lysine-specific demethylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20810 AT3G20810 AT3G20810 AT3G20810 AT3G20810 |
| fragaria_vesca | FvH4_3g43600 |
| malus_domestica | MD03G1020700.v1.1 MD11G1022300.v1.1 |
| prunus_persica | Prupe.6G015700_v2.0.a1 |
| pyrus_communis | pycom03g01760 pycom11g01790 |
| rosa_chinensis | RchiOBHm_Chr5g0078171 RchiOBHm_Chr5g0078191 RchiOBHm_Chr5g0078281 RchiOBHm_Chr5g0078291 |
| rosa_laevigata | RLG00000036759 RLG00000036763 |
| rosa_multiflora | Rmu_sc0000631.1_g000035 Rmu_sc0005194.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00003960 |
| rosa_rugosa | Rorug03G0196500 Rorug05G0459500.1 Rorug05G0459800 |
| rosa_samantha | Rh5AG513800 Rh5BG536800 Rh5CG560200 Rh5DG548400 Rh6BG257500 |
| rosa_wichuraiana | Rw5G047680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 679 |
| AccII | CGCG | 8 cut(s) | 147, 168, 170, 186, 246, 321, 398, 408 |
| AclWI | GGATC | 3 cut(s) | 375, 589, 938 |
| AcoI | YGGCCR | 2 cut(s) | 617, 621 |
| AcsI | RAATTY | 2 cut(s) | 1091, 1115 |
| AcyI | GRCGYC | 1 cut(s) | 312 |
| AdeI | CACNNNGTG | 1 cut(s) | 1180 |
| AfaI | GTAC | 3 cut(s) | 165, 710, 769 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 219, 343, 346, 411, 412, 439, 451, 672 |
| AgsI | TTSAA | 1 cut(s) | 361 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 79 |
| AhlI | ACTAGT | 1 cut(s) | 1196 |
| AjiI | CACGTC | 1 cut(s) | 274 |
| AjnI | CCWGG | 3 cut(s) | 194, 218, 623 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 272, 304 |
| AleI | CACNNNNGTG | 1 cut(s) | 1165 |
| AluBI | AGCT | 6 cut(s) | 205, 283, 730, 835, 1212, 1241 |
| AluI | AGCT | 6 cut(s) | 205, 283, 730, 835, 1212, 1241 |
| Alw21I | GWGCWC | 1 cut(s) | 114 |
| Alw26I | GTCTC | 3 cut(s) | 109, 397, 1191 |
| AlwI | GGATC | 3 cut(s) | 375, 589, 938 |
| ApaI | GGGCCC | 1 cut(s) | 219 |
| ApeKI | GCWGC | 2 cut(s) | 202, 835 |
| ApoI | RAATTY | 2 cut(s) | 1091, 1115 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1091 |
| AspLEI | GCGC | 5 cut(s) | 149, 170, 246, 323, 410 |
| AsuC2I | CCSGG | 3 cut(s) | 214, 579, 914 |
| AsuHPI | GGTGA | 4 cut(s) | 311, 538, 680, 1154 |
| AvaII | GGWCC | 4 cut(s) | 350, 442, 454, 891 |
| BaeGI | GKGCMC | 1 cut(s) | 219 |
| BanI | GGYRCC | 1 cut(s) | 679 |
| BanII | GRGCYC | 1 cut(s) | 219 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 760, 792 |
| Bbv12I | GWGCWC | 1 cut(s) | 114 |
| BbvI | GCAGC | 2 cut(s) | 214, 822 |
| BccI | CCATC | 2 cut(s) | 184, 475 |
| BceAI | ACGGC | 3 cut(s) | 130, 365, 445 |
| BciT130I | CCWGG | 3 cut(s) | 196, 220, 625 |
| BclI | TGATCA | 1 cut(s) | 820 |
| BcnI | CCSGG | 3 cut(s) | 214, 579, 914 |
| BcoDI | GTCTC | 3 cut(s) | 109, 397, 1191 |
| BcuI | ACTAGT | 1 cut(s) | 1196 |
| BfaI | CTAG | 4 cut(s) | 411, 1070, 1121, 1197 |
| BlpI | GCTNAGC | 1 cut(s) | 804 |
