Rh4BG001300

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0005296
Physical Location & Seq
Forward (+)
256920 .. 262508
5589 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG001300.1

Sequence Viewer

Length: 1908 bp
ATGGACGACCAAGATCGAATCGTCTCCACTGGAGAGAGACCTGTTAAGCCAGATGTCTTGAAAGAGCAGCCAGTTTTGCCCAAAGATGAGAGGATAGCTTCAGCAAATCCTTCTCCTGCTGCAGTCATTACAGGGCCTTCACGCACTGCCACAGAACAACCCAAGTTTTCAGATGTTGCAGGAGAACTTAGCACCACCCATCCACTCAATTTGTATGGATCCAATGAACAGAGTTATGGAAGTAGCACTGGTACTTGGGATGGATATCCTCAGTATATCAATACTGATGGAATGCATGTTGTATCACCGGTAATGTACAGTGATAATCCATCTCTTCTGTATCACTCTGGTTATGGTTTCAATCCCGAAATTGCATATGGACCATATTCACCGGTTGCTACACCTTTGGCTTCTTATTTGGTAGATGGCCAGCTGTATTCTCCACAACAGGTCCCCTTCTCTCCATCTTATTACCCTCAACCATCTCCTCCAAGTCTGTCTCATATTACTTCAGCTATTCCAGTGACACCAACTGAGCGGATGACCTCAGAAAGTAGTAGCACTGACAACATGGCCTTTGGGCCAGGATCAGGTTACTTTGTAAATTTTAGATCATTTAGTGGAGGAGATCTATCTGGAAATCTTGGTTCGAGCCCTTTAGCATCTCCAGGGATTTACCCTCAGCCAATGGGCATACTTGGATCTTATGAGCACAGTGTTGGGCAGAGATCAATGCATGGATTTGGACTGGTATCTAGTTCCTTTACAGGGCGCTACCCACATAATACTTCTCATCAGAGCTCCAACTTTGGTGGTCCTTCTTACTCGTTTGGTAATGACCGGAGCCGACTGACTGTTGACAAGGGTAGAAGAAGAGATAGGGAGTGGGATTCAATTTCCGTTTTCAGTAATTCACATGATATCTCCAATGACCGTAATCGAGGACCAAGGGCTTCAAAGCTGAAGGACAAGAACGTGTCTGACCAGGGCTCTTCATCTAGTGCTAGGAAAATGGATCTATCTGCTTCTGGAATTAACCTCGACTCAATTAACCGGAAGGATTTTGTCACAGATTATGAGGAGGCAAAGTTCTTTATCATTAAGTCTTTCAGTGAGGATAATGTTCATAAAAGTATTAAATACAGTGTTTGGGCCAGCACTCCCCATGGAAACAAGAAGCTTGATGCTGCTTATCATGAGGCGAAGAGGATAAAAAGCAGCTGTCCAGTCTTTCTCTTATTTTCGGTTAATGCCAGTGGACAGTTTTGTGGAGTAGCCGAAATGATTGGACCAGTAGACTTTAGAAAAGATGCTGATTACTGGCAGCAAGACAGGTGGAATGGCCAATTTAAAGTTCAGTGGCACATTATTAAGGATGTTCCTAACATTCGCTTCCGTCACATTCTACTTGAAAATAATGATAATAAGCCTGTCACTCACAGCCGAGATTGTCAGGAGGTGAATCTGAAACAAGGAATTGAGCTGTTGAAAATTTTCAATGATTATGATGCACGGACATCTATAGTTGATGATTTTGAATTTTATGATGACCGCGAAAGGTCCTTGAAGGAAAGGAAAGCCAGGCAACAAGCTTGTGCAACTACAGATGCTTCTGAGTCAGTTGCTCTTGATTCTGTTAAGGAAGCTTCTAATATTTCCGATCAAGCCTTGGAGATGAAAGGAAGTAATAGCAAAGAATTTACAGGAACTGAACATGACAGTAGCTCCAAAACAGATTCAGTTGTATATGAACATGATGCTGTACAGCAAATATCTGATAGTTTATCTCAAGTATTGCAGTTGGAAGAGAGTGACAAAGAGGTAGTACCACCATCTGAAAGAGGCGGCACACATGACAGCGAGTCCGTTGACAAGGAGGTAACAGTTGTACCTGTTGTATCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

635

Amino Acids

70.12

Weight (kDa)

5.39

Isoelectric Point (pI)

51.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 362 - 500 2.9e-50 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 538
AccI GTMKAC 1 cut(s) 1296
AccII CGCG 1 cut(s) 1554
AciI CCGC 3 cut(s) 538, 1552, 1845
