FvH4_4g00190

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0005296
Physical Location & Seq
Forward (+)
211219 .. 217483
6265 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00190.t3

Sequence Viewer

Length: 2034 bp
ATGGACGACCAAGATCGAATCGTCTCCACCGGAGAGAGGCCTGTTAAGCCAGATGTCTTGAAAGAGCAGCCAGCTTCGCCCAAAGATGAGAGGATAGCTTCAGCAAATCCTTCTCCGGCTGCACTCATAACAGGGCCTTCACACAATGCCACAGAACAACCCAAGTTTTCAGATGGTGGTGGAGAACATAGCTCCACCCATCCACTCAATTTGTATGGGTCCAACGAACCGAGTTATGGAAGTAGCACTGGTACTTGGGATGGATATCCTCAGTATCTCAATACTGATGGAATGCATATTGTATCACCGGTCATGTACAGTGATAATCCGTCTCTTCTGTATCACTCTGGTTATGGTTTCAATCCCGAAATTGCATATGGACAATATTCACCAGTCACTACACCTTTGGCTTCTTATTTCGTAGATGGCCAACTGTATTCTCCACAACAGGTCCCCTTCTCTCCATCTTATTACCCACAACCGTCTCCTCCAAGTCTGTCTCCTATTACTTCAGCTTTTCCATTGACGCCGACTGAGCTGATGACCTCAGAGAGTAGCAGCACTGACAACATGGCCTTTGGGCCAGGATCAGGTTACTTTGTAAATTTTAGATCATTTAGTGGAGCAGATCTGTCTGGAAATCTTGGTTCGAGCCCTTTAGCATCTCCAGGGATTTATCCTCAGCCTATGGGCATACTTGGATCTTATGAACAGAGTGTTGGGCAGATTTCTCATCCACAGAGGTCAATGCATGGATATGGGCTGGTATCTAGTTCCTTTACAGGGCGCTACCCACAGAATACTTCTCATCAGGGCTCCAACTTTGGTGGTCCTTCCCTTTCTTACTCGTTTGGTAATGACCCGAGCCGACTGACTGTTGACAAGGGTAGAAGAAGAGAGAGGGACTGGGATTCAGTTTCTGTTTTCAGTAATTCACATGATATCTCCAATGACCGCAATCGAGGACCGAGGGCTTCAAAGCTGAAGGACAAGAGCGTTTCTGACCAGGGCTCTTCATCTAGTGCCAGGAAAATGGATTTATCTGCTTCTGGAATCAACCTTGACTCAATTAACCGGCAGGATTTTGTCACAGATTACAAGGAGGCAAAGTTCTTTATCATTAAGTCTTTCAGTGAGGATAATGTTCATAAAAGTATTAAATACAGTGTTTGGGCCAGCACTCCCCATGGAAACAAAAAGCTTGATGCTGCTTATCATGAGGCGAAGAGGATAAAATGCAGCTGTCCAATCTTCCTCTTATTTTCGGTTAATGCTAGCGGACAGTTTTGCGGAGTAGCCGAAATGGTTGGACCAGTAGATTTTGAAAAAGATGCTGATTACTGGCAGCAAGATAGGTGGAATGGCCAATTTCCAGTTCAGTGGCACATTATTAAGGATGTTCCTAACATTCGCTTCCGTCACATTCTACTAGAAAATAATGATAATAAGCCTGTCACTCACAGCCGAGATTGTCAGGAGGTGAATCTGAACCAAGGAATTGAGCTATTGAAAATTTTCAATGATCATGATGCACGGACATCTATAGTTGATGATTTTGAATTTTATGATGACCGCGAAAGGTCCTTGAAGGAAAGGAAAGCCAGACAACAGGCTTGTGCAACTAAAGATGCCTCTGATTCACTTGCTCTTGAGACTGTTAAGGAAATTTCTAATCTTTCCGATCAAGCCTTGGAGACTGTTAAGGAAAGGAAAGCCAGACAACAAGCTTGTGCAACTAAAGATGCCTCTGATTCACTTGCTCTTGAGACTGTTAAGGAAATTTCTAATATTTCCGATCAAGCCTTGGAGATGAAAGGAAGTAGTGGCAAAGAATTTGCCGAAACTGAACATGAGAGTAGCTCCAAAACGGATTCGGTTGTATATGAACATGATGCTGTACAGCAAATATCTGATAGTTTATCTCAAGTACTGCAGTTGGAAGAGAGTGACAAAGAGTTAGTACCATCATCTGAAAGAGGTGTCACACCTGACAGTGAGTTTGTTGATGAGAAGGTAACAGTTGTATTAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

