lysine-specific demethylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20810 AT3G20810 AT3G20810 AT3G20810 AT3G20810 |
| fragaria_vesca | FvH4_3g43600 |
| malus_domestica | MD03G1020700.v1.1 MD11G1022300.v1.1 |
| prunus_persica | Prupe.6G015700_v2.0.a1 |
| pyrus_communis | pycom03g01760 pycom11g01790 |
| rosa_chinensis | RchiOBHm_Chr5g0078171 RchiOBHm_Chr5g0078191 RchiOBHm_Chr5g0078281 RchiOBHm_Chr5g0078291 |
| rosa_laevigata | RLG00000036759 RLG00000036763 |
| rosa_multiflora | Rmu_sc0000631.1_g000035 Rmu_sc0005194.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00003960 |
| rosa_rugosa | Rorug03G0196500 Rorug05G0459500.1 Rorug05G0459800 |
| rosa_samantha | Rh5AG513800 Rh5BG536800 Rh5CG560200 Rh5DG548400 Rh6BG257500 |
| rosa_wichuraiana | Rw5G047680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 165 |
| AccB1I | GGYRCC | 1 cut(s) | 685 |
| AccBSI | CCGCTC | 2 cut(s) | 182, 355 |
| AccII | CGCG | 5 cut(s) | 147, 173, 186, 246, 321 |
| AccIII | TCCGGA | 1 cut(s) | 718 |
| AclWI | GGATC | 2 cut(s) | 595, 944 |
| AcoI | YGGCCR | 4 cut(s) | 3, 138, 276, 623 |
| AcsI | RAATTY | 2 cut(s) | 1097, 1121 |
| AcvI | CACGTG | 1 cut(s) | 274 |
| AcyI | GRCGYC | 3 cut(s) | 162, 249, 312 |
| AdeI | CACNNNGTG | 1 cut(s) | 1186 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 172, 219, 274, 331, 343, 417, 445, 457, 678 |
| AgsI | TTSAA | 1 cut(s) | 361 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 79 |
| AjnI | CCWGG | 2 cut(s) | 194, 218 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 272, 304 |
| AluBI | AGCT | 5 cut(s) | 205, 283, 736, 1218, 1247 |
| AluI | AGCT | 5 cut(s) | 205, 283, 736, 1218, 1247 |
| Alw21I | GWGCWC | 1 cut(s) | 114 |
| Alw26I | GTCTC | 3 cut(s) | 397, 903, 1197 |
| AlwI | GGATC | 2 cut(s) | 595, 944 |
| Aor13HI | TCCGGA | 1 cut(s) | 718 |
| ApeKI | GCWGC | 1 cut(s) | 202 |
| ApoI | RAATTY | 2 cut(s) | 1097, 1121 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1097 |
| AspLEI | GCGC | 4 cut(s) | 149, 246, 323, 796 |
| AspS9I | GGNCC | 9 cut(s) | 168, 215, 334, 350, 367, 437, 448, 460, 917 |
| AsuC2I | CCSGG | 3 cut(s) | 167, 585, 1103 |
| AsuHPI | GGTGA | 3 cut(s) | 298, 686, 1160 |
| AvaII | GGWCC | 4 cut(s) | 367, 448, 460, 917 |
| BalI | TGGCCA | 3 cut(s) | 5, 140, 278 |
| BanI | GGYRCC | 1 cut(s) | 685 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 766, 798 |
| BbrPI | CACGTG | 1 cut(s) | 274 |
