Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0005696

Physical Location & Seq

Genomic Coordinates Forward (+)

3799669 .. 3808498

Gene Structure 8830 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1047300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGCTGGGTTCCACCGCGTCGAAGTGGTACAAAGTCGGCGGGCTTCTCCTCCACCACAAACCCCACCGGAGCTTCAATTCAACCGCCTTCGCCGCCAGAACCGCCTTCCACGGCAGCCCCATTCGTCTCCCAAAGCCTTTGACTTCGAACCCTGTCCGCACAGCATCAATACTCCCCTTCCGCATCAACGCCTTTATCGCCGATGCCACATCCGCCCCTTCTCCGCCGGACGGGCGGTCATTGTTCTCCACTTTGCCGGACAAGAACAACCCGACTCCTAGAGTTTCTAAAGGGAATTCCGTCGAACAGATTACGAACGTGCAGATTTTCCGAACTCTCGCCAGTTACTTGTGGATGAAAGATAACTATGAGTTCCGCATCAGGGTCATTGCTGCGTTGGGGTTCTTGGTTGGAGCGAAGGTCCTCAATGTGCAGGTGCCCTTCCTTTTCAAGCTTGCTGTTGATTGGTTGAGCTCAGCTACTGGCAATGCCACTGCTCTGGCTTCTTTCACCGCAGCCAATTCGACCCAATTGGCGCTTTTTGCAACCCCGGCTTCCGTTTTGATTGGATATGGGATTGCACGTACTTGTGCTTCTGCTTTCAACGAATTGCGGACTGCCGTGTTTTCTAAGGTAGCGCTGCGAACAATCCGATCGGTATCTAGGAAGGTCTTCTCTCATCTGCACGACCTTGATCTTCGATATCATCTTAGTCGAGAAACTGGTGCACTAAATAGAATAATTGACCGTGGTAGCCGAGCAATAAATTTTATTCTCTCATCTATGGTGTTCAACGTTGTACCCACCATCTTAGAGATATCTATGGTTTCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATGGATAACTTCACTATCAGTTGCTGCTTATGTCGCATTTACATTGGCTGTCACACAGTGGAGGACTAAGTTTAGGAAGGCCATGAATAAGGCTGATAATGATGCTAGTACAAGGGCAATCGATTCACTTATAAATTATGAGACTGTGAAATATTTCAATAACGAATCTTTTGAAGCCACGAAATATGACGAGTATTTAAAGAGGTATGAGGATGCTGCTTTAAAAACACAACGCAGTCTGGCTTTTCTGAACTTCGGCCAAAATATTATATTTAGCACGGCTCTATCAACTGCTATGGTGTTGTGTTCAAATGGTATTATGAGTGGCAATATGACAGTTGGTGATTTGGTAATGGTGAATGGACTTCTATTCCAGCTCTCGCTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACTATACAGAGTCTGGTTGACATGAAATCTATGTTTCAGTTACTGGAGGAAAAGGTTGAAATTGGTGACAAAGCTGATGCAAAGCCTCTGGAGTTACGCGGGGGAAGCATTGAGTTTGACAGTGTACACTTCAGTTACCTGACAGAAAGGAAGATTCTTGGTGGGATATCATTTGTTGTAGCTGCTGGAAAGAGTGTGGCTATCGTTGGAACCAGCGGAAGTGGCAAGTCCACCATTCTCAGATTGCTCTTCAGGTTCTTTGACACCCATTCTGGAAGTATAAGGATAGATGGTCAAGATATTCGGGATGTGACACTTGAGAGTCTACGGAAGTCTATTGGTGTTGTGCCCCAAGATACAGTGCTTTTCAATGATACGATATTTCACAACATTCATTATGGTAATCTTTCAGCACCAAAAGAAGAGGTGTATGATGCCGCCCGACGTGCAGCAATACATGACACTATCATGAAGTTCCCTGACAAGTATTCTACTGTCGTAGGGGAACGAGGGCTCAAGTTAAGTGGTGGTGAGAAACAGCGTGTGGCACTGGCTCGTGCATTCTTGAAAGCACCTCCAATTCTTTTATGTGATGAAGCTACGAGTGCACTAGATAGCACCACAGAAGCAGAAATATTAACTGCATTGAAGTCCTTGGCAACTAATCGAACATCAATTTTCATTGCCCATAGGCTAACCACTGCAATGCAGTGCAATGAGATTATAGTTCTGGAGAACGGGAAAGTAGTTGAGCAGGGATCCCATGATGTTCTCTTGTCTAAGGCAGGACGATATGCACAGCTCTGGGGACAGCAAAATAACACAATTGATGCACTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006777 