| Bme1390I | CCNGG | 6 cut(s) | 196, 214, 220, 579, 625, 914 |
| Bme18I | GGWCC | 4 cut(s) | 350, 442, 454, 891 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 79 |
| BmgBI | CACGTC | 1 cut(s) | 274 |
| BmiI | GGNNCC | 4 cut(s) | 217, 351, 433, 681 |
| BmrFI | CCNGG | 6 cut(s) | 196, 214, 220, 579, 625, 914 |
| BmsI | GCATC | 1 cut(s) | 482 |
| Bpu10I | CCTNAGC | 1 cut(s) | 966 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 804 |
| BpuEI | CTTGAG | 2 cut(s) | 773, 1039 |
| BpuMI | CCSGG | 3 cut(s) | 214, 579, 914 |
| BsaHI | GRCGYC | 1 cut(s) | 312 |
| BsaI | GGTCTC | 1 cut(s) | 1191 |
| BsaJI | CCNNGG | 4 cut(s) | 195, 218, 420, 1098 |
| BsaWI | WCCGGW | 1 cut(s) | 672 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 219, 343, 346, 411, 412, 439, 451, 672 |
| Bse118I | RCCGGY | 7 cut(s) | 155, 296, 447, 586, 619, 665, 682 |
| Bse3DI | GCAATG | 1 cut(s) | 264 |
| BseBI | CCWGG | 3 cut(s) | 196, 220, 625 |
| BseDI | CCNNGG | 4 cut(s) | 195, 218, 420, 1098 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 219, 343, 346, 411, 412, 439, 451, 672 |
| BseMI | GCAATG | 1 cut(s) | 264 |
| BseMII | CTCAG | 2 cut(s) | 818, 980 |
| BseRI | GAGGAG | 2 cut(s) | 83, 329 |
| BseSI | GKGCMC | 1 cut(s) | 219 |
| BseXI | GCAGC | 2 cut(s) | 214, 822 |
| BseYI | CCCAGC | 1 cut(s) | 917 |
| BsgI | GTGCAG | 2 cut(s) | 254, 1124 |
| Bsh1236I | CGCG | 8 cut(s) | 147, 168, 170, 186, 246, 321, 398, 408 |
| BshNI | GGYRCC | 1 cut(s) | 679 |
| BsiHKAI | GWGCWC | 1 cut(s) | 114 |
| BsiWI | CGTACG | 1 cut(s) | 163 |
| BslFI | GGGAC | 3 cut(s) | 363, 773, 934 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 219, 343, 346, 411, 412, 439, 451, 672 |
| BsmAI | GTCTC | 3 cut(s) | 109, 397, 1191 |
| BsmBI | CGTCTC | 1 cut(s) | 109 |
| BsmFI | GGGAC | 3 cut(s) | 363, 773, 934 |
| Bso31I | GGTCTC | 1 cut(s) | 1191 |
| Bsp120I | GGGCCC | 1 cut(s) | 215 |
| Bsp1286I | GDGCHC | 2 cut(s) | 114, 219 |
| Bsp143I | GATC | 5 cut(s) | 367, 581, 820, 943, 1066 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 804 |
| Bsp68I | TCGCGA | 1 cut(s) | 186 |
| BspCNI | CTCAG | 2 cut(s) | 817, 979 |
| BspFNI | CGCG | 8 cut(s) | 147, 168, 170, 186, 246, 321, 398, 408 |
| BspLI | GGNNCC | 4 cut(s) | 217, 351, 433, 681 |
| BspPI | GGATC | 3 cut(s) | 375, 589, 938 |
| BspT107I | GGYRCC | 1 cut(s) | 679 |
| BspTNI | GGTCTC | 1 cut(s) | 1191 |
| BsrDI | GCAATG | 1 cut(s) | 264 |
| BsrFI | RCCGGY | 7 cut(s) | 155, 296, 447, 586, 619, 665, 682 |
| BssAI | RCCGGY | 7 cut(s) | 155, 296, 447, 586, 619, 665, 682 |
| BssECI | CCNNGG | 4 cut(s) | 195, 218, 420, 1098 |
| BssMI | GATC | 5 cut(s) | 367, 581, 820, 943, 1066 |
| BssNI | GRCGYC | 1 cut(s) | 312 |
| BssT1I | CCWWGG | 1 cut(s) | 1098 |
| Bst2UI | CCWGG | 3 cut(s) | 196, 220, 625 |
| Bst4CI | ACNGT | 3 cut(s) | 103, 679, 1235 |
| Bst6I | CTCTTC | 1 cut(s) | 781 |
