Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005300

Physical Location & Seq

Genomic Coordinates Forward (+)

84099139 .. 84102327

Gene Structure 3189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ35271

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1233 bp

ATGGCCAACTCCGACCACCACCAGCACCTCCCCACCCCGACCCTCGACTCCGAGTCCTCCACGCTCCTCCACACCCTCTCCGAGCACGGCGGCTACGCCTACGTCAGCATGGCCACACGCGCCGCCGCCGGAGACGTCCGCGCCGCCGAGGCCGCTCGCGAGATGGCCTGGGAGCAGCTCCACTCCGGTCCCTGGCACTCCGTCCTCCCTGTCTGGCGCGACGCCTACGCAATGGCCTGCCTCCACGTCGCCAAGCTCCACTTCGCCGCCGCTGAGTTCACCGACGCCCTCCGGGCCCTCGACATGGGCCTCCTCATGGGCGGCCCGCTTTTCAAATCGGACCTCCACGCCGCCGTGACTAAAGTCTCCGCTAAATCCAGACCGGCCGCCGCTAGGGTTTCCAAACAAAACGGCCCCAATTTGGACCGCCGTCTGGTCCGTCACGACCTCAAAGCAACGGAGATGCTTGGGGTTTTGCCTCCAAAATCACTATCTTGTAAAACGGTTGTGAAGAAGTCTGGTCTTTCTTTGGAAGGGTTTTTAAGAGAACATTTCTTACCGGGATCGCCGGTTATTTTGACTGATTGTATGGCTCATTGGCCGGCGAGGGCGAAGTGGAATGACATGGATTACCTGATAAGAGTGGCCGGTGACCGGACGGTGCCGGTTGAGGTTGGCAAAAATTACTTGTATCCGGAGTGGAAGCAGGAGCTTATTACGTTTTCGCAGTTTCTTGAGAGGATTCGGGGTAATGACTCTTCCTCTGGTGCCCCGACGTATCTTGCTCAGCACTCATTGTTTGATCAGATAAACGAGCTGCGTGAGGACATATGTATTCCCGACTATTGTTGTGCTGGTGGTGGGGAACTAAAGTCTCTAAATGCTTGGTTTGGTCCGGCTGGGACTGTAACCCCATTACACCATGATCCGCACCATAATGTGTTCGCGCAGGTAGTTGGAAAAAAGTATATAAGGCTCTATTGTGCTTCATTGTCAGAGGAACTCTATCCACATACTGAAACCATGCTTTGCAACTCAAGTCAGGTTGATCTTGACAATGTAGATGAGAAAGAATTCCCGGAGGTGCAGGACTTAGAATTTCTTGACTGCATATTAGAGGAAGGTGACATGCTTTATATCCCACCAAAGTGGTGGCACTATGTGCGGTCTCTGACAACAAGTATGTCAGTTAGCTTTTGGTGGAGTGATTATGACAGTTCAGCTACGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000086 GO:0000278 GO:0003674 GO:0003682 GO:0003700 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006807 GO:0006996 GO:0007049 GO:0007623 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008214 GO:0008276 GO:0008757 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010452 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016278 GO:0016279 GO:0016491 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016705 GO:0016706 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032259 GO:0032451 GO:0032452 GO:0034968 GO:0036211 GO:0042054 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0044839 GO:0045893 GO:0045935 GO:0046975 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051213 GO:0051252 GO:0051254 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:0140110 GO:1901564 GO:1902680 GO:1903047 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_8

Protein Analysis

410

Amino Acids

45.84

Weight (kDa)

5.77

Isoelectric Point (pI)

