Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0005696

Physical Location & Seq

Genomic Coordinates Reverse (-)

73937147 .. 73945295

Gene Structure 8149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG528700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGCTCGGTGCTACAGCGTCGAGGTTCTACAGAGTCACCGGCCTTCTCTTCCGTTCCCACCAACCCCTTCAAAGCCGCAACCTTTTCTCTCTCTCCCTCCCCAATTCCTCCATTTCCAAAACCTCCTTCCATGGAAACCCTATTCTTCTTCTTCCCCAAACAACATCCAGAAGAAGAATCATTCCTCTCCAAATCAACGCCTTCGTCTCCGGCACCTCCTCCTCCTCCTCCGCCCCTCCCAACGGCCGGGCCTGGCTATCCACTTCCGCGCAGGACCAGACCAATCCACGGCCTTTCGTCCCTAAAAAGACTCCCGACGAACAAGTCGACGACGTCCAGATCTTCCGGACGCTCGCCAGGTACTTGTGGATGAAAGACAACTATGAATTCCGGCTTAGGGTTCTTACTGCCGTGGGGTTTTTGGTTGGGGCTAAGGTGCTCAATGTTCAGGTGCCGTTTCTGTTCAAGCTCGCCGTGGATTGGTTGACCACGGCCACCGGAAATGCTGGTAGTTTTGCGGCGTTCTCTGCCGCCAATCCGACGCAGTTGGCTCTTTTCGCAACGCCTGCGTCGGTTTTGATTGGGTATGGCATTGCACGCTCTGGCGCTTCTGCTTTCAACGAATTGAGGACTGCTGTGTTTTCTAAGGTAGCATTGCGAACAATCCGATCAGTATCCAGGAAGGTCTTCTCACATTTGCATGACCTTGATCTTCGATATCATCTTAGTCGAGAAACCGGTGCACTAAATAGAATCATTGATCGTGGTAGCCGTGCTATAAATTTCATTCTCTCGTCTATGGTATTCAATGTTGTACCCACCATTTTAGAGATATCTATGGTTTCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATGGATAACATCGCTATCAGTTGCTGCATATATTGCATTTACATTGACTATTACACAGTGGAGGACGAAGTTCAGGAAGGCCATGAATAAGGCCGATAATGATGCTAGTACGAGGGCAATTGATTCACTTATTAATTATGAGACTGTCAAATATTTCAACAATGAAGGTTTTGAAGCTGATAAATATGACAAATACTTAAAGAGGTATGAGGATGCTGCCTTAAAAACACAACGTAGTCTTGCTTTTCTGAACTTCGGCCAAAGTATCATATTCAGCACAGCTTTATCAACGGCTATGGTGTTGTGTTCAAATGGTATTATGAATGGCAGTATGACAGTTGGTGATTTGGTCATGGTGAATGGACTTCTATTCCAGCTATCACTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACCATACAGAGCCTTGTTGACATGAAATCCATGTTTCAGTTACTGGAGGAAAGGGCTGAAATTAGAGACAAAGATGACGCAAAGCCTCTGCACCTAAGCGGGGGGAGCATTCAGTTTGACAACGTGCATTTCAGTTACCTAACGGAAAGAAAGATTCTTGATGGGATATCATTTCTTGTACCTGCTGGAAAGAGTGTGGCTATTGTTGGAACCAGCGGTAGTGGAAAGTCAACCATTCTCAGATTGCTGTTCAGGTTTTTTGACAGCCATTCCGGAAGTATAAGGATAGACGGTCAAGATATTCGAGATGTGACACTTGAGAGTTTGCGGAACTGTATTGGAGTTGTGCCGCAAGATACAGTACTTTTCAATGATACAATTTACCACAACATTCATTATGGCCGTCTTTCAGCAACAAAAGAAGAGGTGTATGAAGCTGCTCGACGTGCAGCAATACATGATACTATCATGAACTTTCCTGACAGATATTCCACTGAAGTGGGGGAACGGGGGCTCAAGTTGAGTGGTGGGGAGAAGCAGCGTGTGGCACTGGCTCGTGCATTCTTGAAAGCACCTCCAATTCTGTTATGTGATGAAGCTACAAGTGCACTAGATAGCACCACAGAAGCGGAAATATTAAGTGCATTGAAGTCCTTGGCAACCAACCGAACTTCAGTTTTCATTGCTCATAGGCTGACTACTGCAATGCAGTGCGATGAGATAATAGTTCTGGAGAATGGGCAAGTGGTTGAGCAGGGACCCCATGATGTTCTCTTGTCTAAGGCAGGAAGATATGCACAGCTCTGGGGACAGCAAAATAACACAGTTGATGCACTTGATGCCACCATCAAAACAGGGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006777 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006875 GO:0006879 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009657 GO:0009658 GO:0009889 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010288 GO:0010380 GO:0016020 GO:0016043 GO:0018130 GO:0019222 GO:0019538 GO:0019637 GO:0019720 GO:0019725 GO:0019866 GO:0022622 GO:0030003 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046916 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051186 GO:0051188 GO:0051189 GO:0051193 GO:0051276 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071840 GO:0090056 GO:0090407 GO:0098771 GO:0099402 GO:1901360 GO:1901362 GO:1901401 GO:1901463 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

720

Amino Acids

79.55

Weight (kDa)

9.41

Isoelectric Point (pI)

29.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	137 - 423	1.6e-37	ABC transporter transmembrane region
ABC_tran	PF00005	486 - 635	3.3e-32	ABC transporter
SMC_N	PF02463	498 - 677	1.4e-06	RecF/RecN/SMC N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28620 AT4G28630 AT5G58270
fragaria_vesca	FvH4_3g41120 FvH4_3g41120 FvH4_3g41120 FvH4_3g41120
malus_domestica	MD03G1047300.v1.1 MD11G1049800.v1.1
prunus_persica	Prupe.6G038500_v2.0.a1
pyrus_communis	pycom03g03730 pycom11g04040
rosa_chinensis	RchiOBHm_Chr5g0073901 RchiOBHm_Chr5g0073961
rosa_laevigata	RLG00000036423
rosa_multiflora	Rmu_sc0000470.1_g000016 Rmu_sc0000470.1_g000034
rosa_roxburghii	Rroxscaffold_1G00007470
rosa_rugosa	Rorug05G0427200
rosa_samantha	Rh5AG484200 Rh5AG484700 Rh5BG504900 Rh5BG505300 Rh5CG528700 Rh5CG529100 Rh5DG517200
rosa_wichuraiana	Rw0G006220 Rw5G045010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	323
AatII	GACGTC	1 cut(s)	336