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006875 GO:0006879 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009657 GO:0009658 GO:0009889 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010288 GO:0010380 GO:0016020 GO:0016043 GO:0018130 GO:0019222 GO:0019538 GO:0019637 GO:0019720 GO:0019725 GO:0019866 GO:0022622 GO:0030003 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046916 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051186 GO:0051188 GO:0051189 GO:0051193 GO:0051276 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071840 GO:0090056 GO:0090407 GO:0098771 GO:0099402 GO:1901360 GO:1901362 GO:1901401 GO:1901463 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

709

Amino Acids

77.79

Weight (kDa)

9.49

Isoelectric Point (pI)

27.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	130 - 418	7.1e-38	ABC transporter transmembrane region
ABC_tran	PF00005	482 - 630	6.3e-33	ABC transporter
SMC_N	PF02463	494 - 671	6.3e-07	RecF/RecN/SMC N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28620 AT4G28630 AT5G58270
fragaria_vesca	FvH4_3g41120 FvH4_3g41120 FvH4_3g41120 FvH4_3g41120
malus_domestica	MD03G1047300.v1.1 MD11G1049800.v1.1
prunus_persica	Prupe.6G038500_v2.0.a1
pyrus_communis	pycom03g03730 pycom11g04040
rosa_chinensis	RchiOBHm_Chr5g0073901 RchiOBHm_Chr5g0073961
rosa_laevigata	RLG00000036423
rosa_multiflora	Rmu_sc0000470.1_g000016 Rmu_sc0000470.1_g000034
rosa_roxburghii	Rroxscaffold_1G00007470
rosa_rugosa	Rorug05G0427200
rosa_samantha	Rh5AG484200 Rh5AG484700 Rh5BG504900 Rh5BG505300 Rh5CG528700 Rh5CG529100 Rh5DG517200
rosa_wichuraiana	Rw0G006220 Rw5G045010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	998
AarI	CACCTGC	1 cut(s)	424
Acc36I	ACCTGC	1 cut(s)	424
AccB1I	GGYRCC	1 cut(s)	436
AccI	GTMKAC	2 cut(s)	835, 1609
AccII	CGCG	2 cut(s)	17, 1383
AclI	AACGTT	1 cut(s)	795
AclWI	GGATC	2 cut(s)	2037, 2050
AcoI	YGGCCR	1 cut(s)	1123
AcsI	RAATTY	3 cut(s)	295, 766, 848
AcuI	CTGAAG	2 cut(s)	1399, 1519
AdeI	CACNNNGTG	1 cut(s)	924
AfaI	GTAC	5 cut(s)	29, 586, 801, 976, 1410
AfeI	AGCGCT	1 cut(s)	639
AfiI	CCNNNNNNNGG	2 cut(s)	230, 382
AhdI	GACNNNNNGTC	1 cut(s)	235
AjiI	CACGTC	1 cut(s)	1730