| Bbv12I | GWGCWC | 1 cut(s) | 114 |
| BbvI | GCAGC | 1 cut(s) | 214 |
| BccI | CCATC | 1 cut(s) | 184 |
| BceAI | ACGGC | 4 cut(s) | 130, 365, 438, 451 |
| BciT130I | CCWGG | 2 cut(s) | 196, 220 |
| BciVI | GTATCC | 1 cut(s) | 726 |
| BclI | TGATCA | 1 cut(s) | 826 |
| BcnI | CCSGG | 3 cut(s) | 167, 585, 1103 |
| BcoDI | GTCTC | 3 cut(s) | 397, 903, 1197 |
| BfaI | CTAG | 1 cut(s) | 417 |
| BfuI | GTATCC | 1 cut(s) | 726 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 176 |
| BlpI | GCTNAGC | 1 cut(s) | 810 |
| Bme1390I | CCNGG | 5 cut(s) | 167, 196, 220, 585, 1103 |
| Bme18I | GGWCC | 4 cut(s) | 367, 448, 460, 917 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 79 |
| BmgT120I | GGNCC | 9 cut(s) | 168, 215, 334, 350, 367, 437, 448, 460, 917 |
| BmiI | GGNNCC | 3 cut(s) | 217, 439, 687 |
| BmrFI | CCNGG | 5 cut(s) | 167, 196, 220, 585, 1103 |
| BmrI | ACTGGG | 1 cut(s) | 230 |
| BmuI | ACTGGG | 1 cut(s) | 230 |
| BoxI | GACNNNNGTC | 2 cut(s) | 389, 453 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 810 |
| BpuEI | CTTGAG | 2 cut(s) | 779, 1045 |
| BpuMI | CCSGG | 3 cut(s) | 167, 585, 1103 |
| BsaAI | YACGTR | 1 cut(s) | 274 |
| BsaHI | GRCGYC | 3 cut(s) | 162, 249, 312 |
| BsaI | GGTCTC | 1 cut(s) | 1197 |
| BsaJI | CCNNGG | 3 cut(s) | 171, 195, 218 |
| BsaWI | WCCGGW | 2 cut(s) | 678, 718 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 89, 119, 359, 389 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 172, 219, 274, 331, 343, 417, 445, 457, 678 |
| Bse118I | RCCGGY | 5 cut(s) | 155, 592, 625, 671, 688 |
| Bse1I | ACTGG | 1 cut(s) | 236 |
| Bse3DI | GCAATG | 1 cut(s) | 264 |
| BseAI | TCCGGA | 1 cut(s) | 718 |
| BseBI | CCWGG | 2 cut(s) | 196, 220 |
| BseDI | CCNNGG | 3 cut(s) | 171, 195, 218 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 172, 219, 274, 331, 343, 417, 445, 457, 678 |
| BseMI | GCAATG | 1 cut(s) | 264 |
| BseMII | CTCAG | 2 cut(s) | 291, 824 |
| BseNI | ACTGG | 1 cut(s) | 236 |
| BseRI | GAGGAG | 2 cut(s) | 83, 329 |
| BseXI | GCAGC | 1 cut(s) | 214 |
| BseYI | CCCAGC | 1 cut(s) | 923 |
| BsgI | GTGCAG | 1 cut(s) | 1130 |
| Bsh1236I | CGCG | 5 cut(s) | 147, 173, 186, 246, 321 |
| BshNI | GGYRCC | 1 cut(s) | 685 |
| BsiHKAI | GWGCWC | 1 cut(s) | 114 |
| BslFI | GGGAC | 1 cut(s) | 940 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 172, 219, 274, 331, 343, 417, 445, 457, 678 |
| BsmAI | GTCTC | 3 cut(s) | 397, 903, 1197 |
