Rw4G000760

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0005296
Physical Location & Seq
Reverse (-)
1525839 .. 1531293
5455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G000760.1

Sequence Viewer

Length: 1929 bp
ATGGACGACCAAGATCGAATCGTCTCCACTGGAGAGAGACCTGTTAAGCCAGATGTCTTGAAAGAGCAGCCAGTTTTGCCCAAAGATGAGAGGATAGCTTCAGCAAATCCTTCTCCGGCTGCAGTCATTCCAGGGCCTTCACGCACTGCCACAGAACAACCCAAGTTTTCAGATGTTGCAGGAGAACTTAGCACCACCTATCCACTCAATTTGTATGGATCCAATGAACAGAGTATGTCTTATAGTGGTTATGGAAGTAGCAGTGGTACTTGGGATGGATATCCTCAGTATATCAATACTGATGGAATGCATGTTGTATCACCGGTAATGTACAGTGATAATCCATCTCTTCTGTATCACTCTGGTTATGGTTTCAATCCCGAAATTACATATGGACCATATTCACCGGTTGCTACACCTTTGGCTTCTTATTTGGTAGATGGCCAGCTCTATTCTCCACAACAGGTCCCCTTCTCTCCATCTTATTACCCTCAACCATCTCCTCCAAGTCTGTCTCATATTACTTCAGCTATTCCAGTGACACCAACTGAGCGGATGACCTCAGAAAGTAGTAGCACTGACAACATGGCCTTTGGGCCAGGATCAGGTTACTTTGTAAATTTTAGATCATTTAGTGGAGGAGATCTAGCTGGAAATCTTGGTTCGAGCCCTTTAGCATCTCCAGGGATTTACCCTCAGCCAATGGGCATACTTGGATCTTATGAGCACAGTGTTGGGCAGATTTCTCATCCACAGAGATCAATGCATGGATTTGGACTGGTATCTAGTTCCTTTACAGGGCGCTACCCACATAATACTTCTCATCAGAGCTCCAACTTTGGTGGTCCTTCTTACTCGTTTGGTAATGACCGGAGCCGACTGACTGTTGACAAGGGTAGAAGAAGAGATAGGGAGTGGGATTCAATTTCAGTTTTCAGTAATTCACATGATATCTCCAATGACCGTAATCGAGGACCAAGGGCTTCAAAGCTGAAGGACAAGAACGTGTCTGACCAGGGCTCTTCATCTAGTACTAGGAAAATGGATCTATCTGCTTCTGGAATTAACCTCGACTCAATTAACAGGAAGGATTTTGTCACAGATTATGAGGAGGCAAAGTTCTTTATCATTAAGTCTTTCAGTGAGGATAATGTTCATAAAAGTATTAAATACAGTGTTTGGGCCAGCACTCCCCATGGAAACAAAAAGCTTGATGCTGCTTATCATGAGGCGAAGAGGATAAAAAGCAGCTGTCCAGTCTTTCTCTTATTTTCGGTTAATGCCAGTGGACAGTTTTGCGGAGTAGCCGAAATGATTGGACCAGTAGACTTTGGAAAAGATGCTGATTACTGGCAGCAAGACAGGTGGAATGGCCAATTTAAAGTTCAGTGGCACATTATTAAGGATGTTCCTAACGTTCGCTTCCGTCACATTCTACTTGAAAATAATGATAATAAGCCTGTCACTCACAGCCGAGATTGTCAGGAGGTGAATCTGAAACAAGGAATTGAGCTGTTGAAAATTTTCAATGATTATGATGCACGGACATCTATAGTTGATGATTTTGAATTTTATGATGACCGCGAAAGGTCCTTGAAGGAAAGGAAAGCCAGACAACAAGCTTGTGCAACTACAGATGCTTCTGAGTCAGTTGCTCTTGATACTGTTAAGGAAGCTTCTAATATTTCCGATCAAGCCTTGGAGATGAAAGGAAGTAGTAGCAAAGAATTTGCAGGAACTGAACAAGACAGTAGCTCCAAAACAGATTCAGTTGTATATGAACATGATGCTGTACAGCAAATATCTGATAGTTTATCTCAAGTATTGCAGTTGGAAGAGAGTGACAAAGAGGTAGTACCACCATCTGAAAGAGGCGGTACACATGACAGCGAGTCCGTTGACATGGAGGTAACAGTTGTATCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

642

Amino Acids

70.8

Weight (kDa)

5.24

Isoelectric Point (pI)

