Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005696

Physical Location & Seq

Genomic Coordinates Reverse (-)

82818991 .. 82827198

Gene Structure 8208 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG484200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGCTCGGTGCTACAGCGTCGAGGTTCTACAGAGTCACCGGCCTTCTCTTCCGTTCCCACCAACCCCTTCAAAGCCGCAACCTTTTCTCTCTCTCCCTCCCCAATTCCTCCATTTCCAAAACCTCCTTCCATGGAAACCCTATTCTTCTTCTTCCCCAAACAACATCCAGAAGAAGAATCATTCCTCTCCAAATCAACGCCTTCGTCTCCGGCACCTCCTCCTCCGCCGCCCCTCCGAACGGCCGGGCCTGGCTATCCACTTCGGCGCAGGACCAGACCAATCCACGGCCTTTCGTCCCTAAAAAGACTCCCGACGAACAACTCGGCGACGTCCAGATTTTCCGGACGCTCGCCAGTTACTTGTGGATGAAAGACAACTATGAATTCCGGCTTAGGGTTCTTACTGCCTTGGGGTTTTTGGTTGGGGCTAAGGTGCTCAATGTTCAGGTGCCGTTTCTGTTCAAGCTCGCCGTGGATTGGTTGACCACGGCCACCGGAAATGCTGGTAGTTTTGCGGCGTTCTCTGCCGCCAATCCGACTCAGTTGGCTCTTTTCGCAACGCCTGCGTCGGTTTTGATTGGGTATGGCATTGCACGCTCTGGCGCTTCTGCTTTCAACGAATTGAGGACTGCTGTGTTTTCTAAGGTAGCATTGCGAACAATCCGATCAGTATCCAGGAAGGTCTTCTCACATTTGCATGACCTTGATCTTCGATATCATCTTAGTCGAGAAACCGGTGCACTAAATAGAATCATTGATCGTGGTAGCCGTGCTATAAATTTCATTCTCTCGTCTATGGTATTCAATGTTGTACCCACCATTTTAGAGATATCTATGGTTTCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATGGATAACATCGCTATCAGTTGCTGCATATATTGCATTTACATTGACTGTTACACAGTGGAGGACGAAGTTCAGGAAGGCCATGAATAAGGCCGATAATGATGCTAGTACGAGGGCAATTGATTCACTTATTAATTATGAGACTGTCAAATATTTCAACAATGAAGGTTTTGAAGCTGATAAATATGACAAATACTTAAAGAGGTATGAAGATGCTGCCTTAAAAACACAACGTAGTCTTGCTTTTCTGAACTTCGGCCAAAGTATCATATTCAGCACAGCTTTATCAACGGCTATGGTGTTGTGTTCAAATGGTATTATGAATGGCAGTATGACAGTTGGTGATTTGGTCATGGTGAATGGACTTCTATTCCAGCTATCACTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACCATACAGAGCCTTGTTGACATGAAATCCATGTTTCAGTTACTGGAGGAAAGGGCTGAAATTAGAGACAAAGATGACGCAAAGCCTCTGCACCTAAGCGGGGGGAGCATTCAGTTTGACAACGTGCATTTCAGTTACCTAACGGAAAGAAAGATTCTTGATGGGATATCATTTCTTGTACCTGCTGGAAAGAGTGTGGCTATTGTTGGAACCAGCGGTAGTGGAAAGTCAACCATTCTCAGATTGCTGTTCAGGTTTTTTGACAGCCATTCCGGAAGTATAAGGATAGACGGTCAAGATATTCGAGATGTGACACTTGAGAGTTTGCGGAACTGTATTGGAGTTGTGCCACAAGATACAGTACTTTTCAATGATACAATTTACCACAACATTCATTATGGCCGTCTTTCAGCAACAAAAGAAGAGGTGTATGAAGCTGCTCGACGTGCAGCAATACATGATACTATCATGAACTTTCCCGACAGATATTCTACTGAAGTGGGGGAACGGGGGCTCAAGTTAAGTGGTGGGGAGAAGCAGCGTGTGGCACTGGCTCGTGCATTCTTGAAAGCACCTCCAATTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006777 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006875 