41.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_KDM8_N	PF24472	12 - 132	9.7e-63	KDM8-like, N-terminal ARM repeats
Cupin_8	PF13621	180 - 403	5.7e-49	Cupin-like domain
JmjC_2	PF08007	293 - 399	2.7e-11	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20810 AT3G20810 AT3G20810 AT3G20810 AT3G20810
fragaria_vesca	FvH4_3g43600
malus_domestica	MD03G1020700.v1.1 MD11G1022300.v1.1
prunus_persica	Prupe.6G015700_v2.0.a1
pyrus_communis	pycom03g01760 pycom11g01790
rosa_chinensis	RchiOBHm_Chr5g0078171 RchiOBHm_Chr5g0078191 RchiOBHm_Chr5g0078281 RchiOBHm_Chr5g0078291
rosa_laevigata	RLG00000036759 RLG00000036763
rosa_multiflora	Rmu_sc0000631.1_g000035 Rmu_sc0005194.1_g000006
rosa_roxburghii	Rroxscaffold_1G00003960
rosa_rugosa	Rorug03G0196500 Rorug05G0459500.1 Rorug05G0459800
rosa_samantha	Rh5AG513800 Rh5BG536800 Rh5CG560200 Rh5DG548400 Rh6BG257500
rosa_wichuraiana	Rw5G047680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	138
Acc36I	ACCTGC	1 cut(s)	940
AccB1I	GGYRCC	2 cut(s)	661, 767
AccBSI	CCGCTC	1 cut(s)	155
AccII	CGCG	5 cut(s)	120, 141, 159, 219, 947
AccIII	TCCGGA	1 cut(s)	694
AclWI	GGATC	2 cut(s)	571, 920
AcoI	YGGCCR	5 cut(s)	3, 111, 384, 599, 645
AcsI	RAATTY	2 cut(s)	1073, 1097
AcyI	GRCGYC	3 cut(s)	135, 222, 285
AdeI	CACNNNGTG	1 cut(s)	1162
AfiI	CCNNNNNNNGG	7 cut(s)	192, 304, 316, 393, 421, 433, 654
AgsI	TTSAA	1 cut(s)	334
AhdI	GACNNNNNGTC	1 cut(s)	52
AjiI	CACGTC	1 cut(s)	247
AjnI	CCWGG	2 cut(s)	167, 191
AjuI	GAANNNNNNNTTGG	2 cut(s)	245, 277
AleI	CACNNNNGTG	1 cut(s)	1147
AluBI	AGCT	6 cut(s)	178, 256, 712, 817, 1194, 1223
AluI	AGCT	6 cut(s)	178, 256, 712, 817, 1194, 1223
Alw21I	GWGCWC	1 cut(s)	87
Alw26I	GTCTC	4 cut(s)	126, 370, 879, 1173
AlwI	GGATC	2 cut(s)	571, 920
Aor13HI	TCCGGA	1 cut(s)	694
ApaI	GGGCCC	1 cut(s)	298
ApeKI	GCWGC	2 cut(s)	175, 817
ApoI	RAATTY	2 cut(s)	1073, 1097
Asp700I	GAANNNNTTC	1 cut(s)	1073
AspLEI	GCGC	4 cut(s)	122, 143, 219, 949
AsuC2I	CCSGG	3 cut(s)	293, 561, 1079
AsuHPI	GGTGA	3 cut(s)	271, 662, 1136
AvaII	GGWCC	5 cut(s)	188, 340, 424, 436, 893
BaeGI	GKGCMC	2 cut(s)	298, 772
BalI	TGGCCA	2 cut(s)	5, 113
BanI	GGYRCC	2 cut(s)	661, 767
BanII	GRGCYC	1 cut(s)	298
BarI	GAAGNNNNNNTAC	2 cut(s)	742, 774
Bbv12I	GWGCWC	1 cut(s)	87
BbvI	GCAGC	2 cut(s)	187, 804
BccI	CCATC	1 cut(s)	157
