Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005300

Physical Location & Seq

Genomic Coordinates Forward (+)

84351834 .. 84361953

Gene Structure 10120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG548400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1242 bp

ATGGCCAACTCCGACCACCACCACCACCACCACCTCCTCCCCACCCCGACCCTCGACTCCGAGTCCTCCACGCTCCTCCACACCCTCTCCGAGCACGGCGGCTACGCCTACGTCAGCATGGCCACACGCGCCGCCGCCGGCGACGTCCGGGCCGCGGAGGCCGCTCGCGAGATGGCCTGGGAGCAGCTCCACTCCGGCCCCTGGCACTCCGTCCTCCCCGTCTGGCGCGACGCCTACGCAATGGCCTGCCTCCACATCGCCAAGCTCCACTTCGCCGCCGCTGAGTTCACCGACGCCCTCCGCGCCCTCGACATGGGCCTCCTCATGGGCGGCCCGCTGTTCAAATCGGACCTCCACGCCGCCGTGACTAAAGTCTCCGCTAAATCCAGACCGGCCGCCGTTAGGGTTTCAGAACAAAACGGCCCCAATTTGGACCGCCGTCTGGTCCGTGACGACTTCAAAGCAACGGAGATGCTTGGGGTTTTGCCTCCAAAATCACTATCTTGTAAAACGGTTGTGAAGAAGTCTGGTCTATCTTTGGAAGGGTTTTTACGAGAACATTTCTTACCGGGATCGCCGGTTATTTTGACTGATTGTATGGCGCATTGGCCGGCGAGGGCGAAGTGGAATGACATGGATTACCTGACAAGAGTTGCCGGTGACCGGACGGTGCCGGTTGAGGTTGGGAAAAATTACTTGTATCCGGAGTGGAAGCAGGAGCTTATTACGTTTTCGCAGTTTCTTGAGAGGATTCGGGGTAATGACTCTTCCTCTGGCGCCCCGACGTATCTTGCTCAGCACTCATTGTTTGATCAGATAAACGAGCTGCGTGAGGACATATGTATTCCCGACTATTGTTGTGCTGGTGGTGGGGAACTAAGGTCTCTAAATGCTTGGTTTGGTCCGGCTGGGACTGTAACCCCATTACACCATGATCCGCACCATAATGTGTTTGCGCAGGTAGTTGGAAAAAAGTATATAAGGCTCTATTGTGCTTCATTGTCAAAGGAACTCTATCCACATACTGAAACCATGCTTTGCAACTCAAGTCAGGTTGATCTTGACAATGTAGATGAGAGAGAATTCCCGGAGGTGCAGGACTTAGAATTTCTTGACTGCATATTAGAGGAAGGTGAGATGCTTTATATCCCACCAAAGTGGTGGCACTATGTGCGGTCTCTGACAACAAGTATGTCAGTTAGCTTTTGGTGGAGTGATTATGACAGTTCAGCTACGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000086 GO:0000278 GO:0003674 GO:0003682 GO:0003700 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006807 GO:0006996 GO:0007049 GO:0007623 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008214 GO:0008276 GO:0008757 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010452 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016278 GO:0016279 GO:0016491 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016705 GO:0016706 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032259 GO:0032451 GO:0032452 GO:0034968 GO:0036211 GO:0042054 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0044839 GO:0045893 GO:0045935 GO:0046975 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051213 GO:0051252 GO:0051254 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:0140110 GO:1901564 GO:1902680 GO:1903047 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_8

Protein Analysis

413

Amino Acids

46.35

Weight (kDa)

5.78

Isoelectric Point (pI)