678

Amino Acids

74.66

Weight (kDa)

5.12

Isoelectric Point (pI)

49.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 369 - 507 6.6e-50 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1575
AciI CCGC 4 cut(s) 955, 1278, 1290, 1573
AclWI GGATC 2 cut(s) 595, 709
AcoI YGGCCR 2 cut(s) 427, 1363
AcsI RAATTY 6 cut(s) 604, 1512, 1559, 1665, 1779, 1832
AcuI CTGAAG 3 cut(s) 84, 495, 1004
AcyI GRCGYC 1 cut(s) 527
AfaI GTAC 5 cut(s) 253, 317, 1899, 1929, 1962
AfiI CCNNNNNNNGG 4 cut(s) 36, 236, 590, 783
AgeI ACCGGT 1 cut(s) 307
AgsI TTSAA 8 cut(s) 61, 361, 978, 1325, 1510, 1519, 1559, 1588
AjnI CCWGG 4 cut(s) 583, 667, 1005, 1025
AjuI GAANNNNNNNTTGG 4 cut(s) 702, 734, 1359, 1391
AloI GAACNNNNNNTCC 2 cut(s) 1094, 1126
Alw26I GTCTC 7 cut(s) 28, 336, 489, 504, 1646, 1688, 1760
AlwI GGATC 2 cut(s) 595, 709
AlwNI CAGNNNCTG 1 cut(s) 920
Ama87I CYCGRG 1 cut(s) 862
AoxI GGCC 7 cut(s) 38, 134, 427, 573, 581, 1173, 1363
ApeKI GCWGC 6 cut(s) 67, 119, 558, 1208, 1239, 1345
ApoI RAATTY 6 cut(s) 604, 1512, 1559, 1665, 1779, 1832
ArsI GACNNNNNNTTYG 2 cut(s) 1982, 2014
AsiGI ACCGGT 1 cut(s) 307
Asp700I GAANNNNTTC 1 cut(s) 1514
AspLEI GCGC 1 cut(s) 789
AspS9I GGNCC 9 cut(s) 134, 219, 451, 581, 830, 965, 1173, 1310, 1581
AsuHPI GGTGA 3 cut(s) 297, 381, 1492
AsuNHI GCTAGC 1 cut(s) 1274
AvaI CYCGRG 1 cut(s) 862
AvaII GGWCC 6 cut(s) 219, 451, 830, 965, 1310, 1581
BalI TGGCCA 2 cut(s) 429, 1365
BanII GRGCYC 3 cut(s) 656, 818, 1013
BbvCI CCTCAGC 1 cut(s) 681
BbvI GCAGC 6 cut(s) 79, 106, 570, 1195, 1251, 1357
BccI CCATC 7 cut(s) 167, 207, 254, 281, 419, 472, 1972
BciT130I CCWGG 4 cut(s) 585, 669, 1007, 1027
BclI TGATCA 1 cut(s) 1522
BcoDI GTCTC 7 cut(s) 28, 336, 489, 504, 1646, 1688, 1760
BfaI CTAG 4 cut(s) 771, 1020, 1275, 1430
BfmI CTRYAG 2 cut(s) 1542, 1931
BfoI RGCGCY 1 cut(s) 790
BglII AGATCT 1 cut(s) 628
BisI GCNGC 6 cut(s) 68, 120, 559, 1209, 1240, 1346
BlsI GCNGC 6 cut(s) 69, 121, 560, 1210, 1241, 1347
BmcAI AGTACT 1 cut(s) 1929
