Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0005696

Physical Location & Seq

Genomic Coordinates Forward (+)

3163081 .. 3169828

Gene Structure 6748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g04040.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGCTGGGTCCCACCGCGTCGAAGTGGCACAGAGCCGGCGGGAATCTCCTCCACCTGAAACCCCACCGGAGCTTCCAATCAAACGCCTTCACCACCAGAACCGCCTTCCACGGCAGGGCCATTCGTCTCCCAAAGTCTTTGACTTCGAACACCGTCCGTACAGCATCAATACTCCCTTTCCGCGTTAACGCCTTCATCGCCGATGGCACGTCCGCCCCTTCTCAGCCGGACGGGCGGTCGTTGTTCTCCACATCCCCGGACAAGAACAACCCGACTCCTACAGTGTCTAAGGGGAATTCCGTCGAACAGATTACGGACGTGCAGATTTTCCGAACTCTCGCCAGTTACTTGTGGATGAAAGGTAACTATGAATTCCGCATCAGGGTCATTGCTGCTTTGGGGTTCTTGGTTGGCGCGAAGGTACTCAATGTGCAGGTGCCTTTCCTTTTCAAGCTTGCCGTTGATTGGTTGAGCTCGGCCACTGGCAATGCCACTGCTCTGGCTTCTTTCACCGCCGCCAATTCGACCCAGTTGGCTCTTTTTGTAACCCCGGCTTCGGTTTTGATTGGATATGGGATTGCACGTACTTGCGCTTCTGCTTTCAACGAATTGCGGACTGCCGTGTTTTCTAAGGTTGCGCTGCGAACAATCCGATCAGTATCTAGGAAGGTCTTCTCTCATTTGCACGACCTTGATCTTCAATATCATCTTAGTCGAGAAACCGGTGGACTAAATAGAATAATTGACCGTGGTAGCCGTGCAATAAATTTTATTCTCTCGTCTATGGTGTTCAATGTTGTACCCACCATCTTAGAGATATCTATGGTTTCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCGTGGATAACTTCACTATCAGTTGCTGCATATATCGCATTTACATTGACTGTCACACAGTGGAGGACTAAGTTTAGGAAGGCCATGAATAAGGCTGATAATGATGCTAGTACAAGGGCAATCGATTCACTTATAAATTATGAGACTGTGAAATATTTCAATAACGAAACTTATGAAGCCACTAAATATGATGAGTACTTAAAGAGGTATGAGGATGCTGCTTTAAAAACACAACGCAGTCTTGCTTTTTTGAACTTCGGCCAAAATATTATATTTAGCACGGCTCTGTCAACTGCTATGGTGTTGTGTTCAAATGGTATTATGAGTGGCAATATGACAGTTGGTGATTTGGTCATGGTGAATGGACTTCTATTCCAGCTCTCGCTTCCACTCAATTTTCTTGGTAGTGTTTATCGTGAGACTATACAGAGTCTGGTTGACATGAAATCTATGTTTCAGTTACTGGAGGTAAAGGCTGAAATTGGTGACAAAGCTGATGCAAAGCCTCTGGAGTTACGTGGGGGGAGCGTTCAGTTTGACAATGTACACTTCAGTTACCTGACAGAAAGAAAGATTCTTGATGGGATATCATTTGTTGTACCTGCTGGAAAGAGTGTGGCTATCGTTGGAACCAGTGGAAGTGGCAAGTCCACCATTCTCAGATTGCTCTTCAGGTTCTTTGACACCCATTCTGGAAGGATAAAGATAGATGGTCAAGATATTCGCGATGTGACACTTGAGAGTGTACGGAAGTCTATTGGTGTTGTGCCCCAAGATACAGTACTTTTCAATGATACGATATTTCACAACATTCATTATGGTAATCTTTCAGCAACAAAAGAAGAGGTGTATGATGCCGCTCGACGCGCAGCAATACATGACACTATCATGAAGTTCCCTGACAGGTACTCTACTGTTGTAGGGGAACGAGGGCTTAAGTTAAGTGGTGGTGAGAAACAGCGTGTGGCACTGGCTCGTGCATTCTTGAAAGCGCCTCCAATTCTCTTATGTGATGAAGCTACAAGTGCACTAGATAGTACCACAGAAGCAGAAATATTAACTGCATTGAAGTCCTTGGCAACTAATCGAACATCAATTTTCATTGCCCATAGGCTAACCACTGCAATGCAGTGCGATGAGATAATAGTTCTGGAAAACGGGAAAGTAGTAGAGCAGGGACCCCATGATGTTCTCTTGTCTAAGGCAGGAAGATATGCACAGCTCTGGGGACAGCAAAATAACACAATTGATGCGCTTGATTCTACCGTTAAATTGGGGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006777 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006875 GO:0006879 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009657 GO:0009658 GO:0009889 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010288 GO:0010380 GO:0016020 GO:0016043 GO:0018130 GO:0019222 GO:0019538 GO:0019637 GO:0019720 GO:0019725 GO:0019866 GO:0022622 GO:0030003 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046916 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051186 GO:0051188 GO:0051189 GO:0051193 GO:0051276 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071840 GO:0090056 GO:0090407 GO:0098771 GO:0099402 GO:1901360 GO:1901362 GO:1901401 GO:1901463 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

716

Amino Acids

78.56

Weight (kDa)

9.53

Isoelectric Point (pI)

25.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28620 AT4G28630 AT5G58270
fragaria_vesca	FvH4_3g41120 FvH4_3g41120 FvH4_3g41120 FvH4_3g41120
malus_domestica	MD03G1047300.v1.1 MD11G1049800.v1.1
prunus_persica	Prupe.6G038500_v2.0.a1
pyrus_communis	pycom03g03730 pycom11g04040
rosa_chinensis	RchiOBHm_Chr5g0073901 RchiOBHm_Chr5g0073961
rosa_laevigata	RLG00000036423
rosa_multiflora	Rmu_sc0000470.1_g000016 Rmu_sc0000470.1_g000034
rosa_roxburghii	Rroxscaffold_1G00007470
rosa_rugosa	Rorug05G0427200
rosa_samantha	Rh5AG484200 Rh5AG484700 Rh5BG504900 Rh5BG505300 Rh5CG528700 Rh5CG529100 Rh5DG517200
rosa_wichuraiana	Rw0G006220 Rw5G045010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	998
AarI	CACCTGC	1 cut(s)	424
Acc36I	ACCTGC	2 cut(s)	424, 1474
AccB1I	GGYRCC	1 cut(s)	436
AccBSI	CCGCTC	1 cut(s)	1724
AccI	GTMKAC	1 cut(s)	835
AccII	CGCG	5 cut(s)	17, 183, 416, 1590, 1731
AcoI	YGGCCR	2 cut(s)	477, 1123
AcsI	RAATTY	4 cut(s)	295, 371, 766, 848
AcuI	CTGAAG	2 cut(s)	1399, 1519