Acc36I	ACCTGC	1 cut(s)	1489
AccB1I	GGYRCC	2 cut(s)	212, 451
AccI	GTMKAC	2 cut(s)	327, 850
AccII	CGCG	1 cut(s)	269
AccIII	TCCGGA	2 cut(s)	345, 1571
AcoI	YGGCCR	4 cut(s)	244, 492, 1138, 1699
AcsI	RAATTY	3 cut(s)	386, 781, 863
AcuI	CTGAAG	2 cut(s)	1815, 1956
AcyI	GRCGYC	1 cut(s)	333
AfaI	GTAC	5 cut(s)	362, 816, 991, 1479, 1662
AfiI	CCNNNNNNNGG	6 cut(s)	242, 246, 288, 397, 480, 1399
AgeI	ACCGGT	1 cut(s)	737
AjiI	CACGTC	1 cut(s)	1745
AjnI	CCWGG	3 cut(s)	251, 356, 677
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AleI	CACNNNNGTG	1 cut(s)	1796
AluBI	AGCT	7 cut(s)	469, 1058, 1163, 1258, 1736, 1898, 2101
AluI	AGCT	7 cut(s)	469, 1058, 1163, 1258, 1736, 1898, 2101
Alw21I	GWGCWC	4 cut(s)	441, 745, 874, 1909
Alw26I	GTCTC	4 cut(s)	211, 1016, 1292, 1359
Alw44I	GTGCAC	2 cut(s)	741, 1905
AlwNI	CAGNNNCTG	2 cut(s)	905, 1342
Aor13HI	TCCGGA	2 cut(s)	345, 1571
AoxI	GGCC	9 cut(s)	40, 244, 249, 290, 492, 960, 972, 1138, 1699
ApaLI	GTGCAC	2 cut(s)	741, 1905
ApeKI	GCWGC	5 cut(s)	905, 1097, 1736, 1748, 1837
ApoI	RAATTY	3 cut(s)	386, 781, 863
AseI	ATTAAT	1 cut(s)	1014
AsiGI	ACCGGT	1 cut(s)	737
Asp700I	GAANNNNTTC	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	271, 608
AspS9I	GGNCC	3 cut(s)	249, 274, 2057
AsuC2I	CCSGG	1 cut(s)	248
AsuHPI	GGTGA	3 cut(s)	28, 1235, 1249
AvaII	GGWCC	2 cut(s)	274, 2057
BaeGI	GKGCMC	2 cut(s)	745, 1909
BanI	GGYRCC	2 cut(s)	212, 451
BanII	GRGCYC	1 cut(s)	1815
BauI	CACGAG	1 cut(s)	1854
BbsI	GAAGAC	1 cut(s)	679
Bbv12I	GWGCWC	4 cut(s)	441, 745, 874, 1909
BbvI	GCAGC	5 cut(s)	892, 1084, 1723, 1760, 1849
BccI	CCATC	2 cut(s)	1454, 2153
BceAI	ACGGC	9 cut(s)	259, 305, 395, 439, 458, 507, 756, 1188, 1686
BcgI	CGANNNNNNTGC	2 cut(s)	965, 999
BciT130I	CCWGG	3 cut(s)	253, 358, 679
BciVI	GTATCC	1 cut(s)	685
BcnI	CCSGG	1 cut(s)	248
BcoDI	GTCTC	4 cut(s)	211, 1016, 1292, 1359
BfaI	CTAG	2 cut(s)	987, 1910
BfmI	CTRYAG	2 cut(s)	12, 28
BfoI	RGCGCY	1 cut(s)	609
BfuAI	ACCTGC	1 cut(s)	1489
BfuI	GTATCC	1 cut(s)	685
BglII	AGATCT	1 cut(s)	339
BisI	GCNGC	9 cut(s)	76, 519, 531, 906, 1098, 1649, 1737, 1749, 1838
BlsI	GCNGC	9 cut(s)	77, 520, 532, 907, 1099, 1650, 1738, 1750, 1839
