Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000470.1

Orthogroup ID

OG0005696

Physical Location & Seq

Genomic Coordinates Reverse (-)

70624 .. 77953

Gene Structure 7330 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000470.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

atgctcggtgctacagcgtcgaggttctacagagtcaccggccttctcttccgttcccaccaaccccttcaaagccgcacccttttctctctctccctccccaattcctccgtttccaaaacctccttccatggaaaccctattcttcttcttccccaaacaacatccagaagaagaatcattcctctccaaatcaacgccttcgtctccggcacctcctcctcctcctccgcccctcccaacggccgggcctggctatccacttccgcgccggaccagaccaatccacggcctttcgtccctaaaaagactcccgacgaacaagtcgacgacgtccagatcttccggacgctcgccaggtacttgtggatgaaggacaactatgaattccggcttagggttcttactgccgtggggtttttggttggggcgaaggtgctcaatgttcaggtgccgtttctgttcaagctcgccgtggattggttgaccacggccaccggaaatgcgggtagttttgcggcgttctctgccgccaatccgactcagttggctcttttcgcaacgcctgcgtcggttttgattgggtatggcattgcacgctctggcgcttctgctttcaacgaattgaggactgctgtgttttctaaggtagcattgcgaacaatccgatcagtatccaggaaggtcttctcacatttgcatgaccttgatcttcgatatcatcttagtcgagaaaccggtgcactaaatagaatcattgatcgtggtagccgtgctataaatttcattctctcgtctatggtattcaatgttgtacccaccattttagagatatctatggtttcaggtatactggcttacaaatttggagcaccttttgcatggataacatcgctatcagttgctgcatatattgcatttacattgactgttacacagtggaggacgaagttcaggaaggccatgaataaggccgataatgatgctagtacgagggcaattgattcacttattaattatgagactgtcaaatatttcaacaatgaaggttttgaagctgataaatatgacaaatacttaaagaggtatgaggatgctgccttaaaaacacaacgtagtcttgcttttctgaacttcggccaaagtatcatattcagcacagctttatcaacggctatggtgttgtgttcaaatggtattatgaatggcagcatgacagttggtgatttggtcatggtgaatggacttctattccagctatcacttccactcaatttccttggtagtgtttatcgtgagaccatacagagccttgttgacatgaaatccatgtttcagttactggaggaaagggctgaaattagagacaaagatgacgcaaagcctctgcacctaagcggggggagcattcagtttgacaacgtgcatttcagttacctaacggaaagaaagattcttgatgggatatcatttcttgtacctgctggaaagagtgtggctattgttggaaccagcggtagtggaaagtcaaccattctcagattgctgttcaggttttttgacagccattccggaagtataaggatagacggtcaagatattcgagatgtgacacttgagagtttgcggaactgtattggagttgtgccgcaagatacagtacttttcaatgatacaatttaccacaacattcattatggccgtctttcagcaacaaaagaagaggtgtatgaagctgctcgacgtgcagcaatacatgatactatcatgaactttcccgacagatattctactgaagtgggggaacgggggctcaagttaagtggtggggagaagcagcgtgtggcactggctcgtgcattcttgaaagcacctccaattctgttatgtgatgaagctacaagtgcactagatagcaccacagaagcggaaatattaagtgcattgaagtccttggcaaccaaccgaacttcagttttcatagctcataggctgactactgcaatgcagtgcgatgagataatagttctggagaatgggcaagtggttgagcagggaccccatgatgttctcttgtctaaggcaggaagatatgcacagctctggggacagcaaaataacacagttgatgcacttgatgccaccatcaaaacagggacataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006777 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006875 GO:0006879 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009657 GO:0009658 GO:0009889 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010288 GO:0010380 GO:0016020 GO:0016043 GO:0018130 GO:0019222 GO:0019538 GO:0019637 GO:0019720 GO:0019725 GO:0019866 GO:0022622 GO:0030003 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046916 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051186 GO:0051188 GO:0051189 GO:0051193 GO:0051276 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071840 GO:0090056 GO:0090407 GO:0098771 GO:0099402 GO:1901360 GO:1901362 GO:1901401 GO:1901463 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

