Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0005696

Physical Location & Seq

Genomic Coordinates Reverse (-)

80426591 .. 80433998

Gene Structure 7408 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036423

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGCTCGGTGCTACAGCATCGAGGTTCTACAGAGTCACCGGCCTTCTCTTACGTTCCCACCAACCCCTTCAAAGCCGCAACCTTGTCTCCCTCTCCCTCCCCAATTCCTCCATTTCCAAAACCTCCTTCCATGGAAACCCTATTCTTCTTCTTCCCCAGACAACATCCAGAAGAAGAATCATTCCTCTCCAAATCAACGCTTTCGTCTTCGGCACCTCCGCCCCCGCCCCTCCTTCTCCGCCCAACGGCCGGGCATGGCTATCCACTTCGGCGCCGGACCAGACCAATCCACGGCCTTTCGTCACTAAAAAGACTCCCGACGAACAAGTCGGCGACGTCCAGATCTTCCGGACGCTCGCCAGGTACTTGTGGATGAAAGACAACTATGAATTCCGGCTTAGGGTTCTTACTGCCTTGGGGTTTTTGGTTGGGGCTAAGGTGCTCAATGTTCAGGTTCCGTTTCTGTTCAAGCTCGCCGTGGATTGGTTGACCACGGCCACCGGAAATGCTGGTAGTTTTGCGGCGTTCTCTGCCGCCAATCCGACTCAGTTGGCTCTTTTCGCAACGCCCGCGTCGGTTTTGATTGGGTATGGGATTGCACGCTCTGGCGCTTCTGCTTTCAACGAATTGAGGACTGCTGTGTTTTCTAAGGTAGCATTGCGAACAATCCGATCAGTATCCAGGAAGGTCTTCTCACATTTGCATGACCTTGATCTTCGATATCATCTTAGTCGAGAAACCGGTGCGCTAAATAGAATAATTGATCGTGGTAGCCGTGCTATAAATTTCATTCTCTCATCTATGGTATTCAATGTTGTACCCACCATTTTAGAGATATCTATGGTTTCAGGTATACTGGCTTACAAATTTGGAGCGCCTTTTGCATGGATAACATCGCTATCAGTTGCTGCATATATTGCATTTACATTGACTGTTACACAGTGGAGGACGAAGTTCAGGAAGGCCATGAATAAGGCCGATAATGATGCTAGTACGAGGGCAATTGATTCACTTATTAATTATGAGACTGTCAAATATTTCAACAATGAAGGTTTTGAAGCTGATAAATATGACAAATACTTAAAGAGGTATGAAGATGCTGCCTTAAAAACACAACGTAGTCTTGCTTTTCTGAACTTCGGCCAAAGTATCATATTCAGCACAGCTTTATCAACGGCTATGGTGTTGTGTTCAAATGGTATTCTGAATGGCAGTATGACAGTTGGTGATTTGGTCATGGTGAATGGACTTCTATTCCAGCTATCACTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACCATACAGAGCCTTGTTGACATGAAATCCATGTTTCAGCTACTGGAGGAAAGGGCTGAAATTAGAGACAAAGATGACGCAAAGCCTCTGCACCTAAGCGGGGGGAGCATTCAGTTTGACAACGTGCATTTCAGTTACCTAACGGAAAGAAAGATTCTTGATGGGATATCATTTCTTGTACCTGCTGGAAAGAGTGTGGCTATTGTTGGAACCAGCGGTAGTGGAAAGTCAACCATTCTCAGATTGCTGTTCAGGTTTTTTGACAGCCATTCCGGAAGTATAAGGATAGACGGTCAAGATATTCGAGATGTGACACTTGAGAGTTTGCGGAACTGTATTGGAGTTGTGCCGCAAGATACAGTACTTTTCAATGATACAATATACCACAACATTCATTATGGCCGTCTTTCAGCAACAAAAGAAGAGGTGTATGAAGCTGCTCGACGTGCAGCAATACATGATACCATCATGAACTTTCCCGACAGATATTCTACTGAAGTGGGGGAACGGGGGCTCAAGTTAAGTGGTGGGGAGAAGCAGCGTGTAGCACTGGCTCGTGCTTTCTTGAAAGCACCTCCAATTCTGTTATGTGATGAAGCTACAAGCGCACTAGATAGCACCACAGAAGCGGAAATTTTAAGTGCATTGAAGTCCTTGGCAACCAACCGAACTTCAGTTTTCATTGCTCATAGGCTGACTACTGCAATGCAGTGCGATGAGATAATAGTTCTGGAGAATGGGCAAGTGGTTGAGCAGGGACCCCATGATGTTCTCTTGTCTAAGGCAGGAAGATATGCACAGCTCTGGGGACAGCAAAATAACACAGTTGATGCACTCGATGCCACCATCAAAACAGGGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006777 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006875 GO:0006879 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009507 GO:0009526 GO:0009536 GO:0009555 GO:0009657 GO:0009658 GO:0009889 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0010288 GO:0010380 GO:0016020 GO:0016043 GO:0018130 GO:0019222 GO:0019538 GO:0019637 GO:0019720 GO:0019725 GO:0019866 GO:0022622 GO:0030003 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043545 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046916 GO:0048229 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051186 GO:0051188 GO:0051189 GO:0051193 GO:0051276 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071840 GO:0090056 GO:0090407 GO:0098771 GO:0099402 GO:1901360 GO:1901362 GO:1901401 GO:1901463 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

722

Amino Acids

79.53

Weight (kDa)

9.46

Isoelectric Point (pI)

30.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	138 - 424	2.9e-37	ABC transporter transmembrane region
ABC_tran	PF00005	487 - 636	3.3e-32	ABC transporter
SMC_N	PF02463	499 - 678	1.4e-06	RecF/RecN/SMC N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28620 AT4G28630 AT5G58270
fragaria_vesca	FvH4_3g41120 FvH4_3g41120 FvH4_3g41120 FvH4_3g41120
malus_domestica	MD03G1047300.v1.1 MD11G1049800.v1.1
prunus_persica	Prupe.6G038500_v2.0.a1
pyrus_communis	pycom03g03730 pycom11g04040
rosa_chinensis	RchiOBHm_Chr5g0073901 RchiOBHm_Chr5g0073961
rosa_laevigata	RLG00000036423
rosa_multiflora	Rmu_sc0000470.1_g000016 Rmu_sc0000470.1_g000034
rosa_roxburghii	Rroxscaffold_1G00007470
rosa_rugosa	Rorug05G0427200
rosa_samantha	Rh5AG484200 Rh5AG484700 Rh5BG504900 Rh5BG505300 Rh5CG528700 Rh5CG529100 Rh5DG517200