AclWI GGATC 5 cut(s) 213, 226, 595, 709, 1023
AcoI YGGCCR 2 cut(s) 427, 1342
AcsI RAATTY 4 cut(s) 604, 1491, 1538, 1697
AcuI CTGAAG 3 cut(s) 84, 495, 983
AfaI GTAC 5 cut(s) 253, 317, 1764, 1827, 1890
AfiI CCNNNNNNNGG 2 cut(s) 590, 768
AflIII ACRYGT 1 cut(s) 975
AgeI ACCGGT 2 cut(s) 307, 391
AgsI TTSAA 9 cut(s) 61, 361, 894, 957, 1412, 1489, 1498, 1538, 1567
AhdI GACNNNNNGTC 1 cut(s) 1861
AjnI CCWGG 4 cut(s) 583, 667, 984, 1580
AjuI GAANNNNNNNTTGG 2 cut(s) 1338, 1370
AloI GAACNNNNNNTCC 2 cut(s) 1073, 1105
Alw21I GWGCWC 2 cut(s) 714, 803
Alw26I GTCTC 3 cut(s) 28, 31, 504
AlwI GGATC 5 cut(s) 213, 226, 595, 709, 1023
AlwNI CAGNNNCTG 1 cut(s) 1709
AoxI GGCC 6 cut(s) 134, 427, 573, 581, 1152, 1342
ApeKI GCWGC 5 cut(s) 67, 119, 1187, 1218, 1324
ApoI RAATTY 4 cut(s) 604, 1491, 1538, 1697
AsiGI ACCGGT 2 cut(s) 307, 391
Asp700I GAANNNNTTC 1 cut(s) 1493
AspLEI GCGC 1 cut(s) 774
AspS9I GGNCC 9 cut(s) 134, 380, 451, 581, 815, 944, 1152, 1289, 1560
AsuHPI GGTGA 3 cut(s) 297, 381, 1471
AvaII GGWCC 6 cut(s) 380, 451, 815, 944, 1289, 1560
BaeI ACNNNNGTAYC 2 cut(s) 1872, 1905
BalI TGGCCA 2 cut(s) 429, 1344
BamHI GGATCC 1 cut(s) 218
BanII GRGCYC 3 cut(s) 656, 803, 992
Bbv12I GWGCWC 2 cut(s) 714, 803
BbvCI CCTCAGC 1 cut(s) 681
BbvI GCAGC 5 cut(s) 79, 106, 1174, 1230, 1336
BccI CCATC 8 cut(s) 207, 254, 281, 337, 419, 472, 490, 1840
BciT130I CCWGG 4 cut(s) 585, 669, 986, 1582
BcoDI GTCTC 3 cut(s) 28, 31, 504
BfaI CTAG 3 cut(s) 756, 999, 1005
BfmI CTRYAG 3 cut(s) 120, 1521, 1602
BfoI RGCGCY 1 cut(s) 775
BglII AGATCT 1 cut(s) 628
BisI GCNGC 6 cut(s) 68, 120, 1188, 1219, 1325, 1846
BlsI GCNGC 6 cut(s) 69, 121, 1189, 1220, 1326, 1847
Bme1390I CCNGG 4 cut(s) 585, 669, 986, 1582
Bme18I GGWCC 6 cut(s) 380, 451, 815, 944, 1289, 1560
BmeRI GACNNNNNGTC 1 cut(s) 1861
BmgT120I GGNCC 9 cut(s) 134, 380, 451, 581, 815, 944, 1152, 1289, 1560
BmiI GGNNCC 3 cut(s) 220, 453, 845
BmrFI CCNGG 4 cut(s) 585, 669, 986, 1582
BmsI GCATC 6 cut(s) 671, 1174, 1300, 1498, 1597, 1747
BpmI CTGGAG 2 cut(s) 51, 651
Bpu10I CCTNAGC 1 cut(s) 681
BpuEI CTTGAG 1 cut(s) 1773
BsaBI GATNNNNATC 1 cut(s) 264
BsaI GGTCTC 1 cut(s) 31
BsaJI CCNNGG 5 cut(s) 668, 947, 985, 1165, 1668
BsaWI WCCGGW 4 cut(s) 307, 391, 840, 1053
BsaXI ACNNNNNCTCC 4 cut(s) 1073, 1103, 1709, 1739
Bsc4I CCNNNNNNNGG 2 cut(s) 590, 768
Bse118I RCCGGY 2 cut(s) 307, 391
Bse1I ACTGG 9 cut(s) 34, 71, 253, 521, 753, 1226, 1254, 1292, 1325
Bse8I GATNNNNATC 1 cut(s) 264
BseBI CCWGG 4 cut(s) 585, 669, 986, 1582