720

Amino Acids

79.48

Weight (kDa)

9.41

Isoelectric Point (pI)

29.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28620 AT4G28630 AT5G58270
fragaria_vesca	FvH4_3g41120 FvH4_3g41120 FvH4_3g41120 FvH4_3g41120
malus_domestica	MD03G1047300.v1.1 MD11G1049800.v1.1
prunus_persica	Prupe.6G038500_v2.0.a1
pyrus_communis	pycom03g03730 pycom11g04040
rosa_chinensis	RchiOBHm_Chr5g0073901 RchiOBHm_Chr5g0073961
rosa_laevigata	RLG00000036423
rosa_multiflora	Rmu_sc0000470.1_g000016 Rmu_sc0000470.1_g000034
rosa_roxburghii	Rroxscaffold_1G00007470
rosa_rugosa	Rorug05G0427200
rosa_samantha	Rh5AG484200 Rh5AG484700 Rh5BG504900 Rh5BG505300 Rh5CG528700 Rh5CG529100 Rh5DG517200
rosa_wichuraiana	Rw0G006220 Rw5G045010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	323
AatII	GACGTC	1 cut(s)	336
Acc36I	ACCTGC	1 cut(s)	1489
AccB1I	GGYRCC	2 cut(s)	212, 451
AccI	GTMKAC	2 cut(s)	327, 850
AccII	CGCG	1 cut(s)	269
AccIII	TCCGGA	2 cut(s)	345, 1571
AcoI	YGGCCR	4 cut(s)	244, 492, 1138, 1699
AcsI	RAATTY	3 cut(s)	386, 781, 863
AcuI	CTGAAG	2 cut(s)	1815, 1956
AcyI	GRCGYC	1 cut(s)	333
AfaI	GTAC	5 cut(s)	362, 816, 991, 1479, 1662
AfiI	CCNNNNNNNGG	6 cut(s)	242, 246, 288, 397, 480, 1399
AgeI	ACCGGT	1 cut(s)	737
AjiI	CACGTC	1 cut(s)	1745
AjnI	CCWGG	3 cut(s)	251, 356, 677
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AluBI	AGCT	8 cut(s)	469, 1058, 1163, 1258, 1736, 1898, 1985, 2101
AluI	AGCT	8 cut(s)	469, 1058, 1163, 1258, 1736, 1898, 1985, 2101
Alw21I	GWGCWC	4 cut(s)	441, 745, 874, 1909
Alw26I	GTCTC	4 cut(s)	211, 1016, 1292, 1359
Alw44I	GTGCAC	2 cut(s)	741, 1905
AlwNI	CAGNNNCTG	2 cut(s)	905, 1342
Aor13HI	TCCGGA	2 cut(s)	345, 1571
AoxI	GGCC	9 cut(s)	40, 244, 249, 290, 492, 960, 972, 1138, 1699
ApaLI	GTGCAC	2 cut(s)	741, 1905
ApeKI	GCWGC	6 cut(s)	905, 1097, 1209, 1736, 1748, 1837
ApoI	RAATTY	3 cut(s)	386, 781, 863
AseI	ATTAAT	1 cut(s)	1014
AsiGI	ACCGGT	1 cut(s)	737
Asp700I	GAANNNNTTC	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	271, 608
AspS9I	GGNCC	3 cut(s)	249, 274, 2057
AsuC2I	CCSGG	1 cut(s)	248
AsuHPI	GGTGA	3 cut(s)	28, 1235, 1249
AvaII	GGWCC	2 cut(s)	274, 2057
BaeGI	GKGCMC	2 cut(s)	745, 1909
BanI	GGYRCC	2 cut(s)	212, 451
BanII	GRGCYC	1 cut(s)	1815