51.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 372 - 510 3.4e-50 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 553
AccI GTMKAC 1 cut(s) 1326
AccII CGCG 1 cut(s) 1584
AciI CCGC 4 cut(s) 553, 1299, 1582, 1875
AclI AACGTT 1 cut(s) 1416
AclWI GGATC 5 cut(s) 213, 226, 610, 724, 1053
AcoI YGGCCR 2 cut(s) 442, 1372
AcsI RAATTY 4 cut(s) 619, 1521, 1568, 1727
AcuI CTGAAG 3 cut(s) 84, 510, 1013
AfaI GTAC 6 cut(s) 268, 332, 1033, 1794, 1857, 1879
AfiI CCNNNNNNNGG 2 cut(s) 605, 798
AflIII ACRYGT 1 cut(s) 1005
AgeI ACCGGT 2 cut(s) 322, 406
AgsI TTSAA 9 cut(s) 61, 376, 924, 987, 1442, 1519, 1528, 1568, 1597
AhdI GACNNNNNGTC 1 cut(s) 1891
AjnI CCWGG 4 cut(s) 130, 598, 682, 1014
AjuI GAANNNNNNNTTGG 2 cut(s) 1368, 1400
AloI GAACNNNNNNTCC 2 cut(s) 1103, 1135
Alw21I GWGCWC 2 cut(s) 729, 833
Alw26I GTCTC 3 cut(s) 28, 31, 519
AlwI GGATC 5 cut(s) 213, 226, 610, 724, 1053
AlwNI CAGNNNCTG 1 cut(s) 1739
AoxI GGCC 6 cut(s) 134, 442, 588, 596, 1182, 1372
ApeKI GCWGC 5 cut(s) 67, 119, 1217, 1248, 1354
ApoI RAATTY 4 cut(s) 619, 1521, 1568, 1727
AsiGI ACCGGT 2 cut(s) 322, 406
Asp700I GAANNNNTTC 1 cut(s) 1523
AspLEI GCGC 1 cut(s) 804
AspS9I GGNCC 9 cut(s) 134, 395, 466, 596, 845, 974, 1182, 1319, 1590
AsuHPI GGTGA 3 cut(s) 312, 396, 1501
AvaII GGWCC 6 cut(s) 395, 466, 845, 974, 1319, 1590
BaeI ACNNNNGTAYC 1 cut(s) 1902
BalI TGGCCA 2 cut(s) 444, 1374
BamHI GGATCC 1 cut(s) 218
BanII GRGCYC 3 cut(s) 671, 833, 1022
Bbv12I GWGCWC 2 cut(s) 729, 833
BbvCI CCTCAGC 1 cut(s) 696
BbvI GCAGC 5 cut(s) 79, 106, 1204, 1260, 1366
BccI CCATC 7 cut(s) 269, 296, 352, 434, 487, 505, 1870
BciT130I CCWGG 4 cut(s) 132, 600, 684, 1016
BcoDI GTCTC 3 cut(s) 28, 31, 519
BfaI CTAG 4 cut(s) 647, 786, 1029, 1035
BfmI CTRYAG 3 cut(s) 120, 1551, 1632
BfoI RGCGCY 1 cut(s) 805
BglII AGATCT 1 cut(s) 643
BisI GCNGC 5 cut(s) 68, 120, 1218, 1249, 1355
BlsI GCNGC 5 cut(s) 69, 121, 1219, 1250, 1356
BmcAI AGTACT 1 cut(s) 1033
Bme1390I CCNGG 4 cut(s) 132, 600, 684, 1016
Bme18I GGWCC 6 cut(s) 395, 466, 845, 974, 1319, 1590
BmeRI GACNNNNNGTC 1 cut(s) 1891
BmgT120I GGNCC 9 cut(s) 134, 395, 466, 596, 845, 974, 1182, 1319, 1590
BmiI GGNNCC 3 cut(s) 220, 468, 875
BmrFI CCNGG 4 cut(s) 132, 600, 684, 1016
BmsI GCATC 6 cut(s) 686, 1204, 1330, 1528, 1627, 1777
BpmI CTGGAG 2 cut(s) 51, 666
Bpu10I CCTNAGC 1 cut(s) 696
BpuEI CTTGAG 1 cut(s) 1803
BsaBI GATNNNNATC 1 cut(s) 279
BsaI GGTCTC 1 cut(s) 31
BsaJI CCNNGG 6 cut(s) 131, 683, 977, 1015, 1195, 1698
BsaWI WCCGGW 3 cut(s) 322, 406, 870
BsaXI ACNNNNNCTCC 4 cut(s) 1103, 1133, 1739, 1769
Bsc4I CCNNNNNNNGG 2 cut(s) 605, 798