AluBI	AGCT	9 cut(s)	72, 454, 474, 479, 1243, 1358, 1466, 1883, 2086
AluI	AGCT	9 cut(s)	72, 454, 474, 479, 1243, 1358, 1466, 1883, 2086
Alw21I	GWGCWC	4 cut(s)	476, 730, 859, 1894
Alw26I	GTCTC	3 cut(s)	131, 1001, 1277
Alw44I	GTGCAC	2 cut(s)	726, 1890
AlwI	GGATC	2 cut(s)	2037, 2050
AlwNI	CAGNNNCTG	4 cut(s)	482, 890, 1297, 1327
Aor51HI	AGCGCT	1 cut(s)	639
AoxI	GGCC	2 cut(s)	945, 1123
ApaLI	GTGCAC	2 cut(s)	726, 1890
ApeKI	GCWGC	8 cut(s)	114, 392, 515, 640, 890, 1082, 1466, 1733
ApoI	RAATTY	3 cut(s)	295, 766, 848
Asp700I	GAANNNNTTC	2 cut(s)	671, 1019
AspLEI	GCGC	2 cut(s)	538, 640
AspS9I	GGNCC	1 cut(s)	421
AsuC2I	CCSGG	1 cut(s)	551
AsuHPI	GGTGA	5 cut(s)	502, 1220, 1234, 1361, 1826
AsuII	TTCGAA	1 cut(s)	146
AvaII	GGWCC	1 cut(s)	421
BaeGI	GKGCMC	4 cut(s)	441, 730, 1635, 1894
BamHI	GGATCC	1 cut(s)	2042
BanI	GGYRCC	1 cut(s)	436
BanII	GRGCYC	2 cut(s)	476, 1800
BarI	GAAGNNNNNNTAC	2 cut(s)	577, 609
BauI	CACGAG	1 cut(s)	1839
BbsI	GAAGAC	1 cut(s)	664
Bbv12I	GWGCWC	4 cut(s)	476, 730, 859, 1894
BbvI	GCAGC	8 cut(s)	126, 379, 527, 627, 877, 1069, 1453, 1745
BccI	CCATC	2 cut(s)	815, 1568
BceAI	ACGGC	3 cut(s)	127, 605, 1161
BcgI	CGANNNNNNTGC	2 cut(s)	504, 538
BcnI	CCSGG	1 cut(s)	551
BcoDI	GTCTC	3 cut(s)	131, 1001, 1277
BfaI	CTAG	4 cut(s)	279, 663, 972, 1895
BfoI	RGCGCY	2 cut(s)	539, 641
BfuAI	ACCTGC	1 cut(s)	424
BglI	GCCNNNNNGGC	1 cut(s)	232
BlpI	GCTNAGC	1 cut(s)	475
Bme1390I	CCNGG	1 cut(s)	551
Bme18I	GGWCC	1 cut(s)	421
BmeRI	GACNNNNNGTC	1 cut(s)	235
BmgBI	CACGTC	1 cut(s)	1730
BmgT120I	GGNCC	1 cut(s)	421
BmiI	GGNNCC	4 cut(s)	10, 438, 1495, 2044
BmrFI	CCNGG	1 cut(s)	551
BmsI	GCATC	9 cut(s)	173, 192, 193, 387, 958, 1069, 1351, 1708, 2104
BpiI	GAAGAC	1 cut(s)	664
BpmI	CTGGAG	3 cut(s)	1349, 1394, 2036
Bpu1102I	GCTNAGC	1 cut(s)	475
Bpu14I	TTCGAA	1 cut(s)	146
BpuEI	CTTGAG	2 cut(s)	1622, 1784
BpuMI	CCSGG	1 cut(s)	551
Bsa29I	ATCGAT	1 cut(s)	987
BsaAI	YACGTR	1 cut(s)	584
BsaBI	GATNNNNATC	1 cut(s)	658
BsaJI	CCNNGG	5 cut(s)	109, 549, 748, 1264, 1938
BsaWI	WCCGGW	1 cut(s)	66
BsaXI	ACNNNNNCTCC	2 cut(s)	405, 435
Bsc4I	CCNNNNNNNGG	2 cut(s)	230, 382
Bse1I	ACTGG	6 cut(s)	342, 487, 727, 843, 1332, 1839
Bse3DI	GCAATG	5 cut(s)	387, 493, 1965, 1995, 2005
Bse8I	GATNNNNATC	1 cut(s)	658
BseCI	ATCGAT	1 cut(s)	987
BseDI	CCNNGG	5 cut(s)	109, 549, 748, 1264, 1938
BseGI	GGATG	4 cut(s)	209, 360, 1084, 1597
BseJI	GATNNNNATC	1 cut(s)	658