BauI	CACGAG	1 cut(s)	1854
BbsI	GAAGAC	1 cut(s)	679
Bbv12I	GWGCWC	4 cut(s)	441, 745, 874, 1909
BbvI	GCAGC	6 cut(s)	892, 1084, 1221, 1723, 1760, 1849
BccI	CCATC	2 cut(s)	1454, 2153
BceAI	ACGGC	9 cut(s)	259, 305, 395, 439, 458, 507, 756, 1188, 1686
BcgI	CGANNNNNNTGC	2 cut(s)	965, 999
BciT130I	CCWGG	3 cut(s)	253, 358, 679
BciVI	GTATCC	1 cut(s)	685
BcnI	CCSGG	1 cut(s)	248
BcoDI	GTCTC	4 cut(s)	211, 1016, 1292, 1359
BfaI	CTAG	2 cut(s)	987, 1910
BfmI	CTRYAG	2 cut(s)	12, 28
BfoI	RGCGCY	1 cut(s)	609
BfuAI	ACCTGC	1 cut(s)	1489
BfuI	GTATCC	1 cut(s)	685
BglII	AGATCT	1 cut(s)	339
BmcAI	AGTACT	1 cut(s)	1662
Bme1390I	CCNGG	4 cut(s)	248, 253, 358, 679
Bme18I	GGWCC	2 cut(s)	274, 2057
BmgBI	CACGTC	1 cut(s)	1745
BmgT120I	GGNCC	3 cut(s)	249, 274, 2057
BmiI	GGNNCC	5 cut(s)	214, 453, 1510, 2058, 2059
BmrFI	CCNGG	4 cut(s)	248, 253, 358, 679
BmsI	GCATC	4 cut(s)	973, 1084, 2119, 2128
BpiI	GAAGAC	1 cut(s)	679
BpmI	CTGGAG	2 cut(s)	1364, 2051
Bpu10I	CCTNAGC	2 cut(s)	395, 1394
BpuEI	CTTGAG	2 cut(s)	1637, 1799
BpuMI	CCSGG	1 cut(s)	248
BsaBI	GATNNNNATC	1 cut(s)	673
BsaHI	GRCGYC	1 cut(s)	333
BsaI	GGTCTC	1 cut(s)	1292
BsaJI	CCNNGG	7 cut(s)	130, 287, 411, 474, 489, 1279, 1953
BsaWI	WCCGGW	4 cut(s)	345, 497, 737, 1571
Bsc4I	CCNNNNNNNGG	6 cut(s)	242, 246, 288, 397, 480, 1399
Bse118I	RCCGGY	2 cut(s)	38, 737
Bse1I	ACTGG	3 cut(s)	858, 1347, 1854
Bse3DI	GCAATG	3 cut(s)	591, 653, 2010
Bse8I	GATNNNNATC	1 cut(s)	673
BseAI	TCCGGA	2 cut(s)	345, 1571
BseBI	CCWGG	3 cut(s)	253, 358, 679
BseDI	CCNNGG	7 cut(s)	130, 287, 411, 474, 489, 1279, 1953
BseGI	GGATG	3 cut(s)	164, 375, 1099
BseJI	GATNNNNATC	1 cut(s)	673
BseLI	CCNNNNNNNGG	6 cut(s)	242, 246, 288, 397, 480, 1399
BseMI	GCAATG	3 cut(s)	591, 653, 2010
BseMII	CTCAG	2 cut(s)	557, 1552
BseNI	ACTGG	3 cut(s)	858, 1347, 1854
BseRI	GAGGAG	4 cut(s)	208, 211, 214, 217
BseSI	GKGCMC	2 cut(s)	745, 1909
BseX3I	CGGCCG	1 cut(s)	244
BseXI	GCAGC	6 cut(s)	892, 1084, 1221, 1723, 1760, 1849
BsgI	GTGCAG	2 cut(s)	1373, 1767
Bsh1236I	CGCG	1 cut(s)	269
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
BshNI	GGYRCC	2 cut(s)	212, 451
BshTI	ACCGGT	1 cut(s)	737
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	4 cut(s)	441, 745, 874, 1909
