RLG00000010269

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0005296
Physical Location & Seq
Reverse (-)
64945038 .. 64950796
5759 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010269

Sequence Viewer

Length: 1911 bp
ATGGACGACCAAGATCGAATCGTCTCCACTGGAGAGAGACCTGTTAAGCCAGATGTCTTGAAAGAGCAGCCAGTTTTGCCCAAAGATGAGAGGATAGCTTCAGCAAATCCTTCTTCGGCTGCAGTCATTACAGGGCCTTCACGCACTGCCACAGAACAACCCAAGTTTTCAGATGTTGCAGGAGAACTTAGCACCACCCATCCACTCAATTTGTATGGATCCAATGAACAGAGTTATGGAAGTAGCACTGGTACTTGGGATGGATATCCTCAGTATATCAATACTGATGGAATGCCTGTTGTATCACCGGTAATGTACAGTGATAATCCATCTCTTCTGTATCACTCTGGTTATGGTTTCAATCCCGAAATTGCATATGGACCATATTCACCGGTCGCTACACCTTTGCCTTCTTATTTGGTAGATGGCCAGCTGTACTCTCCACAACAGGTCCCCTACTCTCCATCTTATTACCCTCATCCATCTCCTCCAAGTCTGTCTCATATTACTTCAGCTATTCCAGTGACACCAACCGAGCAGATGACCTCAGAAAGTAGTAGCACTGACAACAGTGCCTTTGGGCCAGGATCAGGTTACTTTGTAAATTTTAGATCATTTAGTGGAGGAGATCTATCTGGAAACTTTGGTTCGAGCCCTTTAGCATCTCCAGGGATTTACCCTCAGCCAATGGGCATACTTGGATCTTACGAACACAGTGTTGGGCAGATTTCTCATCCACAGAGATCAATGCATGGATTTGGACTGGTATCTAGTTCCTTTACAGGGCGCTACCCACATAATACTTCTCATCAGAGCTCCAACTTTGGTGGTCCTTACTCGTTTGGTAATGACCGGAGCCGACTGACTGTTGACAAGGGTAGAAGAAGAGATAGGGACTGGGATTCAATTTCCGTTTTCAGTAATTCACATGATATCTCCAATGACCGTAATCGAGGACCAAGGGCTTCAAAGCTGAAGGACAAGAGCGTGTCTGACCAAGGCTCTTCATCTAGTGCTAGGATAATGGATCTATCTGCTTCTGGAATCAACCTCGACTCAATTAACCGGAAGGATTTTGTTACAGATTATGGGGAGGCAAAGTTCTTTATCATTAAGTCTTTCAGTGAGGATAATGTTCATAAAAGTATTAAATACAGTGTTTGGGCCAGCACTCCCCATGGAAACAAGAAGCTTGATGCTGCTTATCATGAGGCGAAGAGGATAAAAAGCAGCTGTCCAGTCTTTCTCTTATTTTCGGTTAATGCTAGTGGACAGTTTTGCGGAGTAGCTGAAATGATTGAACCAGTAGACTTTGGAAAAGATGCTGATTACTGGCAGCAAGACAGGTGGAATGGCCAATTTAAAGTTCGGTGGCACATTATTAAGGATGTTCCTAACATCCGCTTCCGTCACATTCTACTTGAAAATAATGATAATAAGCCTGTCACTCACAGCCGAGATTGTCAGGAGGTGAATCTGAAACAAGGAATTGAGCTGTTGAAAATTTTCAACGAATATGATGCACGGACATCTATAGTTGATGATTTTGAATTTTATGATGATCGTGAAAGGTCCTTGAAGGAAAGGAAAGCCAGACAACAAGCTTGTGCAACTACAGATGCTTCTGAGTCAGTTGCTCTTGATACTGTTAAGGAAGCTTCTAATATTTCCAATCAAGCCTTGGAGATGAAAGGAAGTAGTAGCAAAGAATTTGCAGGAACTGAACATGACAGTAGCTCCAAAACAGATTCAGTTGTATATGAACATGATGCTGTACAGCAAATATCTGATAGTTTATCTCAAGTATTGCAGTTGGAAGAGAGTGACAAAGAGGTAGTACCACCGTCTGAAAGAGGCGGTACACATGACAGCGAGTCCGTTGACAAGGAGGTAACAGTTGTATCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

637

Amino Acids

70.11

Weight (kDa)

5.37

Isoelectric Point (pI)

50.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 366 - 504 4.7e-50 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1308