BmcAI	AGTACT	1 cut(s)	1662
Bme1390I	CCNGG	4 cut(s)	248, 253, 358, 679
Bme18I	GGWCC	2 cut(s)	274, 2057
BmgBI	CACGTC	1 cut(s)	1745
BmgT120I	GGNCC	3 cut(s)	249, 274, 2057
BmiI	GGNNCC	5 cut(s)	214, 453, 1510, 2058, 2059
BmrFI	CCNGG	4 cut(s)	248, 253, 358, 679
BmsI	GCATC	4 cut(s)	973, 1084, 2119, 2128
BpiI	GAAGAC	1 cut(s)	679
BpmI	CTGGAG	2 cut(s)	1364, 2051
Bpu10I	CCTNAGC	3 cut(s)	395, 432, 1394
BpuEI	CTTGAG	2 cut(s)	1637, 1799
BpuMI	CCSGG	1 cut(s)	248
BsaBI	GATNNNNATC	1 cut(s)	673
BsaHI	GRCGYC	1 cut(s)	333
BsaI	GGTCTC	1 cut(s)	1292
BsaJI	CCNNGG	7 cut(s)	130, 287, 411, 474, 489, 1279, 1953
BsaWI	WCCGGW	4 cut(s)	345, 497, 737, 1571
Bsc4I	CCNNNNNNNGG	6 cut(s)	242, 246, 288, 397, 480, 1399
Bse118I	RCCGGY	2 cut(s)	38, 737
Bse1I	ACTGG	3 cut(s)	858, 1347, 1854
Bse3DI	GCAATG	4 cut(s)	591, 653, 1980, 2010
Bse8I	GATNNNNATC	1 cut(s)	673
BseAI	TCCGGA	2 cut(s)	345, 1571
BseBI	CCWGG	3 cut(s)	253, 358, 679
BseDI	CCNNGG	7 cut(s)	130, 287, 411, 474, 489, 1279, 1953
BseGI	GGATG	3 cut(s)	164, 375, 1099
BseJI	GATNNNNATC	1 cut(s)	673
BseLI	CCNNNNNNNGG	6 cut(s)	242, 246, 288, 397, 480, 1399
BseMI	GCAATG	4 cut(s)	591, 653, 1980, 2010
BseMII	CTCAG	1 cut(s)	1552
BseNI	ACTGG	3 cut(s)	858, 1347, 1854
BseRI	GAGGAG	4 cut(s)	208, 211, 214, 217
BseSI	GKGCMC	2 cut(s)	745, 1909
BseX3I	CGGCCG	1 cut(s)	244
BseXI	GCAGC	5 cut(s)	892, 1084, 1723, 1760, 1849
BsgI	GTGCAG	2 cut(s)	1373, 1767
Bsh1236I	CGCG	1 cut(s)	269
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
BshNI	GGYRCC	2 cut(s)	212, 451
BshTI	ACCGGT	1 cut(s)	737
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	4 cut(s)	441, 745, 874, 1909
BsiSI	CCGG	8 cut(s)	39, 210, 247, 346, 391, 498, 738, 1572
BslFI	GGGAC	3 cut(s)	284, 2070, 2121
BslI	CCNNNNNNNGG	6 cut(s)	242, 246, 288, 397, 480, 1399
BsmAI	GTCTC	4 cut(s)	211, 1016, 1292, 1359
BsmBI	CGTCTC	1 cut(s)	211
BsmFI	GGGAC	3 cut(s)	284, 2070, 2121
BsmI	GAATGC	2 cut(s)	1407, 1859
BsnI	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
Bso31I	GGTCTC	1 cut(s)	1292
Bsp1286I	GDGCHC	5 cut(s)	441, 745, 874, 1815, 1909
Bsp13I	TCCGGA	2 cut(s)	345, 1571
Bsp143I	GATC	4 cut(s)	339, 668, 709, 760
Bsp19I	CCATGG	1 cut(s)	130