BseLI	CCNNNNNNNGG	2 cut(s)	230, 382
BseMI	GCAATG	5 cut(s)	387, 493, 1965, 1995, 2005
BseMII	CTCAG	2 cut(s)	489, 1537
BseNI	ACTGG	6 cut(s)	342, 487, 727, 843, 1332, 1839
BseRI	GAGGAG	1 cut(s)	38
BseSI	GKGCMC	4 cut(s)	441, 730, 1635, 1894
BseXI	GCAGC	8 cut(s)	126, 379, 527, 627, 877, 1069, 1453, 1745
BseYI	CCCAGC	1 cut(s)	4
BsgI	GTGCAG	4 cut(s)	341, 452, 668, 1752
Bsh1236I	CGCG	2 cut(s)	17, 1383
Bsh1285I	CGRYCG	1 cut(s)	656
BshFI	GGCC	2 cut(s)	947, 1125
BshNI	GGYRCC	1 cut(s)	436
BshVI	ATCGAT	1 cut(s)	987
BsiEI	CGRYCG	1 cut(s)	656
BsiHKAI	GWGCWC	4 cut(s)	476, 730, 859, 1894
BsiSI	CCGG	4 cut(s)	67, 227, 257, 551
BslFI	GGGAC	1 cut(s)	2106
BslI	CCNNNNNNNGG	2 cut(s)	230, 382
BsmAI	GTCTC	3 cut(s)	131, 1001, 1277
BsmBI	CGTCTC	1 cut(s)	131
BsmFI	GGGAC	1 cut(s)	2106
BsmI	GAATGC	1 cut(s)	1844
BsnI	GGCC	2 cut(s)	947, 1125
Bsp119I	TTCGAA	1 cut(s)	146
Bsp1286I	GDGCHC	7 cut(s)	441, 476, 730, 859, 1635, 1800, 1894
Bsp1407I	TGTACA	1 cut(s)	1408
Bsp143I	GATC	3 cut(s)	653, 694, 2042
Bsp1720I	GCTNAGC	1 cut(s)	475
BspANI	GGCC	2 cut(s)	947, 1125
BspCNI	CTCAG	2 cut(s)	488, 1536
BspDI	ATCGAT	1 cut(s)	987
BspFNI	CGCG	2 cut(s)	17, 1383
BspHI	TCATGA	1 cut(s)	1752
BspLI	GGNNCC	4 cut(s)	10, 438, 1495, 2044
BspMI	ACCTGC	1 cut(s)	424
BspPI	GGATC	2 cut(s)	2037, 2050
BspQI	GCTCTTC	1 cut(s)	1538
BspT104I	TTCGAA	1 cut(s)	146
BspT107I	GGYRCC	1 cut(s)	436
BsrDI	GCAATG	5 cut(s)	387, 493, 1965, 1995, 2005
BsrGI	TGTACA	1 cut(s)	1408
BsrI	ACTGG	6 cut(s)	342, 487, 727, 843, 1332, 1839
BssECI	CCNNGG	5 cut(s)	109, 549, 748, 1264, 1938
BssMI	GATC	3 cut(s)	653, 694, 2042
BssNAI	GTATAC	1 cut(s)	836
BssSI	CACGAG	1 cut(s)	1839
BssT1I	CCWWGG	2 cut(s)	1264, 1938
Bst1107I	GTATAC	1 cut(s)	836
Bst2BI	CACGAG	1 cut(s)	1839
Bst4CI	ACNGT	7 cut(s)	749, 924, 1012, 1204, 1406, 1645, 1780
Bst6I	CTCTTC	2 cut(s)	1538, 1701
BstAPI	GCANNNNNTGC	1 cut(s)	863
BstAUI	TGTACA	1 cut(s)	1408
BstBAI	YACGTR	1 cut(s)	584
BstBI	TTCGAA	1 cut(s)	146
BstC8I	GCNNGC	2 cut(s)	41, 456
BstDEI	CTNAG	7 cut(s)	475, 630, 710, 811, 933, 1523, 2064
BstDSI	CCRYGG	2 cut(s)	109, 748
BstF5I	GGATG	4 cut(s)	209, 360, 1084, 1597
BstFNI	CGCG	2 cut(s)	17, 1383
BstH2I	RGCGCY	2 cut(s)	539, 641
BstHHI	GCGC	2 cut(s)	538, 640
BstKTI	GATC	3 cut(s)	656, 697, 2045
BstMAI	GTCTC	3 cut(s)	131, 1001, 1277
BstMBI	GATC	3 cut(s)	653, 694, 2042
BstMCI	CGRYCG	1 cut(s)	656
BstSCI	CCNGG	1 cut(s)	549