GO:0006879 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009657 GO:0009658 GO:0009889 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010288 GO:0010380 GO:0016020 GO:0016043 GO:0018130 GO:0019222 GO:0019538 GO:0019637 GO:0019720 GO:0019725 GO:0019866 GO:0022622 GO:0030003 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046916 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051186 GO:0051188 GO:0051189 GO:0051193 GO:0051276 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071840 GO:0090056 GO:0090407 GO:0098771 GO:0099402 GO:1901360 GO:1901362 GO:1901401 GO:1901463 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

627

Amino Acids

69.48

Weight (kDa)

9.78

Isoelectric Point (pI)

30.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	136 - 422	1.1e-37	ABC transporter transmembrane region
ABC_tran	PF00005	485 - 627	6.3e-28	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28620 AT4G28630 AT5G58270
fragaria_vesca	FvH4_3g41120 FvH4_3g41120 FvH4_3g41120 FvH4_3g41120
malus_domestica	MD03G1047300.v1.1 MD11G1049800.v1.1
prunus_persica	Prupe.6G038500_v2.0.a1
pyrus_communis	pycom03g03730 pycom11g04040
rosa_chinensis	RchiOBHm_Chr5g0073901 RchiOBHm_Chr5g0073961
rosa_laevigata	RLG00000036423
rosa_multiflora	Rmu_sc0000470.1_g000016 Rmu_sc0000470.1_g000034
rosa_roxburghii	Rroxscaffold_1G00007470
rosa_rugosa	Rorug05G0427200
rosa_samantha	Rh5AG484200 Rh5AG484700 Rh5BG504900 Rh5BG505300 Rh5CG528700 Rh5CG529100 Rh5DG517200
rosa_wichuraiana	Rw0G006220 Rw5G045010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	333
Acc36I	ACCTGC	1 cut(s)	1486
AccB1I	GGYRCC	2 cut(s)	212, 448
AccI	GTMKAC	1 cut(s)	847
AccIII	TCCGGA	2 cut(s)	342, 1568
AciI	CCGC	8 cut(s)	76, 225, 228, 515, 528, 1395, 1512, 1624
AcoI	YGGCCR	4 cut(s)	241, 489, 1135, 1696
AcsI	RAATTY	3 cut(s)	383, 778, 860
AcuI	CTGAAG	1 cut(s)	1812
AcyI	GRCGYC	1 cut(s)	330
AfaI	GTAC	4 cut(s)	813, 988, 1476, 1659
AfiI	CCNNNNNNNGG	5 cut(s)	239, 285, 394, 477, 1396
AgeI	ACCGGT	1 cut(s)	734
AgsI	TTSAA	9 cut(s)	71, 463, 616, 805, 1036, 1052, 1188, 1666, 1864
AjiI	CACGTC	1 cut(s)	1742
AjnI	CCWGG	2 cut(s)	248, 674
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AluBI	AGCT	5 cut(s)	466, 1055, 1160, 1255, 1733
AluI	AGCT	5 cut(s)	466, 1055, 1160, 1255, 1733
Alw21I	GWGCWC	3 cut(s)	438, 742, 871