AdeI	CACNNNGTG	1 cut(s)	924
AfiI	CCNNNNNNNGG	4 cut(s)	115, 382, 465, 556
AflII	CTTAAG	1 cut(s)	1799
AgeI	ACCGGT	1 cut(s)	722
AhdI	GACNNNNNGTC	1 cut(s)	235
AjiI	CACGTC	2 cut(s)	210, 319
AluBI	AGCT	7 cut(s)	72, 454, 474, 1243, 1358, 1883, 2086
AluI	AGCT	7 cut(s)	72, 454, 474, 1243, 1358, 1883, 2086
Alw21I	GWGCWC	3 cut(s)	476, 859, 1894
Alw26I	GTCTC	3 cut(s)	131, 1001, 1277
Alw44I	GTGCAC	1 cut(s)	1890
AlwNI	CAGNNNCTG	3 cut(s)	890, 1297, 1327
AoxI	GGCC	4 cut(s)	117, 477, 945, 1123
ApaLI	GTGCAC	1 cut(s)	1890
ApeKI	GCWGC	5 cut(s)	392, 640, 890, 1082, 1733
ApoI	RAATTY	4 cut(s)	295, 371, 766, 848
AsiGI	ACCGGT	1 cut(s)	722
Asp700I	GAANNNNTTC	2 cut(s)	671, 1019
AspLEI	GCGC	6 cut(s)	416, 593, 640, 1733, 1858, 2119
AspS9I	GGNCC	3 cut(s)	8, 117, 2042
AsuC2I	CCSGG	2 cut(s)	257, 551
AsuHPI	GGTGA	6 cut(s)	82, 502, 1220, 1234, 1361, 1826
AsuII	TTCGAA	1 cut(s)	146
AvaII	GGWCC	2 cut(s)	8, 2042
BaeGI	GKGCMC	2 cut(s)	1635, 1894
BanI	GGYRCC	1 cut(s)	436
BanII	GRGCYC	1 cut(s)	476
BarI	GAAGNNNNNNTAC	2 cut(s)	577, 609
BauI	CACGAG	1 cut(s)	1839
BbsI	GAAGAC	1 cut(s)	664
Bbv12I	GWGCWC	3 cut(s)	476, 859, 1894
BbvI	GCAGC	5 cut(s)	379, 627, 877, 1069, 1745
BccI	CCATC	4 cut(s)	197, 815, 1439, 1568
BceAI	ACGGC	5 cut(s)	127, 443, 605, 741, 1161
BcnI	CCSGG	2 cut(s)	257, 551
BcoDI	GTCTC	3 cut(s)	131, 1001, 1277
BfaI	CTAG	3 cut(s)	663, 972, 1895
BfmI	CTRYAG	1 cut(s)	279
BfoI	RGCGCY	1 cut(s)	1859
BfrI	CTTAAG	1 cut(s)	1799
BfuAI	ACCTGC	2 cut(s)	424, 1474
BglI	GCCNNNNNGGC	1 cut(s)	232
BisI	GCNGC	7 cut(s)	393, 516, 641, 891, 1083, 1722, 1734
BlsI	GCNGC	7 cut(s)	394, 517, 642, 892, 1084, 1723, 1735
BmcAI	AGTACT	2 cut(s)	1061, 1647
Bme1390I	CCNGG	2 cut(s)	257, 551
Bme18I	GGWCC	2 cut(s)	8, 2042
BmeRI	GACNNNNNGTC	1 cut(s)	235
BmgBI	CACGTC	2 cut(s)	210, 319
BmgT120I	GGNCC	3 cut(s)	8, 117, 2042
BmiI	GGNNCC	6 cut(s)	9, 10, 438, 1495, 2043, 2044
BmrFI	CCNGG	2 cut(s)	257, 551
BmrI	ACTGGG	1 cut(s)	523
BmsI	GCATC	7 cut(s)	173, 387, 958, 1069, 1351, 1708, 2104
BmuI	ACTGGG	1 cut(s)	523
BpiI	GAAGAC	1 cut(s)	664
BpmI	CTGGAG	2 cut(s)	1349, 1394
Bpu14I	TTCGAA	1 cut(s)	146
BpuEI	CTTGAG	1 cut(s)	1622
BpuMI	CCSGG	2 cut(s)	257, 551