BstSLI	GKGCMC	4 cut(s)	441, 730, 1635, 1894
BstUI	CGCG	2 cut(s)	17, 1383
BstV1I	GCAGC	8 cut(s)	126, 379, 527, 627, 877, 1069, 1453, 1745
BstV2I	GAAGAC	1 cut(s)	664
BstX2I	RGATCY	1 cut(s)	2042
BstXI	CCANNNNNNTGG	1 cut(s)	499
BstYI	RGATCY	1 cut(s)	2042
BstZ17I	GTATAC	1 cut(s)	836
Bsu15I	ATCGAT	1 cut(s)	987
BsuRI	GGCC	2 cut(s)	947, 1125
BsuTUI	ATCGAT	1 cut(s)	987
BtgI	CCRYGG	2 cut(s)	109, 748
BtrI	CACGTC	1 cut(s)	1730
BtsCI	GGATG	4 cut(s)	209, 360, 1084, 1597
BtsI	GCAGTG	3 cut(s)	492, 1983, 2000
BtsIMutI	CAGTG	7 cut(s)	492, 929, 1411, 1650, 1832, 1983, 2000
BveI	ACCTGC	1 cut(s)	424
Cac8I	GCNNGC	2 cut(s)	41, 456
CaiI	CAGNNNCTG	4 cut(s)	482, 890, 1297, 1327
CciI	TCATGA	1 cut(s)	1752
CfoI	GCGC	2 cut(s)	538, 640
Cfr13I	GGNCC	1 cut(s)	421
ClaI	ATCGAT	1 cut(s)	987
CseI	GACGC	1 cut(s)	6
Csp6I	GTAC	5 cut(s)	28, 585, 800, 975, 1409
CspCI	CAANNNNNGTGG	2 cut(s)	1789, 1824
CviAII	CATG	6 cut(s)	867, 949, 1306, 1742, 1753, 2048
CviQI	GTAC	5 cut(s)	28, 585, 800, 975, 1409
DdeI	CTNAG	7 cut(s)	475, 630, 710, 811, 933, 1523, 2064
DpnI	GATC	3 cut(s)	655, 696, 2044
DpnII	GATC	3 cut(s)	653, 694, 2042
DraI	TTTAAA	2 cut(s)	1065, 1089
DraIII	CACNNNGTG	1 cut(s)	924
DriI	GACNNNNNGTC	1 cut(s)	235
EaeI	YGGCCR	1 cut(s)	1123
Eam1104I	CTCTTC	2 cut(s)	1538, 1701
Eam1105I	GACNNNNNGTC	1 cut(s)	235
EarI	CTCTTC	2 cut(s)	1538, 1701
EciI	GGCGGA	2 cut(s)	202, 213
Ecl136II	GAGCTC	1 cut(s)	474
Eco130I	CCWWGG	2 cut(s)	1264, 1938
Eco24I	GRGCYC	2 cut(s)	476, 1800
Eco32I	GATATC	3 cut(s)	704, 819, 1452
Eco47I	GGWCC	1 cut(s)	421
Eco47III	AGCGCT	1 cut(s)	639
Eco53kI	GAGCTC	1 cut(s)	474
Eco57I	CTGAAG	2 cut(s)	1399, 1519
EcoICRI	GAGCTC	1 cut(s)	474
EcoO109I	RGGNCCY	1 cut(s)	421
EcoRI	GAATTC	1 cut(s)	295
EcoRV	GATATC	3 cut(s)	704, 819, 1452
EcoT14I	CCWWGG	2 cut(s)	1264, 1938
EcoT38I	GRGCYC	2 cut(s)	476, 1800
ErhI	CCWWGG	2 cut(s)	1264, 1938
Esp3I	CGTCTC	1 cut(s)	131
FaeI	CATG	6 cut(s)	870, 952, 1309, 1745, 1756, 2051
FaqI	GGGAC	1 cut(s)	2106
FatI	CATG	6 cut(s)	866, 948, 1305, 1741, 1752, 2047
FauI	CCCGC	2 cut(s)	32, 1376
FblI	GTMKAC	2 cut(s)	835, 1609
FokI	GGATG	4 cut(s)	196, 367, 1091, 1604
FriOI	GRGCYC	2 cut(s)	476, 1800
FspBI	CTAG	4 cut(s)	279, 663, 972, 1895
GlaI	GCGC	2 cut(s)	537, 639
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	3 cut(s)	1349, 1394, 2036
HaeII	RGCGCY	2 cut(s)	539, 641
HaeIII	GGCC	2 cut(s)	947, 1125
HapII	CCGG	4 cut(s)	67, 227, 257, 551