Alw26I	GTCTC	4 cut(s)	211, 1013, 1289, 1356
Alw44I	GTGCAC	1 cut(s)	738
AlwNI	CAGNNNCTG	2 cut(s)	902, 1339
Aor13HI	TCCGGA	2 cut(s)	342, 1568
AoxI	GGCC	9 cut(s)	40, 241, 246, 287, 489, 957, 969, 1135, 1696
ApaLI	GTGCAC	1 cut(s)	738
ApeKI	GCWGC	5 cut(s)	902, 1094, 1733, 1745, 1834
ApoI	RAATTY	3 cut(s)	383, 778, 860
AseI	ATTAAT	1 cut(s)	1011
AsiGI	ACCGGT	1 cut(s)	734
Asp700I	GAANNNNTTC	1 cut(s)	683
AspLEI	GCGC	2 cut(s)	268, 605
AspS9I	GGNCC	2 cut(s)	246, 271
AsuC2I	CCSGG	1 cut(s)	245
AsuHPI	GGTGA	3 cut(s)	28, 1232, 1246
AvaII	GGWCC	1 cut(s)	271
BaeGI	GKGCMC	1 cut(s)	742
BanI	GGYRCC	2 cut(s)	212, 448
BanII	GRGCYC	1 cut(s)	1812
BauI	CACGAG	1 cut(s)	1851
BbsI	GAAGAC	1 cut(s)	676
Bbv12I	GWGCWC	3 cut(s)	438, 742, 871
BbvI	GCAGC	5 cut(s)	889, 1081, 1720, 1757, 1846
BccI	CCATC	1 cut(s)	1451
BceAI	ACGGC	8 cut(s)	256, 302, 436, 455, 504, 753, 1185, 1683
BcgI	CGANNNNNNTGC	2 cut(s)	962, 996
BciT130I	CCWGG	2 cut(s)	250, 676
BciVI	GTATCC	1 cut(s)	682
BcnI	CCSGG	1 cut(s)	245
BcoDI	GTCTC	4 cut(s)	211, 1013, 1289, 1356
BfaI	CTAG	1 cut(s)	984
BfmI	CTRYAG	2 cut(s)	12, 28
BfoI	RGCGCY	1 cut(s)	606
BfuAI	ACCTGC	1 cut(s)	1486
BfuI	GTATCC	1 cut(s)	682
BisI	GCNGC	9 cut(s)	76, 228, 516, 528, 903, 1095, 1734, 1746, 1835
BlsI	GCNGC	9 cut(s)	77, 229, 517, 529, 904, 1096, 1735, 1747, 1836
BmcAI	AGTACT	1 cut(s)	1659
Bme1390I	CCNGG	3 cut(s)	245, 250, 676
Bme18I	GGWCC	1 cut(s)	271
BmgBI	CACGTC	1 cut(s)	1742
BmgT120I	GGNCC	2 cut(s)	246, 271
BmiI	GGNNCC	3 cut(s)	214, 450, 1507
BmrFI	CCNGG	3 cut(s)	245, 250, 676
BmsI	GCATC	2 cut(s)	970, 1081
BpiI	GAAGAC	1 cut(s)	676
BpmI	CTGGAG	1 cut(s)	1361
Bpu10I	CCTNAGC	3 cut(s)	392, 429, 1391
BpuEI	CTTGAG	2 cut(s)	1634, 1796
BpuMI	CCSGG	1 cut(s)	245
BsaBI	GATNNNNATC	1 cut(s)	670
BsaHI	GRCGYC	1 cut(s)	330
BsaI	GGTCTC	1 cut(s)	1289
BsaJI	CCNNGG	6 cut(s)	130, 284, 408, 471, 486, 1276
BsaWI	WCCGGW	4 cut(s)	342, 494, 734, 1568
Bsc4I	CCNNNNNNNGG	5 cut(s)	239, 285, 394, 477, 1396
Bse118I	RCCGGY	2 cut(s)	38, 734
Bse1I	ACTGG	4 cut(s)	354, 855, 1344, 1851
Bse3DI	GCAATG	2 cut(s)	588, 650
Bse8I	GATNNNNATC	1 cut(s)	670
BseAI	TCCGGA	2 cut(s)	342, 1568
BseBI	CCWGG	2 cut(s)	250, 676
BseDI	CCNNGG	6 cut(s)	130, 284, 408, 471, 486, 1276
BseGI	GGATG	2 cut(s)	164, 372
BseJI	GATNNNNATC	1 cut(s)	670
BseLI	CCNNNNNNNGG	5 cut(s)	239, 285, 394, 477, 1396
BseMI	GCAATG	2 cut(s)	588, 650