AciI CCGC 3 cut(s) 1281, 1402, 1857
AclWI GGATC 5 cut(s) 213, 226, 595, 709, 1035
AcoI YGGCCR 2 cut(s) 427, 1354
AcsI RAATTY 4 cut(s) 604, 1503, 1550, 1709
AcuI CTGAAG 3 cut(s) 84, 495, 995
AfaI GTAC 6 cut(s) 253, 317, 437, 1776, 1839, 1861
AfiI CCNNNNNNNGG 2 cut(s) 590, 783
AgeI ACCGGT 2 cut(s) 307, 391
AhdI GACNNNNNGTC 1 cut(s) 1873
AjnI CCWGG 2 cut(s) 583, 667
AjuI GAANNNNNNNTTGG 4 cut(s) 702, 734, 1350, 1382
AloI GAACNNNNNNTCC 2 cut(s) 1085, 1117
Alw21I GWGCWC 1 cut(s) 818
Alw26I GTCTC 3 cut(s) 28, 31, 504
AlwI GGATC 5 cut(s) 213, 226, 595, 709, 1035
AlwNI CAGNNNCTG 1 cut(s) 1721
AoxI GGCC 5 cut(s) 134, 427, 581, 1164, 1354
ApeKI GCWGC 5 cut(s) 67, 119, 1199, 1230, 1336
ApoI RAATTY 4 cut(s) 604, 1503, 1550, 1709
AsiGI ACCGGT 2 cut(s) 307, 391
Asp700I GAANNNNTTC 1 cut(s) 1505
AspLEI GCGC 1 cut(s) 789
AspS9I GGNCC 8 cut(s) 134, 380, 451, 581, 830, 956, 1164, 1572
AsuHPI GGTGA 3 cut(s) 297, 381, 1483
AvaII GGWCC 5 cut(s) 380, 451, 830, 956, 1572
BaeI ACNNNNGTAYC 1 cut(s) 1884
BalI TGGCCA 2 cut(s) 429, 1356
BamHI GGATCC 1 cut(s) 218
BanII GRGCYC 2 cut(s) 656, 818
Bbv12I GWGCWC 1 cut(s) 818
BbvCI CCTCAGC 1 cut(s) 681
BbvI GCAGC 5 cut(s) 79, 106, 1186, 1242, 1348
BccI CCATC 7 cut(s) 207, 254, 281, 337, 419, 472, 490
BcgI CGANNNNNNTGC 2 cut(s) 1502, 1536
BciT130I CCWGG 2 cut(s) 585, 669
BcoDI GTCTC 3 cut(s) 28, 31, 504
BfaI CTAG 4 cut(s) 771, 1011, 1017, 1266
BfmI CTRYAG 3 cut(s) 120, 1533, 1614
BfoI RGCGCY 1 cut(s) 790
BglII AGATCT 1 cut(s) 628
BisI GCNGC 5 cut(s) 68, 120, 1200, 1231, 1337
BlsI GCNGC 5 cut(s) 69, 121, 1201, 1232, 1338
Bme1390I CCNGG 2 cut(s) 585, 669
Bme18I GGWCC 5 cut(s) 380, 451, 830, 956, 1572
BmeRI GACNNNNNGTC 1 cut(s) 1873
BmgT120I GGNCC 8 cut(s) 134, 380, 451, 581, 830, 956, 1164, 1572
BmiI GGNNCC 3 cut(s) 220, 453, 857
BmrFI CCNGG 2 cut(s) 585, 669
BmrI ACTGGG 1 cut(s) 907
BmsI GCATC 6 cut(s) 671, 1186, 1312, 1510, 1609, 1759
BmuI ACTGGG 1 cut(s) 907
BpmI CTGGAG 2 cut(s) 51, 651
Bpu10I CCTNAGC 1 cut(s) 681
BpuEI CTTGAG 1 cut(s) 1785
BsaBI GATNNNNATC 1 cut(s) 264
BsaI GGTCTC 1 cut(s) 31
BsaJI CCNNGG 5 cut(s) 668, 959, 997, 1177, 1680
BsaWI WCCGGW 4 cut(s) 307, 391, 852, 1065
BsaXI ACNNNNNCTCC 4 cut(s) 1085, 1115, 1721, 1751
Bsc4I CCNNNNNNNGG 2 cut(s) 590, 783
Bse118I RCCGGY 2 cut(s) 307, 391
Bse1I ACTGG 9 cut(s) 34, 71, 253, 521, 768, 902, 1238, 1304, 1337
Bse8I GATNNNNATC 1 cut(s) 264