rosa_wichuraiana	Rw0G006220 Rw5G045010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	326
AatII	GACGTC	1 cut(s)	339
Acc36I	ACCTGC	1 cut(s)	1492
AccB1I	GGYRCC	2 cut(s)	212, 271
AccI	GTMKAC	1 cut(s)	853
AccII	CGCG	1 cut(s)	572
AccIII	TCCGGA	2 cut(s)	348, 1574
AcoI	YGGCCR	4 cut(s)	247, 495, 1141, 1702
AcsI	RAATTY	4 cut(s)	389, 784, 866, 1935
AcuI	CTGAAG	2 cut(s)	1818, 1959
AcyI	GRCGYC	2 cut(s)	272, 336
AfaI	GTAC	5 cut(s)	365, 819, 994, 1482, 1665
AfiI	CCNNNNNNNGG	6 cut(s)	245, 249, 291, 400, 483, 1402
AgeI	ACCGGT	1 cut(s)	740
AjiI	CACGTC	1 cut(s)	1748
AjnI	CCWGG	2 cut(s)	359, 680
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
AluBI	AGCT	8 cut(s)	472, 1061, 1166, 1261, 1342, 1739, 1901, 2104
AluI	AGCT	8 cut(s)	472, 1061, 1166, 1261, 1342, 1739, 1901, 2104
Alw21I	GWGCWC	1 cut(s)	444
Alw26I	GTCTC	4 cut(s)	91, 1019, 1295, 1362
AlwNI	CAGNNNCTG	2 cut(s)	908, 1345
Aor13HI	TCCGGA	2 cut(s)	348, 1574
AoxI	GGCC	8 cut(s)	40, 247, 293, 495, 963, 975, 1141, 1702
ApeKI	GCWGC	5 cut(s)	908, 1100, 1739, 1751, 1840
ApoI	RAATTY	4 cut(s)	389, 784, 866, 1935
AseI	ATTAAT	1 cut(s)	1017
AsiGI	ACCGGT	1 cut(s)	740
Asp700I	GAANNNNTTC	1 cut(s)	689
AspLEI	GCGC	5 cut(s)	274, 611, 748, 877, 1910
AspS9I	GGNCC	2 cut(s)	277, 2060
AsuC2I	CCSGG	1 cut(s)	251
AsuHPI	GGTGA	3 cut(s)	28, 1238, 1252
AvaII	GGWCC	2 cut(s)	277, 2060
BanI	GGYRCC	2 cut(s)	212, 271
BanII	GRGCYC	1 cut(s)	1818
BauI	CACGAG	1 cut(s)	1857
BbsI	GAAGAC	2 cut(s)	199, 682
Bbv12I	GWGCWC	1 cut(s)	444
BbvI	GCAGC	5 cut(s)	895, 1087, 1726, 1763, 1852
BccI	CCATC	3 cut(s)	1457, 1775, 2156
BceAI	ACGGC	7 cut(s)	262, 308, 461, 510, 759, 1191, 1689
BcgI	CGANNNNNNTGC	2 cut(s)	968, 1002
BciT130I	CCWGG	2 cut(s)	361, 682
BciVI	GTATCC	1 cut(s)	688
BcnI	CCSGG	1 cut(s)	251
BcoDI	GTCTC	4 cut(s)	91, 1019, 1295, 1362
BfaI	CTAG	2 cut(s)	990, 1913
BfmI	CTRYAG	2 cut(s)	12, 28
BfoI	RGCGCY	3 cut(s)	275, 612, 878
BfuAI	ACCTGC	1 cut(s)	1492
BfuI	GTATCC	1 cut(s)	688
BglII	AGATCT	1 cut(s)	342
BisI	GCNGC	9 cut(s)	76, 522, 534, 909, 1101, 1652, 1740, 1752, 1841
BlsI	GCNGC	9 cut(s)	77, 523, 535, 910, 1102, 1653, 1741, 1753, 1842
BmcAI	AGTACT	1 cut(s)	1665
Bme1390I	CCNGG	3 cut(s)	251, 361, 682
Bme18I	GGWCC	2 cut(s)	277, 2060
BmgBI	CACGTC	1 cut(s)	1748
BmgT120I	GGNCC	2 cut(s)	277, 2060
BmiI	GGNNCC	6 cut(s)	214, 273, 456, 1513, 2061, 2062
BmrFI	CCNGG	3 cut(s)	251, 361, 682
BmsI	GCATC	5 cut(s)	26, 976, 1087, 2122, 2131
BpiI	GAAGAC	2 cut(s)	199, 682
BpmI	CTGGAG	2 cut(s)	1367, 2054
Bpu10I	CCTNAGC	3 cut(s)	398, 435, 1397
BpuEI	CTTGAG	2 cut(s)	1640, 1802
BpuMI	CCSGG	1 cut(s)	251
BsaBI	GATNNNNATC	1 cut(s)	676
BsaHI	GRCGYC	2 cut(s)	272, 336
BsaI	GGTCTC	1 cut(s)	1295
BsaJI	CCNNGG	7 cut(s)	130, 290, 414, 477, 492, 1282, 1956
BsaWI	WCCGGW	4 cut(s)	348, 500, 740, 1574
BsaXI	ACNNNNNCTCC	2 cut(s)	71, 101
Bsc4I	CCNNNNNNNGG	6 cut(s)	245, 249, 291, 400, 483, 1402
Bse118I	RCCGGY	2 cut(s)	38, 740
Bse1I	ACTGG	3 cut(s)	861, 1350, 1857
Bse3DI	GCAATG	3 cut(s)	656, 1983, 2013
Bse8I	GATNNNNATC	1 cut(s)	676
BseAI	TCCGGA	2 cut(s)	348, 1574
BseBI	CCWGG	2 cut(s)	361, 682
BseDI	CCNNGG	7 cut(s)	130, 290, 414, 477, 492, 1282, 1956
BseGI	GGATG	2 cut(s)	164, 378
BseJI	GATNNNNATC	1 cut(s)	676
BseLI	CCNNNNNNNGG	6 cut(s)	245, 249, 291, 400, 483, 1402
BseMI	GCAATG	3 cut(s)	656, 1983, 2013
BseMII	CTCAG	2 cut(s)	560, 1555
BseNI	ACTGG	3 cut(s)	861, 1350, 1857
BseX3I	CGGCCG	1 cut(s)	247
BseXI	GCAGC	5 cut(s)	895, 1087, 1726, 1763, 1852
BsgI	GTGCAG	2 cut(s)	1376, 1770
Bsh1236I	CGCG	1 cut(s)	572
Bsh1285I	CGRYCG	1 cut(s)	250
BshFI	GGCC	8 cut(s)	42, 249, 295, 497, 965, 977, 1143, 1704
BshNI	GGYRCC	2 cut(s)	212, 271
BshTI	ACCGGT	1 cut(s)	740
BsiEI	CGRYCG	1 cut(s)	250
BsiHKAI	GWGCWC	1 cut(s)	444
BsiSI	CCGG	8 cut(s)	39, 250, 275, 349, 394, 501, 741, 1575
BslFI	GGGAC	2 cut(s)	2073, 2124
BslI	CCNNNNNNNGG	6 cut(s)	245, 249, 291, 400, 483, 1402
BsmAI	GTCTC	4 cut(s)	91, 1019, 1295, 1362
BsmFI	GGGAC	2 cut(s)	2073, 2124
BsmI	GAATGC	1 cut(s)	1410
BsnI	GGCC	8 cut(s)	42, 249, 295, 497, 965, 977, 1143, 1704
Bso31I	GGTCTC	1 cut(s)	1295
Bsp1286I	GDGCHC	2 cut(s)	444, 1818
Bsp13I	TCCGGA	2 cut(s)	348, 1574
Bsp143I	GATC	4 cut(s)	342, 671, 712, 763
Bsp19I	CCATGG	1 cut(s)	130
BspANI	GGCC	8 cut(s)	42, 249, 295, 497, 965, 977, 1143, 1704
BspCNI	CTCAG	2 cut(s)	559, 1554
BspEI	TCCGGA	2 cut(s)	348, 1574
BspFNI	CGCG	1 cut(s)	572
BspHI	TCATGA	1 cut(s)	1770