| BstACI | GRCGYC | 1 cut(s) | 312 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1180 |
| BstC8I | GCNNGC | 5 cut(s) | 157, 184, 265, 269, 621 |
| BstDEI | CTNAG | 4 cut(s) | 630, 804, 887, 966 |
| BstEII | GGTNACC | 1 cut(s) | 668 |
| BstFNI | CGCG | 8 cut(s) | 147, 168, 170, 186, 246, 321, 398, 408 |
| BstHHI | GCGC | 5 cut(s) | 149, 170, 246, 323, 410 |
| BstKTI | GATC | 5 cut(s) | 370, 584, 823, 946, 1069 |
| BstMAI | GTCTC | 3 cut(s) | 109, 397, 1191 |
| BstMBI | GATC | 5 cut(s) | 367, 581, 820, 943, 1066 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 11, 23, 32, 146, 165, 176, 179, 320, 1180 |
| BstNI | CCWGG | 3 cut(s) | 196, 220, 625 |
| BstNSI | RCATGY | 1 cut(s) | 1150 |
| BstPI | GGTNACC | 1 cut(s) | 668 |
| BstSCI | CCNGG | 6 cut(s) | 194, 212, 218, 577, 623, 912 |
| BstSLI | GKGCMC | 1 cut(s) | 219 |
| BstUI | CGCG | 8 cut(s) | 147, 168, 170, 186, 246, 321, 398, 408 |
| BstV1I | GCAGC | 2 cut(s) | 214, 822 |
| BstX2I | RGATCY | 1 cut(s) | 367 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1167, 1170 |
| BstYI | RGATCY | 1 cut(s) | 367 |
| BtrI | CACGTC | 1 cut(s) | 274 |
| BtuMI | TCGCGA | 1 cut(s) | 186 |
| Cac8I | GCNNGC | 5 cut(s) | 157, 184, 265, 269, 621 |
| CfoI | GCGC | 5 cut(s) | 149, 170, 246, 323, 410 |
| Cfr10I | RCCGGY | 7 cut(s) | 155, 296, 447, 586, 619, 665, 682 |
| CseI | GACGC | 2 cut(s) | 257, 320 |
| Csp6I | GTAC | 3 cut(s) | 164, 709, 768 |
| CviAII | CATG | 7 cut(s) | 136, 331, 343, 643, 941, 1042, 1147 |
| CviQI | GTAC | 3 cut(s) | 164, 709, 768 |
| DdeI | CTNAG | 4 cut(s) | 630, 804, 887, 966 |
| DpnI | GATC | 5 cut(s) | 369, 583, 822, 945, 1068 |
| DpnII | GATC | 5 cut(s) | 367, 581, 820, 943, 1066 |
| DraIII | CACNNNGTG | 1 cut(s) | 1180 |
| DriI | GACNNNNNGTC | 1 cut(s) | 79 |
| EaeI | YGGCCR | 2 cut(s) | 617, 621 |
| Eam1104I | CTCTTC | 1 cut(s) | 781 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 79 |
| EarI | CTCTTC | 1 cut(s) | 781 |
| EciI | GGCGGA | 4 cut(s) | 22, 76, 188, 367 |
| Eco130I | CCWWGG | 1 cut(s) | 1098 |
| Eco24I | GRGCYC | 1 cut(s) | 219 |
| Eco31I | GGTCTC | 1 cut(s) | 1191 |
| Eco47I | GGWCC | 4 cut(s) | 350, 442, 454, 891 |
| Eco91I | GGTNACC | 1 cut(s) | 668 |
| EcoO109I | RGGNCCY | 1 cut(s) | 216 |
| EcoO65I | GGTNACC | 1 cut(s) | 668 |
| EcoRI | GAATTC | 1 cut(s) | 1091 |
| EcoRII | CCWGG | 3 cut(s) | 194, 218, 623 |
| EcoT14I | CCWWGG | 1 cut(s) | 1098 |
| EcoT38I | GRGCYC | 1 cut(s) | 219 |
| ErhI | CCWWGG | 1 cut(s) | 1098 |
| Esp3I | CGTCTC | 1 cut(s) | 109 |
| FaeI | CATG | 7 cut(s) | 139, 334, 346, 646, 944, 1045, 1150 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 272, 304 |
| FaqI | GGGAC | 3 cut(s) | 363, 773, 934 |
| FatI | CATG | 7 cut(s) | 135, 330, 342, 642, 940, 1041, 1146 |
| FauI | CCCGC | 2 cut(s) | 19, 413 |
| FauNDI | CATATG | 1 cut(s) | 848 |