BseBI CCWGG 2 cut(s) 585, 669
BseDI CCNNGG 5 cut(s) 668, 959, 997, 1177, 1680
BseGI GGATG 6 cut(s) 199, 265, 478, 733, 1393, 1398
BseJI GATNNNNATC 1 cut(s) 264
BseLI CCNNNNNNNGG 2 cut(s) 590, 783
BseMII CTCAG 4 cut(s) 284, 561, 695, 1617
BseNI ACTGG 9 cut(s) 34, 71, 253, 521, 768, 902, 1238, 1304, 1337
BseRI GAGGAG 2 cut(s) 477, 639
BseXI GCAGC 5 cut(s) 79, 106, 1186, 1242, 1348
Bsh1285I CGRYCG 1 cut(s) 396
BshFI GGCC 5 cut(s) 136, 429, 583, 1166, 1356
BshTI ACCGGT 2 cut(s) 307, 391
BsiEI CGRYCG 1 cut(s) 396
BsiHKAI GWGCWC 1 cut(s) 818
BsiSI CCGG 4 cut(s) 308, 392, 853, 1066
BslFI GGGAC 2 cut(s) 437, 908
BslI CCNNNNNNNGG 2 cut(s) 590, 783
BsmAI GTCTC 3 cut(s) 28, 31, 504
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 2 cut(s) 437, 908
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 5 cut(s) 136, 429, 583, 1166, 1356
Bso31I GGTCTC 1 cut(s) 31
Bsp1286I GDGCHC 2 cut(s) 656, 818
Bsp1407I TGTACA 2 cut(s) 315, 1774
Bsp143I GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1027, 1561
Bsp19I CCATGG 1 cut(s) 1177
BspACI CCGC 3 cut(s) 1281, 1402, 1857
BspANI GGCC 5 cut(s) 136, 429, 583, 1166, 1356
BspCNI CTCAG 4 cut(s) 283, 560, 694, 1618
BspHI TCATGA 1 cut(s) 1207
BspLI GGNNCC 3 cut(s) 220, 453, 857
BspMAI CTGCAG 1 cut(s) 124
BspPI GGATC 5 cut(s) 213, 226, 595, 709, 1035
BspQI GCTCTTC 1 cut(s) 1009
BspTNI GGTCTC 1 cut(s) 31
BsrFI RCCGGY 2 cut(s) 307, 391
BsrGI TGTACA 2 cut(s) 315, 1774
BsrI ACTGG 9 cut(s) 34, 71, 253, 521, 768, 902, 1238, 1304, 1337
BssAI RCCGGY 2 cut(s) 307, 391
BssECI CCNNGG 5 cut(s) 668, 959, 997, 1177, 1680
BssMI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1027, 1561
BssT1I CCWWGG 4 cut(s) 959, 997, 1177, 1680
Bst2UI CCWGG 2 cut(s) 585, 669
Bst6I CTCTTC 5 cut(s) 339, 880, 1009, 1211, 1812
BstAUI TGTACA 2 cut(s) 315, 1774
BstC8I GCNNGC 2 cut(s) 431, 1168
BstDEI CTNAG 5 cut(s) 188, 270, 547, 681, 1626
BstDSI CCRYGG 1 cut(s) 1177
BstF5I GGATG 6 cut(s) 199, 265, 478, 733, 1393, 1398
BstH2I RGCGCY 1 cut(s) 790
BstHHI GCGC 1 cut(s) 789
BstKTI GATC 9 cut(s) 16, 221, 590, 614, 631, 704, 746, 1030, 1564
BstMAI GTCTC 3 cut(s) 28, 31, 504
BstMBI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1027, 1561
BstMCI CGRYCG 1 cut(s) 396
BstMWI GCNNNNNNNGC 1 cut(s) 76
BstNI CCWGG 2 cut(s) 585, 669
BstSCI CCNGG 2 cut(s) 583, 667
BstSFI CTRYAG 3 cut(s) 120, 1533, 1614
BstV1I GCAGC 5 cut(s) 79, 106, 1186, 1242, 1348