BseDI CCNNGG 5 cut(s) 668, 947, 985, 1165, 1668
BseGI GGATG 4 cut(s) 199, 265, 546, 1381
BseJI GATNNNNATC 1 cut(s) 264
BseLI CCNNNNNNNGG 2 cut(s) 590, 768
BseMII CTCAG 5 cut(s) 284, 525, 561, 695, 1605
BseNI ACTGG 9 cut(s) 34, 71, 253, 521, 753, 1226, 1254, 1292, 1325
BseRI GAGGAG 3 cut(s) 477, 639, 1094
BseXI GCAGC 5 cut(s) 79, 106, 1174, 1230, 1336
Bsh1236I CGCG 1 cut(s) 1554
BshFI GGCC 6 cut(s) 136, 429, 575, 583, 1154, 1344
BshTI ACCGGT 2 cut(s) 307, 391
BsiHKAI GWGCWC 2 cut(s) 714, 803
BsiSI CCGG 4 cut(s) 308, 392, 841, 1054
BslFI GGGAC 1 cut(s) 437
BslI CCNNNNNNNGG 2 cut(s) 590, 768
BsmAI GTCTC 3 cut(s) 28, 31, 504
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 1 cut(s) 437
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 6 cut(s) 136, 429, 575, 583, 1154, 1344
Bso31I GGTCTC 1 cut(s) 31
Bsp1286I GDGCHC 4 cut(s) 656, 714, 803, 992
Bsp1407I TGTACA 2 cut(s) 315, 1762
Bsp143I GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 728, 1015, 1660
Bsp19I CCATGG 1 cut(s) 1165
BspACI CCGC 3 cut(s) 538, 1552, 1845
BspANI GGCC 6 cut(s) 136, 429, 575, 583, 1154, 1344
BspCNI CTCAG 5 cut(s) 283, 526, 560, 694, 1606
BspFNI CGCG 1 cut(s) 1554
BspHI TCATGA 1 cut(s) 1195
BspLI GGNNCC 3 cut(s) 220, 453, 845
BspMAI CTGCAG 1 cut(s) 124
BspPI GGATC 5 cut(s) 213, 226, 595, 709, 1023
BspQI GCTCTTC 1 cut(s) 997
BspTNI GGTCTC 1 cut(s) 31
BsrBI CCGCTC 1 cut(s) 538
BsrFI RCCGGY 2 cut(s) 307, 391
BsrGI TGTACA 2 cut(s) 315, 1762
BsrI ACTGG 9 cut(s) 34, 71, 253, 521, 753, 1226, 1254, 1292, 1325
BssAI RCCGGY 2 cut(s) 307, 391
BssECI CCNNGG 5 cut(s) 668, 947, 985, 1165, 1668
BssMI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 728, 1015, 1660
BssT1I CCWWGG 3 cut(s) 947, 1165, 1668
Bst2UI CCWGG 4 cut(s) 585, 669, 986, 1582
Bst4CI ACNGT 8 cut(s) 320, 716, 856, 935, 1145, 1263, 1721, 1885
Bst6I CTCTTC 5 cut(s) 339, 868, 997, 1199, 1800
BstAUI TGTACA 2 cut(s) 315, 1762
BstC8I GCNNGC 2 cut(s) 431, 1156
BstDEI CTNAG 6 cut(s) 188, 270, 534, 547, 681, 1614
BstDSI CCRYGG 1 cut(s) 1165
BstF5I GGATG 4 cut(s) 199, 265, 546, 1381
BstFNI CGCG 1 cut(s) 1554
BstH2I RGCGCY 1 cut(s) 775
BstHHI GCGC 1 cut(s) 774
BstKTI GATC 9 cut(s) 16, 221, 590, 614, 631, 704, 731, 1018, 1663
BstMAI GTCTC 3 cut(s) 28, 31, 504
BstMBI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 728, 1015, 1660
BstMWI GCNNNNNNNGC 1 cut(s) 76
BstNI CCWGG 4 cut(s) 585, 669, 986, 1582
BstNSI RCATGY 1 cut(s) 299
BstSCI CCNGG 4 cut(s) 583, 667, 984, 1580
BstSFI CTRYAG 3 cut(s) 120, 1521, 1602