BspANI	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
BspCNI	CTCAG	1 cut(s)	1551
BspEI	TCCGGA	2 cut(s)	345, 1571
BspFNI	CGCG	1 cut(s)	269
BspHI	TCATGA	1 cut(s)	1767
BspLI	GGNNCC	5 cut(s)	214, 453, 1510, 2058, 2059
BspMI	ACCTGC	1 cut(s)	1489
BspT107I	GGYRCC	2 cut(s)	212, 451
BspTNI	GGTCTC	1 cut(s)	1292
BsrDI	GCAATG	4 cut(s)	591, 653, 1980, 2010
BsrFI	RCCGGY	2 cut(s)	38, 737
BsrI	ACTGG	3 cut(s)	858, 1347, 1854
BssAI	RCCGGY	2 cut(s)	38, 737
BssECI	CCNNGG	7 cut(s)	130, 287, 411, 474, 489, 1279, 1953
BssMI	GATC	4 cut(s)	339, 668, 709, 760
BssNAI	GTATAC	1 cut(s)	851
BssNI	GRCGYC	1 cut(s)	333
BssSI	CACGAG	1 cut(s)	1854
BssT1I	CCWWGG	3 cut(s)	130, 1279, 1953
Bst1107I	GTATAC	1 cut(s)	851
Bst2BI	CACGAG	1 cut(s)	1854
Bst2UI	CCWGG	3 cut(s)	253, 358, 679
Bst4CI	ACNGT	7 cut(s)	939, 1027, 1219, 1592, 1634, 1660, 2125
Bst6I	CTCTTC	2 cut(s)	53, 1716
BstACI	GRCGYC	1 cut(s)	333
BstAPI	GCANNNNNTGC	4 cut(s)	566, 878, 914, 2138
BstC8I	GCNNGC	4 cut(s)	354, 471, 567, 598
BstDEI	CTNAG	7 cut(s)	395, 432, 645, 725, 1394, 1538, 2079
BstDSI	CCRYGG	5 cut(s)	130, 287, 411, 474, 489
BstF5I	GGATG	3 cut(s)	164, 375, 1099
BstFNI	CGCG	1 cut(s)	269
BstH2I	RGCGCY	1 cut(s)	609
BstHHI	GCGC	2 cut(s)	271, 608
BstKTI	GATC	4 cut(s)	342, 671, 712, 763
BstMAI	GTCTC	4 cut(s)	211, 1016, 1292, 1359
BstMBI	GATC	4 cut(s)	339, 668, 709, 760
BstMCI	CGRYCG	1 cut(s)	247
BstNI	CCWGG	3 cut(s)	253, 358, 679
BstSCI	CCNGG	4 cut(s)	246, 251, 356, 677
BstSFI	CTRYAG	2 cut(s)	12, 28
BstSLI	GKGCMC	2 cut(s)	745, 1909
BstUI	CGCG	1 cut(s)	269
BstV1I	GCAGC	5 cut(s)	892, 1084, 1723, 1760, 1849
BstV2I	GAAGAC	1 cut(s)	679
BstX2I	RGATCY	1 cut(s)	339
BstXI	CCANNNNNNTGG	1 cut(s)	1798
BstYI	RGATCY	1 cut(s)	339
BstZ17I	GTATAC	1 cut(s)	851
BstZI	CGGCCG	1 cut(s)	244
BsuI	GTATCC	1 cut(s)	685
BsuRI	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
BtgI	CCRYGG	5 cut(s)	130, 287, 411, 474, 489
BtgZI	GCGATG	2 cut(s)	876, 2028
BtrI	CACGTC	1 cut(s)	1745
BtsCI	GGATG	3 cut(s)	164, 375, 1099
BtsI	GCAGTG	1 cut(s)	2015
BtsIMutI	CAGTG	4 cut(s)	944, 1791, 1847, 2015
BveI	ACCTGC	1 cut(s)	1489
Cac8I	GCNNGC	4 cut(s)	354, 471, 567, 598
CaiI	CAGNNNCTG	2 cut(s)	905, 1342