Bme1390I CCNGG 4 cut(s) 585, 669, 1007, 1027
Bme18I GGWCC 6 cut(s) 219, 451, 830, 965, 1310, 1581
BmeT110I CYCGRG 1 cut(s) 862
BmgT120I GGNCC 9 cut(s) 134, 219, 451, 581, 830, 965, 1173, 1310, 1581
BmiI GGNNCC 3 cut(s) 220, 453, 817
BmrFI CCNGG 4 cut(s) 585, 669, 1007, 1027
BmrI ACTGGG 1 cut(s) 916
BmsI GCATC 7 cut(s) 671, 1195, 1321, 1519, 1618, 1732, 1882
BmtI GCTAGC 1 cut(s) 1278
BmuI ACTGGG 1 cut(s) 916
BplI GAGNNNNNCTC 2 cut(s) 1844, 1876
BpmI CTGGAG 1 cut(s) 651
Bpu10I CCTNAGC 1 cut(s) 681
BpuEI CTTGAG 3 cut(s) 1670, 1784, 1908
BsaBI GATNNNNATC 1 cut(s) 264
BsaHI GRCGYC 1 cut(s) 527
BsaJI CCNNGG 7 cut(s) 668, 968, 1006, 1186, 1492, 1689, 1803
BsaWI WCCGGW 2 cut(s) 29, 307
BsaXI ACNNNNNCTCC 2 cut(s) 1094, 1124
Bsc4I CCNNNNNNNGG 4 cut(s) 36, 236, 590, 783
Bse118I RCCGGY 2 cut(s) 307, 1074
Bse1I ACTGG 6 cut(s) 253, 392, 911, 1313, 1346, 1373
Bse8I GATNNNNATC 1 cut(s) 264
BseBI CCWGG 4 cut(s) 585, 669, 1007, 1027
BseDI CCNNGG 7 cut(s) 668, 968, 1006, 1186, 1492, 1689, 1803
BseGI GGATG 4 cut(s) 199, 265, 733, 1402
BseJI GATNNNNATC 1 cut(s) 264
BseLI CCNNNNNNNGG 4 cut(s) 36, 236, 590, 783
BseMII CTCAG 4 cut(s) 284, 525, 561, 695
BseNI ACTGG 6 cut(s) 253, 392, 911, 1313, 1346, 1373
BseRI GAGGAG 1 cut(s) 477
BseXI GCAGC 6 cut(s) 79, 106, 570, 1195, 1251, 1357
BsgI GTGCAG 1 cut(s) 105
Bsh1236I CGCG 1 cut(s) 1575
BshFI GGCC 7 cut(s) 40, 136, 429, 575, 583, 1175, 1365
BshTI ACCGGT 1 cut(s) 307
BsiHKCI CYCGRG 1 cut(s) 862
BsiSI CCGG 4 cut(s) 30, 116, 308, 1075
BslFI GGGAC 2 cut(s) 437, 917
BslI CCNNNNNNNGG 4 cut(s) 36, 236, 590, 783
BsmAI GTCTC 7 cut(s) 28, 336, 489, 504, 1646, 1688, 1760
BsmBI CGTCTC 3 cut(s) 28, 336, 489
BsmFI GGGAC 2 cut(s) 437, 917
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 7 cut(s) 40, 136, 429, 575, 583, 1175, 1365
BsoBI CYCGRG 1 cut(s) 862
Bsp1286I GDGCHC 3 cut(s) 656, 818, 1013
Bsp1407I TGTACA 2 cut(s) 315, 1897
Bsp143I GATC 8 cut(s) 13, 587, 611, 628, 701, 1522, 1681, 1795
Bsp19I CCATGG 1 cut(s) 1186
BspACI CCGC 4 cut(s) 955, 1278, 1290, 1573
BspANI GGCC 7 cut(s) 40, 136, 429, 575, 583, 1175, 1365
BspCNI CTCAG 4 cut(s) 283, 526, 560, 694
BspFNI CGCG 1 cut(s) 1575
BspHI TCATGA 2 cut(s) 1216, 1525