42.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_KDM8_N	PF24472	15 - 137	1.9e-62	KDM8-like, N-terminal ARM repeats
Cupin_8	PF13621	183 - 406	9.9e-49	Cupin-like domain
JmjC_2	PF08007	297 - 402	9.3e-10	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20810 AT3G20810 AT3G20810 AT3G20810 AT3G20810
fragaria_vesca	FvH4_3g43600
malus_domestica	MD03G1020700.v1.1 MD11G1022300.v1.1
prunus_persica	Prupe.6G015700_v2.0.a1
pyrus_communis	pycom03g01760 pycom11g01790
rosa_chinensis	RchiOBHm_Chr5g0078171 RchiOBHm_Chr5g0078191 RchiOBHm_Chr5g0078281 RchiOBHm_Chr5g0078291
rosa_laevigata	RLG00000036759 RLG00000036763
rosa_multiflora	Rmu_sc0000631.1_g000035 Rmu_sc0005194.1_g000006
rosa_roxburghii	Rroxscaffold_1G00003960
rosa_rugosa	Rorug03G0196500 Rorug05G0459500.1 Rorug05G0459800
rosa_samantha	Rh5AG513800 Rh5BG536800 Rh5CG560200 Rh5DG548400 Rh6BG257500
rosa_wichuraiana	Rw5G047680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	147
Acc16I	TGCGCA	1 cut(s)	957
Acc36I	ACCTGC	1 cut(s)	949
AccB1I	GGYRCC	2 cut(s)	670, 776
AccBSI	CCGCTC	1 cut(s)	164
AccII	CGCG	5 cut(s)	129, 155, 168, 228, 303
AccIII	TCCGGA	1 cut(s)	703
AclWI	GGATC	2 cut(s)	580, 929
AcoI	YGGCCR	4 cut(s)	3, 120, 393, 608
AcsI	RAATTY	2 cut(s)	1082, 1106
AcyI	GRCGYC	4 cut(s)	144, 231, 294, 777
AdeI	CACNNNGTG	1 cut(s)	1171
AfiI	CCNNNNNNNGG	8 cut(s)	154, 201, 313, 325, 402, 430, 442, 663
AgsI	TTSAA	2 cut(s)	343, 460
AhdI	GACNNNNNGTC	1 cut(s)	61
AjnI	CCWGG	2 cut(s)	176, 200
AjuI	GAANNNNNNNTTGG	2 cut(s)	254, 286
AleI	CACNNNNGTG	1 cut(s)	1156
AluBI	AGCT	6 cut(s)	187, 265, 721, 826, 1203, 1232
AluI	AGCT	6 cut(s)	187, 265, 721, 826, 1203, 1232
Alw21I	GWGCWC	1 cut(s)	96
Alw26I	GTCTC	3 cut(s)	379, 888, 1182
AlwI	GGATC	2 cut(s)	580, 929
Aor13HI	TCCGGA	1 cut(s)	703
ApeKI	GCWGC	2 cut(s)	184, 826
ApoI	RAATTY	2 cut(s)	1082, 1106
AspLEI	GCGC	6 cut(s)	131, 228, 305, 604, 779, 958
AspS9I	GGNCC	9 cut(s)	150, 197, 316, 332, 349, 422, 433, 445, 902
AsuC2I	CCSGG	3 cut(s)	149, 570, 1088
AsuHPI	GGTGA	3 cut(s)	280, 671, 1145
AvaII	GGWCC	4 cut(s)	349, 433, 445, 902
BalI	TGGCCA	2 cut(s)	5, 122
BanI	GGYRCC	2 cut(s)	670, 776
BarI	GAAGNNNNNNTAC	4 cut(s)	534, 566, 751, 783
Bbv12I	GWGCWC	1 cut(s)	96
BbvI	GCAGC	2 cut(s)	196, 813
BccI	CCATC	1 cut(s)	166
BceAI	ACGGC	5 cut(s)	112, 347, 383, 423, 436