BspLI	GGNNCC	6 cut(s)	214, 273, 456, 1513, 2061, 2062
BspMI	ACCTGC	1 cut(s)	1492
BspT107I	GGYRCC	2 cut(s)	212, 271
BspTNI	GGTCTC	1 cut(s)	1295
BsrDI	GCAATG	3 cut(s)	656, 1983, 2013
BsrFI	RCCGGY	2 cut(s)	38, 740
BsrI	ACTGG	3 cut(s)	861, 1350, 1857
BssAI	RCCGGY	2 cut(s)	38, 740
BssECI	CCNNGG	7 cut(s)	130, 290, 414, 477, 492, 1282, 1956
BssMI	GATC	4 cut(s)	342, 671, 712, 763
BssNAI	GTATAC	1 cut(s)	854
BssNI	GRCGYC	2 cut(s)	272, 336
BssSI	CACGAG	1 cut(s)	1857
BssT1I	CCWWGG	4 cut(s)	130, 414, 1282, 1956
Bst1107I	GTATAC	1 cut(s)	854
Bst2BI	CACGAG	1 cut(s)	1857
Bst2UI	CCWGG	2 cut(s)	361, 682
Bst4CI	ACNGT	8 cut(s)	934, 942, 1030, 1222, 1595, 1637, 1663, 2128
Bst6I	CTCTTC	1 cut(s)	1719
BstACI	GRCGYC	2 cut(s)	272, 336
BstAPI	GCANNNNNTGC	2 cut(s)	917, 2141
BstC8I	GCNNGC	4 cut(s)	357, 474, 570, 601
BstDEI	CTNAG	8 cut(s)	398, 435, 546, 648, 728, 1397, 1541, 2082
BstDSI	CCRYGG	4 cut(s)	130, 290, 477, 492
BstF5I	GGATG	2 cut(s)	164, 378
BstFNI	CGCG	1 cut(s)	572
BstH2I	RGCGCY	3 cut(s)	275, 612, 878
BstHHI	GCGC	5 cut(s)	274, 611, 748, 877, 1910
BstKTI	GATC	4 cut(s)	345, 674, 715, 766
BstMAI	GTCTC	4 cut(s)	91, 1019, 1295, 1362
BstMBI	GATC	4 cut(s)	342, 671, 712, 763
BstMCI	CGRYCG	1 cut(s)	250
BstMWI	GCNNNNNNNGC	9 cut(s)	530, 560, 569, 881, 917, 1407, 1748, 1907, 2141
BstNI	CCWGG	2 cut(s)	361, 682
BstSCI	CCNGG	3 cut(s)	249, 359, 680
BstSFI	CTRYAG	2 cut(s)	12, 28
BstUI	CGCG	1 cut(s)	572
BstV1I	GCAGC	5 cut(s)	895, 1087, 1726, 1763, 1852
BstV2I	GAAGAC	2 cut(s)	199, 682
BstX2I	RGATCY	1 cut(s)	342
BstYI	RGATCY	1 cut(s)	342
BstZ17I	GTATAC	1 cut(s)	854
BstZI	CGGCCG	1 cut(s)	247
BsuI	GTATCC	1 cut(s)	688
BsuRI	GGCC	8 cut(s)	42, 249, 295, 497, 965, 977, 1143, 1704
BtgI	CCRYGG	4 cut(s)	130, 290, 477, 492
BtgZI	GCGATG	2 cut(s)	879, 2031
BtrI	CACGTC	1 cut(s)	1748
BtsCI	GGATG	2 cut(s)	164, 378
BtsI	GCAGTG	1 cut(s)	2018
BtsIMutI	CAGTG	3 cut(s)	947, 1850, 2018
BveI	ACCTGC	1 cut(s)	1492
Cac8I	GCNNGC	4 cut(s)	357, 474, 570, 601
CaiI	CAGNNNCTG	2 cut(s)	908, 1345
CciI	TCATGA	1 cut(s)	1770
CfoI	GCGC	5 cut(s)	274, 611, 748, 877, 1910
Cfr10I	RCCGGY	2 cut(s)	38, 740
Cfr13I	GGNCC	2 cut(s)	277, 2060
CseI	GACGC	3 cut(s)	361, 561, 1388