| FbaI | TGATCA | 1 cut(s) | 820 |
| FriOI | GRGCYC | 1 cut(s) | 219 |
| FseI | GGCCGGCC | 1 cut(s) | 623 |
| FspBI | CTAG | 4 cut(s) | 411, 1070, 1121, 1197 |
| GlaI | GCGC | 5 cut(s) | 148, 169, 245, 322, 409 |
| GsaI | CCCAGC | 1 cut(s) | 921 |
| HgaI | GACGC | 2 cut(s) | 257, 320 |
| HhaI | GCGC | 5 cut(s) | 149, 170, 246, 323, 410 |
| Hin1I | GRCGYC | 1 cut(s) | 312 |
| Hin1II | CATG | 7 cut(s) | 139, 334, 346, 646, 944, 1045, 1150 |
| Hin6I | GCGC | 5 cut(s) | 147, 168, 244, 321, 408 |
| HinP1I | GCGC | 5 cut(s) | 147, 168, 244, 321, 408 |
| HindIII | AAGCTT | 1 cut(s) | 281 |
| HinfI | GANTC | 5 cut(s) | 41, 74, 80, 760, 773 |
| HphI | GGTGA | 4 cut(s) | 311, 538, 680, 1154 |
| Hpy166II | GTNNAC | 1 cut(s) | 894 |
| Hpy188III | TCNNGA | 8 cut(s) | 185, 326, 752, 790, 857, 1070, 1121, 1248 |
| Hpy8I | GTNNAC | 1 cut(s) | 894 |
| Hpy99I | CGWCG | 4 cut(s) | 164, 251, 278, 314 |
| HpyAV | CCTTC | 2 cut(s) | 545, 1133 |
| HpyCH4III | ACNGT | 3 cut(s) | 103, 679, 1235 |
| HpyCH4IV | ACGT | 4 cut(s) | 129, 162, 273, 737 |
| HpyCH4V | TGCA | 4 cut(s) | 271, 1050, 1105, 1128 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 11, 23, 32, 146, 165, 176, 179, 320, 1180 |
| HpyF3I | CTNAG | 4 cut(s) | 630, 804, 887, 966 |
| HpySE526I | ACGT | 4 cut(s) | 129, 162, 273, 737 |
| Hsp92I | GRCGYC | 1 cut(s) | 312 |
| Hsp92II | CATG | 7 cut(s) | 139, 334, 346, 646, 944, 1045, 1150 |
| HspAI | GCGC | 5 cut(s) | 147, 168, 244, 321, 408 |
| KroI | GCCGGC | 2 cut(s) | 155, 619 |
| KroNI | GCCGGC | 2 cut(s) | 157, 621 |
| Ksp22I | TGATCA | 1 cut(s) | 820 |
| Kzo9I | GATC | 5 cut(s) | 367, 581, 820, 943, 1066 |
| LmnI | GCTCC | 2 cut(s) | 199, 210 |
| Lsp1109I | GCAGC | 2 cut(s) | 214, 822 |
| LweI | GCATC | 1 cut(s) | 482 |
| MaeI | CTAG | 4 cut(s) | 411, 1070, 1121, 1197 |
| MaeII | ACGT | 4 cut(s) | 129, 162, 273, 737 |
| MaeIII | GTNAC | 3 cut(s) | 458, 668, 1142 |
| MalI | GATC | 5 cut(s) | 369, 583, 822, 945, 1068 |
| MboI | GATC | 5 cut(s) | 367, 581, 820, 943, 1066 |
| MboII | GAAGA | 3 cut(s) | 541, 768, 991 |
| MflI | RGATCY | 1 cut(s) | 367 |
| MhlI | GDGCHC | 2 cut(s) | 114, 219 |
| MluCI | AATT | 4 cut(s) | 436, 700, 1091, 1115 |
| MlyI | GAGTC | 4 cut(s) | 35, 68, 89, 767 |
| MmeI | TCCRAC | 3 cut(s) | 69, 333, 466 |
| MreI | CGCCGGCG | 1 cut(s) | 155 |
| MroNI | GCCGGC | 2 cut(s) | 155, 619 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1091 |
| MseI | TTAA | 1 cut(s) | 656 |
| MslI | CAYNNNNRTG | 2 cut(s) | 954, 1165 |
| MspR9I | CCNGG | 6 cut(s) | 196, 214, 220, 579, 625, 914 |
| MvaI | CCWGG | 3 cut(s) | 196, 220, 625 |
| MvnI | CGCG | 8 cut(s) | 147, 168, 170, 186, 246, 321, 398, 408 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 11, 23, 32, 146, 165, 176, 179, 320, 1180 |
| NaeI | GCCGGC | 2 cut(s) | 157, 621 |
| NciI | CCSGG | 3 cut(s) | 214, 579, 914 |