Bsa29I	ATCGAT	1 cut(s)	987
BsaAI	YACGTR	2 cut(s)	584, 1382
BsaBI	GATNNNNATC	1 cut(s)	658
BsaJI	CCNNGG	5 cut(s)	109, 255, 549, 748, 1938
BsaWI	WCCGGW	2 cut(s)	66, 722
Bsc4I	CCNNNNNNNGG	4 cut(s)	115, 382, 465, 556
Bse118I	RCCGGY	2 cut(s)	35, 722
Bse1I	ACTGG	7 cut(s)	342, 487, 529, 843, 1332, 1497, 1839
Bse3DI	GCAATG	4 cut(s)	387, 493, 1965, 1995
Bse8I	GATNNNNATC	1 cut(s)	658
BseCI	ATCGAT	1 cut(s)	987
BseDI	CCNNGG	5 cut(s)	109, 255, 549, 748, 1938
BseGI	GGATG	3 cut(s)	251, 360, 1084
BseJI	GATNNNNATC	1 cut(s)	658
BseLI	CCNNNNNNNGG	4 cut(s)	115, 382, 465, 556
BseMI	GCAATG	4 cut(s)	387, 493, 1965, 1995
BseMII	CTCAG	2 cut(s)	236, 1537
BseNI	ACTGG	7 cut(s)	342, 487, 529, 843, 1332, 1497, 1839
BseRI	GAGGAG	1 cut(s)	38
BseSI	GKGCMC	2 cut(s)	1635, 1894
BseXI	GCAGC	5 cut(s)	379, 627, 877, 1069, 1745
BseYI	CCCAGC	1 cut(s)	4
BsgI	GTGCAG	2 cut(s)	341, 452
Bsh1236I	CGCG	5 cut(s)	17, 183, 416, 1590, 1731
Bsh1285I	CGRYCG	1 cut(s)	239
BshFI	GGCC	4 cut(s)	119, 479, 947, 1125
BshNI	GGYRCC	1 cut(s)	436
BshTI	ACCGGT	1 cut(s)	722
BshVI	ATCGAT	1 cut(s)	987
BsiEI	CGRYCG	1 cut(s)	239
BsiHKAI	GWGCWC	3 cut(s)	476, 859, 1894
BsiSI	CCGG	6 cut(s)	36, 67, 227, 257, 551, 723
BslFI	GGGAC	2 cut(s)	2055, 2106
BslI	CCNNNNNNNGG	4 cut(s)	115, 382, 465, 556
BsmAI	GTCTC	3 cut(s)	131, 1001, 1277
BsmBI	CGTCTC	1 cut(s)	131
BsmFI	GGGAC	2 cut(s)	2055, 2106
BsmI	GAATGC	1 cut(s)	1844
BsnI	GGCC	4 cut(s)	119, 479, 947, 1125
Bsp119I	TTCGAA	1 cut(s)	146
Bsp1286I	GDGCHC	4 cut(s)	476, 859, 1635, 1894
Bsp1407I	TGTACA	1 cut(s)	1408
Bsp143I	GATC	2 cut(s)	653, 694
Bsp68I	TCGCGA	1 cut(s)	1590
BspANI	GGCC	4 cut(s)	119, 479, 947, 1125
BspCNI	CTCAG	2 cut(s)	235, 1536
BspDI	ATCGAT	1 cut(s)	987
BspFNI	CGCG	5 cut(s)	17, 183, 416, 1590, 1731
BspHI	TCATGA	1 cut(s)	1752
BspLI	GGNNCC	6 cut(s)	9, 10, 438, 1495, 2043, 2044
BspMI	ACCTGC	2 cut(s)	424, 1474
BspQI	GCTCTTC	1 cut(s)	1538
BspT104I	TTCGAA	1 cut(s)	146
BspT107I	GGYRCC	1 cut(s)	436
BspTI	CTTAAG	1 cut(s)	1799
BsrBI	CCGCTC	1 cut(s)	1724
BsrDI	GCAATG	4 cut(s)	387, 493, 1965, 1995
BsrFI	RCCGGY	2 cut(s)	35, 722
BsrGI	TGTACA	1 cut(s)	1408
BsrI	ACTGG	7 cut(s)	342, 487, 529, 843, 1332, 1497, 1839