BspLI GGNNCC 3 cut(s) 220, 453, 817
BspMAI CTGCAG 1 cut(s) 1935
BspOI GCTAGC 1 cut(s) 1278
BspPI GGATC 2 cut(s) 595, 709
BspQI GCTCTTC 1 cut(s) 1018
BsrFI RCCGGY 2 cut(s) 307, 1074
BsrGI TGTACA 2 cut(s) 315, 1897
BsrI ACTGG 6 cut(s) 253, 392, 911, 1313, 1346, 1373
BssAI RCCGGY 2 cut(s) 307, 1074
BssECI CCNNGG 7 cut(s) 668, 968, 1006, 1186, 1492, 1689, 1803
BssMI GATC 8 cut(s) 13, 587, 611, 628, 701, 1522, 1681, 1795
BssNI GRCGYC 1 cut(s) 527
BssT1I CCWWGG 4 cut(s) 1186, 1492, 1689, 1803
Bst2UI CCWGG 4 cut(s) 585, 669, 1007, 1027
Bst6I CTCTTC 5 cut(s) 339, 889, 1018, 1220, 1935
BstACI GRCGYC 1 cut(s) 527
BstAUI TGTACA 2 cut(s) 315, 1897
BstC8I GCNNGC 3 cut(s) 72, 1177, 1276
BstDEI CTNAG 4 cut(s) 270, 534, 547, 681
BstDSI CCRYGG 1 cut(s) 1186
BstF5I GGATG 4 cut(s) 199, 265, 733, 1402
BstFNI CGCG 1 cut(s) 1575
BstH2I RGCGCY 1 cut(s) 790
BstHHI GCGC 1 cut(s) 789
BstKTI GATC 8 cut(s) 16, 590, 614, 631, 704, 1525, 1684, 1798
BstMAI GTCTC 7 cut(s) 28, 336, 489, 504, 1646, 1688, 1760
BstMBI GATC 8 cut(s) 13, 587, 611, 628, 701, 1522, 1681, 1795
BstMWI GCNNNNNNNGC 3 cut(s) 46, 76, 535
BstNI CCWGG 4 cut(s) 585, 669, 1007, 1027
BstSCI CCNGG 4 cut(s) 583, 667, 1005, 1025
BstSFI CTRYAG 2 cut(s) 1542, 1931
BstUI CGCG 1 cut(s) 1575
BstV1I GCAGC 6 cut(s) 79, 106, 570, 1195, 1251, 1357
BstX2I RGATCY 2 cut(s) 628, 701
BstXI CCANNNNNNTGG 2 cut(s) 1033, 1380
BstYI RGATCY 2 cut(s) 628, 701
BsuRI GGCC 7 cut(s) 40, 136, 429, 575, 583, 1175, 1365
BtgI CCRYGG 1 cut(s) 1186
BtsCI GGATG 4 cut(s) 199, 265, 733, 1402
BtsIMutI CAGTG 7 cut(s) 246, 325, 561, 1138, 1171, 1385, 1999
Cac8I GCNNGC 3 cut(s) 72, 1177, 1276
CaiI CAGNNNCTG 1 cut(s) 920
CciI TCATGA 2 cut(s) 1216, 1525
CfoI GCGC 1 cut(s) 789
Cfr10I RCCGGY 2 cut(s) 307, 1074
Cfr13I GGNCC 9 cut(s) 134, 219, 451, 581, 830, 965, 1173, 1310, 1581
CseI GACGC 1 cut(s) 535
Csp6I GTAC 5 cut(s) 252, 316, 1898, 1928, 1961
CspAI ACCGGT 1 cut(s) 307
CspCI CAANNNNNGTGG 6 cut(s) 192, 227, 808, 843, 1337, 1372
CviAII CATG 9 cut(s) 313, 571, 752, 938, 1187, 1217, 1526, 1850, 1889
CviQI GTAC 5 cut(s) 252, 316, 1898, 1928, 1961
DdeI CTNAG 4 cut(s) 270, 534, 547, 681