BstX2I RGATCY 4 cut(s) 218, 628, 701, 1027
BstYI RGATCY 4 cut(s) 218, 628, 701, 1027
BsuRI GGCC 5 cut(s) 136, 429, 583, 1166, 1356
BtgI CCRYGG 1 cut(s) 1177
BtsCI GGATG 6 cut(s) 199, 265, 478, 733, 1393, 1398
BtsI GCAGTG 1 cut(s) 144
Cac8I GCNNGC 2 cut(s) 431, 1168
CaiI CAGNNNCTG 1 cut(s) 1721
CciI TCATGA 1 cut(s) 1207
CfoI GCGC 1 cut(s) 789
Cfr10I RCCGGY 2 cut(s) 307, 391
Cfr13I GGNCC 8 cut(s) 134, 380, 451, 581, 830, 956, 1164, 1572
Csp6I GTAC 6 cut(s) 252, 316, 436, 1775, 1838, 1860
CspAI ACCGGT 2 cut(s) 307, 391
CspCI CAANNNNNGTGG 6 cut(s) 192, 227, 808, 843, 1328, 1363
CviAII CATG 7 cut(s) 752, 929, 1178, 1208, 1727, 1766, 1865
CviQI GTAC 6 cut(s) 252, 316, 436, 1775, 1838, 1860
DdeI CTNAG 5 cut(s) 188, 270, 547, 681, 1626
DpnI GATC 9 cut(s) 15, 220, 589, 613, 630, 703, 745, 1029, 1563
DpnII GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1027, 1561
DraI TTTAAA 1 cut(s) 1363
DriI GACNNNNNGTC 1 cut(s) 1873
EaeI YGGCCR 2 cut(s) 427, 1354
Eam1104I CTCTTC 5 cut(s) 339, 880, 1009, 1211, 1812
Eam1105I GACNNNNNGTC 1 cut(s) 1873
EarI CTCTTC 5 cut(s) 339, 880, 1009, 1211, 1812
Ecl136II GAGCTC 1 cut(s) 816
Eco130I CCWWGG 4 cut(s) 959, 997, 1177, 1680
Eco24I GRGCYC 2 cut(s) 656, 818
Eco31I GGTCTC 1 cut(s) 31
Eco32I GATATC 2 cut(s) 266, 934
Eco47I GGWCC 5 cut(s) 380, 451, 830, 956, 1572
Eco53kI GAGCTC 1 cut(s) 816
Eco57I CTGAAG 3 cut(s) 84, 495, 995
EcoICRI GAGCTC 1 cut(s) 816
EcoO109I RGGNCCY 3 cut(s) 134, 451, 1572
EcoRII CCWGG 2 cut(s) 583, 667
EcoRV GATATC 2 cut(s) 266, 934
EcoT14I CCWWGG 4 cut(s) 959, 997, 1177, 1680
EcoT22I ATGCAT 1 cut(s) 753
EcoT38I GRGCYC 2 cut(s) 656, 818
ErhI CCWWGG 4 cut(s) 959, 997, 1177, 1680
Esp3I CGTCTC 1 cut(s) 28
FaeI CATG 7 cut(s) 755, 932, 1181, 1211, 1730, 1769, 1868
FaqI GGGAC 2 cut(s) 437, 908
FatI CATG 7 cut(s) 751, 928, 1177, 1207, 1726, 1765, 1864
FauNDI CATATG 1 cut(s) 376
FblI GTMKAC 1 cut(s) 1308
Fnu4HI GCNGC 5 cut(s) 68, 120, 1200, 1231, 1337
FokI GGATG 6 cut(s) 186, 272, 465, 720, 1385, 1400
FriOI GRGCYC 2 cut(s) 656, 818
Fsp4HI GCNGC 5 cut(s) 68, 120, 1200, 1231, 1337
FspBI CTAG 4 cut(s) 771, 1011, 1017, 1266
GlaI GCGC 1 cut(s) 788
GluI GCNGC 5 cut(s) 68, 120, 1200, 1231, 1337
GsuI CTGGAG 2 cut(s) 51, 651
HaeII RGCGCY 1 cut(s) 790
HaeIII GGCC 5 cut(s) 136, 429, 583, 1166, 1356
HapII CCGG 4 cut(s) 308, 392, 853, 1066
HhaI GCGC 1 cut(s) 789
