCTATTCCAAGGCAGGAAGATATGCACAGCTCTGGGGACAGCAAAATAACACAATTGATGCACTTGATGCGACAATTGATACAAATAAGTTTTGCTCAAAATTTGCAAATTAG

Protein Analysis

121

Amino Acids

13.54

Weight (kDa)

6.27

Isoelectric Point (pI)

33.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 13, 76, 98
AcsI RAATTY 1 cut(s) 353
AcuI CTGAAG 2 cut(s) 135, 198
AjiI CACGTC 1 cut(s) 128
AluBI AGCT 2 cut(s) 119, 283
AluI AGCT 2 cut(s) 119, 283
AlwNI CAGNNNCTG 1 cut(s) 113
AoxI GGCC 1 cut(s) 14
ApeKI GCWGC 2 cut(s) 119, 131
ApoI RAATTY 1 cut(s) 353
AsuII TTCGAA 1 cut(s) 52
BanII GRGCYC 1 cut(s) 198
BbvI GCAGC 2 cut(s) 106, 143
BisI GCNGC 4 cut(s) 14, 98, 120, 132
BlsI GCNGC 4 cut(s) 15, 99, 121, 133
BmgBI CACGTC 1 cut(s) 128
BmsI GCATC 3 cut(s) 13, 301, 310
Bpu10I CCTNAGC 1 cut(s) 9
Bpu14I TTCGAA 1 cut(s) 52
BpuEI CTTGAG 2 cut(s) 86, 182
BsaJI CCNNGG 1 cut(s) 261
BseDI CCNNGG 1 cut(s) 261
BseGI GGATG 1 cut(s) 4
BseXI GCAGC 2 cut(s) 106, 143
BsgI GTGCAG 1 cut(s) 150
BshFI GGCC 1 cut(s) 16
BslFI GGGAC 2 cut(s) 252, 303
BsmFI GGGAC 2 cut(s) 252, 303
BsnI GGCC 1 cut(s) 16
Bsp119I TTCGAA 1 cut(s) 52
Bsp1286I GDGCHC 1 cut(s) 198
BspACI CCGC 3 cut(s) 13, 76, 98
BspANI GGCC 1 cut(s) 16
BspHI TCATGA 1 cut(s) 150
BspT104I TTCGAA 1 cut(s) 52
BssECI CCNNGG 1 cut(s) 261
BssT1I CCWWGG 1 cut(s) 261
Bst4CI ACNGT 3 cut(s) 41, 83, 109
BstAPI GCANNNNNTGC 1 cut(s) 320
BstBI TTCGAA 1 cut(s) 52
BstDEI CTNAG 1 cut(s) 9
BstF5I GGATG 1 cut(s) 4
BstMWI GCNNNNNNNGC 3 cut(s) 10, 128, 320
BstV1I GCAGC 2 cut(s) 106, 143
BsuRI GGCC 1 cut(s) 16
BtrI CACGTC 1 cut(s) 128
BtsCI GGATG 1 cut(s) 4
BtsIMutI CAGTG 1 cut(s) 114
CaiI CAGNNNCTG 1 cut(s) 113
CciI TCATGA 1 cut(s) 150
CviAII CATG 3 cut(s) 140, 151, 245
CviJI RGCY 4 cut(s) 16, 119, 196, 283
CviKI_1 RGCY 4 cut(s) 16, 119, 196, 283
DdeI CTNAG 1 cut(s) 9
Eco130I CCWWGG 1 cut(s) 261
Eco24I GRGCYC 1 cut(s) 198
Eco57I CTGAAG 2 cut(s) 135, 198
EcoT14I CCWWGG 1 cut(s) 261
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 198
ErhI CCWWGG 1 cut(s) 261
FaeI CATG 3 cut(s) 143, 154, 248
FaiI YATR 4 cut(s) 141, 152, 246, 276
FaqI GGGAC 2 cut(s) 252, 303
FatI CATG 3 cut(s) 139, 150, 244
Fnu4HI GCNGC 4 cut(s) 14, 98, 120, 132
FriOI GRGCYC 1 cut(s) 198
Fsp4HI GCNGC 4 cut(s) 14, 98, 120, 132
GluI GCNGC 4 cut(s) 14, 98, 120, 132
HaeIII GGCC 1 cut(s) 16
Hin1II CATG 3 cut(s) 143, 154, 248
HincII GTYRAC 1 cut(s) 22
HindII GTYRAC 1 cut(s) 22
HinfI GANTC 1 cut(s) 240
Hpy166II GTNNAC 2 cut(s) 22, 214
Hpy188I TCNGA 1 cut(s) 115
Hpy188III TCNNGA 4 cut(s) 44, 151, 161, 199
Hpy8I GTNNAC 2 cut(s) 22, 214
Hpy99I CGWCG 1 cut(s) 129
HpyCH4III ACNGT 3 cut(s) 41, 83, 109
HpyCH4IV ACGT 1 cut(s) 127
HpyCH4V TGCA 5 cut(s) 4, 131, 278, 314, 359
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 128, 320
HpyF3I CTNAG 1 cut(s) 9
HpySE526I ACGT 1 cut(s) 127
Hsp92II CATG 3 cut(s) 143, 154, 248
LpnPI CCDG 5 cut(s) 30, 38, 221, 252, 271
Lsp1109I GCAGC 2 cut(s) 106, 143
LweI GCATC 3 cut(s) 13, 301, 310
MaeII ACGT 1 cut(s) 127
MaeIII GTNAC 1 cut(s) 58
MboII GAAGA 1 cut(s) 282
MfeI CAATTG 2 cut(s) 306, 327
MhlI GDGCHC 1 cut(s) 198
MluCI AATT 4 cut(s) 306, 327, 353, 361
MlyI GAGTC 1 cut(s) 234
Mph1103I ATGCAT 1 cut(s) 6
MunI CAATTG 2 cut(s) 306, 327
MwoI GCNNNNNNNGC 3 cut(s) 10, 128, 320
NlaIII CATG 3 cut(s) 143, 154, 248
NmuCI GTSAC 1 cut(s) 58
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 52
PagI TCATGA 1 cut(s) 150
PkrI GCNGC 4 cut(s) 15, 99, 121, 133
PleI GAGTC 1 cut(s) 234
PpsI GAGTC 1 cut(s) 234
PstNI CAGNNNCTG 1 cut(s) 113
SatI GCNGC 4 cut(s) 14, 98, 120, 132
SchI GAGTC 1 cut(s) 234
SduI GDGCHC 1 cut(s) 198
SetI ASST 4 cut(s) 27, 121, 130, 285
SfaNI GCATC 3 cut(s) 13, 301, 310
SfuI TTCGAA 1 cut(s) 52
SmlI CTYRAG 2 cut(s) 65, 197
SmoI CTYRAG 2 cut(s) 65, 197
Sse9I AATT 4 cut(s) 306, 327, 353, 361
SsiI CCGC 3 cut(s) 13, 76, 98
StyI CCWWGG 1 cut(s) 261
TaaI ACNGT 3 cut(s) 41, 83, 109
TaiI ACGT 1 cut(s) 130
TaqI TCGA 2 cut(s) 52, 124
TasI AATT 4 cut(s) 306, 327, 353, 361
TauI GCSGC 2 cut(s) 16, 100
TscAI CASTG 1 cut(s) 114
TseFI GTSAC 1 cut(s) 58
TseI GCWGC 2 cut(s) 119, 131
Tsp45I GTSAC 1 cut(s) 58
TspDTI ATGAA 1 cut(s) 167
TspRI CASTG 1 cut(s) 114
XapI RAATTY 1 cut(s) 353
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.