DpnI GATC 8 cut(s) 15, 589, 613, 630, 703, 1524, 1683, 1797
DpnII GATC 8 cut(s) 13, 587, 611, 628, 701, 1522, 1681, 1795
EaeI YGGCCR 2 cut(s) 427, 1363
Eam1104I CTCTTC 5 cut(s) 339, 889, 1018, 1220, 1935
EarI CTCTTC 5 cut(s) 339, 889, 1018, 1220, 1935
Eco130I CCWWGG 4 cut(s) 1186, 1492, 1689, 1803
Eco147I AGGCCT 1 cut(s) 40
Eco24I GRGCYC 3 cut(s) 656, 818, 1013
Eco32I GATATC 2 cut(s) 266, 943
Eco47I GGWCC 6 cut(s) 219, 451, 830, 965, 1310, 1581
Eco57I CTGAAG 3 cut(s) 84, 495, 1004
Eco88I CYCGRG 1 cut(s) 862
EcoO109I RGGNCCY 3 cut(s) 134, 451, 1581
EcoRII CCWGG 4 cut(s) 583, 667, 1005, 1025
EcoRV GATATC 2 cut(s) 266, 943
EcoT14I CCWWGG 4 cut(s) 1186, 1492, 1689, 1803
EcoT22I ATGCAT 2 cut(s) 297, 753
EcoT38I GRGCYC 3 cut(s) 656, 818, 1013
ErhI CCWWGG 4 cut(s) 1186, 1492, 1689, 1803
Esp3I CGTCTC 3 cut(s) 28, 336, 489
FaeI CATG 9 cut(s) 316, 574, 755, 941, 1190, 1220, 1529, 1853, 1892
FaqI GGGAC 2 cut(s) 437, 917
FatI CATG 9 cut(s) 312, 570, 751, 937, 1186, 1216, 1525, 1849, 1888
FauNDI CATATG 1 cut(s) 376
FbaI TGATCA 1 cut(s) 1522
Fnu4HI GCNGC 6 cut(s) 68, 120, 559, 1209, 1240, 1346
FokI GGATG 4 cut(s) 186, 272, 720, 1409
FriOI GRGCYC 3 cut(s) 656, 818, 1013
Fsp4HI GCNGC 6 cut(s) 68, 120, 559, 1209, 1240, 1346
FspBI CTAG 4 cut(s) 771, 1020, 1275, 1430
GlaI GCGC 1 cut(s) 788
GluI GCNGC 6 cut(s) 68, 120, 559, 1209, 1240, 1346
GsuI CTGGAG 1 cut(s) 651
HaeII RGCGCY 1 cut(s) 790
HaeIII GGCC 7 cut(s) 40, 136, 429, 575, 583, 1175, 1365
HapII CCGG 4 cut(s) 30, 116, 308, 1075
HgaI GACGC 1 cut(s) 535
HhaI GCGC 1 cut(s) 789
Hin1I GRCGYC 1 cut(s) 527
Hin1II CATG 9 cut(s) 316, 574, 755, 941, 1190, 1220, 1529, 1853, 1892
Hin6I GCGC 1 cut(s) 787
HinP1I GCGC 1 cut(s) 787
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HindIII AAGCTT 2 cut(s) 1199, 1725
HinfI GANTC 8 cut(s) 18, 911, 1053, 1064, 1483, 1637, 1751, 1871
HpaII CCGG 4 cut(s) 30, 116, 308, 1075
HphI GGTGA 3 cut(s) 297, 381, 1492
Hpy166II GTNNAC 1 cut(s) 880
Hpy188III TCNNGA 9 cut(s) 58, 365, 636, 1050, 1217, 1475, 1526, 1649, 1763
Hpy8I GTNNAC 1 cut(s) 880
HpyAV CCTTC 7 cut(s) 120, 147, 466, 843, 979, 1582, 2005
HpyCH4V TGCA 9 cut(s) 122, 295, 374, 751, 1239, 1532, 1619, 1733, 1933