Bse118I RCCGGY 2 cut(s) 322, 406
Bse1I ACTGG 8 cut(s) 34, 71, 536, 783, 1256, 1284, 1322, 1355
Bse8I GATNNNNATC 1 cut(s) 279
BseBI CCWGG 4 cut(s) 132, 600, 684, 1016
BseDI CCNNGG 6 cut(s) 131, 683, 977, 1015, 1195, 1698
BseGI GGATG 4 cut(s) 280, 561, 748, 1411
BseJI GATNNNNATC 1 cut(s) 279
BseLI CCNNNNNNNGG 2 cut(s) 605, 798
BseMII CTCAG 5 cut(s) 299, 540, 576, 710, 1635
BseNI ACTGG 8 cut(s) 34, 71, 536, 783, 1256, 1284, 1322, 1355
BseRI GAGGAG 3 cut(s) 492, 654, 1124
BseXI GCAGC 5 cut(s) 79, 106, 1204, 1260, 1366
Bsh1236I CGCG 1 cut(s) 1584
BshFI GGCC 6 cut(s) 136, 444, 590, 598, 1184, 1374
BshTI ACCGGT 2 cut(s) 322, 406
BsiHKAI GWGCWC 2 cut(s) 729, 833
BsiSI CCGG 4 cut(s) 116, 323, 407, 871
BslFI GGGAC 1 cut(s) 452
BslI CCNNNNNNNGG 2 cut(s) 605, 798
BsmAI GTCTC 3 cut(s) 28, 31, 519
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 1 cut(s) 452
BsmI GAATGC 1 cut(s) 312
BsnI GGCC 6 cut(s) 136, 444, 590, 598, 1184, 1374
Bso31I GGTCTC 1 cut(s) 31
Bsp1286I GDGCHC 4 cut(s) 671, 729, 833, 1022
Bsp1407I TGTACA 2 cut(s) 330, 1792
Bsp143I GATC 9 cut(s) 13, 218, 602, 626, 643, 716, 758, 1045, 1690
Bsp19I CCATGG 1 cut(s) 1195
BspACI CCGC 4 cut(s) 553, 1299, 1582, 1875
BspANI GGCC 6 cut(s) 136, 444, 590, 598, 1184, 1374
BspCNI CTCAG 5 cut(s) 298, 541, 575, 709, 1636
BspFNI CGCG 1 cut(s) 1584
BspHI TCATGA 1 cut(s) 1225
BspLI GGNNCC 3 cut(s) 220, 468, 875
BspMAI CTGCAG 1 cut(s) 124
BspPI GGATC 5 cut(s) 213, 226, 610, 724, 1053
BspQI GCTCTTC 1 cut(s) 1027
BspTNI GGTCTC 1 cut(s) 31
BsrBI CCGCTC 1 cut(s) 553
BsrFI RCCGGY 2 cut(s) 322, 406
BsrGI TGTACA 2 cut(s) 330, 1792
BsrI ACTGG 8 cut(s) 34, 71, 536, 783, 1256, 1284, 1322, 1355
BssAI RCCGGY 2 cut(s) 322, 406
BssECI CCNNGG 6 cut(s) 131, 683, 977, 1015, 1195, 1698
BssMI GATC 9 cut(s) 13, 218, 602, 626, 643, 716, 758, 1045, 1690
BssT1I CCWWGG 3 cut(s) 977, 1195, 1698
Bst2UI CCWGG 4 cut(s) 132, 600, 684, 1016
Bst4CI ACNGT 9 cut(s) 335, 731, 886, 965, 1175, 1293, 1666, 1751, 1915
Bst6I CTCTTC 5 cut(s) 354, 898, 1027, 1229, 1830
BstAUI TGTACA 2 cut(s) 330, 1792
BstC8I GCNNGC 2 cut(s) 446, 1186
BstDEI CTNAG 6 cut(s) 188, 285, 549, 562, 696, 1644
BstDSI CCRYGG 1 cut(s) 1195
BstF5I GGATG 4 cut(s) 280, 561, 748, 1411
BstFNI CGCG 1 cut(s) 1584
BstH2I RGCGCY 1 cut(s) 805
BstHHI GCGC 1 cut(s) 804
BstKTI GATC 9 cut(s) 16, 221, 605, 629, 646, 719, 761, 1048, 1693
BstMAI GTCTC 3 cut(s) 28, 31, 519
BstMBI GATC 9 cut(s) 13, 218, 602, 626, 643, 716, 758, 1045, 1690
BstMWI GCNNNNNNNGC 1 cut(s) 76
BstNI CCWGG 4 cut(s) 132, 600, 684, 1016
BstNSI RCATGY 1 cut(s) 314