BstUI CGCG 1 cut(s) 1554
BstV1I GCAGC 5 cut(s) 79, 106, 1174, 1230, 1336
BstX2I RGATCY 4 cut(s) 218, 628, 701, 1015
BstYI RGATCY 4 cut(s) 218, 628, 701, 1015
BsuRI GGCC 6 cut(s) 136, 429, 575, 583, 1154, 1344
BtgI CCRYGG 1 cut(s) 1165
BtsCI GGATG 4 cut(s) 199, 265, 546, 1381
BtsI GCAGTG 1 cut(s) 144
Cac8I GCNNGC 2 cut(s) 431, 1156
CaiI CAGNNNCTG 1 cut(s) 1709
CciI TCATGA 1 cut(s) 1195
CfoI GCGC 1 cut(s) 774
Cfr10I RCCGGY 2 cut(s) 307, 391
Cfr13I GGNCC 9 cut(s) 134, 380, 451, 581, 815, 944, 1152, 1289, 1560
Csp6I GTAC 5 cut(s) 252, 316, 1763, 1826, 1889
CspAI ACCGGT 2 cut(s) 307, 391
CspCI CAANNNNNGTGG 6 cut(s) 192, 227, 793, 828, 1316, 1351
CviAII CATG 9 cut(s) 296, 571, 737, 917, 1166, 1196, 1715, 1754, 1853
CviQI GTAC 5 cut(s) 252, 316, 1763, 1826, 1889
DdeI CTNAG 6 cut(s) 188, 270, 534, 547, 681, 1614
DpnI GATC 9 cut(s) 15, 220, 589, 613, 630, 703, 730, 1017, 1662
DpnII GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 728, 1015, 1660
DraI TTTAAA 1 cut(s) 1351
DriI GACNNNNNGTC 1 cut(s) 1861
EaeI YGGCCR 2 cut(s) 427, 1342
Eam1104I CTCTTC 5 cut(s) 339, 868, 997, 1199, 1800
Eam1105I GACNNNNNGTC 1 cut(s) 1861
EarI CTCTTC 5 cut(s) 339, 868, 997, 1199, 1800
Ecl136II GAGCTC 1 cut(s) 801
Eco130I CCWWGG 3 cut(s) 947, 1165, 1668
Eco24I GRGCYC 3 cut(s) 656, 803, 992
Eco31I GGTCTC 1 cut(s) 31
Eco32I GATATC 2 cut(s) 266, 922
Eco47I GGWCC 6 cut(s) 380, 451, 815, 944, 1289, 1560
Eco53kI GAGCTC 1 cut(s) 801
Eco57I CTGAAG 3 cut(s) 84, 495, 983
EcoICRI GAGCTC 1 cut(s) 801
EcoO109I RGGNCCY 3 cut(s) 134, 451, 1560
EcoRII CCWGG 4 cut(s) 583, 667, 984, 1580
EcoRV GATATC 2 cut(s) 266, 922
EcoT14I CCWWGG 3 cut(s) 947, 1165, 1668
EcoT22I ATGCAT 2 cut(s) 297, 738
EcoT38I GRGCYC 3 cut(s) 656, 803, 992
ErhI CCWWGG 3 cut(s) 947, 1165, 1668
Esp3I CGTCTC 1 cut(s) 28
FaeI CATG 9 cut(s) 299, 574, 740, 920, 1169, 1199, 1718, 1757, 1856
FaqI GGGAC 1 cut(s) 437
FatI CATG 9 cut(s) 295, 570, 736, 916, 1165, 1195, 1714, 1753, 1852
FauNDI CATATG 1 cut(s) 376
FblI GTMKAC 1 cut(s) 1296
Fnu4HI GCNGC 6 cut(s) 68, 120, 1188, 1219, 1325, 1846
FokI GGATG 4 cut(s) 186, 272, 553, 1388
FriOI GRGCYC 3 cut(s) 656, 803, 992
Fsp4HI GCNGC 6 cut(s) 68, 120, 1188, 1219, 1325, 1846
FspBI CTAG 3 cut(s) 756, 999, 1005
GlaI GCGC 1 cut(s) 773
GluI GCNGC 6 cut(s) 68, 120, 1188, 1219, 1325, 1846
GsuI CTGGAG 2 cut(s) 51, 651
HaeII RGCGCY 1 cut(s) 775
HaeIII GGCC 6 cut(s) 136, 429, 575, 583, 1154, 1344
HapII CCGG 4 cut(s) 308, 392, 841, 1054
HhaI GCGC 1 cut(s) 774