Hin1II CATG 7 cut(s) 755, 932, 1181, 1211, 1730, 1769, 1868
Hin6I GCGC 1 cut(s) 787
HinP1I GCGC 1 cut(s) 787
HincII GTYRAC 2 cut(s) 871, 1882
HindII GTYRAC 2 cut(s) 871, 1882
HindIII AAGCTT 3 cut(s) 1190, 1602, 1656
HinfI GANTC 8 cut(s) 18, 902, 1044, 1055, 1474, 1628, 1748, 1874
HpaII CCGG 4 cut(s) 308, 392, 853, 1066
HphI GGTGA 3 cut(s) 297, 381, 1483
Hpy166II GTNNAC 5 cut(s) 871, 1271, 1309, 1862, 1882
Hpy188I TCNGA 8 cut(s) 172, 550, 813, 994, 1479, 1627, 1789, 1849
Hpy188III TCNNGA 8 cut(s) 58, 365, 636, 1041, 1208, 1466, 1565, 1640
Hpy8I GTNNAC 5 cut(s) 871, 1271, 1309, 1862, 1882
HpyAV CCTTC 6 cut(s) 120, 147, 420, 970, 1063, 1573
HpyCH4V TGCA 8 cut(s) 122, 179, 374, 751, 1523, 1610, 1715, 1810
HpyF10VI GCNNNNNNNGC 1 cut(s) 76
HpyF3I CTNAG 5 cut(s) 188, 270, 547, 681, 1626
Hsp92II CATG 7 cut(s) 755, 932, 1181, 1211, 1730, 1769, 1868
HspAI GCGC 1 cut(s) 787
Kzo9I GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1027, 1561
LguI GCTCTTC 1 cut(s) 1009
LmnI GCTCC 3 cut(s) 821, 855, 1742
Lsp1109I GCAGC 5 cut(s) 79, 106, 1186, 1242, 1348
LweI GCATC 6 cut(s) 671, 1186, 1312, 1510, 1609, 1759
MaeI CTAG 4 cut(s) 771, 1011, 1017, 1266
MaeIII GTNAC 7 cut(s) 523, 593, 1078, 1409, 1444, 1823, 1891
MalI GATC 9 cut(s) 15, 220, 589, 613, 630, 703, 745, 1029, 1563
MboI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1027, 1561
MboII GAAGA 7 cut(s) 105, 326, 894, 897, 996, 1228, 1829
MflI RGATCY 4 cut(s) 218, 628, 701, 1027
MhlI GDGCHC 2 cut(s) 656, 818
MlsI TGGCCA 2 cut(s) 429, 1356
MluNI TGGCCA 2 cut(s) 429, 1356
MlyI GAGTC 3 cut(s) 1049, 1637, 1883
MmeI TCCRAC 2 cut(s) 843, 1794
Mox20I TGGCCA 2 cut(s) 429, 1356
Mph1103I ATGCAT 1 cut(s) 753
MroXI GAANNNNTTC 1 cut(s) 1505
MscI TGGCCA 2 cut(s) 429, 1356
MseI TTAA 9 cut(s) 45, 1062, 1113, 1149, 1260, 1362, 1383, 1650, 1909
Msp20I TGGCCA 2 cut(s) 429, 1356
MspA1I CMGCKG 2 cut(s) 433, 1233
MspI CCGG 4 cut(s) 308, 392, 853, 1066
MspR9I CCNGG 2 cut(s) 585, 669
Mva1269I GAATGC 1 cut(s) 297
MvaI CCWGG 2 cut(s) 585, 669
MwoI GCNNNNNNNGC 1 cut(s) 76
NcoI CCATGG 1 cut(s) 1177
NdeI CATATG 1 cut(s) 376
NdeII GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1027, 1561
NlaIII CATG 7 cut(s) 755, 932, 1181, 1211, 1730, 1769, 1868
NlaIV GGNNCC 3 cut(s) 220, 453, 857
NmeAIII GCCGAG 1 cut(s) 1481
NmuCI GTSAC 4 cut(s) 523, 1409, 1444, 1823
NsiI ATGCAT 1 cut(s) 753
PagI TCATGA 1 cut(s) 1207
PciSI GCTCTTC 1 cut(s) 1009