BsiSI	CCGG	9 cut(s)	39, 210, 247, 272, 346, 391, 498, 738, 1572
BslFI	GGGAC	3 cut(s)	284, 2070, 2121
BslI	CCNNNNNNNGG	6 cut(s)	242, 246, 288, 397, 480, 1399
BsmAI	GTCTC	4 cut(s)	211, 1016, 1292, 1359
BsmBI	CGTCTC	1 cut(s)	211
BsmFI	GGGAC	3 cut(s)	284, 2070, 2121
BsmI	GAATGC	2 cut(s)	1407, 1859
BsnI	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
Bso31I	GGTCTC	1 cut(s)	1292
Bsp1286I	GDGCHC	5 cut(s)	441, 745, 874, 1815, 1909
Bsp13I	TCCGGA	2 cut(s)	345, 1571
Bsp143I	GATC	4 cut(s)	339, 668, 709, 760
Bsp19I	CCATGG	1 cut(s)	130
BspANI	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
BspCNI	CTCAG	2 cut(s)	556, 1551
BspEI	TCCGGA	2 cut(s)	345, 1571
BspFNI	CGCG	1 cut(s)	269
BspHI	TCATGA	1 cut(s)	1767
BspLI	GGNNCC	5 cut(s)	214, 453, 1510, 2058, 2059
BspMI	ACCTGC	1 cut(s)	1489
BspT107I	GGYRCC	2 cut(s)	212, 451
BspTNI	GGTCTC	1 cut(s)	1292
BsrDI	GCAATG	3 cut(s)	591, 653, 2010
BsrFI	RCCGGY	2 cut(s)	38, 737
BsrI	ACTGG	3 cut(s)	858, 1347, 1854
BssAI	RCCGGY	2 cut(s)	38, 737
BssECI	CCNNGG	7 cut(s)	130, 287, 411, 474, 489, 1279, 1953
BssMI	GATC	4 cut(s)	339, 668, 709, 760
BssNAI	GTATAC	1 cut(s)	851
BssNI	GRCGYC	1 cut(s)	333
BssSI	CACGAG	1 cut(s)	1854
BssT1I	CCWWGG	3 cut(s)	130, 1279, 1953
Bst1107I	GTATAC	1 cut(s)	851
Bst2BI	CACGAG	1 cut(s)	1854
Bst2UI	CCWGG	3 cut(s)	253, 358, 679
Bst4CI	ACNGT	8 cut(s)	931, 939, 1027, 1219, 1592, 1634, 1660, 2125
Bst6I	CTCTTC	2 cut(s)	53, 1716
BstACI	GRCGYC	1 cut(s)	333
BstAPI	GCANNNNNTGC	4 cut(s)	566, 878, 914, 2138
BstC8I	GCNNGC	4 cut(s)	354, 471, 567, 598
BstDEI	CTNAG	7 cut(s)	395, 543, 645, 725, 1394, 1538, 2079
BstDSI	CCRYGG	5 cut(s)	130, 287, 411, 474, 489
BstF5I	GGATG	3 cut(s)	164, 375, 1099
BstFNI	CGCG	1 cut(s)	269
BstH2I	RGCGCY	1 cut(s)	609
BstHHI	GCGC	2 cut(s)	271, 608
BstKTI	GATC	4 cut(s)	342, 671, 712, 763
BstMAI	GTCTC	4 cut(s)	211, 1016, 1292, 1359
BstMBI	GATC	4 cut(s)	339, 668, 709, 760
BstMCI	CGRYCG	1 cut(s)	247
BstNI	CCWGG	3 cut(s)	253, 358, 679
BstSCI	CCNGG	4 cut(s)	246, 251, 356, 677
BstSFI	CTRYAG	2 cut(s)	12, 28
BstSLI	GKGCMC	2 cut(s)	745, 1909
BstUI	CGCG	1 cut(s)	269
BstV1I	GCAGC	6 cut(s)	892, 1084, 1221, 1723, 1760, 1849
BstV2I	GAAGAC	1 cut(s)	679
BstX2I	RGATCY	1 cut(s)	339