BseMII	CTCAG	2 cut(s)	554, 1549
BseNI	ACTGG	4 cut(s)	354, 855, 1344, 1851
BseRI	GAGGAG	2 cut(s)	208, 211
BseSI	GKGCMC	1 cut(s)	742
BseX3I	CGGCCG	1 cut(s)	241
BseXI	GCAGC	5 cut(s)	889, 1081, 1720, 1757, 1846
BsgI	GTGCAG	2 cut(s)	1370, 1764
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	9 cut(s)	42, 243, 248, 289, 491, 959, 971, 1137, 1698
BshNI	GGYRCC	2 cut(s)	212, 448
BshTI	ACCGGT	1 cut(s)	734
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	3 cut(s)	438, 742, 871
BsiSI	CCGG	8 cut(s)	39, 210, 244, 343, 388, 495, 735, 1569
BslFI	GGGAC	1 cut(s)	281
BslI	CCNNNNNNNGG	5 cut(s)	239, 285, 394, 477, 1396
BsmAI	GTCTC	4 cut(s)	211, 1013, 1289, 1356
BsmBI	CGTCTC	1 cut(s)	211
BsmFI	GGGAC	1 cut(s)	281
BsmI	GAATGC	2 cut(s)	1404, 1856
BsnI	GGCC	9 cut(s)	42, 243, 248, 289, 491, 959, 971, 1137, 1698
Bso31I	GGTCTC	1 cut(s)	1289
Bsp1286I	GDGCHC	4 cut(s)	438, 742, 871, 1812
Bsp13I	TCCGGA	2 cut(s)	342, 1568
Bsp143I	GATC	3 cut(s)	665, 706, 757
Bsp19I	CCATGG	1 cut(s)	130
BspACI	CCGC	8 cut(s)	76, 225, 228, 515, 528, 1395, 1512, 1624
BspANI	GGCC	9 cut(s)	42, 243, 248, 289, 491, 959, 971, 1137, 1698
BspCNI	CTCAG	2 cut(s)	553, 1548
BspEI	TCCGGA	2 cut(s)	342, 1568
BspHI	TCATGA	1 cut(s)	1764
BspLI	GGNNCC	3 cut(s)	214, 450, 1507
BspMI	ACCTGC	1 cut(s)	1486
BspT107I	GGYRCC	2 cut(s)	212, 448
BspTNI	GGTCTC	1 cut(s)	1289
BsrDI	GCAATG	2 cut(s)	588, 650
BsrFI	RCCGGY	2 cut(s)	38, 734
BsrI	ACTGG	4 cut(s)	354, 855, 1344, 1851
BssAI	RCCGGY	2 cut(s)	38, 734
BssECI	CCNNGG	6 cut(s)	130, 284, 408, 471, 486, 1276
BssMI	GATC	3 cut(s)	665, 706, 757
BssNAI	GTATAC	1 cut(s)	848
BssNI	GRCGYC	1 cut(s)	330
BssSI	CACGAG	1 cut(s)	1851
BssT1I	CCWWGG	3 cut(s)	130, 408, 1276
Bst1107I	GTATAC	1 cut(s)	848
Bst2BI	CACGAG	1 cut(s)	1851
Bst2UI	CCWGG	2 cut(s)	250, 676
Bst4CI	ACNGT	7 cut(s)	928, 936, 1024, 1216, 1589, 1631, 1657
Bst6I	CTCTTC	2 cut(s)	53, 1713
BstACI	GRCGYC	1 cut(s)	330
BstAPI	GCANNNNNTGC	3 cut(s)	563, 875, 911
BstC8I	GCNNGC	4 cut(s)	351, 468, 564, 595
BstDEI	CTNAG	7 cut(s)	392, 429, 540, 642, 722, 1391, 1535
BstDSI	CCRYGG	4 cut(s)	130, 284, 471, 486
BstF5I	GGATG	2 cut(s)	164, 372
BstH2I	RGCGCY	1 cut(s)	606
BstHHI	GCGC	2 cut(s)	268, 605
BstKTI	GATC	3 cut(s)	668, 709, 760
BstMAI	GTCTC	4 cut(s)	211, 1013, 1289, 1356
BstMBI	GATC	3 cut(s)	665, 706, 757
BstMCI	CGRYCG	1 cut(s)	244