BceAI	ACGGC	4 cut(s)	103, 338, 414, 427
BciT130I	CCWGG	2 cut(s)	169, 193
BciVI	GTATCC	1 cut(s)	702
BclI	TGATCA	1 cut(s)	802
BcnI	CCSGG	3 cut(s)	293, 561, 1079
BcoDI	GTCTC	4 cut(s)	126, 370, 879, 1173
BfaI	CTAG	1 cut(s)	393
BfuAI	ACCTGC	1 cut(s)	940
BfuI	GTATCC	1 cut(s)	702
BglI	GCCNNNNNGGC	2 cut(s)	149, 293
BlpI	GCTNAGC	1 cut(s)	786
Bme1390I	CCNGG	5 cut(s)	169, 193, 293, 561, 1079
Bme18I	GGWCC	5 cut(s)	188, 340, 424, 436, 893
BmeRI	GACNNNNNGTC	1 cut(s)	52
BmgBI	CACGTC	1 cut(s)	247
BmiI	GGNNCC	5 cut(s)	190, 296, 415, 663, 769
BmrFI	CCNGG	5 cut(s)	169, 193, 293, 561, 1079
BmsI	GCATC	1 cut(s)	453
BoxI	GACNNNNGTC	2 cut(s)	362, 429
Bpu1102I	GCTNAGC	1 cut(s)	786
BpuEI	CTTGAG	2 cut(s)	755, 1021
BpuMI	CCSGG	3 cut(s)	293, 561, 1079
BsaHI	GRCGYC	3 cut(s)	135, 222, 285
BsaI	GGTCTC	1 cut(s)	1173
BsaJI	CCNNGG	3 cut(s)	147, 168, 191
BsaWI	WCCGGW	3 cut(s)	185, 654, 694
BsaXI	ACNNNNNCTCC	2 cut(s)	62, 92
Bsc4I	CCNNNNNNNGG	7 cut(s)	192, 304, 316, 393, 421, 433, 654
Bse118I	RCCGGY	5 cut(s)	382, 568, 601, 647, 664
Bse3DI	GCAATG	1 cut(s)	237
BseAI	TCCGGA	1 cut(s)	694
BseBI	CCWGG	2 cut(s)	169, 193
BseDI	CCNNGG	3 cut(s)	147, 168, 191
BseLI	CCNNNNNNNGG	7 cut(s)	192, 304, 316, 393, 421, 433, 654
BseMI	GCAATG	1 cut(s)	237
BseMII	CTCAG	2 cut(s)	264, 800
BseRI	GAGGAG	2 cut(s)	56, 302
BseSI	GKGCMC	2 cut(s)	298, 772
BseX3I	CGGCCG	1 cut(s)	384
BseXI	GCAGC	2 cut(s)	187, 804
BseYI	CCCAGC	1 cut(s)	899
BsgI	GTGCAG	1 cut(s)	1106
Bsh1236I	CGCG	5 cut(s)	120, 141, 159, 219, 947
Bsh1285I	CGRYCG	1 cut(s)	387
BshNI	GGYRCC	2 cut(s)	661, 767
BsiEI	CGRYCG	1 cut(s)	387
BsiHKAI	GWGCWC	1 cut(s)	87
BslFI	GGGAC	2 cut(s)	174, 916
BslI	CCNNNNNNNGG	7 cut(s)	192, 304, 316, 393, 421, 433, 654
BsmAI	GTCTC	4 cut(s)	126, 370, 879, 1173
BsmBI	CGTCTC	1 cut(s)	126
BsmFI	GGGAC	2 cut(s)	174, 916
Bso31I	GGTCTC	1 cut(s)	1173
Bsp120I	GGGCCC	1 cut(s)	294
Bsp1286I	GDGCHC	3 cut(s)	87, 298, 772
Bsp13I	TCCGGA	1 cut(s)	694
Bsp143I	GATC	4 cut(s)	563, 802, 925, 1048
Bsp1720I	GCTNAGC	1 cut(s)	786
Bsp68I	TCGCGA	1 cut(s)	159
BspCNI	CTCAG	2 cut(s)	265, 799
BspEI	TCCGGA	1 cut(s)	694
BspFNI	CGCG	5 cut(s)	120, 141, 159, 219, 947
BspLI	GGNNCC	5 cut(s)	190, 296, 415, 663, 769
BspMI	ACCTGC	1 cut(s)	940
BspPI	GGATC	2 cut(s)	571, 920
BspT107I	GGYRCC	2 cut(s)	661, 767