BstYI	RGATCY	1 cut(s)	339
BstZ17I	GTATAC	1 cut(s)	851
BstZI	CGGCCG	1 cut(s)	244
BsuI	GTATCC	1 cut(s)	685
BsuRI	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
BtgI	CCRYGG	5 cut(s)	130, 287, 411, 474, 489
BtgZI	GCGATG	2 cut(s)	876, 2028
BtrI	CACGTC	1 cut(s)	1745
BtsCI	GGATG	3 cut(s)	164, 375, 1099
BtsI	GCAGTG	1 cut(s)	2015
BtsIMutI	CAGTG	3 cut(s)	944, 1847, 2015
BveI	ACCTGC	1 cut(s)	1489
Cac8I	GCNNGC	4 cut(s)	354, 471, 567, 598
CaiI	CAGNNNCTG	2 cut(s)	905, 1342
CciI	TCATGA	1 cut(s)	1767
CfoI	GCGC	2 cut(s)	271, 608
Cfr10I	RCCGGY	2 cut(s)	38, 737
Cfr13I	GGNCC	3 cut(s)	249, 274, 2057
CseI	GACGC	4 cut(s)	6, 358, 558, 1385
Csp6I	GTAC	5 cut(s)	361, 815, 990, 1478, 1661
CspAI	ACCGGT	1 cut(s)	737
CspCI	CAANNNNNGTGG	2 cut(s)	1804, 1839
CviQI	GTAC	5 cut(s)	361, 815, 990, 1478, 1661
DdeI	CTNAG	7 cut(s)	395, 543, 645, 725, 1394, 1538, 2079
DpnI	GATC	4 cut(s)	341, 670, 711, 762
DpnII	GATC	4 cut(s)	339, 668, 709, 760
DrdI	GACNNNNNNGTC	1 cut(s)	323
DseDI	GACNNNNNNGTC	1 cut(s)	323
EaeI	YGGCCR	4 cut(s)	244, 492, 1138, 1699
EagI	CGGCCG	1 cut(s)	244
Eam1104I	CTCTTC	2 cut(s)	53, 1716
EarI	CTCTTC	2 cut(s)	53, 1716
EciI	GGCGGA	1 cut(s)	220
EclXI	CGGCCG	1 cut(s)	244
Eco130I	CCWWGG	3 cut(s)	130, 1279, 1953
Eco24I	GRGCYC	1 cut(s)	1815
Eco31I	GGTCTC	1 cut(s)	1292
Eco32I	GATATC	3 cut(s)	719, 834, 1467
Eco47I	GGWCC	2 cut(s)	274, 2057
Eco52I	CGGCCG	1 cut(s)	244
Eco57I	CTGAAG	2 cut(s)	1815, 1956
EcoO109I	RGGNCCY	1 cut(s)	2057
EcoRI	GAATTC	1 cut(s)	386
EcoRII	CCWGG	3 cut(s)	251, 356, 677
EcoRV	GATATC	3 cut(s)	719, 834, 1467
EcoT14I	CCWWGG	3 cut(s)	130, 1279, 1953
EcoT38I	GRGCYC	1 cut(s)	1815
ErhI	CCWWGG	3 cut(s)	130, 1279, 1953
Esp3I	CGTCTC	1 cut(s)	211
FaqI	GGGAC	3 cut(s)	284, 2070, 2121
FauI	CCCGC	2 cut(s)	499, 1391
FblI	GTMKAC	2 cut(s)	327, 850
FokI	GGATG	3 cut(s)	151, 382, 1106
FriOI	GRGCYC	1 cut(s)	1815
FspBI	CTAG	2 cut(s)	987, 1910
GlaI	GCGC	2 cut(s)	270, 607
GsuI	CTGGAG	2 cut(s)	1364, 2051
HaeII	RGCGCY	1 cut(s)	609
HaeIII	GGCC	9 cut(s)	42, 246, 251, 292, 494, 962, 974, 1140, 1701
HapII	CCGG	9 cut(s)	39, 210, 247, 272, 346, 391, 498, 738, 1572
HgaI	GACGC	4 cut(s)	6, 358, 558, 1385
HhaI	GCGC	2 cut(s)	271, 608
Hin1I	GRCGYC	1 cut(s)	333
Hin6I	GCGC	2 cut(s)	269, 606