Hin1II CATG 9 cut(s) 299, 574, 740, 920, 1169, 1199, 1718, 1757, 1856
Hin6I GCGC 1 cut(s) 772
HinP1I GCGC 1 cut(s) 772
HincII GTYRAC 2 cut(s) 859, 1870
HindII GTYRAC 2 cut(s) 859, 1870
HindIII AAGCTT 3 cut(s) 1178, 1590, 1644
HinfI GANTC 8 cut(s) 18, 890, 1043, 1462, 1616, 1631, 1736, 1862
HpaII CCGG 4 cut(s) 308, 392, 841, 1054
HphI GGTGA 3 cut(s) 297, 381, 1471
Hpy166II GTNNAC 4 cut(s) 859, 1259, 1297, 1870
Hpy188I TCNGA 9 cut(s) 172, 550, 798, 982, 1467, 1615, 1660, 1777, 1837
Hpy188III TCNNGA 7 cut(s) 58, 365, 636, 1029, 1196, 1454, 1628
Hpy8I GTNNAC 4 cut(s) 859, 1259, 1297, 1870
HpyAV CCTTC 7 cut(s) 120, 147, 466, 828, 958, 1051, 1561
HpyCH4III ACNGT 8 cut(s) 320, 716, 856, 935, 1145, 1263, 1721, 1885
HpyCH4IV ACGT 1 cut(s) 975
HpyCH4V TGCA 8 cut(s) 122, 179, 295, 374, 736, 1511, 1598, 1798
HpyF10VI GCNNNNNNNGC 1 cut(s) 76
HpyF3I CTNAG 6 cut(s) 188, 270, 534, 547, 681, 1614
HpySE526I ACGT 1 cut(s) 975
Hsp92II CATG 9 cut(s) 299, 574, 740, 920, 1169, 1199, 1718, 1757, 1856
HspAI GCGC 1 cut(s) 772
Kzo9I GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 728, 1015, 1660
LguI GCTCTTC 1 cut(s) 997
LmnI GCTCC 3 cut(s) 806, 843, 1730
Lsp1109I GCAGC 5 cut(s) 79, 106, 1174, 1230, 1336
LweI GCATC 6 cut(s) 671, 1174, 1300, 1498, 1597, 1747
MaeI CTAG 3 cut(s) 756, 999, 1005
MaeII ACGT 1 cut(s) 975
MaeIII GTNAC 7 cut(s) 523, 593, 1066, 1397, 1432, 1811, 1879
MalI GATC 9 cut(s) 15, 220, 589, 613, 630, 703, 730, 1017, 1662
MbiI CCGCTC 1 cut(s) 538
MboI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 728, 1015, 1660
MboII GAAGA 6 cut(s) 326, 882, 885, 984, 1216, 1817
MflI RGATCY 4 cut(s) 218, 628, 701, 1015
MhlI GDGCHC 4 cut(s) 656, 714, 803, 992
MlsI TGGCCA 2 cut(s) 429, 1344
MluNI TGGCCA 2 cut(s) 429, 1344
MlyI GAGTC 3 cut(s) 1037, 1625, 1871
MmeI TCCRAC 2 cut(s) 828, 1782
Mox20I TGGCCA 2 cut(s) 429, 1344
Mph1103I ATGCAT 2 cut(s) 297, 738
MroXI GAANNNNTTC 1 cut(s) 1493
MscI TGGCCA 2 cut(s) 429, 1344
Msp20I TGGCCA 2 cut(s) 429, 1344
MspA1I CMGCKG 2 cut(s) 433, 1221
MspI CCGG 4 cut(s) 308, 392, 841, 1054
MspR9I CCNGG 4 cut(s) 585, 669, 986, 1582
Mva1269I GAATGC 1 cut(s) 297
MvaI CCWGG 4 cut(s) 585, 669, 986, 1582
MvnI CGCG 1 cut(s) 1554
MwoI GCNNNNNNNGC 1 cut(s) 76
NcoI CCATGG 1 cut(s) 1165
NdeI CATATG 1 cut(s) 376
NdeII GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 728, 1015, 1660
NlaIII CATG 9 cut(s) 299, 574, 740, 920, 1169, 1199, 1718, 1757, 1856
NlaIV GGNNCC 3 cut(s) 220, 453, 845
NmeAIII GCCGAG 1 cut(s) 1469