BspTNI	GGTCTC	1 cut(s)	1173
BsrBI	CCGCTC	1 cut(s)	155
BsrDI	GCAATG	1 cut(s)	237
BsrFI	RCCGGY	5 cut(s)	382, 568, 601, 647, 664
BssAI	RCCGGY	5 cut(s)	382, 568, 601, 647, 664
BssECI	CCNNGG	3 cut(s)	147, 168, 191
BssMI	GATC	4 cut(s)	563, 802, 925, 1048
BssNI	GRCGYC	3 cut(s)	135, 222, 285
Bst2UI	CCWGG	2 cut(s)	169, 193
Bst4CI	ACNGT	4 cut(s)	505, 661, 907, 1217
Bst6I	CTCTTC	1 cut(s)	763
BstACI	GRCGYC	3 cut(s)	135, 222, 285
BstAPI	GCANNNNNTGC	1 cut(s)	1162
BstC8I	GCNNGC	4 cut(s)	157, 238, 326, 603
BstDEI	CTNAG	3 cut(s)	273, 786, 1093
BstEII	GGTNACC	1 cut(s)	650
BstFNI	CGCG	5 cut(s)	120, 141, 159, 219, 947
BstHHI	GCGC	4 cut(s)	122, 143, 219, 949
BstKTI	GATC	4 cut(s)	566, 805, 928, 1051
BstMAI	GTCTC	4 cut(s)	126, 370, 879, 1173
BstMBI	GATC	4 cut(s)	563, 802, 925, 1048
BstMCI	CGRYCG	1 cut(s)	387
BstMWI	GCNNNNNNNGC	5 cut(s)	119, 149, 152, 293, 1162
BstNI	CCWGG	2 cut(s)	169, 193
BstNSI	RCATGY	1 cut(s)	1132
BstPAI	GACNNNNGTC	2 cut(s)	362, 429
BstPI	GGTNACC	1 cut(s)	650
BstSCI	CCNGG	5 cut(s)	167, 191, 291, 559, 1077
BstSLI	GKGCMC	2 cut(s)	298, 772
BstUI	CGCG	5 cut(s)	120, 141, 159, 219, 947
BstV1I	GCAGC	2 cut(s)	187, 804
BstXI	CCANNNNNNTGG	2 cut(s)	1149, 1152
BstZI	CGGCCG	1 cut(s)	384
BsuI	GTATCC	1 cut(s)	702
BtrI	CACGTC	1 cut(s)	247
BtuMI	TCGCGA	1 cut(s)	159
BveI	ACCTGC	1 cut(s)	940
Cac8I	GCNNGC	4 cut(s)	157, 238, 326, 603
CfoI	GCGC	4 cut(s)	122, 143, 219, 949
Cfr10I	RCCGGY	5 cut(s)	382, 568, 601, 647, 664
CseI	GACGC	2 cut(s)	230, 293
CviAII	CATG	7 cut(s)	109, 304, 316, 625, 923, 1024, 1129
DdeI	CTNAG	3 cut(s)	273, 786, 1093
DpnI	GATC	4 cut(s)	565, 804, 927, 1050
DpnII	GATC	4 cut(s)	563, 802, 925, 1048
DraIII	CACNNNGTG	1 cut(s)	1162
DriI	GACNNNNNGTC	1 cut(s)	52
EaeI	YGGCCR	5 cut(s)	3, 111, 384, 599, 645
EagI	CGGCCG	1 cut(s)	384
Eam1104I	CTCTTC	1 cut(s)	763
Eam1105I	GACNNNNNGTC	1 cut(s)	52
EarI	CTCTTC	1 cut(s)	763
EclXI	CGGCCG	1 cut(s)	384
Eco24I	GRGCYC	1 cut(s)	298
Eco31I	GGTCTC	1 cut(s)	1173
Eco47I	GGWCC	5 cut(s)	188, 340, 424, 436, 893
Eco52I	CGGCCG	1 cut(s)	384
Eco91I	GGTNACC	1 cut(s)	650
EcoO109I	RGGNCCY	1 cut(s)	295
EcoO65I	GGTNACC	1 cut(s)	650
EcoRI	GAATTC	1 cut(s)	1073
EcoRII	CCWGG	2 cut(s)	167, 191
EcoT38I	GRGCYC	1 cut(s)	298
Esp3I	CGTCTC	1 cut(s)	126
FaeI	CATG	7 cut(s)	112, 307, 319, 628, 926, 1027, 1132