CciI	TCATGA	1 cut(s)	1767
CfoI	GCGC	2 cut(s)	271, 608
Cfr10I	RCCGGY	2 cut(s)	38, 737
Cfr13I	GGNCC	3 cut(s)	249, 274, 2057
CseI	GACGC	5 cut(s)	6, 358, 550, 558, 1385
Csp6I	GTAC	5 cut(s)	361, 815, 990, 1478, 1661
CspAI	ACCGGT	1 cut(s)	737
CspCI	CAANNNNNGTGG	2 cut(s)	1804, 1839
CviQI	GTAC	5 cut(s)	361, 815, 990, 1478, 1661
DdeI	CTNAG	7 cut(s)	395, 432, 645, 725, 1394, 1538, 2079
DpnI	GATC	4 cut(s)	341, 670, 711, 762
DpnII	GATC	4 cut(s)	339, 668, 709, 760
DrdI	GACNNNNNNGTC	1 cut(s)	323
DseDI	GACNNNNNNGTC	1 cut(s)	323
EaeI	YGGCCR	4 cut(s)	244, 492, 1138, 1699
EagI	CGGCCG	1 cut(s)	244
Eam1104I	CTCTTC	2 cut(s)	53, 1716
EarI	CTCTTC	2 cut(s)	53, 1716
EciI	GGCGGA	1 cut(s)	220
EclXI	CGGCCG	1 cut(s)	244
Eco130I	CCWWGG	3 cut(s)	130, 1279, 1953
Eco24I	GRGCYC	1 cut(s)	1815
Eco31I	GGTCTC	1 cut(s)	1292
Eco32I	GATATC	3 cut(s)	719, 834, 1467
Eco47I	GGWCC	2 cut(s)	274, 2057
Eco52I	CGGCCG	1 cut(s)	244
Eco57I	CTGAAG	2 cut(s)	1815, 1956
EcoO109I	RGGNCCY	1 cut(s)	2057
EcoRI	GAATTC	1 cut(s)	386
EcoRII	CCWGG	3 cut(s)	251, 356, 677
EcoRV	GATATC	3 cut(s)	719, 834, 1467
EcoT14I	CCWWGG	3 cut(s)	130, 1279, 1953
EcoT38I	GRGCYC	1 cut(s)	1815
ErhI	CCWWGG	3 cut(s)	130, 1279, 1953
Esp3I	CGTCTC	1 cut(s)	211
FaqI	GGGAC	3 cut(s)	284, 2070, 2121
FauI	CCCGC	1 cut(s)	1391
FblI	GTMKAC	2 cut(s)	327, 850
Fnu4HI	GCNGC	9 cut(s)	76, 519, 531, 906, 1098, 1649, 1737, 1749, 1838
FokI	GGATG	3 cut(s)	151, 382, 1106
FriOI	GRGCYC	1 cut(s)	1815
Fsp4HI	GCNGC	9 cut(s)	76, 519, 531, 906, 1098, 1649, 1737, 1749, 1838
FspBI	CTAG	2 cut(s)	987, 1910
GlaI	GCGC	2 cut(s)	270, 607
GluI	GCNGC	9 cut(s)	76, 519, 531, 906, 1098, 1649, 1737, 1749, 1838
GsuI	CTGGAG	2 cut(s)	1364, 2051
HaeII	RGCGCY	1 cut(s)	609
HaeIII	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
HapII	CCGG	8 cut(s)	39, 210, 247, 346, 391, 498, 738, 1572
HgaI	GACGC	5 cut(s)	6, 358, 550, 558, 1385
HhaI	GCGC	2 cut(s)	271, 608
Hin1I	GRCGYC	1 cut(s)	333
Hin6I	GCGC	2 cut(s)	269, 606
HinP1I	GCGC	2 cut(s)	269, 606
HincII	GTYRAC	4 cut(s)	328, 486, 1318, 1530
HindII	GTYRAC	4 cut(s)	328, 486, 1318, 1530
HinfI	GANTC	6 cut(s)	33, 177, 310, 753, 1004, 1453