BssAI	RCCGGY	2 cut(s)	35, 722
BssECI	CCNNGG	5 cut(s)	109, 255, 549, 748, 1938
BssMI	GATC	2 cut(s)	653, 694
BssNAI	GTATAC	1 cut(s)	836
BssSI	CACGAG	1 cut(s)	1839
BssT1I	CCWWGG	1 cut(s)	1938
Bst1107I	GTATAC	1 cut(s)	836
Bst2BI	CACGAG	1 cut(s)	1839
Bst6I	CTCTTC	2 cut(s)	1538, 1701
BstAFI	CTTAAG	1 cut(s)	1799
BstAPI	GCANNNNNTGC	1 cut(s)	863
BstAUI	TGTACA	1 cut(s)	1408
BstBAI	YACGTR	2 cut(s)	584, 1382
BstBI	TTCGAA	1 cut(s)	146
BstC8I	GCNNGC	2 cut(s)	37, 456
BstDEI	CTNAG	8 cut(s)	222, 288, 630, 710, 811, 933, 1523, 2064
BstDSI	CCRYGG	2 cut(s)	109, 748
BstF5I	GGATG	3 cut(s)	251, 360, 1084
BstFNI	CGCG	5 cut(s)	17, 183, 416, 1590, 1731
BstH2I	RGCGCY	1 cut(s)	1859
BstHHI	GCGC	6 cut(s)	416, 593, 640, 1733, 1858, 2119
BstKTI	GATC	2 cut(s)	656, 697
BstMAI	GTCTC	3 cut(s)	131, 1001, 1277
BstMBI	GATC	2 cut(s)	653, 694
BstMCI	CGRYCG	1 cut(s)	239
BstMWI	GCNNNNNNNGC	6 cut(s)	197, 232, 863, 899, 1730, 1889
BstSCI	CCNGG	2 cut(s)	255, 549
BstSFI	CTRYAG	1 cut(s)	279
BstSLI	GKGCMC	2 cut(s)	1635, 1894
BstUI	CGCG	5 cut(s)	17, 183, 416, 1590, 1731
BstV1I	GCAGC	5 cut(s)	379, 627, 877, 1069, 1745
BstV2I	GAAGAC	1 cut(s)	664
BstXI	CCANNNNNNTGG	1 cut(s)	499
BstZ17I	GTATAC	1 cut(s)	836
Bsu15I	ATCGAT	1 cut(s)	987
BsuRI	GGCC	4 cut(s)	119, 479, 947, 1125
BsuTUI	ATCGAT	1 cut(s)	987
BtgI	CCRYGG	2 cut(s)	109, 748
BtgZI	GCGATG	3 cut(s)	181, 1605, 2013
BtrI	CACGTC	2 cut(s)	210, 319
BtsCI	GGATG	3 cut(s)	251, 360, 1084
BtsI	GCAGTG	3 cut(s)	492, 1983, 2000
BtsIMutI	CAGTG	8 cut(s)	288, 480, 492, 929, 1504, 1832, 1983, 2000
BtuMI	TCGCGA	1 cut(s)	1590
BveI	ACCTGC	2 cut(s)	424, 1474
Cac8I	GCNNGC	2 cut(s)	37, 456
CaiI	CAGNNNCTG	3 cut(s)	890, 1297, 1327
CciI	TCATGA	1 cut(s)	1752
CfoI	GCGC	6 cut(s)	416, 593, 640, 1733, 1858, 2119
Cfr10I	RCCGGY	2 cut(s)	35, 722
Cfr13I	GGNCC	3 cut(s)	8, 117, 2042
ClaI	ATCGAT	1 cut(s)	987
CseI	GACGC	2 cut(s)	6, 1737
CspAI	ACCGGT	1 cut(s)	722
CviAII	CATG	6 cut(s)	949, 1219, 1306, 1742, 1753, 2048
DdeI	CTNAG	8 cut(s)	222, 288, 630, 710, 811, 933, 1523, 2064
DpnI	GATC	2 cut(s)	655, 696
DpnII	GATC	2 cut(s)	653, 694
DraI	TTTAAA	1 cut(s)	1089
DraIII	CACNNNGTG	1 cut(s)	924
DriI	GACNNNNNGTC	1 cut(s)	235