HpyF10VI GCNNNNNNNGC 3 cut(s) 46, 76, 535
HpyF3I CTNAG 4 cut(s) 270, 534, 547, 681
Hsp92I GRCGYC 1 cut(s) 527
Hsp92II CATG 9 cut(s) 316, 574, 755, 941, 1190, 1220, 1529, 1853, 1892
HspAI GCGC 1 cut(s) 787
Ksp22I TGATCA 1 cut(s) 1522
Kzo9I GATC 8 cut(s) 13, 587, 611, 628, 701, 1522, 1681, 1795
LguI GCTCTTC 1 cut(s) 1018
LmnI GCTCC 4 cut(s) 197, 623, 821, 1865
Lsp1109I GCAGC 6 cut(s) 79, 106, 570, 1195, 1251, 1357
LweI GCATC 7 cut(s) 671, 1195, 1321, 1519, 1618, 1732, 1882
MaeI CTAG 4 cut(s) 771, 1020, 1275, 1430
MaeIII GTNAC 8 cut(s) 394, 593, 1087, 1418, 1453, 1946, 1981, 2014
MalI GATC 8 cut(s) 15, 589, 613, 630, 703, 1524, 1683, 1797
MboI GATC 8 cut(s) 13, 587, 611, 628, 701, 1522, 1681, 1795
MboII GAAGA 7 cut(s) 326, 903, 906, 1005, 1237, 1243, 1952
MflI RGATCY 2 cut(s) 628, 701
MhlI GDGCHC 3 cut(s) 656, 818, 1013
MlsI TGGCCA 2 cut(s) 429, 1365
MluNI TGGCCA 2 cut(s) 429, 1365
MlyI GAGTC 1 cut(s) 1058
MmeI TCCRAC 4 cut(s) 246, 843, 1288, 1917
Mox20I TGGCCA 2 cut(s) 429, 1365
Mph1103I ATGCAT 2 cut(s) 297, 753
MroXI GAANNNNTTC 1 cut(s) 1514
MscI TGGCCA 2 cut(s) 429, 1365
MslI CAYNNNNRTG 1 cut(s) 756
Msp20I TGGCCA 2 cut(s) 429, 1365
MspA1I CMGCKG 1 cut(s) 1242
MspI CCGG 4 cut(s) 30, 116, 308, 1075
MspR9I CCNGG 4 cut(s) 585, 669, 1007, 1027
Mva1269I GAATGC 1 cut(s) 297
MvaI CCWGG 4 cut(s) 585, 669, 1007, 1027
MvnI CGCG 1 cut(s) 1575
MwoI GCNNNNNNNGC 3 cut(s) 46, 76, 535
NcoI CCATGG 1 cut(s) 1186
NdeI CATATG 1 cut(s) 376
NdeII GATC 8 cut(s) 13, 587, 611, 628, 701, 1522, 1681, 1795
NheI GCTAGC 1 cut(s) 1274
NlaIII CATG 9 cut(s) 316, 574, 755, 941, 1190, 1220, 1529, 1853, 1892
NlaIV GGNNCC 3 cut(s) 220, 453, 817
NmeAIII GCCGAG 1 cut(s) 1490
NmuCI GTSAC 6 cut(s) 394, 1087, 1418, 1453, 1946, 1981
NsiI ATGCAT 2 cut(s) 297, 753
PagI TCATGA 2 cut(s) 1216, 1525
PceI AGGCCT 1 cut(s) 40
PciSI GCTCTTC 1 cut(s) 1018
PctI GAATGC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 1514
PfeI GAWTC 7 cut(s) 18, 911, 1053, 1483, 1637, 1751, 1871
PinAI ACCGGT 1 cut(s) 307
PkrI GCNGC 6 cut(s) 69, 121, 560, 1210, 1241, 1347
PleI GAGTC 1 cut(s) 1058
PpsI GAGTC 1 cut(s) 1058
PpuMI RGGWCCY 2 cut(s) 451, 1581