BciT130I	CCWGG	2 cut(s)	178, 202
BciVI	GTATCC	1 cut(s)	711
BclI	TGATCA	1 cut(s)	811
BcnI	CCSGG	3 cut(s)	149, 570, 1088
BcoDI	GTCTC	3 cut(s)	379, 888, 1182
BfoI	RGCGCY	1 cut(s)	780
BfuAI	ACCTGC	1 cut(s)	949
BfuI	GTATCC	1 cut(s)	711
BglI	GCCNNNNNGGC	1 cut(s)	158
BlpI	GCTNAGC	1 cut(s)	795
Bme1390I	CCNGG	5 cut(s)	149, 178, 202, 570, 1088
Bme18I	GGWCC	4 cut(s)	349, 433, 445, 902
BmeRI	GACNNNNNGTC	1 cut(s)	61
BmgT120I	GGNCC	9 cut(s)	150, 197, 316, 332, 349, 422, 433, 445, 902
BmiI	GGNNCC	4 cut(s)	199, 424, 672, 778
BmrFI	CCNGG	5 cut(s)	149, 178, 202, 570, 1088
BmsI	GCATC	2 cut(s)	462, 1128
BoxI	GACNNNNGTC	2 cut(s)	371, 438
Bpu1102I	GCTNAGC	1 cut(s)	795
BpuEI	CTTGAG	2 cut(s)	764, 1030
BpuMI	CCSGG	3 cut(s)	149, 570, 1088
BsaHI	GRCGYC	4 cut(s)	144, 231, 294, 777
BsaI	GGTCTC	2 cut(s)	888, 1182
BsaJI	CCNNGG	3 cut(s)	153, 177, 200
BsaWI	WCCGGW	2 cut(s)	663, 703
BsaXI	ACNNNNNCTCC	2 cut(s)	71, 101
Bsc4I	CCNNNNNNNGG	8 cut(s)	154, 201, 313, 325, 402, 430, 442, 663
Bse118I	RCCGGY	6 cut(s)	137, 391, 577, 610, 656, 673
Bse3DI	GCAATG	1 cut(s)	246
BseAI	TCCGGA	1 cut(s)	703
BseBI	CCWGG	2 cut(s)	178, 202
BseDI	CCNNGG	3 cut(s)	153, 177, 200
BseLI	CCNNNNNNNGG	8 cut(s)	154, 201, 313, 325, 402, 430, 442, 663
BseMI	GCAATG	1 cut(s)	246
BseMII	CTCAG	2 cut(s)	273, 809
BseRI	GAGGAG	3 cut(s)	26, 65, 311
BseX3I	CGGCCG	1 cut(s)	393
BseXI	GCAGC	2 cut(s)	196, 813
BseYI	CCCAGC	1 cut(s)	908
BsgI	GTGCAG	1 cut(s)	1115
Bsh1236I	CGCG	5 cut(s)	129, 155, 168, 228, 303
Bsh1285I	CGRYCG	1 cut(s)	396
BshNI	GGYRCC	2 cut(s)	670, 776
BsiEI	CGRYCG	1 cut(s)	396
BsiHKAI	GWGCWC	1 cut(s)	96
BslFI	GGGAC	1 cut(s)	925
BslI	CCNNNNNNNGG	8 cut(s)	154, 201, 313, 325, 402, 430, 442, 663
BsmAI	GTCTC	3 cut(s)	379, 888, 1182
BsmFI	GGGAC	1 cut(s)	925
Bso31I	GGTCTC	2 cut(s)	888, 1182
Bsp1286I	GDGCHC	1 cut(s)	96
Bsp13I	TCCGGA	1 cut(s)	703
Bsp143I	GATC	4 cut(s)	572, 811, 934, 1057
Bsp1720I	GCTNAGC	1 cut(s)	795
Bsp68I	TCGCGA	1 cut(s)	168
BspCNI	CTCAG	2 cut(s)	274, 808
BspEI	TCCGGA	1 cut(s)	703
BspFNI	CGCG	5 cut(s)	129, 155, 168, 228, 303
BspLI	GGNNCC	4 cut(s)	199, 424, 672, 778
BspMI	ACCTGC	1 cut(s)	949
BspPI	GGATC	2 cut(s)	580, 929
BspT107I	GGYRCC	2 cut(s)	670, 776
BspTNI	GGTCTC	2 cut(s)	888, 1182
BsrBI	CCGCTC	1 cut(s)	164
BsrDI	GCAATG	1 cut(s)	246
BsrFI	RCCGGY	6 cut(s)	137, 391, 577, 610, 656, 673