HinP1I	GCGC	2 cut(s)	269, 606
HincII	GTYRAC	4 cut(s)	328, 486, 1318, 1530
HindII	GTYRAC	4 cut(s)	328, 486, 1318, 1530
HinfI	GANTC	7 cut(s)	33, 177, 310, 541, 753, 1004, 1453
HpaII	CCGG	9 cut(s)	39, 210, 247, 272, 346, 391, 498, 738, 1572
HphI	GGTGA	3 cut(s)	28, 1235, 1249
Hpy166II	GTNNAC	7 cut(s)	328, 486, 743, 851, 1318, 1530, 1907
Hpy188I	TCNGA	4 cut(s)	540, 668, 1131, 1541
Hpy8I	GTNNAC	7 cut(s)	328, 486, 743, 851, 1318, 1530, 1907
Hpy99I	CGWCG	6 cut(s)	22, 320, 332, 335, 574, 1746
HpyAV	CCTTC	9 cut(s)	53, 77, 136, 211, 367, 427, 676, 952, 1040
HpyCH4III	ACNGT	8 cut(s)	931, 939, 1027, 1219, 1592, 1634, 1660, 2125
HpyCH4IV	ACGT	4 cut(s)	333, 1114, 1422, 1744
HpyF3I	CTNAG	7 cut(s)	395, 543, 645, 725, 1394, 1538, 2079
HpySE526I	ACGT	4 cut(s)	333, 1114, 1422, 1744
Hsp92I	GRCGYC	1 cut(s)	333
HspAI	GCGC	2 cut(s)	269, 606
KflI	GGGWCCC	1 cut(s)	2057
Kpn2I	TCCGGA	2 cut(s)	345, 1571
Kzo9I	GATC	4 cut(s)	339, 668, 709, 760
LmnI	GCTCC	2 cut(s)	869, 1404
Lsp1109I	GCAGC	6 cut(s)	892, 1084, 1221, 1723, 1760, 1849
LweI	GCATC	4 cut(s)	973, 1084, 2119, 2128
MaeI	CTAG	2 cut(s)	987, 1910
MaeII	ACGT	4 cut(s)	333, 1114, 1422, 1744
MaeIII	GTNAC	5 cut(s)	34, 931, 1338, 1433, 1609
MalI	GATC	4 cut(s)	341, 670, 711, 762
MboI	GATC	4 cut(s)	339, 668, 709, 760
MfeI	CAATTG	1 cut(s)	999
MflI	RGATCY	1 cut(s)	339
MhlI	GDGCHC	5 cut(s)	441, 745, 874, 1815, 1909
MlyI	GAGTC	3 cut(s)	42, 304, 535
MmeI	TCCRAC	2 cut(s)	563, 1486
MroI	TCCGGA	2 cut(s)	345, 1571
MroXI	GAANNNNTTC	1 cut(s)	686
MseI	TTAA	5 cut(s)	1014, 1079, 1103, 1820, 1937
MslI	CAYNNNNRTG	1 cut(s)	699
MspA1I	CMGCKG	1 cut(s)	1515
MspI	CCGG	9 cut(s)	39, 210, 247, 272, 346, 391, 498, 738, 1572
MspR9I	CCNGG	4 cut(s)	248, 253, 358, 679
MunI	CAATTG	1 cut(s)	999
Mva1269I	GAATGC	2 cut(s)	1407, 1859
MvaI	CCWGG	3 cut(s)	253, 358, 679
MvnI	CGCG	1 cut(s)	269
NciI	CCSGG	1 cut(s)	248
NcoI	CCATGG	1 cut(s)	130
NdeII	GATC	4 cut(s)	339, 668, 709, 760
NlaIV	GGNNCC	5 cut(s)	214, 453, 1510, 2058, 2059
NmuCI	GTSAC	2 cut(s)	34, 1609
PagI	TCATGA	1 cut(s)	1767
PcsI	WCGNNNNNNNCGW	2 cut(s)	324, 769
PctI	GAATGC	2 cut(s)	1407, 1859
PdmI	GAANNNNTTC	1 cut(s)	686
PfeI	GAWTC	4 cut(s)	177, 753, 1004, 1453
PflFI	GACNNNGTC	1 cut(s)	332