FalI	AAGNNNNNCTT	2 cut(s)	245, 277
FaqI	GGGAC	2 cut(s)	174, 916
FatI	CATG	7 cut(s)	108, 303, 315, 624, 922, 1023, 1128
FauI	CCCGC	1 cut(s)	333
FauNDI	CATATG	1 cut(s)	830
FbaI	TGATCA	1 cut(s)	802
FriOI	GRGCYC	1 cut(s)	298
FspBI	CTAG	1 cut(s)	393
GlaI	GCGC	4 cut(s)	121, 142, 218, 948
GsaI	CCCAGC	1 cut(s)	903
HgaI	GACGC	2 cut(s)	230, 293
HhaI	GCGC	4 cut(s)	122, 143, 219, 949
Hin1I	GRCGYC	3 cut(s)	135, 222, 285
Hin1II	CATG	7 cut(s)	112, 307, 319, 628, 926, 1027, 1132
Hin6I	GCGC	4 cut(s)	120, 141, 217, 947
HinP1I	GCGC	4 cut(s)	120, 141, 217, 947
HinfI	GANTC	4 cut(s)	47, 53, 742, 755
HphI	GGTGA	3 cut(s)	271, 662, 1136
Hpy166II	GTNNAC	1 cut(s)	279
Hpy188I	TCNGA	7 cut(s)	13, 52, 82, 340, 807, 997, 1173
Hpy188III	TCNNGA	9 cut(s)	158, 378, 443, 695, 734, 839, 1052, 1103, 1230
Hpy8I	GTNNAC	1 cut(s)	279
Hpy99I	CGWCG	4 cut(s)	224, 251, 287, 778
HpyAV	CCTTC	2 cut(s)	527, 1115
HpyCH4III	ACNGT	4 cut(s)	505, 661, 907, 1217
HpyCH4IV	ACGT	6 cut(s)	102, 135, 246, 719, 776, 1226
HpyCH4V	TGCA	3 cut(s)	1032, 1087, 1110
HpyF10VI	GCNNNNNNNGC	5 cut(s)	119, 149, 152, 293, 1162
HpyF3I	CTNAG	3 cut(s)	273, 786, 1093
HpySE526I	ACGT	6 cut(s)	102, 135, 246, 719, 776, 1226
Hsp92I	GRCGYC	3 cut(s)	135, 222, 285
Hsp92II	CATG	7 cut(s)	112, 307, 319, 628, 926, 1027, 1132
HspAI	GCGC	4 cut(s)	120, 141, 217, 947
Kpn2I	TCCGGA	1 cut(s)	694
KroI	GCCGGC	1 cut(s)	601
KroNI	GCCGGC	1 cut(s)	603
Ksp22I	TGATCA	1 cut(s)	802
Kzo9I	GATC	4 cut(s)	563, 802, 925, 1048
LmnI	GCTCC	5 cut(s)	69, 172, 183, 261, 709
Lsp1109I	GCAGC	2 cut(s)	187, 804
LweI	GCATC	1 cut(s)	453
MaeI	CTAG	1 cut(s)	393
MaeII	ACGT	6 cut(s)	102, 135, 246, 719, 776, 1226
MaeIII	GTNAC	5 cut(s)	355, 440, 650, 907, 1124
MalI	GATC	4 cut(s)	565, 804, 927, 1050
MbiI	CCGCTC	1 cut(s)	155
MboI	GATC	4 cut(s)	563, 802, 925, 1048
MboII	GAAGA	2 cut(s)	523, 750
MhlI	GDGCHC	3 cut(s)	87, 298, 772
MlsI	TGGCCA	2 cut(s)	5, 113
MluCI	AATT	4 cut(s)	418, 682, 1073, 1097
MluNI	TGGCCA	2 cut(s)	5, 113
MlyI	GAGTC	3 cut(s)	41, 62, 749
MmeI	TCCRAC	2 cut(s)	36, 937
Mox20I	TGGCCA	2 cut(s)	5, 113
MroI	TCCGGA	1 cut(s)	694
MroNI	GCCGGC	1 cut(s)	601
MroXI	GAANNNNTTC	1 cut(s)	1073
MscI	TGGCCA	2 cut(s)	5, 113
MseI	TTAA	1 cut(s)	542
MslI	CAYNNNNRTG	2 cut(s)	936, 1147
Msp20I	TGGCCA	2 cut(s)	5, 113