| BsmFI | GGGAC | 1 cut(s) | 940 |
| Bso31I | GGTCTC | 1 cut(s) | 1197 |
| Bsp1286I | GDGCHC | 1 cut(s) | 114 |
| Bsp13I | TCCGGA | 1 cut(s) | 718 |
| Bsp143I | GATC | 4 cut(s) | 587, 826, 949, 1072 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 810 |
| Bsp68I | TCGCGA | 1 cut(s) | 186 |
| BspCNI | CTCAG | 2 cut(s) | 292, 823 |
| BspEI | TCCGGA | 1 cut(s) | 718 |
| BspFNI | CGCG | 5 cut(s) | 147, 173, 186, 246, 321 |
| BspLI | GGNNCC | 3 cut(s) | 217, 439, 687 |
| BspPI | GGATC | 2 cut(s) | 595, 944 |
| BspQI | GCTCTTC | 1 cut(s) | 362 |
| BspT107I | GGYRCC | 1 cut(s) | 685 |
| BspTNI | GGTCTC | 1 cut(s) | 1197 |
| BsrBI | CCGCTC | 2 cut(s) | 182, 355 |
| BsrDI | GCAATG | 1 cut(s) | 264 |
| BsrFI | RCCGGY | 5 cut(s) | 155, 592, 625, 671, 688 |
| BsrI | ACTGG | 1 cut(s) | 236 |
| BssAI | RCCGGY | 5 cut(s) | 155, 592, 625, 671, 688 |
| BssECI | CCNNGG | 3 cut(s) | 171, 195, 218 |
| BssMI | GATC | 4 cut(s) | 587, 826, 949, 1072 |
| BssNI | GRCGYC | 3 cut(s) | 162, 249, 312 |
| Bst2UI | CCWGG | 2 cut(s) | 196, 220 |
| Bst4CI | ACNGT | 4 cut(s) | 529, 685, 931, 1241 |
| Bst6I | CTCTTC | 1 cut(s) | 362 |
| BstACI | GRCGYC | 3 cut(s) | 162, 249, 312 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1186 |
| BstBAI | YACGTR | 1 cut(s) | 274 |
| BstC8I | GCNNGC | 5 cut(s) | 157, 184, 265, 353, 627 |
| BstDEI | CTNAG | 3 cut(s) | 300, 810, 1117 |
| BstDSI | CCRYGG | 1 cut(s) | 171 |
| BstEII | GGTNACC | 1 cut(s) | 674 |
| BstFNI | CGCG | 5 cut(s) | 147, 173, 186, 246, 321 |
| BstHHI | GCGC | 4 cut(s) | 149, 246, 323, 796 |
| BstKTI | GATC | 4 cut(s) | 590, 829, 952, 1075 |
| BstMAI | GTCTC | 3 cut(s) | 397, 903, 1197 |
| BstMBI | GATC | 4 cut(s) | 587, 826, 949, 1072 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 146, 176, 179, 320, 1186 |
| BstNI | CCWGG | 2 cut(s) | 196, 220 |
| BstNSI | RCATGY | 1 cut(s) | 1156 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 389, 453 |
| BstPI | GGTNACC | 1 cut(s) | 674 |
| BstSCI | CCNGG | 5 cut(s) | 165, 194, 218, 583, 1101 |
| BstUI | CGCG | 5 cut(s) | 147, 173, 186, 246, 321 |
| BstV1I | GCAGC | 1 cut(s) | 214 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1176 |
| BsuI | GTATCC | 1 cut(s) | 726 |
| BtgI | CCRYGG | 1 cut(s) | 171 |
| BtuMI | TCGCGA | 1 cut(s) | 186 |
| Cac8I | GCNNGC | 5 cut(s) | 157, 184, 265, 353, 627 |
| CfoI | GCGC | 4 cut(s) | 149, 246, 323, 796 |