NmuCI GTSAC 5 cut(s) 523, 1066, 1397, 1432, 1811
NsiI ATGCAT 2 cut(s) 297, 738
NspI RCATGY 1 cut(s) 299
PagI TCATGA 1 cut(s) 1195
PciSI GCTCTTC 1 cut(s) 997
PctI GAATGC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 1493
PfeI GAWTC 5 cut(s) 18, 890, 1462, 1631, 1736
PinAI ACCGGT 2 cut(s) 307, 391
PkrI GCNGC 6 cut(s) 69, 121, 1189, 1220, 1326, 1847
PleI GAGTC 3 cut(s) 1037, 1624, 1870
PpsI GAGTC 3 cut(s) 1037, 1624, 1870
PpuMI RGGWCCY 2 cut(s) 451, 1560
Psp124BI GAGCTC 1 cut(s) 803
Psp5II RGGWCCY 2 cut(s) 451, 1560
Psp6I CCWGG 4 cut(s) 583, 667, 984, 1580
PspGI CCWGG 4 cut(s) 583, 667, 984, 1580
PspN4I GGNNCC 3 cut(s) 220, 453, 845
PspPI GGNCC 9 cut(s) 134, 380, 451, 581, 815, 944, 1152, 1289, 1560
PspPPI RGGWCCY 2 cut(s) 451, 1560
PstI CTGCAG 1 cut(s) 124
PstNI CAGNNNCTG 1 cut(s) 1709
PsuI RGATCY 4 cut(s) 218, 628, 701, 1015
PvuII CAGCTG 2 cut(s) 433, 1221
RsaI GTAC 5 cut(s) 253, 317, 1764, 1827, 1890
RsaNI GTAC 5 cut(s) 252, 316, 1763, 1826, 1889
SacI GAGCTC 1 cut(s) 803
SapI GCTCTTC 1 cut(s) 997
SatI GCNGC 6 cut(s) 68, 120, 1188, 1219, 1325, 1846
Sau3AI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 728, 1015, 1660
Sau96I GGNCC 9 cut(s) 134, 380, 451, 581, 815, 944, 1152, 1289, 1560
SchI GAGTC 3 cut(s) 1037, 1625, 1871
ScrFI CCNGG 4 cut(s) 585, 669, 986, 1582
SduI GDGCHC 4 cut(s) 656, 714, 803, 992
SfaNI GCATC 6 cut(s) 671, 1174, 1300, 1498, 1597, 1747
SfcI CTRYAG 3 cut(s) 120, 1521, 1602
SinI GGWCC 6 cut(s) 380, 451, 815, 944, 1289, 1560
SmlI CTYRAG 1 cut(s) 1788
SmoI CTYRAG 1 cut(s) 1788
SsiI CCGC 3 cut(s) 538, 1552, 1845
SspI AATATT 1 cut(s) 1654
SspMI CTAG 3 cut(s) 756, 999, 1005
SstI GAGCTC 1 cut(s) 803
StyD4I CCNGG 4 cut(s) 583, 667, 984, 1580
StyI CCWWGG 3 cut(s) 947, 1165, 1668
TaaI ACNGT 8 cut(s) 320, 716, 856, 935, 1145, 1263, 1721, 1885
TaiI ACGT 1 cut(s) 978
TaqI TCGA 4 cut(s) 16, 650, 940, 1041
TatI WGTACW 2 cut(s) 315, 1762
TauI GCSGC 1 cut(s) 1848
TfiI GAWTC 5 cut(s) 18, 890, 1462, 1631, 1736
TseFI GTSAC 5 cut(s) 523, 1066, 1397, 1432, 1811
TseI GCWGC 5 cut(s) 67, 119, 1187, 1218, 1324
Tsp45I GTSAC 5 cut(s) 523, 1066, 1397, 1432, 1811
TspDTI ATGAA 5 cut(s) 240, 984, 1115, 1691, 1764
TspGWI ACGGA 4 cut(s) 889, 1385, 1528, 1855
VpaK11BI GGWCC 6 cut(s) 380, 451, 815, 944, 1289, 1560
XapI RAATTY 4 cut(s) 604, 1491, 1538, 1697
XceI RCATGY 1 cut(s) 299
XmiI GTMKAC 1 cut(s) 1296
XmnI GAANNNNTTC 1 cut(s) 1493
XspI CTAG 3 cut(s) 756, 999, 1005
Zsp2I ATGCAT 2 cut(s) 297, 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.