Csp6I	GTAC	5 cut(s)	364, 818, 993, 1481, 1664
CspAI	ACCGGT	1 cut(s)	740
CspCI	CAANNNNNGTGG	2 cut(s)	1807, 1842
CviQI	GTAC	5 cut(s)	364, 818, 993, 1481, 1664
DdeI	CTNAG	8 cut(s)	398, 435, 546, 648, 728, 1397, 1541, 2082
DinI	GGCGCC	1 cut(s)	273
DpnI	GATC	4 cut(s)	344, 673, 714, 765
DpnII	GATC	4 cut(s)	342, 671, 712, 763
DrdI	GACNNNNNNGTC	1 cut(s)	326
DseDI	GACNNNNNNGTC	1 cut(s)	326
EaeI	YGGCCR	4 cut(s)	247, 495, 1141, 1702
EagI	CGGCCG	1 cut(s)	247
Eam1104I	CTCTTC	1 cut(s)	1719
EarI	CTCTTC	1 cut(s)	1719
EciI	GGCGGA	2 cut(s)	208, 228
EclXI	CGGCCG	1 cut(s)	247
Eco130I	CCWWGG	4 cut(s)	130, 414, 1282, 1956
Eco24I	GRGCYC	1 cut(s)	1818
Eco31I	GGTCTC	1 cut(s)	1295
Eco32I	GATATC	3 cut(s)	722, 837, 1470
Eco47I	GGWCC	2 cut(s)	277, 2060
Eco52I	CGGCCG	1 cut(s)	247
Eco57I	CTGAAG	2 cut(s)	1818, 1959
EcoO109I	RGGNCCY	1 cut(s)	2060
EcoRI	GAATTC	1 cut(s)	389
EcoRII	CCWGG	2 cut(s)	359, 680
EcoRV	GATATC	3 cut(s)	722, 837, 1470
EcoT14I	CCWWGG	4 cut(s)	130, 414, 1282, 1956
EcoT38I	GRGCYC	1 cut(s)	1818
EgeI	GGCGCC	1 cut(s)	273
EheI	GGCGCC	1 cut(s)	273
ErhI	CCWWGG	4 cut(s)	130, 414, 1282, 1956
FaqI	GGGAC	2 cut(s)	2073, 2124
FauI	CCCGC	3 cut(s)	232, 577, 1394
FblI	GTMKAC	1 cut(s)	853
Fnu4HI	GCNGC	9 cut(s)	76, 522, 534, 909, 1101, 1652, 1740, 1752, 1841
FokI	GGATG	2 cut(s)	151, 385
FriOI	GRGCYC	1 cut(s)	1818
Fsp4HI	GCNGC	9 cut(s)	76, 522, 534, 909, 1101, 1652, 1740, 1752, 1841
FspBI	CTAG	2 cut(s)	990, 1913
GlaI	GCGC	5 cut(s)	273, 610, 747, 876, 1909
GluI	GCNGC	9 cut(s)	76, 522, 534, 909, 1101, 1652, 1740, 1752, 1841
GsuI	CTGGAG	2 cut(s)	1367, 2054
HaeII	RGCGCY	3 cut(s)	275, 612, 878
HaeIII	GGCC	8 cut(s)	42, 249, 295, 497, 965, 977, 1143, 1704
HapII	CCGG	8 cut(s)	39, 250, 275, 349, 394, 501, 741, 1575
HgaI	GACGC	3 cut(s)	361, 561, 1388
HhaI	GCGC	5 cut(s)	274, 611, 748, 877, 1910
Hin1I	GRCGYC	2 cut(s)	272, 336
Hin6I	GCGC	5 cut(s)	272, 609, 746, 875, 1908
HinP1I	GCGC	5 cut(s)	272, 609, 746, 875, 1908
HincII	GTYRAC	3 cut(s)	489, 1321, 1533
HindII	GTYRAC	3 cut(s)	489, 1321, 1533
HinfI	GANTC	6 cut(s)	33, 177, 313, 544, 1007, 1456
HpaII	CCGG	8 cut(s)	39, 250, 275, 349, 394, 501, 741, 1575
HphI	GGTGA	3 cut(s)	28, 1238, 1252