BssAI	RCCGGY	6 cut(s)	137, 391, 577, 610, 656, 673
BssECI	CCNNGG	3 cut(s)	153, 177, 200
BssMI	GATC	4 cut(s)	572, 811, 934, 1057
BssNI	GRCGYC	4 cut(s)	144, 231, 294, 777
Bst2UI	CCWGG	2 cut(s)	178, 202
Bst4CI	ACNGT	4 cut(s)	514, 670, 916, 1226
Bst6I	CTCTTC	1 cut(s)	772
BstACI	GRCGYC	4 cut(s)	144, 231, 294, 777
BstAPI	GCANNNNNTGC	1 cut(s)	1171
BstC8I	GCNNGC	5 cut(s)	139, 166, 247, 335, 612
BstDEI	CTNAG	4 cut(s)	282, 795, 878, 1102
BstDSI	CCRYGG	1 cut(s)	153
BstEII	GGTNACC	1 cut(s)	659
BstFNI	CGCG	5 cut(s)	129, 155, 168, 228, 303
BstH2I	RGCGCY	1 cut(s)	780
BstHHI	GCGC	6 cut(s)	131, 228, 305, 604, 779, 958
BstKTI	GATC	4 cut(s)	575, 814, 937, 1060
BstMAI	GTCTC	3 cut(s)	379, 888, 1182
BstMBI	GATC	4 cut(s)	572, 811, 934, 1057
BstMCI	CGRYCG	1 cut(s)	396
BstMWI	GCNNNNNNNGC	5 cut(s)	128, 158, 161, 302, 1171
BstNI	CCWGG	2 cut(s)	178, 202
BstPAI	GACNNNNGTC	2 cut(s)	371, 438
BstPI	GGTNACC	1 cut(s)	659
BstSCI	CCNGG	5 cut(s)	147, 176, 200, 568, 1086
BstUI	CGCG	5 cut(s)	129, 155, 168, 228, 303
BstV1I	GCAGC	2 cut(s)	196, 813
BstXI	CCANNNNNNTGG	2 cut(s)	1158, 1161
BstZI	CGGCCG	1 cut(s)	393
BsuI	GTATCC	1 cut(s)	711
BtgI	CCRYGG	1 cut(s)	153
BtgZI	GCGATG	1 cut(s)	241
BtuMI	TCGCGA	1 cut(s)	168
BveI	ACCTGC	1 cut(s)	949
Cac8I	GCNNGC	5 cut(s)	139, 166, 247, 335, 612
CfoI	GCGC	6 cut(s)	131, 228, 305, 604, 779, 958
Cfr10I	RCCGGY	6 cut(s)	137, 391, 577, 610, 656, 673
Cfr13I	GGNCC	9 cut(s)	150, 197, 316, 332, 349, 422, 433, 445, 902
Cfr42I	CCGCGG	1 cut(s)	156
CseI	GACGC	2 cut(s)	239, 302
CviAII	CATG	6 cut(s)	118, 313, 325, 634, 932, 1033
DdeI	CTNAG	4 cut(s)	282, 795, 878, 1102
DinI	GGCGCC	1 cut(s)	778
DpnI	GATC	4 cut(s)	574, 813, 936, 1059
DpnII	GATC	4 cut(s)	572, 811, 934, 1057
DraIII	CACNNNGTG	1 cut(s)	1171
DriI	GACNNNNNGTC	1 cut(s)	61
EaeI	YGGCCR	4 cut(s)	3, 120, 393, 608
EagI	CGGCCG	1 cut(s)	393
Eam1104I	CTCTTC	1 cut(s)	772
Eam1105I	GACNNNNNGTC	1 cut(s)	61
EarI	CTCTTC	1 cut(s)	772
EclXI	CGGCCG	1 cut(s)	393
Eco31I	GGTCTC	2 cut(s)	888, 1182
Eco47I	GGWCC	4 cut(s)	349, 433, 445, 902
Eco52I	CGGCCG	1 cut(s)	393
Eco91I	GGTNACC	1 cut(s)	659
EcoO65I	GGTNACC	1 cut(s)	659
EcoRI	GAATTC	1 cut(s)	1082
EcoRII	CCWGG	2 cut(s)	176, 200
EgeI	GGCGCC	1 cut(s)	778
EheI	GGCGCC	1 cut(s)	778
FaeI	CATG	6 cut(s)	121, 316, 328, 637, 935, 1036
FalI	AAGNNNNNCTT	2 cut(s)	254, 286
FaqI	GGGAC	1 cut(s)	925