| NdeI | CATATG | 1 cut(s) | 848 |
| NdeII | GATC | 5 cut(s) | 367, 581, 820, 943, 1066 |
| NgoMIV | GCCGGC | 2 cut(s) | 155, 619 |
| NlaIII | CATG | 7 cut(s) | 139, 334, 346, 646, 944, 1045, 1150 |
| NlaIV | GGNNCC | 4 cut(s) | 217, 351, 433, 681 |
| NmuCI | GTSAC | 3 cut(s) | 458, 668, 1142 |
| NruI | TCGCGA | 1 cut(s) | 186 |
| NspI | RCATGY | 1 cut(s) | 1150 |
| OliI | CACNNNNGTG | 1 cut(s) | 1165 |
| PdiI | GCCGGC | 2 cut(s) | 157, 621 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1091 |
| PfeI | GAWTC | 1 cut(s) | 760 |
| Pfl23II | CGTACG | 1 cut(s) | 163 |
| PleI | GAGTC | 4 cut(s) | 35, 68, 88, 767 |
| PpsI | GAGTC | 4 cut(s) | 35, 68, 88, 767 |
| Psp6I | CCWGG | 3 cut(s) | 194, 218, 623 |
| PspEI | GGTNACC | 1 cut(s) | 668 |
| PspFI | CCCAGC | 1 cut(s) | 917 |
| PspGI | CCWGG | 3 cut(s) | 194, 218, 623 |
| PspLI | CGTACG | 1 cut(s) | 163 |
| PspN4I | GGNNCC | 4 cut(s) | 217, 351, 433, 681 |
| PspOMI | GGGCCC | 1 cut(s) | 215 |
| PsuI | RGATCY | 1 cut(s) | 367 |
| RigI | GGCCGGCC | 1 cut(s) | 623 |
| RruI | TCGCGA | 1 cut(s) | 186 |
| RsaI | GTAC | 3 cut(s) | 165, 710, 769 |
| RsaNI | GTAC | 3 cut(s) | 164, 709, 768 |
| RseI | CAYNNNNRTG | 2 cut(s) | 954, 1165 |
| SaqAI | TTAA | 1 cut(s) | 656 |
| Sau3AI | GATC | 5 cut(s) | 367, 581, 820, 943, 1066 |
| SchI | GAGTC | 4 cut(s) | 35, 68, 89, 767 |
| ScrFI | CCNGG | 6 cut(s) | 196, 214, 220, 579, 625, 914 |
| SduI | GDGCHC | 2 cut(s) | 114, 219 |
| SfaNI | GCATC | 1 cut(s) | 482 |
| SgrAI | CRCCGGYG | 2 cut(s) | 155, 296 |
| SinI | GGWCC | 4 cut(s) | 350, 442, 454, 891 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 954, 1165 |
| SmlI | CTYRAG | 2 cut(s) | 752, 1054 |
| SmoI | CTYRAG | 2 cut(s) | 752, 1054 |
| SpeI | ACTAGT | 1 cut(s) | 1196 |
| Sse9I | AATT | 4 cut(s) | 436, 700, 1091, 1115 |
| SspMI | CTAG | 4 cut(s) | 411, 1070, 1121, 1197 |
| StyD4I | CCNGG | 6 cut(s) | 194, 212, 218, 577, 623, 912 |
| StyI | CCWWGG | 1 cut(s) | 1098 |
| TaaI | ACNGT | 3 cut(s) | 103, 679, 1235 |
| TaiI | ACGT | 4 cut(s) | 132, 165, 276, 740 |
| TaqI | TCGA | 2 cut(s) | 72, 327 |
| TasI | AATT | 4 cut(s) | 436, 700, 1091, 1115 |
| TauI | GCSGC | 8 cut(s) | 17, 38, 120, 152, 155, 173, 182, 296 |
| TfiI | GAWTC | 1 cut(s) | 760 |
| Tru1I | TTAA | 1 cut(s) | 656 |
| Tru9I | TTAA | 1 cut(s) | 656 |
| TseFI | GTSAC | 3 cut(s) | 458, 668, 1142 |
| TseI | GCWGC | 2 cut(s) | 202, 835 |
| Tsp45I | GTSAC | 3 cut(s) | 458, 668, 1142 |
| TspDTI | ATGAA | 1 cut(s) | 996 |
| TspGWI | ACGGA | 1 cut(s) | 446 |
| VpaK11BI | GGWCC | 4 cut(s) | 350, 442, 454, 891 |
| XapI | RAATTY | 2 cut(s) | 1091, 1115 |
| XbaI | TCTAGA | 2 cut(s) | 1069, 1120 |
| XceI | RCATGY | 1 cut(s) | 1150 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1167 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1091 |
| XspI | CTAG | 4 cut(s) | 411, 1070, 1121, 1197 |