HpaII	CCGG	8 cut(s)	39, 210, 247, 346, 391, 498, 738, 1572
HphI	GGTGA	3 cut(s)	28, 1235, 1249
Hpy166II	GTNNAC	7 cut(s)	328, 486, 743, 851, 1318, 1530, 1907
Hpy188I	TCNGA	4 cut(s)	540, 668, 1131, 1541
Hpy8I	GTNNAC	7 cut(s)	328, 486, 743, 851, 1318, 1530, 1907
Hpy99I	CGWCG	7 cut(s)	22, 320, 332, 335, 544, 574, 1746
HpyAV	CCTTC	7 cut(s)	53, 77, 136, 211, 676, 952, 1040
HpyCH4III	ACNGT	7 cut(s)	939, 1027, 1219, 1592, 1634, 1660, 2125
HpyCH4IV	ACGT	4 cut(s)	333, 1114, 1422, 1744
HpyF3I	CTNAG	7 cut(s)	395, 432, 645, 725, 1394, 1538, 2079
HpySE526I	ACGT	4 cut(s)	333, 1114, 1422, 1744
Hsp92I	GRCGYC	1 cut(s)	333
HspAI	GCGC	2 cut(s)	269, 606
KflI	GGGWCCC	1 cut(s)	2057
Kpn2I	TCCGGA	2 cut(s)	345, 1571
Kzo9I	GATC	4 cut(s)	339, 668, 709, 760
LmnI	GCTCC	2 cut(s)	869, 1404
Lsp1109I	GCAGC	5 cut(s)	892, 1084, 1723, 1760, 1849
LweI	GCATC	4 cut(s)	973, 1084, 2119, 2128
MaeI	CTAG	2 cut(s)	987, 1910
MaeII	ACGT	4 cut(s)	333, 1114, 1422, 1744
MaeIII	GTNAC	4 cut(s)	34, 1338, 1433, 1609
MalI	GATC	4 cut(s)	341, 670, 711, 762
MboI	GATC	4 cut(s)	339, 668, 709, 760
MfeI	CAATTG	1 cut(s)	999
MflI	RGATCY	1 cut(s)	339
MhlI	GDGCHC	5 cut(s)	441, 745, 874, 1815, 1909
MlyI	GAGTC	2 cut(s)	42, 304
MmeI	TCCRAC	2 cut(s)	563, 1486
MroI	TCCGGA	2 cut(s)	345, 1571
MroXI	GAANNNNTTC	1 cut(s)	686
MseI	TTAA	4 cut(s)	1014, 1079, 1103, 1937
MslI	CAYNNNNRTG	2 cut(s)	699, 1796
MspA1I	CMGCKG	1 cut(s)	1515
MspI	CCGG	8 cut(s)	39, 210, 247, 346, 391, 498, 738, 1572
MspR9I	CCNGG	4 cut(s)	248, 253, 358, 679
MunI	CAATTG	1 cut(s)	999
Mva1269I	GAATGC	2 cut(s)	1407, 1859
MvaI	CCWGG	3 cut(s)	253, 358, 679
MvnI	CGCG	1 cut(s)	269
NciI	CCSGG	1 cut(s)	248
NcoI	CCATGG	1 cut(s)	130
NdeII	GATC	4 cut(s)	339, 668, 709, 760
NlaIV	GGNNCC	5 cut(s)	214, 453, 1510, 2058, 2059
NmuCI	GTSAC	2 cut(s)	34, 1609
OliI	CACNNNNGTG	1 cut(s)	1796
PagI	TCATGA	1 cut(s)	1767
PcsI	WCGNNNNNNNCGW	2 cut(s)	324, 769
PctI	GAATGC	2 cut(s)	1407, 1859
PdmI	GAANNNNTTC	1 cut(s)	686
PfeI	GAWTC	4 cut(s)	177, 753, 1004, 1453
PflFI	GACNNNGTC	1 cut(s)	332
PfoI	TCCNGGA	1 cut(s)	677
PinAI	ACCGGT	1 cut(s)	737
PkrI	GCNGC	9 cut(s)	77, 520, 532, 907, 1099, 1650, 1738, 1750, 1839
PleI	GAGTC	2 cut(s)	41, 304