EaeI	YGGCCR	2 cut(s)	477, 1123
Eam1104I	CTCTTC	2 cut(s)	1538, 1701
Eam1105I	GACNNNNNGTC	1 cut(s)	235
EarI	CTCTTC	2 cut(s)	1538, 1701
EciI	GGCGGA	1 cut(s)	202
Ecl136II	GAGCTC	1 cut(s)	474
Eco130I	CCWWGG	1 cut(s)	1938
Eco24I	GRGCYC	1 cut(s)	476
Eco32I	GATATC	2 cut(s)	819, 1452
Eco47I	GGWCC	2 cut(s)	8, 2042
Eco53kI	GAGCTC	1 cut(s)	474
Eco57I	CTGAAG	2 cut(s)	1399, 1519
EcoICRI	GAGCTC	1 cut(s)	474
EcoO109I	RGGNCCY	2 cut(s)	8, 2042
EcoRI	GAATTC	2 cut(s)	295, 371
EcoRV	GATATC	2 cut(s)	819, 1452
EcoT14I	CCWWGG	1 cut(s)	1938
EcoT38I	GRGCYC	1 cut(s)	476
ErhI	CCWWGG	1 cut(s)	1938
Esp3I	CGTCTC	1 cut(s)	131
FaeI	CATG	6 cut(s)	952, 1222, 1309, 1745, 1756, 2051
FaqI	GGGAC	2 cut(s)	2055, 2106
FatI	CATG	6 cut(s)	948, 1218, 1305, 1741, 1752, 2047
FauI	CCCGC	1 cut(s)	32
FblI	GTMKAC	1 cut(s)	835
Fnu4HI	GCNGC	7 cut(s)	393, 516, 641, 891, 1083, 1722, 1734
FokI	GGATG	3 cut(s)	238, 367, 1091
FriOI	GRGCYC	1 cut(s)	476
Fsp4HI	GCNGC	7 cut(s)	393, 516, 641, 891, 1083, 1722, 1734
FspBI	CTAG	3 cut(s)	663, 972, 1895
GlaI	GCGC	6 cut(s)	415, 592, 639, 1732, 1857, 2118
GluI	GCNGC	7 cut(s)	393, 516, 641, 891, 1083, 1722, 1734
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	2 cut(s)	1349, 1394
HaeII	RGCGCY	1 cut(s)	1859
HaeIII	GGCC	4 cut(s)	119, 479, 947, 1125
HapII	CCGG	6 cut(s)	36, 67, 227, 257, 551, 723
HgaI	GACGC	2 cut(s)	6, 1737
HhaI	GCGC	6 cut(s)	416, 593, 640, 1733, 1858, 2119
Hin1II	CATG	6 cut(s)	952, 1222, 1309, 1745, 1756, 2051
Hin6I	GCGC	6 cut(s)	414, 591, 638, 1731, 1856, 2117
HinP1I	GCGC	6 cut(s)	414, 591, 638, 1731, 1856, 2117
HincII	GTYRAC	3 cut(s)	187, 1155, 1303
HindII	GTYRAC	3 cut(s)	187, 1155, 1303
HindIII	AAGCTT	1 cut(s)	452
HinfI	GANTC	6 cut(s)	43, 274, 989, 1294, 1438, 2123
HpaI	GTTAAC	1 cut(s)	187
HpaII	CCGG	6 cut(s)	36, 67, 227, 257, 551, 723
HphI	GGTGA	6 cut(s)	82, 502, 1220, 1234, 1361, 1826
Hpy166II	GTNNAC	9 cut(s)	187, 728, 836, 1155, 1303, 1411, 1515, 1610, 1892
Hpy188I	TCNGA	3 cut(s)	332, 653, 1526
Hpy8I	GTNNAC	9 cut(s)	187, 728, 836, 1155, 1303, 1411, 1515, 1610, 1892
Hpy99I	CGWCG	3 cut(s)	22, 305, 1731
HpyAV	CCTTC	8 cut(s)	97, 115, 202, 228, 412, 661, 937, 1554
HpyCH4IV	ACGT	4 cut(s)	209, 318, 583, 1381