Hpy166II	GTNNAC	4 cut(s)	489, 854, 1321, 1533
Hpy188I	TCNGA	5 cut(s)	543, 671, 1134, 1206, 1544
Hpy8I	GTNNAC	4 cut(s)	489, 854, 1321, 1533
Hpy99I	CGWCG	4 cut(s)	323, 338, 577, 1749
HpyAV	CCTTC	7 cut(s)	53, 77, 136, 243, 679, 955, 1043
HpyCH4III	ACNGT	8 cut(s)	934, 942, 1030, 1222, 1595, 1637, 1663, 2128
HpyCH4IV	ACGT	5 cut(s)	52, 336, 1117, 1425, 1747
HpyF10VI	GCNNNNNNNGC	9 cut(s)	530, 560, 569, 881, 917, 1407, 1748, 1907, 2141
HpyF3I	CTNAG	8 cut(s)	398, 435, 546, 648, 728, 1397, 1541, 2082
HpySE526I	ACGT	5 cut(s)	52, 336, 1117, 1425, 1747
Hsp92I	GRCGYC	2 cut(s)	272, 336
HspAI	GCGC	5 cut(s)	272, 609, 746, 875, 1908
KasI	GGCGCC	1 cut(s)	271
KflI	GGGWCCC	1 cut(s)	2060
Kpn2I	TCCGGA	2 cut(s)	348, 1574
Kzo9I	GATC	4 cut(s)	342, 671, 712, 763
LmnI	GCTCC	2 cut(s)	872, 1407
Lsp1109I	GCAGC	5 cut(s)	895, 1087, 1726, 1763, 1852
LweI	GCATC	5 cut(s)	26, 976, 1087, 2122, 2131
MaeI	CTAG	2 cut(s)	990, 1913
MaeII	ACGT	5 cut(s)	52, 336, 1117, 1425, 1747
MaeIII	GTNAC	5 cut(s)	34, 301, 934, 1436, 1612
MalI	GATC	4 cut(s)	344, 673, 714, 765
MboI	GATC	4 cut(s)	342, 671, 712, 763
MfeI	CAATTG	1 cut(s)	1002
MflI	RGATCY	1 cut(s)	342
MhlI	GDGCHC	2 cut(s)	444, 1818
Mly113I	GGCGCC	1 cut(s)	272
MlyI	GAGTC	3 cut(s)	42, 307, 538
MmeI	TCCRAC	2 cut(s)	566, 1489
MroI	TCCGGA	2 cut(s)	348, 1574
MroXI	GAANNNNTTC	1 cut(s)	689
MseI	TTAA	5 cut(s)	1017, 1082, 1106, 1823, 1940
MslI	CAYNNNNRTG	1 cut(s)	702
MspA1I	CMGCKG	1 cut(s)	1518
MspI	CCGG	8 cut(s)	39, 250, 275, 349, 394, 501, 741, 1575
MspR9I	CCNGG	3 cut(s)	251, 361, 682
MunI	CAATTG	1 cut(s)	1002
Mva1269I	GAATGC	1 cut(s)	1410
MvaI	CCWGG	2 cut(s)	361, 682
MvnI	CGCG	1 cut(s)	572
MwoI	GCNNNNNNNGC	9 cut(s)	530, 560, 569, 881, 917, 1407, 1748, 1907, 2141
NarI	GGCGCC	1 cut(s)	272
NciI	CCSGG	1 cut(s)	251
NcoI	CCATGG	1 cut(s)	130
NdeII	GATC	4 cut(s)	342, 671, 712, 763
NlaIV	GGNNCC	6 cut(s)	214, 273, 456, 1513, 2061, 2062
NmuCI	GTSAC	3 cut(s)	34, 301, 1612
PagI	TCATGA	1 cut(s)	1770
PcsI	WCGNNNNNNNCGW	1 cut(s)	772
PctI	GAATGC	1 cut(s)	1410
PdmI	GAANNNNTTC	1 cut(s)	689
PfeI	GAWTC	3 cut(s)	177, 1007, 1456
PfoI	TCCNGGA	1 cut(s)	680
PinAI	ACCGGT	1 cut(s)	740
PkrI	GCNGC	9 cut(s)	77, 523, 535, 910, 1102, 1653, 1741, 1753, 1842