| Cfr10I | RCCGGY | 5 cut(s) | 155, 592, 625, 671, 688 |
| Cfr13I | GGNCC | 9 cut(s) | 168, 215, 334, 350, 367, 437, 448, 460, 917 |
| Cfr42I | CCGCGG | 1 cut(s) | 174 |
| CseI | GACGC | 2 cut(s) | 257, 320 |
| CviAII | CATG | 7 cut(s) | 136, 331, 343, 649, 947, 1048, 1153 |
| DdeI | CTNAG | 3 cut(s) | 300, 810, 1117 |
| DpnI | GATC | 4 cut(s) | 589, 828, 951, 1074 |
| DpnII | GATC | 4 cut(s) | 587, 826, 949, 1072 |
| DraIII | CACNNNGTG | 1 cut(s) | 1186 |
| DriI | GACNNNNNGTC | 1 cut(s) | 79 |
| EaeI | YGGCCR | 4 cut(s) | 3, 138, 276, 623 |
| Eam1104I | CTCTTC | 1 cut(s) | 362 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 79 |
| EarI | CTCTTC | 1 cut(s) | 362 |
| EciI | GGCGGA | 1 cut(s) | 367 |
| Eco31I | GGTCTC | 1 cut(s) | 1197 |
| Eco47I | GGWCC | 4 cut(s) | 367, 448, 460, 917 |
| Eco72I | CACGTG | 1 cut(s) | 274 |
| Eco91I | GGTNACC | 1 cut(s) | 674 |
| EcoO65I | GGTNACC | 1 cut(s) | 674 |
| EcoRI | GAATTC | 1 cut(s) | 1097 |
| EcoRII | CCWGG | 2 cut(s) | 194, 218 |
| FaeI | CATG | 7 cut(s) | 139, 334, 346, 652, 950, 1051, 1156 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 272, 304 |
| FaqI | GGGAC | 1 cut(s) | 940 |
| FatI | CATG | 7 cut(s) | 135, 330, 342, 648, 946, 1047, 1152 |
| FauI | CCCGC | 2 cut(s) | 360, 1173 |
| FauNDI | CATATG | 1 cut(s) | 854 |
| FbaI | TGATCA | 1 cut(s) | 826 |
| FspBI | CTAG | 1 cut(s) | 417 |
| GlaI | GCGC | 4 cut(s) | 148, 245, 322, 795 |
| GsaI | CCCAGC | 1 cut(s) | 927 |
| HgaI | GACGC | 2 cut(s) | 257, 320 |
| HhaI | GCGC | 4 cut(s) | 149, 246, 323, 796 |
| Hin1I | GRCGYC | 3 cut(s) | 162, 249, 312 |
| Hin1II | CATG | 7 cut(s) | 139, 334, 346, 652, 950, 1051, 1156 |
| Hin6I | GCGC | 4 cut(s) | 147, 244, 321, 794 |
| HinP1I | GCGC | 4 cut(s) | 147, 244, 321, 794 |
| HinfI | GANTC | 4 cut(s) | 74, 80, 766, 779 |
| HphI | GGTGA | 3 cut(s) | 298, 686, 1160 |
| Hpy166II | GTNNAC | 1 cut(s) | 306 |
| Hpy188I | TCNGA | 8 cut(s) | 13, 79, 109, 367, 427, 831, 1021, 1197 |
| Hpy188III | TCNNGA | 8 cut(s) | 185, 405, 719, 758, 863, 1076, 1127, 1254 |
| Hpy8I | GTNNAC | 1 cut(s) | 306 |
| Hpy99I | CGWCG | 3 cut(s) | 164, 251, 314 |
| HpyAV | CCTTC | 2 cut(s) | 551, 1139 |
| HpyCH4III | ACNGT | 4 cut(s) | 529, 685, 931, 1241 |
| HpyCH4IV | ACGT | 4 cut(s) | 129, 162, 273, 743 |
| HpyCH4V | TGCA | 5 cut(s) | 522, 971, 1056, 1111, 1134 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 146, 176, 179, 320, 1186 |