PctI GAATGC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 1505
PfeI GAWTC 5 cut(s) 18, 902, 1044, 1474, 1748
PinAI ACCGGT 2 cut(s) 307, 391
PkrI GCNGC 5 cut(s) 69, 121, 1201, 1232, 1338
PleI GAGTC 3 cut(s) 1049, 1636, 1882
PpsI GAGTC 3 cut(s) 1049, 1636, 1882
PpuMI RGGWCCY 2 cut(s) 451, 1572
Psp124BI GAGCTC 1 cut(s) 818
Psp5II RGGWCCY 2 cut(s) 451, 1572
Psp6I CCWGG 2 cut(s) 583, 667
PspGI CCWGG 2 cut(s) 583, 667
PspN4I GGNNCC 3 cut(s) 220, 453, 857
PspPI GGNCC 8 cut(s) 134, 380, 451, 581, 830, 956, 1164, 1572
PspPPI RGGWCCY 2 cut(s) 451, 1572
PstI CTGCAG 1 cut(s) 124
PstNI CAGNNNCTG 1 cut(s) 1721
PsuI RGATCY 4 cut(s) 218, 628, 701, 1027
PvuII CAGCTG 2 cut(s) 433, 1233
RsaI GTAC 6 cut(s) 253, 317, 437, 1776, 1839, 1861
RsaNI GTAC 6 cut(s) 252, 316, 436, 1775, 1838, 1860
SacI GAGCTC 1 cut(s) 818
SapI GCTCTTC 1 cut(s) 1009
SaqAI TTAA 9 cut(s) 45, 1062, 1113, 1149, 1260, 1362, 1383, 1650, 1909
SatI GCNGC 5 cut(s) 68, 120, 1200, 1231, 1337
Sau3AI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1027, 1561
Sau96I GGNCC 8 cut(s) 134, 380, 451, 581, 830, 956, 1164, 1572
SchI GAGTC 3 cut(s) 1049, 1637, 1883
ScrFI CCNGG 2 cut(s) 585, 669
SduI GDGCHC 2 cut(s) 656, 818
SfaNI GCATC 6 cut(s) 671, 1186, 1312, 1510, 1609, 1759
SfcI CTRYAG 3 cut(s) 120, 1533, 1614
SinI GGWCC 5 cut(s) 380, 451, 830, 956, 1572
SmlI CTYRAG 1 cut(s) 1800
SmoI CTYRAG 1 cut(s) 1800
SsiI CCGC 3 cut(s) 1281, 1402, 1857
SspI AATATT 1 cut(s) 1666
SspMI CTAG 4 cut(s) 771, 1011, 1017, 1266
SstI GAGCTC 1 cut(s) 818
StyD4I CCNGG 2 cut(s) 583, 667
StyI CCWWGG 4 cut(s) 959, 997, 1177, 1680
TaqI TCGA 4 cut(s) 16, 650, 952, 1053
TatI WGTACW 3 cut(s) 315, 435, 1774
TfiI GAWTC 5 cut(s) 18, 902, 1044, 1474, 1748
Tru1I TTAA 9 cut(s) 45, 1062, 1113, 1149, 1260, 1362, 1383, 1650, 1909
Tru9I TTAA 9 cut(s) 45, 1062, 1113, 1149, 1260, 1362, 1383, 1650, 1909
TseFI GTSAC 4 cut(s) 523, 1409, 1444, 1823
TseI GCWGC 5 cut(s) 67, 119, 1199, 1230, 1336
Tsp45I GTSAC 4 cut(s) 523, 1409, 1444, 1823
TspDTI ATGAA 5 cut(s) 240, 996, 1127, 1703, 1776
TspGWI ACGGA 4 cut(s) 901, 1397, 1540, 1867
VpaK11BI GGWCC 5 cut(s) 380, 451, 830, 956, 1572
XapI RAATTY 4 cut(s) 604, 1503, 1550, 1709
XcmI CCANNNNNNNNNTGG 1 cut(s) 1678
XmiI GTMKAC 1 cut(s) 1308
XmnI GAANNNNTTC 1 cut(s) 1505
XspI CTAG 4 cut(s) 771, 1011, 1017, 1266
Zsp2I ATGCAT 1 cut(s) 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.