FatI	CATG	6 cut(s)	117, 312, 324, 633, 931, 1032
FauI	CCCGC	1 cut(s)	342
FauNDI	CATATG	1 cut(s)	839
FbaI	TGATCA	1 cut(s)	811
FspI	TGCGCA	1 cut(s)	957
GlaI	GCGC	6 cut(s)	130, 227, 304, 603, 778, 957
GsaI	CCCAGC	1 cut(s)	912
HaeII	RGCGCY	1 cut(s)	780
HgaI	GACGC	2 cut(s)	239, 302
HhaI	GCGC	6 cut(s)	131, 228, 305, 604, 779, 958
Hin1I	GRCGYC	4 cut(s)	144, 231, 294, 777
Hin1II	CATG	6 cut(s)	121, 316, 328, 637, 935, 1036
Hin6I	GCGC	6 cut(s)	129, 226, 303, 602, 777, 956
HinP1I	GCGC	6 cut(s)	129, 226, 303, 602, 777, 956
HinfI	GANTC	4 cut(s)	56, 62, 751, 764
HphI	GGTGA	3 cut(s)	280, 671, 1145
Hpy166II	GTNNAC	1 cut(s)	288
Hpy188I	TCNGA	7 cut(s)	13, 61, 91, 349, 412, 816, 1182
Hpy188III	TCNNGA	8 cut(s)	167, 387, 704, 743, 848, 1061, 1112, 1239
Hpy8I	GTNNAC	1 cut(s)	288
Hpy99I	CGWCG	4 cut(s)	146, 233, 296, 787
HpyAV	CCTTC	2 cut(s)	536, 1124
HpyCH4III	ACNGT	4 cut(s)	514, 670, 916, 1226
HpyCH4IV	ACGT	5 cut(s)	111, 144, 728, 785, 1235
HpyCH4V	TGCA	3 cut(s)	1041, 1096, 1119
HpyF10VI	GCNNNNNNNGC	5 cut(s)	128, 158, 161, 302, 1171
HpyF3I	CTNAG	4 cut(s)	282, 795, 878, 1102
HpySE526I	ACGT	5 cut(s)	111, 144, 728, 785, 1235
Hsp92I	GRCGYC	4 cut(s)	144, 231, 294, 777
Hsp92II	CATG	6 cut(s)	121, 316, 328, 637, 935, 1036
HspAI	GCGC	6 cut(s)	129, 226, 303, 602, 777, 956
KasI	GGCGCC	1 cut(s)	776
Kpn2I	TCCGGA	1 cut(s)	703
KroI	GCCGGC	2 cut(s)	137, 610
KroNI	GCCGGC	2 cut(s)	139, 612
Ksp22I	TGATCA	1 cut(s)	811
KspI	CCGCGG	1 cut(s)	156
Kzo9I	GATC	4 cut(s)	572, 811, 934, 1057
LmnI	GCTCC	5 cut(s)	78, 181, 192, 270, 718
Lsp1109I	GCAGC	2 cut(s)	196, 813
LweI	GCATC	2 cut(s)	462, 1128
MaeII	ACGT	5 cut(s)	111, 144, 728, 785, 1235
MaeIII	GTNAC	4 cut(s)	364, 449, 659, 916
MalI	GATC	4 cut(s)	574, 813, 936, 1059
MbiI	CCGCTC	1 cut(s)	164
MboI	GATC	4 cut(s)	572, 811, 934, 1057
MboII	GAAGA	2 cut(s)	532, 759
MhlI	GDGCHC	1 cut(s)	96
MlsI	TGGCCA	2 cut(s)	5, 122
MluCI	AATT	4 cut(s)	427, 691, 1082, 1106
MluNI	TGGCCA	2 cut(s)	5, 122
Mly113I	GGCGCC	1 cut(s)	777
MlyI	GAGTC	3 cut(s)	50, 71, 758
MmeI	TCCRAC	2 cut(s)	36, 946
Mox20I	TGGCCA	2 cut(s)	5, 122
MreI	CGCCGGCG	1 cut(s)	137
MroI	TCCGGA	1 cut(s)	703
MroNI	GCCGGC	2 cut(s)	137, 610
MscI	TGGCCA	2 cut(s)	5, 122
MslI	CAYNNNNRTG	2 cut(s)	945, 1156
Msp20I	TGGCCA	2 cut(s)	5, 122
MspA1I	CMGCKG	3 cut(s)	155, 281, 337