| HpyF3I | CTNAG | 3 cut(s) | 300, 810, 1117 |
| HpySE526I | ACGT | 4 cut(s) | 129, 162, 273, 743 |
| Hsp92I | GRCGYC | 3 cut(s) | 162, 249, 312 |
| Hsp92II | CATG | 7 cut(s) | 139, 334, 346, 652, 950, 1051, 1156 |
| HspAI | GCGC | 4 cut(s) | 147, 244, 321, 794 |
| Kpn2I | TCCGGA | 1 cut(s) | 718 |
| KroI | GCCGGC | 2 cut(s) | 155, 625 |
| KroNI | GCCGGC | 2 cut(s) | 157, 627 |
| Ksp22I | TGATCA | 1 cut(s) | 826 |
| KspI | CCGCGG | 1 cut(s) | 174 |
| Kzo9I | GATC | 4 cut(s) | 587, 826, 949, 1072 |
| LguI | GCTCTTC | 1 cut(s) | 362 |
| LmnI | GCTCC | 5 cut(s) | 96, 199, 210, 288, 733 |
| Lsp1109I | GCAGC | 1 cut(s) | 214 |
| MaeI | CTAG | 1 cut(s) | 417 |
| MaeII | ACGT | 4 cut(s) | 129, 162, 273, 743 |
| MaeIII | GTNAC | 5 cut(s) | 382, 464, 674, 931, 1148 |
| MalI | GATC | 4 cut(s) | 589, 828, 951, 1074 |
| MbiI | CCGCTC | 2 cut(s) | 182, 355 |
| MboI | GATC | 4 cut(s) | 587, 826, 949, 1072 |
| MboII | GAAGA | 3 cut(s) | 349, 547, 774 |
| MhlI | GDGCHC | 1 cut(s) | 114 |
| MlsI | TGGCCA | 3 cut(s) | 5, 140, 278 |
| MluCI | AATT | 4 cut(s) | 443, 706, 1097, 1121 |
| MluNI | TGGCCA | 3 cut(s) | 5, 140, 278 |
| MlyI | GAGTC | 2 cut(s) | 68, 89 |
| MmeI | TCCRAC | 2 cut(s) | 36, 961 |
| Mox20I | TGGCCA | 3 cut(s) | 5, 140, 278 |
| MreI | CGCCGGCG | 1 cut(s) | 155 |
| MroI | TCCGGA | 1 cut(s) | 718 |
| MroNI | GCCGGC | 2 cut(s) | 155, 625 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1097 |
| MscI | TGGCCA | 3 cut(s) | 5, 140, 278 |
| MseI | TTAA | 1 cut(s) | 566 |
| MslI | CAYNNNNRTG | 1 cut(s) | 960 |
| Msp20I | TGGCCA | 3 cut(s) | 5, 140, 278 |
| MspA1I | CMGCKG | 2 cut(s) | 173, 299 |
| MspR9I | CCNGG | 5 cut(s) | 167, 196, 220, 585, 1103 |
| MvaI | CCWGG | 2 cut(s) | 196, 220 |
| MvnI | CGCG | 5 cut(s) | 147, 173, 186, 246, 321 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 146, 176, 179, 320, 1186 |
| NaeI | GCCGGC | 2 cut(s) | 157, 627 |
| NciI | CCSGG | 3 cut(s) | 167, 585, 1103 |
| NdeI | CATATG | 1 cut(s) | 854 |
| NdeII | GATC | 4 cut(s) | 587, 826, 949, 1072 |
| NgoMIV | GCCGGC | 2 cut(s) | 155, 625 |
| NlaIII | CATG | 7 cut(s) | 139, 334, 346, 652, 950, 1051, 1156 |
| NlaIV | GGNNCC | 3 cut(s) | 217, 439, 687 |
| NmuCI | GTSAC | 4 cut(s) | 382, 464, 674, 1148 |
| NruI | TCGCGA | 1 cut(s) | 186 |
| NspI | RCATGY | 1 cut(s) | 1156 |
| PciSI | GCTCTTC | 1 cut(s) | 362 |
| PdiI | GCCGGC | 2 cut(s) | 157, 627 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1097 |