PleI	GAGTC	3 cut(s)	41, 307, 538
PluTI	GGCGCC	1 cut(s)	275
PpsI	GAGTC	3 cut(s)	41, 307, 538
PpuMI	RGGWCCY	1 cut(s)	2060
PshBI	ATTAAT	1 cut(s)	1017
Psp5II	RGGWCCY	1 cut(s)	2060
Psp6I	CCWGG	2 cut(s)	359, 680
PspGI	CCWGG	2 cut(s)	359, 680
PspN4I	GGNNCC	6 cut(s)	214, 273, 456, 1513, 2061, 2062
PspPI	GGNCC	2 cut(s)	277, 2060
PspPPI	RGGWCCY	1 cut(s)	2060
PstNI	CAGNNNCTG	2 cut(s)	908, 1345
PsuI	RGATCY	1 cut(s)	342
RsaI	GTAC	5 cut(s)	365, 819, 994, 1482, 1665
RsaNI	GTAC	5 cut(s)	364, 818, 993, 1481, 1664
RseI	CAYNNNNRTG	1 cut(s)	702
SaqAI	TTAA	5 cut(s)	1017, 1082, 1106, 1823, 1940
SatI	GCNGC	9 cut(s)	76, 522, 534, 909, 1101, 1652, 1740, 1752, 1841
Sau3AI	GATC	4 cut(s)	342, 671, 712, 763
Sau96I	GGNCC	2 cut(s)	277, 2060
ScaI	AGTACT	1 cut(s)	1665
SchI	GAGTC	3 cut(s)	42, 307, 538
ScrFI	CCNGG	3 cut(s)	251, 361, 682
SduI	GDGCHC	2 cut(s)	444, 1818
SfaNI	GCATC	5 cut(s)	26, 976, 1087, 2122, 2131
SfcI	CTRYAG	2 cut(s)	12, 28
SfoI	GGCGCC	1 cut(s)	273
SinI	GGWCC	2 cut(s)	277, 2060
SmiMI	CAYNNNNRTG	1 cut(s)	702
SmlI	CTYRAG	2 cut(s)	1619, 1817
SmoI	CTYRAG	2 cut(s)	1619, 1817
SspDI	GGCGCC	1 cut(s)	271
SspI	AATATT	1 cut(s)	1037
SspMI	CTAG	2 cut(s)	990, 1913
StyD4I	CCNGG	3 cut(s)	249, 359, 680
StyI	CCWWGG	4 cut(s)	130, 414, 1282, 1956
TaaI	ACNGT	8 cut(s)	934, 942, 1030, 1222, 1595, 1637, 1663, 2128
TaiI	ACGT	5 cut(s)	55, 339, 1120, 1428, 1750
TaqI	TCGA	6 cut(s)	20, 718, 733, 1606, 1744, 2139
TatI	WGTACW	1 cut(s)	1663
TauI	GCSGC	4 cut(s)	78, 524, 536, 1654
TfiI	GAWTC	3 cut(s)	177, 1007, 1456
Tru1I	TTAA	5 cut(s)	1017, 1082, 1106, 1823, 1940
Tru9I	TTAA	5 cut(s)	1017, 1082, 1106, 1823, 1940
TscAI	CASTG	3 cut(s)	947, 1857, 2018
TseFI	GTSAC	3 cut(s)	34, 301, 1612
TseI	GCWGC	5 cut(s)	908, 1100, 1739, 1751, 1840
Tsp45I	GTSAC	3 cut(s)	34, 301, 1612
TspGWI	ACGGA	2 cut(s)	447, 1460
TspRI	CASTG	3 cut(s)	947, 1857, 2018
VpaK11BI	GGWCC	2 cut(s)	277, 2060
VspI	ATTAAT	1 cut(s)	1017
XapI	RAATTY	4 cut(s)	389, 784, 866, 1935
XmiI	GTMKAC	1 cut(s)	853
XmnI	GAANNNNTTC	1 cut(s)	689
XspI	CTAG	2 cut(s)	990, 1913
ZraI	GACGTC	1 cut(s)	337
ZrmI	AGTACT	1 cut(s)	1665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.