HgaI	GACGC	1 cut(s)	6
HhaI	GCGC	2 cut(s)	538, 640
Hin1II	CATG	6 cut(s)	870, 952, 1309, 1745, 1756, 2051
Hin6I	GCGC	2 cut(s)	536, 638
HinP1I	GCGC	2 cut(s)	536, 638
HincII	GTYRAC	1 cut(s)	1303
HindII	GTYRAC	1 cut(s)	1303
HindIII	AAGCTT	1 cut(s)	452
HinfI	GANTC	6 cut(s)	274, 989, 1031, 1294, 1438, 1606
HpaII	CCGG	4 cut(s)	67, 227, 257, 551
HphI	GGTGA	5 cut(s)	502, 1220, 1234, 1361, 1826
Hpy166II	GTNNAC	8 cut(s)	728, 836, 1303, 1409, 1411, 1515, 1610, 1892
Hpy188I	TCNGA	4 cut(s)	332, 653, 1116, 1526
Hpy188III	TCNNGA	9 cut(s)	716, 1280, 1373, 1557, 1580, 1589, 1753, 1849, 2015
Hpy8I	GTNNAC	8 cut(s)	728, 836, 1303, 1409, 1411, 1515, 1610, 1892
Hpy99I	CGWCG	3 cut(s)	22, 305, 1731
HpyAV	CCTTC	8 cut(s)	97, 115, 187, 228, 412, 451, 661, 937
HpyCH4III	ACNGT	7 cut(s)	749, 924, 1012, 1204, 1406, 1645, 1780
HpyCH4IV	ACGT	4 cut(s)	318, 583, 795, 1729
HpyF3I	CTNAG	7 cut(s)	475, 630, 710, 811, 933, 1523, 2064
HpySE526I	ACGT	4 cut(s)	318, 583, 795, 1729
Hsp92II	CATG	6 cut(s)	870, 952, 1309, 1745, 1756, 2051
HspAI	GCGC	2 cut(s)	536, 638
Kzo9I	GATC	3 cut(s)	653, 694, 2042
LguI	GCTCTTC	1 cut(s)	1538
LmnI	GCTCC	3 cut(s)	69, 413, 854
Lsp1109I	GCAGC	8 cut(s)	126, 379, 527, 627, 877, 1069, 1453, 1745
LweI	GCATC	9 cut(s)	173, 192, 193, 387, 958, 1069, 1351, 1708, 2104
MaeI	CTAG	4 cut(s)	279, 663, 972, 1895
MaeII	ACGT	4 cut(s)	318, 583, 795, 1729
MaeIII	GTNAC	7 cut(s)	344, 916, 1323, 1349, 1377, 1418, 1594
MalI	GATC	3 cut(s)	655, 696, 2044
MboI	GATC	3 cut(s)	653, 694, 2042
MboII	GAAGA	5 cut(s)	664, 689, 1447, 1525, 1718
MfeI	CAATTG	2 cut(s)	530, 2109
MflI	RGATCY	1 cut(s)	2042
MhlI	GDGCHC	7 cut(s)	441, 476, 730, 859, 1635, 1800, 1894
MlyI	GAGTC	3 cut(s)	268, 1303, 1615
MmeI	TCCRAC	2 cut(s)	391, 1471
MroXI	GAANNNNTTC	2 cut(s)	671, 1019
MseI	TTAA	5 cut(s)	1064, 1088, 1805, 1922, 2125
MslI	CAYNNNNRTG	2 cut(s)	1751, 1988
MspA1I	CMGCKG	1 cut(s)	1500
MspI	CCGG	4 cut(s)	67, 227, 257, 551
MspR9I	CCNGG	1 cut(s)	551
MunI	CAATTG	2 cut(s)	530, 2109
Mva1269I	GAATGC	1 cut(s)	1844
MvnI	CGCG	2 cut(s)	17, 1383
NciI	CCSGG	1 cut(s)	551
NdeII	GATC	3 cut(s)	653, 694, 2042
NlaIII	CATG	6 cut(s)	870, 952, 1309, 1745, 1756, 2051
NlaIV	GGNNCC	4 cut(s)	10, 438, 1495, 2044
NmeAIII	GCCGAG	1 cut(s)	782
NmuCI	GTSAC	3 cut(s)	916, 1349, 1594
NspV	TTCGAA	1 cut(s)	146
PagI	TCATGA	1 cut(s)	1752
PaqCI	CACCTGC	1 cut(s)	424
PciSI	GCTCTTC	1 cut(s)	1538