| PfeI | GAWTC | 2 cut(s) | 766, 779 |
| PfoI | TCCNGGA | 1 cut(s) | 1101 |
| PleI | GAGTC | 2 cut(s) | 68, 88 |
| PmaCI | CACGTG | 1 cut(s) | 274 |
| PmlI | CACGTG | 1 cut(s) | 274 |
| PpsI | GAGTC | 2 cut(s) | 68, 88 |
| Ppu21I | YACGTR | 1 cut(s) | 274 |
| PshAI | GACNNNNGTC | 2 cut(s) | 389, 453 |
| Psp6I | CCWGG | 2 cut(s) | 194, 218 |
| PspCI | CACGTG | 1 cut(s) | 274 |
| PspEI | GGTNACC | 1 cut(s) | 674 |
| PspFI | CCCAGC | 1 cut(s) | 923 |
| PspGI | CCWGG | 2 cut(s) | 194, 218 |
| PspN4I | GGNNCC | 3 cut(s) | 217, 439, 687 |
| PspPI | GGNCC | 9 cut(s) | 168, 215, 334, 350, 367, 437, 448, 460, 917 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 564, 596 |
| RruI | TCGCGA | 1 cut(s) | 186 |
| RseI | CAYNNNNRTG | 1 cut(s) | 960 |
| SacII | CCGCGG | 1 cut(s) | 174 |
| SapI | GCTCTTC | 1 cut(s) | 362 |
| SaqAI | TTAA | 1 cut(s) | 566 |
| Sau3AI | GATC | 4 cut(s) | 587, 826, 949, 1072 |
| Sau96I | GGNCC | 9 cut(s) | 168, 215, 334, 350, 367, 437, 448, 460, 917 |
| SchI | GAGTC | 2 cut(s) | 68, 89 |
| ScrFI | CCNGG | 5 cut(s) | 167, 196, 220, 585, 1103 |
| SduI | GDGCHC | 1 cut(s) | 114 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 176 |
| Sfr303I | CCGCGG | 1 cut(s) | 174 |
| SgrAI | CRCCGGYG | 1 cut(s) | 155 |
| SgrBI | CCGCGG | 1 cut(s) | 174 |
| SinI | GGWCC | 4 cut(s) | 367, 448, 460, 917 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 960 |
| SmlI | CTYRAG | 2 cut(s) | 758, 1060 |
| SmoI | CTYRAG | 2 cut(s) | 758, 1060 |
| Sse9I | AATT | 4 cut(s) | 443, 706, 1097, 1121 |
| SspMI | CTAG | 1 cut(s) | 417 |
| StyD4I | CCNGG | 5 cut(s) | 165, 194, 218, 583, 1101 |
| TaaI | ACNGT | 4 cut(s) | 529, 685, 931, 1241 |
| TaiI | ACGT | 4 cut(s) | 132, 165, 276, 746 |
| TaqI | TCGA | 2 cut(s) | 72, 327 |
| TasI | AATT | 4 cut(s) | 443, 706, 1097, 1121 |
| TfiI | GAWTC | 2 cut(s) | 766, 779 |
| Tru1I | TTAA | 1 cut(s) | 566 |
| Tru9I | TTAA | 1 cut(s) | 566 |
| TseFI | GTSAC | 4 cut(s) | 382, 464, 674, 1148 |
| TseI | GCWGC | 1 cut(s) | 202 |
| Tsp45I | GTSAC | 4 cut(s) | 382, 464, 674, 1148 |
| TspDTI | ATGAA | 2 cut(s) | 774, 1002 |
| TspGWI | ACGGA | 3 cut(s) | 217, 452, 497 |
| VpaK11BI | GGWCC | 4 cut(s) | 367, 448, 460, 917 |
| XapI | RAATTY | 2 cut(s) | 1097, 1121 |
| XceI | RCATGY | 1 cut(s) | 1156 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1097 |
| XspI | CTAG | 1 cut(s) | 417 |
| ZraI | GACGTC | 1 cut(s) | 163 |