HpyF10VI	GCNNNNNNNGC	6 cut(s)	197, 232, 863, 899, 1730, 1889
HpyF3I	CTNAG	8 cut(s)	222, 288, 630, 710, 811, 933, 1523, 2064
HpySE526I	ACGT	4 cut(s)	209, 318, 583, 1381
Hsp92II	CATG	6 cut(s)	952, 1222, 1309, 1745, 1756, 2051
HspAI	GCGC	6 cut(s)	414, 591, 638, 1731, 1856, 2117
KflI	GGGWCCC	2 cut(s)	8, 2042
KroI	GCCGGC	1 cut(s)	35
KroNI	GCCGGC	1 cut(s)	37
KspAI	GTTAAC	1 cut(s)	187
Kzo9I	GATC	2 cut(s)	653, 694
LguI	GCTCTTC	1 cut(s)	1538
LmnI	GCTCC	3 cut(s)	69, 854, 1389
Lsp1109I	GCAGC	5 cut(s)	379, 627, 877, 1069, 1745
LweI	GCATC	7 cut(s)	173, 387, 958, 1069, 1351, 1708, 2104
MaeI	CTAG	3 cut(s)	663, 972, 1895
MaeII	ACGT	4 cut(s)	209, 318, 583, 1381
MaeIII	GTNAC	9 cut(s)	344, 362, 544, 916, 1323, 1349, 1377, 1418, 1594
MalI	GATC	2 cut(s)	655, 696
MbiI	CCGCTC	1 cut(s)	1724
MboI	GATC	2 cut(s)	653, 694
MboII	GAAGA	5 cut(s)	664, 689, 1525, 1718, 2085
MfeI	CAATTG	1 cut(s)	2109
MhlI	GDGCHC	4 cut(s)	476, 859, 1635, 1894
MlyI	GAGTC	2 cut(s)	268, 1303
MmeI	TCCRAC	1 cut(s)	1471
MnlI	CCTC	9 cut(s)	59, 921, 1062, 1069, 1324, 1380, 1702, 1787, 1869
MroNI	GCCGGC	1 cut(s)	35
MroXI	GAANNNNTTC	2 cut(s)	671, 1019
MseI	TTAA	7 cut(s)	186, 1064, 1088, 1800, 1805, 1922, 2133
MslI	CAYNNNNRTG	2 cut(s)	1751, 1988
MspCI	CTTAAG	1 cut(s)	1799
MspI	CCGG	6 cut(s)	36, 67, 227, 257, 551, 723
MspR9I	CCNGG	2 cut(s)	257, 551
MunI	CAATTG	1 cut(s)	2109
Mva1269I	GAATGC	1 cut(s)	1844
MvnI	CGCG	5 cut(s)	17, 183, 416, 1590, 1731
MwoI	GCNNNNNNNGC	6 cut(s)	197, 232, 863, 899, 1730, 1889
NaeI	GCCGGC	1 cut(s)	37
NciI	CCSGG	2 cut(s)	257, 551
NdeII	GATC	2 cut(s)	653, 694
NgoMIV	GCCGGC	1 cut(s)	35
NlaIII	CATG	6 cut(s)	952, 1222, 1309, 1745, 1756, 2051
NlaIV	GGNNCC	6 cut(s)	9, 10, 438, 1495, 2043, 2044
NmeAIII	GCCGAG	1 cut(s)	455
NmuCI	GTSAC	3 cut(s)	916, 1349, 1594
NruI	TCGCGA	1 cut(s)	1590
NspV	TTCGAA	1 cut(s)	146
PagI	TCATGA	1 cut(s)	1752
PaqCI	CACCTGC	1 cut(s)	424
PciSI	GCTCTTC	1 cut(s)	1538
PctI	GAATGC	1 cut(s)	1844
PdiI	GCCGGC	1 cut(s)	37
PdmI	GAANNNNTTC	2 cut(s)	671, 1019
PfeI	GAWTC	4 cut(s)	43, 989, 1438, 2123
PinAI	ACCGGT	1 cut(s)	722
PkrI	GCNGC	7 cut(s)	394, 517, 642, 892, 1084, 1723, 1735
PleI	GAGTC	2 cut(s)	268, 1302