PpsI	GAGTC	2 cut(s)	41, 304
PpuMI	RGGWCCY	1 cut(s)	2057
PshBI	ATTAAT	1 cut(s)	1014
Psp5II	RGGWCCY	1 cut(s)	2057
Psp6I	CCWGG	3 cut(s)	251, 356, 677
PspGI	CCWGG	3 cut(s)	251, 356, 677
PspN4I	GGNNCC	5 cut(s)	214, 453, 1510, 2058, 2059
PspPI	GGNCC	3 cut(s)	249, 274, 2057
PspPPI	RGGWCCY	1 cut(s)	2057
PstNI	CAGNNNCTG	2 cut(s)	905, 1342
PsuI	RGATCY	1 cut(s)	339
PsyI	GACNNNGTC	1 cut(s)	332
RsaI	GTAC	5 cut(s)	362, 816, 991, 1479, 1662
RsaNI	GTAC	5 cut(s)	361, 815, 990, 1478, 1661
RseI	CAYNNNNRTG	2 cut(s)	699, 1796
SalI	GTCGAC	1 cut(s)	326
SaqAI	TTAA	4 cut(s)	1014, 1079, 1103, 1937
SatI	GCNGC	9 cut(s)	76, 519, 531, 906, 1098, 1649, 1737, 1749, 1838
Sau3AI	GATC	4 cut(s)	339, 668, 709, 760
Sau96I	GGNCC	3 cut(s)	249, 274, 2057
ScaI	AGTACT	1 cut(s)	1662
SchI	GAGTC	2 cut(s)	42, 304
ScrFI	CCNGG	4 cut(s)	248, 253, 358, 679
SduI	GDGCHC	5 cut(s)	441, 745, 874, 1815, 1909
SfaNI	GCATC	4 cut(s)	973, 1084, 2119, 2128
SfcI	CTRYAG	2 cut(s)	12, 28
SinI	GGWCC	2 cut(s)	274, 2057
SmiMI	CAYNNNNRTG	2 cut(s)	699, 1796
SmlI	CTYRAG	2 cut(s)	1616, 1814
SmoI	CTYRAG	2 cut(s)	1616, 1814
SspI	AATATT	2 cut(s)	1034, 1935
SspMI	CTAG	2 cut(s)	987, 1910
StyD4I	CCNGG	4 cut(s)	246, 251, 356, 677
StyI	CCWWGG	3 cut(s)	130, 1279, 1953
TaaI	ACNGT	7 cut(s)	939, 1027, 1219, 1592, 1634, 1660, 2125
TaiI	ACGT	4 cut(s)	336, 1117, 1425, 1747
TaqI	TCGA	6 cut(s)	20, 327, 715, 730, 1603, 1741
TatI	WGTACW	1 cut(s)	1660
TauI	GCSGC	4 cut(s)	78, 521, 533, 1651
TfiI	GAWTC	4 cut(s)	177, 753, 1004, 1453
Tru1I	TTAA	4 cut(s)	1014, 1079, 1103, 1937
Tru9I	TTAA	4 cut(s)	1014, 1079, 1103, 1937
TscAI	CASTG	4 cut(s)	944, 1798, 1854, 2015
TseFI	GTSAC	2 cut(s)	34, 1609
TseI	GCWGC	5 cut(s)	905, 1097, 1736, 1748, 1837
Tsp45I	GTSAC	2 cut(s)	34, 1609
TspGWI	ACGGA	2 cut(s)	41, 1457
TspRI	CASTG	4 cut(s)	944, 1798, 1854, 2015
Tth111I	GACNNNGTC	1 cut(s)	332
VneI	GTGCAC	2 cut(s)	741, 1905
VpaK11BI	GGWCC	2 cut(s)	274, 2057
VspI	ATTAAT	1 cut(s)	1014
XapI	RAATTY	3 cut(s)	386, 781, 863
XmiI	GTMKAC	2 cut(s)	327, 850
XmnI	GAANNNNTTC	1 cut(s)	686
XspI	CTAG	2 cut(s)	987, 1910
ZraI	GACGTC	1 cut(s)	334
ZrmI	AGTACT	1 cut(s)	1662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.