BstMWI	GCNNNNNNNGC	8 cut(s)	524, 554, 563, 594, 875, 911, 1401, 1742
BstNI	CCWGG	2 cut(s)	250, 676
BstSCI	CCNGG	3 cut(s)	243, 248, 674
BstSFI	CTRYAG	2 cut(s)	12, 28
BstSLI	GKGCMC	1 cut(s)	742
BstV1I	GCAGC	5 cut(s)	889, 1081, 1720, 1757, 1846
BstV2I	GAAGAC	1 cut(s)	676
BstZ17I	GTATAC	1 cut(s)	848
BstZI	CGGCCG	1 cut(s)	241
BsuI	GTATCC	1 cut(s)	682
BsuRI	GGCC	9 cut(s)	42, 243, 248, 289, 491, 959, 971, 1137, 1698
BtgI	CCRYGG	4 cut(s)	130, 284, 471, 486
BtgZI	GCGATG	1 cut(s)	873
BtrI	CACGTC	1 cut(s)	1742
BtsCI	GGATG	2 cut(s)	164, 372
BtsIMutI	CAGTG	2 cut(s)	941, 1844
BveI	ACCTGC	1 cut(s)	1486
Cac8I	GCNNGC	4 cut(s)	351, 468, 564, 595
CaiI	CAGNNNCTG	2 cut(s)	902, 1339
CciI	TCATGA	1 cut(s)	1764
CfoI	GCGC	2 cut(s)	268, 605
Cfr10I	RCCGGY	2 cut(s)	38, 734
Cfr13I	GGNCC	2 cut(s)	246, 271
CseI	GACGC	4 cut(s)	6, 355, 555, 1382
Csp6I	GTAC	4 cut(s)	812, 987, 1475, 1658
CspAI	ACCGGT	1 cut(s)	734
CspCI	CAANNNNNGTGG	2 cut(s)	1801, 1836
CviAII	CATG	9 cut(s)	131, 698, 879, 961, 1231, 1318, 1327, 1754, 1765
CviQI	GTAC	4 cut(s)	812, 987, 1475, 1658
DdeI	CTNAG	7 cut(s)	392, 429, 540, 642, 722, 1391, 1535
DpnI	GATC	3 cut(s)	667, 708, 759
DpnII	GATC	3 cut(s)	665, 706, 757
EaeI	YGGCCR	4 cut(s)	241, 489, 1135, 1696
EagI	CGGCCG	1 cut(s)	241
Eam1104I	CTCTTC	2 cut(s)	53, 1713
EarI	CTCTTC	2 cut(s)	53, 1713
EciI	GGCGGA	1 cut(s)	214
EclXI	CGGCCG	1 cut(s)	241
Eco130I	CCWWGG	3 cut(s)	130, 408, 1276
Eco24I	GRGCYC	1 cut(s)	1812
Eco31I	GGTCTC	1 cut(s)	1289
Eco32I	GATATC	3 cut(s)	716, 831, 1464
Eco47I	GGWCC	1 cut(s)	271
Eco52I	CGGCCG	1 cut(s)	241
Eco57I	CTGAAG	1 cut(s)	1812
EcoRI	GAATTC	1 cut(s)	383
EcoRII	CCWGG	2 cut(s)	248, 674
EcoRV	GATATC	3 cut(s)	716, 831, 1464
EcoT14I	CCWWGG	3 cut(s)	130, 408, 1276
EcoT38I	GRGCYC	1 cut(s)	1812
ErhI	CCWWGG	3 cut(s)	130, 408, 1276
Esp3I	CGTCTC	1 cut(s)	211
FaeI	CATG	9 cut(s)	134, 701, 882, 964, 1234, 1321, 1330, 1757, 1768
FaqI	GGGAC	1 cut(s)	281
FatI	CATG	9 cut(s)	130, 697, 878, 960, 1230, 1317, 1326, 1753, 1764
FauI	CCCGC	1 cut(s)	1388
FblI	GTMKAC	1 cut(s)	847
Fnu4HI	GCNGC	9 cut(s)	76, 228, 516, 528, 903, 1095, 1734, 1746, 1835
FokI	GGATG	2 cut(s)	151, 379
FriOI	GRGCYC	1 cut(s)	1812
Fsp4HI	GCNGC	9 cut(s)	76, 228, 516, 528, 903, 1095, 1734, 1746, 1835
FspBI	CTAG	1 cut(s)	984
GlaI	GCGC	2 cut(s)	267, 604
GluI	GCNGC	9 cut(s)	76, 228, 516, 528, 903, 1095, 1734, 1746, 1835