PctI	GAATGC	1 cut(s)	1844
PdmI	GAANNNNTTC	2 cut(s)	671, 1019
PfeI	GAWTC	3 cut(s)	989, 1031, 1438
Ple19I	CGATCG	1 cut(s)	656
PleI	GAGTC	3 cut(s)	268, 1302, 1614
PpsI	GAGTC	3 cut(s)	268, 1302, 1614
Ppu21I	YACGTR	1 cut(s)	584
PpuMI	RGGWCCY	1 cut(s)	421
PsiI	TTATAA	1 cut(s)	998
Psp124BI	GAGCTC	1 cut(s)	476
Psp1406I	AACGTT	1 cut(s)	795
Psp5II	RGGWCCY	1 cut(s)	421
PspFI	CCCAGC	1 cut(s)	4
PspN4I	GGNNCC	4 cut(s)	10, 438, 1495, 2044
PspPI	GGNCC	1 cut(s)	421
PspPPI	RGGWCCY	1 cut(s)	421
PstNI	CAGNNNCTG	4 cut(s)	482, 890, 1297, 1327
PsuI	RGATCY	1 cut(s)	2042
PvuI	CGATCG	1 cut(s)	656
RsaI	GTAC	5 cut(s)	29, 586, 801, 976, 1410
RsaNI	GTAC	5 cut(s)	28, 585, 800, 975, 1409
RseI	CAYNNNNRTG	2 cut(s)	1751, 1988
SacI	GAGCTC	1 cut(s)	476
SapI	GCTCTTC	1 cut(s)	1538
SaqAI	TTAA	5 cut(s)	1064, 1088, 1805, 1922, 2125
Sau3AI	GATC	3 cut(s)	653, 694, 2042
Sau96I	GGNCC	1 cut(s)	421
SchI	GAGTC	3 cut(s)	268, 1303, 1615
ScrFI	CCNGG	1 cut(s)	551
SduI	GDGCHC	7 cut(s)	441, 476, 730, 859, 1635, 1800, 1894
SfaNI	GCATC	9 cut(s)	173, 192, 193, 387, 958, 1069, 1351, 1708, 2104
SfuI	TTCGAA	1 cut(s)	146
SinI	GGWCC	1 cut(s)	421
SmiMI	CAYNNNNRTG	2 cut(s)	1751, 1988
SmlI	CTYRAG	2 cut(s)	1601, 1799
SmoI	CTYRAG	2 cut(s)	1601, 1799
SspI	AATATT	3 cut(s)	1019, 1132, 1920
SspMI	CTAG	4 cut(s)	279, 663, 972, 1895
SstI	GAGCTC	1 cut(s)	476
StyD4I	CCNGG	1 cut(s)	549
StyI	CCWWGG	2 cut(s)	1264, 1938
TaaI	ACNGT	7 cut(s)	749, 924, 1012, 1204, 1406, 1645, 1780
TaiI	ACGT	4 cut(s)	321, 586, 798, 1732
TaqI	TCGA	8 cut(s)	20, 146, 303, 524, 700, 715, 987, 1951
TatI	WGTACW	2 cut(s)	974, 1408
TauI	GCSGC	2 cut(s)	95, 1724
TfiI	GAWTC	3 cut(s)	989, 1031, 1438
Tru1I	TTAA	5 cut(s)	1064, 1088, 1805, 1922, 2125
Tru9I	TTAA	5 cut(s)	1064, 1088, 1805, 1922, 2125
TscAI	CASTG	7 cut(s)	499, 929, 1411, 1650, 1839, 1990, 2000
TseFI	GTSAC	3 cut(s)	916, 1349, 1594
TseI	GCWGC	8 cut(s)	114, 392, 515, 640, 890, 1082, 1466, 1733
Tsp45I	GTSAC	3 cut(s)	916, 1349, 1594
TspDTI	ATGAA	7 cut(s)	371, 965, 1322, 1667, 1769, 1893, 1954
TspGWI	ACGGA	3 cut(s)	289, 547, 1627
TspRI	CASTG	7 cut(s)	499, 929, 1411, 1650, 1839, 1990, 2000
VneI	GTGCAC	2 cut(s)	726, 1890
VpaK11BI	GGWCC	1 cut(s)	421
XapI	RAATTY	3 cut(s)	295, 766, 848
XmiI	GTMKAC	2 cut(s)	835, 1609
XmnI	GAANNNNTTC	2 cut(s)	671, 1019
XspI	CTAG	4 cut(s)	279, 663, 972, 1895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.