MspR9I	CCNGG	5 cut(s)	149, 178, 202, 570, 1088
MvaI	CCWGG	2 cut(s)	178, 202
MvnI	CGCG	5 cut(s)	129, 155, 168, 228, 303
MwoI	GCNNNNNNNGC	5 cut(s)	128, 158, 161, 302, 1171
NaeI	GCCGGC	2 cut(s)	139, 612
NarI	GGCGCC	1 cut(s)	777
NciI	CCSGG	3 cut(s)	149, 570, 1088
NdeI	CATATG	1 cut(s)	839
NdeII	GATC	4 cut(s)	572, 811, 934, 1057
NgoMIV	GCCGGC	2 cut(s)	137, 610
NlaIII	CATG	6 cut(s)	121, 316, 328, 637, 935, 1036
NlaIV	GGNNCC	4 cut(s)	199, 424, 672, 778
NmuCI	GTSAC	3 cut(s)	364, 449, 659
NruI	TCGCGA	1 cut(s)	168
NsbI	TGCGCA	1 cut(s)	957
OliI	CACNNNNGTG	1 cut(s)	1156
PdiI	GCCGGC	2 cut(s)	139, 612
PfeI	GAWTC	1 cut(s)	751
PfoI	TCCNGGA	1 cut(s)	1086
PleI	GAGTC	3 cut(s)	50, 70, 758
PluTI	GGCGCC	1 cut(s)	780
PpsI	GAGTC	3 cut(s)	50, 70, 758
PshAI	GACNNNNGTC	2 cut(s)	371, 438
Psp6I	CCWGG	2 cut(s)	176, 200
PspEI	GGTNACC	1 cut(s)	659
PspFI	CCCAGC	1 cut(s)	908
PspGI	CCWGG	2 cut(s)	176, 200
PspN4I	GGNNCC	4 cut(s)	199, 424, 672, 778
PspPI	GGNCC	9 cut(s)	150, 197, 316, 332, 349, 422, 433, 445, 902
PsrI	GAACNNNNNNTAC	2 cut(s)	549, 581
RruI	TCGCGA	1 cut(s)	168
RseI	CAYNNNNRTG	2 cut(s)	945, 1156
SacII	CCGCGG	1 cut(s)	156
Sau3AI	GATC	4 cut(s)	572, 811, 934, 1057
Sau96I	GGNCC	9 cut(s)	150, 197, 316, 332, 349, 422, 433, 445, 902
SchI	GAGTC	3 cut(s)	50, 71, 758
ScrFI	CCNGG	5 cut(s)	149, 178, 202, 570, 1088
SduI	GDGCHC	1 cut(s)	96
SfaNI	GCATC	2 cut(s)	462, 1128
SfiI	GGCCNNNNNGGCC	1 cut(s)	158
SfoI	GGCGCC	1 cut(s)	778
Sfr303I	CCGCGG	1 cut(s)	156
SgrAI	CRCCGGYG	1 cut(s)	137
SgrBI	CCGCGG	1 cut(s)	156
SinI	GGWCC	4 cut(s)	349, 433, 445, 902
SmiMI	CAYNNNNRTG	2 cut(s)	945, 1156
SmlI	CTYRAG	2 cut(s)	743, 1045
SmoI	CTYRAG	2 cut(s)	743, 1045
Sse9I	AATT	4 cut(s)	427, 691, 1082, 1106
SspDI	GGCGCC	1 cut(s)	776
StyD4I	CCNGG	5 cut(s)	147, 176, 200, 568, 1086
TaaI	ACNGT	4 cut(s)	514, 670, 916, 1226
TaiI	ACGT	5 cut(s)	114, 147, 731, 788, 1238
TaqI	TCGA	2 cut(s)	54, 309
TasI	AATT	4 cut(s)	427, 691, 1082, 1106
TfiI	GAWTC	1 cut(s)	751
TseFI	GTSAC	3 cut(s)	364, 449, 659
TseI	GCWGC	2 cut(s)	184, 826
Tsp45I	GTSAC	3 cut(s)	364, 449, 659
TspDTI	ATGAA	1 cut(s)	987
TspGWI	ACGGA	3 cut(s)	199, 437, 482
VpaK11BI	GGWCC	4 cut(s)	349, 433, 445, 902
XapI	RAATTY	2 cut(s)	1082, 1106
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1158
ZraI	GACGTC	1 cut(s)	145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.