GsuI	CTGGAG	1 cut(s)	1361
HaeII	RGCGCY	1 cut(s)	606
HaeIII	GGCC	9 cut(s)	42, 243, 248, 289, 491, 959, 971, 1137, 1698
HapII	CCGG	8 cut(s)	39, 210, 244, 343, 388, 495, 735, 1569
HgaI	GACGC	4 cut(s)	6, 355, 555, 1382
HhaI	GCGC	2 cut(s)	268, 605
Hin1I	GRCGYC	1 cut(s)	330
Hin1II	CATG	9 cut(s)	134, 701, 882, 964, 1234, 1321, 1330, 1757, 1768
Hin6I	GCGC	2 cut(s)	266, 603
HinP1I	GCGC	2 cut(s)	266, 603
HincII	GTYRAC	3 cut(s)	483, 1315, 1527
HindII	GTYRAC	3 cut(s)	483, 1315, 1527
HinfI	GANTC	7 cut(s)	33, 177, 307, 538, 750, 1001, 1450
HpaII	CCGG	8 cut(s)	39, 210, 244, 343, 388, 495, 735, 1569
HphI	GGTGA	3 cut(s)	28, 1232, 1246
Hpy166II	GTNNAC	5 cut(s)	483, 740, 848, 1315, 1527
Hpy188I	TCNGA	5 cut(s)	237, 537, 665, 1128, 1538
Hpy8I	GTNNAC	5 cut(s)	483, 740, 848, 1315, 1527
Hpy99I	CGWCG	5 cut(s)	22, 317, 332, 571, 1743
HpyAV	CCTTC	7 cut(s)	53, 77, 136, 211, 673, 949, 1037
HpyCH4III	ACNGT	7 cut(s)	928, 936, 1024, 1216, 1589, 1631, 1657
HpyCH4IV	ACGT	4 cut(s)	330, 1111, 1419, 1741
HpyF10VI	GCNNNNNNNGC	8 cut(s)	524, 554, 563, 594, 875, 911, 1401, 1742
HpyF3I	CTNAG	7 cut(s)	392, 429, 540, 642, 722, 1391, 1535
HpySE526I	ACGT	4 cut(s)	330, 1111, 1419, 1741
Hsp92I	GRCGYC	1 cut(s)	330
Hsp92II	CATG	9 cut(s)	134, 701, 882, 964, 1234, 1321, 1330, 1757, 1768
HspAI	GCGC	2 cut(s)	266, 603
Kpn2I	TCCGGA	2 cut(s)	342, 1568
Kzo9I	GATC	3 cut(s)	665, 706, 757
LmnI	GCTCC	2 cut(s)	866, 1401
Lsp1109I	GCAGC	5 cut(s)	889, 1081, 1720, 1757, 1846
LweI	GCATC	2 cut(s)	970, 1081
MaeI	CTAG	1 cut(s)	984
MaeII	ACGT	4 cut(s)	330, 1111, 1419, 1741
MaeIII	GTNAC	6 cut(s)	34, 356, 928, 1335, 1430, 1606
MalI	GATC	3 cut(s)	667, 708, 759
MboI	GATC	3 cut(s)	665, 706, 757
MfeI	CAATTG	1 cut(s)	996
MhlI	GDGCHC	4 cut(s)	438, 742, 871, 1812
MlyI	GAGTC	3 cut(s)	42, 301, 532
MmeI	TCCRAC	2 cut(s)	560, 1483
MroI	TCCGGA	2 cut(s)	342, 1568
MroXI	GAANNNNTTC	1 cut(s)	683
MseI	TTAA	4 cut(s)	1011, 1076, 1100, 1817
MslI	CAYNNNNRTG	1 cut(s)	696
MspA1I	CMGCKG	1 cut(s)	1512
MspI	CCGG	8 cut(s)	39, 210, 244, 343, 388, 495, 735, 1569
MspR9I	CCNGG	3 cut(s)	245, 250, 676
MunI	CAATTG	1 cut(s)	996
Mva1269I	GAATGC	2 cut(s)	1404, 1856
MvaI	CCWGG	2 cut(s)	250, 676
MwoI	GCNNNNNNNGC	8 cut(s)	524, 554, 563, 594, 875, 911, 1401, 1742
NciI	CCSGG	1 cut(s)	245
NcoI	CCATGG	1 cut(s)	130
NdeII	GATC	3 cut(s)	665, 706, 757