PpsI	GAGTC	2 cut(s)	268, 1302
Ppu21I	YACGTR	2 cut(s)	584, 1382
PpuMI	RGGWCCY	2 cut(s)	8, 2042
PsiI	TTATAA	1 cut(s)	998
Psp124BI	GAGCTC	1 cut(s)	476
Psp5II	RGGWCCY	2 cut(s)	8, 2042
PspFI	CCCAGC	1 cut(s)	4
PspN4I	GGNNCC	6 cut(s)	9, 10, 438, 1495, 2043, 2044
PspPI	GGNCC	3 cut(s)	8, 117, 2042
PspPPI	RGGWCCY	2 cut(s)	8, 2042
PstNI	CAGNNNCTG	3 cut(s)	890, 1297, 1327
RruI	TCGCGA	1 cut(s)	1590
RseI	CAYNNNNRTG	2 cut(s)	1751, 1988
SacI	GAGCTC	1 cut(s)	476
SapI	GCTCTTC	1 cut(s)	1538
SaqAI	TTAA	7 cut(s)	186, 1064, 1088, 1800, 1805, 1922, 2133
SatI	GCNGC	7 cut(s)	393, 516, 641, 891, 1083, 1722, 1734
Sau3AI	GATC	2 cut(s)	653, 694
Sau96I	GGNCC	3 cut(s)	8, 117, 2042
ScaI	AGTACT	2 cut(s)	1061, 1647
SchI	GAGTC	2 cut(s)	268, 1303
ScrFI	CCNGG	2 cut(s)	257, 551
SduI	GDGCHC	4 cut(s)	476, 859, 1635, 1894
SfaNI	GCATC	7 cut(s)	173, 387, 958, 1069, 1351, 1708, 2104
SfcI	CTRYAG	1 cut(s)	279
SfuI	TTCGAA	1 cut(s)	146
SinI	GGWCC	2 cut(s)	8, 2042
SmiMI	CAYNNNNRTG	2 cut(s)	1751, 1988
SmlI	CTYRAG	2 cut(s)	1601, 1799
SmoI	CTYRAG	2 cut(s)	1601, 1799
SspI	AATATT	3 cut(s)	1019, 1132, 1920
SspMI	CTAG	3 cut(s)	663, 972, 1895
SstI	GAGCTC	1 cut(s)	476
StyD4I	CCNGG	2 cut(s)	255, 549
StyI	CCWWGG	1 cut(s)	1938
TaiI	ACGT	4 cut(s)	212, 321, 586, 1384
TaqI	TCGA	8 cut(s)	20, 146, 303, 524, 715, 987, 1726, 1951
TatI	WGTACW	4 cut(s)	974, 1059, 1408, 1645
TauI	GCSGC	2 cut(s)	518, 1724
TfiI	GAWTC	4 cut(s)	43, 989, 1438, 2123
Tru1I	TTAA	7 cut(s)	186, 1064, 1088, 1800, 1805, 1922, 2133
Tru9I	TTAA	7 cut(s)	186, 1064, 1088, 1800, 1805, 1922, 2133
TscAI	CASTG	8 cut(s)	288, 487, 499, 929, 1504, 1839, 1990, 2000
TseFI	GTSAC	3 cut(s)	916, 1349, 1594
TseI	GCWGC	5 cut(s)	392, 640, 890, 1082, 1733
Tsp45I	GTSAC	3 cut(s)	916, 1349, 1594
TspGWI	ACGGA	4 cut(s)	146, 289, 329, 1627
TspRI	CASTG	8 cut(s)	288, 487, 499, 929, 1504, 1839, 1990, 2000
Vha464I	CTTAAG	1 cut(s)	1799
VneI	GTGCAC	1 cut(s)	1890
VpaK11BI	GGWCC	2 cut(s)	8, 2042
XapI	RAATTY	4 cut(s)	295, 371, 766, 848
XmiI	GTMKAC	1 cut(s)	835
XmnI	GAANNNNTTC	2 cut(s)	671, 1019
XspI	CTAG	3 cut(s)	663, 972, 1895
ZrmI	AGTACT	2 cut(s)	1061, 1647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.