Psp5II RGGWCCY 2 cut(s) 451, 1581
Psp6I CCWGG 4 cut(s) 583, 667, 1005, 1025
PspGI CCWGG 4 cut(s) 583, 667, 1005, 1025
PspN4I GGNNCC 3 cut(s) 220, 453, 817
PspPI GGNCC 9 cut(s) 134, 219, 451, 581, 830, 965, 1173, 1310, 1581
PspPPI RGGWCCY 2 cut(s) 451, 1581
PstI CTGCAG 1 cut(s) 1935
PstNI CAGNNNCTG 1 cut(s) 920
PsuI RGATCY 2 cut(s) 628, 701
PvuII CAGCTG 1 cut(s) 1242
RsaI GTAC 5 cut(s) 253, 317, 1899, 1929, 1962
RsaNI GTAC 5 cut(s) 252, 316, 1898, 1928, 1961
RseI CAYNNNNRTG 1 cut(s) 756
SapI GCTCTTC 1 cut(s) 1018
SatI GCNGC 6 cut(s) 68, 120, 559, 1209, 1240, 1346
Sau3AI GATC 8 cut(s) 13, 587, 611, 628, 701, 1522, 1681, 1795
Sau96I GGNCC 9 cut(s) 134, 219, 451, 581, 830, 965, 1173, 1310, 1581
ScaI AGTACT 1 cut(s) 1929
SchI GAGTC 1 cut(s) 1058
ScrFI CCNGG 4 cut(s) 585, 669, 1007, 1027
SduI GDGCHC 3 cut(s) 656, 818, 1013
SfaNI GCATC 7 cut(s) 671, 1195, 1321, 1519, 1618, 1732, 1882
SfcI CTRYAG 2 cut(s) 1542, 1931
SinI GGWCC 6 cut(s) 219, 451, 830, 965, 1310, 1581
SmiMI CAYNNNNRTG 1 cut(s) 756
SmlI CTYRAG 3 cut(s) 1649, 1763, 1923
SmoI CTYRAG 3 cut(s) 1649, 1763, 1923
SseBI AGGCCT 1 cut(s) 40
SsiI CCGC 4 cut(s) 955, 1278, 1290, 1573
SspI AATATT 2 cut(s) 386, 1789
SspMI CTAG 4 cut(s) 771, 1020, 1275, 1430
StuI AGGCCT 1 cut(s) 40
StyD4I CCNGG 4 cut(s) 583, 667, 1005, 1025
StyI CCWWGG 4 cut(s) 1186, 1492, 1689, 1803
TaqI TCGA 3 cut(s) 16, 650, 961
TaqII GACCGA 1 cut(s) 982
TatI WGTACW 3 cut(s) 315, 1897, 1927
TfiI GAWTC 7 cut(s) 18, 911, 1053, 1483, 1637, 1751, 1871
TscAI CASTG 7 cut(s) 253, 325, 568, 1138, 1171, 1385, 1999
TseFI GTSAC 6 cut(s) 394, 1087, 1418, 1453, 1946, 1981
TseI GCWGC 6 cut(s) 67, 119, 558, 1208, 1239, 1345
Tsp45I GTSAC 6 cut(s) 394, 1087, 1418, 1453, 1946, 1981
TspDTI ATGAA 5 cut(s) 723, 1005, 1136, 1826, 1899
TspGWI ACGGA 4 cut(s) 318, 1406, 1549, 1883
TspRI CASTG 7 cut(s) 253, 325, 568, 1138, 1171, 1385, 1999
VpaK11BI GGWCC 6 cut(s) 219, 451, 830, 965, 1310, 1581
XapI RAATTY 6 cut(s) 604, 1512, 1559, 1665, 1779, 1832
XmnI GAANNNNTTC 1 cut(s) 1514
XspI CTAG 4 cut(s) 771, 1020, 1275, 1430
ZrmI AGTACT 1 cut(s) 1929
Zsp2I ATGCAT 2 cut(s) 297, 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.