NlaIII	CATG	9 cut(s)	134, 701, 882, 964, 1234, 1321, 1330, 1757, 1768
NlaIV	GGNNCC	3 cut(s)	214, 450, 1507
NmeAIII	GCCGAG	1 cut(s)	303
NmuCI	GTSAC	2 cut(s)	34, 1606
PagI	TCATGA	1 cut(s)	1764
PcsI	WCGNNNNNNNCGW	1 cut(s)	766
PctI	GAATGC	2 cut(s)	1404, 1856
PdmI	GAANNNNTTC	1 cut(s)	683
PfeI	GAWTC	4 cut(s)	177, 750, 1001, 1450
PfoI	TCCNGGA	1 cut(s)	674
PinAI	ACCGGT	1 cut(s)	734
PkrI	GCNGC	9 cut(s)	77, 229, 517, 529, 904, 1096, 1735, 1747, 1836
PleI	GAGTC	3 cut(s)	41, 301, 532
PpsI	GAGTC	3 cut(s)	41, 301, 532
PshBI	ATTAAT	1 cut(s)	1011
Psp6I	CCWGG	2 cut(s)	248, 674
PspGI	CCWGG	2 cut(s)	248, 674
PspN4I	GGNNCC	3 cut(s)	214, 450, 1507
PspPI	GGNCC	2 cut(s)	246, 271
PstNI	CAGNNNCTG	2 cut(s)	902, 1339
RsaI	GTAC	4 cut(s)	813, 988, 1476, 1659
RsaNI	GTAC	4 cut(s)	812, 987, 1475, 1658
RseI	CAYNNNNRTG	1 cut(s)	696
SaqAI	TTAA	4 cut(s)	1011, 1076, 1100, 1817
SatI	GCNGC	9 cut(s)	76, 228, 516, 528, 903, 1095, 1734, 1746, 1835
Sau3AI	GATC	3 cut(s)	665, 706, 757
Sau96I	GGNCC	2 cut(s)	246, 271
ScaI	AGTACT	1 cut(s)	1659
SchI	GAGTC	3 cut(s)	42, 301, 532
ScrFI	CCNGG	3 cut(s)	245, 250, 676
SduI	GDGCHC	4 cut(s)	438, 742, 871, 1812
SfaNI	GCATC	2 cut(s)	970, 1081
SfcI	CTRYAG	2 cut(s)	12, 28
SinI	GGWCC	1 cut(s)	271
SmiMI	CAYNNNNRTG	1 cut(s)	696
SmlI	CTYRAG	2 cut(s)	1613, 1811
SmoI	CTYRAG	2 cut(s)	1613, 1811
SsiI	CCGC	8 cut(s)	76, 225, 228, 515, 528, 1395, 1512, 1624
SspI	AATATT	1 cut(s)	1031
SspMI	CTAG	1 cut(s)	984
StyD4I	CCNGG	3 cut(s)	243, 248, 674
StyI	CCWWGG	3 cut(s)	130, 408, 1276
TaaI	ACNGT	7 cut(s)	928, 936, 1024, 1216, 1589, 1631, 1657
TaiI	ACGT	4 cut(s)	333, 1114, 1422, 1744
TaqI	TCGA	5 cut(s)	20, 712, 727, 1600, 1738
TatI	WGTACW	1 cut(s)	1657
TauI	GCSGC	4 cut(s)	78, 230, 518, 530
TfiI	GAWTC	4 cut(s)	177, 750, 1001, 1450
Tru1I	TTAA	4 cut(s)	1011, 1076, 1100, 1817
Tru9I	TTAA	4 cut(s)	1011, 1076, 1100, 1817
TscAI	CASTG	2 cut(s)	941, 1851
TseFI	GTSAC	2 cut(s)	34, 1606
TseI	GCWGC	5 cut(s)	902, 1094, 1733, 1745, 1834
Tsp45I	GTSAC	2 cut(s)	34, 1606
TspGWI	ACGGA	2 cut(s)	41, 1454
TspRI	CASTG	2 cut(s)	941, 1851
VneI	GTGCAC	1 cut(s)	738
VpaK11BI	GGWCC	1 cut(s)	271
VspI	ATTAAT	1 cut(s)	1011
XapI	RAATTY	3 cut(s)	383, 778, 860
XmiI	GTMKAC	1 cut(s)	847
XmnI	GAANNNNTTC	1 cut(s)	683
XspI	CTAG	1 cut(s)	984
ZraI	GACGTC	1 cut(s)	331
ZrmI	AGTACT	1 cut(s)	1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.