PfoI	TCCNGGA	1 cut(s)	677
PinAI	ACCGGT	1 cut(s)	737
PleI	GAGTC	3 cut(s)	41, 304, 535
PpsI	GAGTC	3 cut(s)	41, 304, 535
PpuMI	RGGWCCY	1 cut(s)	2057
PshBI	ATTAAT	1 cut(s)	1014
Psp5II	RGGWCCY	1 cut(s)	2057
Psp6I	CCWGG	3 cut(s)	251, 356, 677
PspGI	CCWGG	3 cut(s)	251, 356, 677
PspN4I	GGNNCC	5 cut(s)	214, 453, 1510, 2058, 2059
PspPI	GGNCC	3 cut(s)	249, 274, 2057
PspPPI	RGGWCCY	1 cut(s)	2057
PstNI	CAGNNNCTG	2 cut(s)	905, 1342
PsuI	RGATCY	1 cut(s)	339
PsyI	GACNNNGTC	1 cut(s)	332
RsaI	GTAC	5 cut(s)	362, 816, 991, 1479, 1662
RsaNI	GTAC	5 cut(s)	361, 815, 990, 1478, 1661
RseI	CAYNNNNRTG	1 cut(s)	699
SalI	GTCGAC	1 cut(s)	326
SaqAI	TTAA	5 cut(s)	1014, 1079, 1103, 1820, 1937
Sau3AI	GATC	4 cut(s)	339, 668, 709, 760
Sau96I	GGNCC	3 cut(s)	249, 274, 2057
ScaI	AGTACT	1 cut(s)	1662
SchI	GAGTC	3 cut(s)	42, 304, 535
ScrFI	CCNGG	4 cut(s)	248, 253, 358, 679
SduI	GDGCHC	5 cut(s)	441, 745, 874, 1815, 1909
SfaNI	GCATC	4 cut(s)	973, 1084, 2119, 2128
SfcI	CTRYAG	2 cut(s)	12, 28
SinI	GGWCC	2 cut(s)	274, 2057
SmiMI	CAYNNNNRTG	1 cut(s)	699
SmlI	CTYRAG	2 cut(s)	1616, 1814
SmoI	CTYRAG	2 cut(s)	1616, 1814
SspI	AATATT	2 cut(s)	1034, 1935
SspMI	CTAG	2 cut(s)	987, 1910
StyD4I	CCNGG	4 cut(s)	246, 251, 356, 677
StyI	CCWWGG	3 cut(s)	130, 1279, 1953
TaaI	ACNGT	8 cut(s)	931, 939, 1027, 1219, 1592, 1634, 1660, 2125
TaiI	ACGT	4 cut(s)	336, 1117, 1425, 1747
TaqI	TCGA	6 cut(s)	20, 327, 715, 730, 1603, 1741
TatI	WGTACW	1 cut(s)	1660
TauI	GCSGC	4 cut(s)	78, 521, 533, 1651
TfiI	GAWTC	4 cut(s)	177, 753, 1004, 1453
Tru1I	TTAA	5 cut(s)	1014, 1079, 1103, 1820, 1937
Tru9I	TTAA	5 cut(s)	1014, 1079, 1103, 1820, 1937
TscAI	CASTG	3 cut(s)	944, 1854, 2015
TseFI	GTSAC	2 cut(s)	34, 1609
TseI	GCWGC	6 cut(s)	905, 1097, 1209, 1736, 1748, 1837
Tsp45I	GTSAC	2 cut(s)	34, 1609
TspGWI	ACGGA	3 cut(s)	41, 100, 1457
TspRI	CASTG	3 cut(s)	944, 1854, 2015
Tth111I	GACNNNGTC	1 cut(s)	332
VneI	GTGCAC	2 cut(s)	741, 1905
VpaK11BI	GGWCC	2 cut(s)	274, 2057
VspI	ATTAAT	1 cut(s)	1014
XapI	RAATTY	3 cut(s)	386, 781, 863
XmiI	GTMKAC	2 cut(s)	327, 850
XmnI	GAANNNNTTC	1 cut(s)	686
XspI	CTAG	2 cut(s)	987, 1910
ZraI	GACGTC	1 cut(s)	334
ZrmI	AGTACT	1 cut(s)	1662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.