MspA1I	CMGCKG	1 cut(s)	272
MspR9I	CCNGG	5 cut(s)	169, 193, 293, 561, 1079
MvaI	CCWGG	2 cut(s)	169, 193
MvnI	CGCG	5 cut(s)	120, 141, 159, 219, 947
MwoI	GCNNNNNNNGC	5 cut(s)	119, 149, 152, 293, 1162
NaeI	GCCGGC	1 cut(s)	603
NciI	CCSGG	3 cut(s)	293, 561, 1079
NdeI	CATATG	1 cut(s)	830
NdeII	GATC	4 cut(s)	563, 802, 925, 1048
NgoMIV	GCCGGC	1 cut(s)	601
NlaIII	CATG	7 cut(s)	112, 307, 319, 628, 926, 1027, 1132
NlaIV	GGNNCC	5 cut(s)	190, 296, 415, 663, 769
NmeAIII	GCCGAG	1 cut(s)	172
NmuCI	GTSAC	4 cut(s)	355, 440, 650, 1124
NruI	TCGCGA	1 cut(s)	159
NspI	RCATGY	1 cut(s)	1132
OliI	CACNNNNGTG	1 cut(s)	1147
PdiI	GCCGGC	1 cut(s)	603
PdmI	GAANNNNTTC	1 cut(s)	1073
PfeI	GAWTC	1 cut(s)	742
PfoI	TCCNGGA	1 cut(s)	1077
PleI	GAGTC	3 cut(s)	41, 61, 749
PpsI	GAGTC	3 cut(s)	41, 61, 749
PshAI	GACNNNNGTC	2 cut(s)	362, 429
Psp6I	CCWGG	2 cut(s)	167, 191
PspEI	GGTNACC	1 cut(s)	650
PspFI	CCCAGC	1 cut(s)	899
PspGI	CCWGG	2 cut(s)	167, 191
PspN4I	GGNNCC	5 cut(s)	190, 296, 415, 663, 769
PspOMI	GGGCCC	1 cut(s)	294
PsrI	GAACNNNNNNTAC	2 cut(s)	540, 572
RruI	TCGCGA	1 cut(s)	159
RseI	CAYNNNNRTG	2 cut(s)	936, 1147
SaqAI	TTAA	1 cut(s)	542
Sau3AI	GATC	4 cut(s)	563, 802, 925, 1048
SchI	GAGTC	3 cut(s)	41, 62, 749
ScrFI	CCNGG	5 cut(s)	169, 193, 293, 561, 1079
SduI	GDGCHC	3 cut(s)	87, 298, 772
SfaNI	GCATC	1 cut(s)	453
SinI	GGWCC	5 cut(s)	188, 340, 424, 436, 893
SmiMI	CAYNNNNRTG	2 cut(s)	936, 1147
SmlI	CTYRAG	2 cut(s)	734, 1036
SmoI	CTYRAG	2 cut(s)	734, 1036
Sse9I	AATT	4 cut(s)	418, 682, 1073, 1097
SspMI	CTAG	1 cut(s)	393
StyD4I	CCNGG	5 cut(s)	167, 191, 291, 559, 1077
TaaI	ACNGT	4 cut(s)	505, 661, 907, 1217
TaiI	ACGT	6 cut(s)	105, 138, 249, 722, 779, 1229
TaqI	TCGA	2 cut(s)	45, 300
TasI	AATT	4 cut(s)	418, 682, 1073, 1097
TfiI	GAWTC	1 cut(s)	742
Tru1I	TTAA	1 cut(s)	542
Tru9I	TTAA	1 cut(s)	542
TseFI	GTSAC	4 cut(s)	355, 440, 650, 1124
TseI	GCWGC	2 cut(s)	175, 817
Tsp45I	GTSAC	4 cut(s)	355, 440, 650, 1124
TspDTI	ATGAA	1 cut(s)	978
TspGWI	ACGGA	3 cut(s)	190, 428, 473
VpaK11BI	GGWCC	5 cut(s)	188, 340, 424, 436, 893
XapI	RAATTY	2 cut(s)	1073, 1097
XceI	RCATGY	1 cut(s)	1132
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1149
XmnI	GAANNNNTTC	1 cut(s)	1073
XspI	CTAG	1 cut(s)	393
ZraI	GACGTC	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.