BstSCI CCNGG 4 cut(s) 130, 598, 682, 1014
BstSFI CTRYAG 3 cut(s) 120, 1551, 1632
BstUI CGCG 1 cut(s) 1584
BstV1I GCAGC 5 cut(s) 79, 106, 1204, 1260, 1366
BstX2I RGATCY 4 cut(s) 218, 643, 716, 1045
BstYI RGATCY 4 cut(s) 218, 643, 716, 1045
BsuRI GGCC 6 cut(s) 136, 444, 590, 598, 1184, 1374
BtgI CCRYGG 1 cut(s) 1195
BtsCI GGATG 4 cut(s) 280, 561, 748, 1411
BtsI GCAGTG 2 cut(s) 144, 268
Cac8I GCNNGC 2 cut(s) 446, 1186
CaiI CAGNNNCTG 1 cut(s) 1739
CciI TCATGA 1 cut(s) 1225
CfoI GCGC 1 cut(s) 804
Cfr10I RCCGGY 2 cut(s) 322, 406
Cfr13I GGNCC 9 cut(s) 134, 395, 466, 596, 845, 974, 1182, 1319, 1590
Csp6I GTAC 6 cut(s) 267, 331, 1032, 1793, 1856, 1878
CspAI ACCGGT 2 cut(s) 322, 406
CspCI CAANNNNNGTGG 6 cut(s) 192, 227, 823, 858, 1346, 1381
CviAII CATG 9 cut(s) 311, 586, 767, 947, 1196, 1226, 1784, 1883, 1903
CviQI GTAC 6 cut(s) 267, 331, 1032, 1793, 1856, 1878
DdeI CTNAG 6 cut(s) 188, 285, 549, 562, 696, 1644
DpnI GATC 9 cut(s) 15, 220, 604, 628, 645, 718, 760, 1047, 1692
DpnII GATC 9 cut(s) 13, 218, 602, 626, 643, 716, 758, 1045, 1690
DraI TTTAAA 1 cut(s) 1381
DriI GACNNNNNGTC 1 cut(s) 1891
EaeI YGGCCR 2 cut(s) 442, 1372
Eam1104I CTCTTC 5 cut(s) 354, 898, 1027, 1229, 1830
Eam1105I GACNNNNNGTC 1 cut(s) 1891
EarI CTCTTC 5 cut(s) 354, 898, 1027, 1229, 1830
Ecl136II GAGCTC 1 cut(s) 831
Eco130I CCWWGG 3 cut(s) 977, 1195, 1698
Eco24I GRGCYC 3 cut(s) 671, 833, 1022
Eco31I GGTCTC 1 cut(s) 31
Eco32I GATATC 2 cut(s) 281, 952
Eco47I GGWCC 6 cut(s) 395, 466, 845, 974, 1319, 1590
Eco53kI GAGCTC 1 cut(s) 831
Eco57I CTGAAG 3 cut(s) 84, 510, 1013
EcoICRI GAGCTC 1 cut(s) 831
EcoO109I RGGNCCY 3 cut(s) 134, 466, 1590
EcoRII CCWGG 4 cut(s) 130, 598, 682, 1014
EcoRV GATATC 2 cut(s) 281, 952
EcoT14I CCWWGG 3 cut(s) 977, 1195, 1698
EcoT22I ATGCAT 2 cut(s) 312, 768
EcoT38I GRGCYC 3 cut(s) 671, 833, 1022
ErhI CCWWGG 3 cut(s) 977, 1195, 1698
Esp3I CGTCTC 1 cut(s) 28
FaeI CATG 9 cut(s) 314, 589, 770, 950, 1199, 1229, 1787, 1886, 1906
FaqI GGGAC 1 cut(s) 452
FatI CATG 9 cut(s) 310, 585, 766, 946, 1195, 1225, 1783, 1882, 1902
FauNDI CATATG 1 cut(s) 391
FblI GTMKAC 1 cut(s) 1326
Fnu4HI GCNGC 5 cut(s) 68, 120, 1218, 1249, 1355
FokI GGATG 4 cut(s) 287, 568, 735, 1418
FriOI GRGCYC 3 cut(s) 671, 833, 1022
Fsp4HI GCNGC 5 cut(s) 68, 120, 1218, 1249, 1355
FspBI CTAG 4 cut(s) 647, 786, 1029, 1035
GlaI GCGC 1 cut(s) 803
GluI GCNGC 5 cut(s) 68, 120, 1218, 1249, 1355
GsuI CTGGAG 2 cut(s) 51, 666
HaeII RGCGCY 1 cut(s) 805
HaeIII GGCC 6 cut(s) 136, 444, 590, 598, 1184, 1374
HapII CCGG 4 cut(s) 116, 323, 407, 871
HhaI GCGC 1 cut(s) 804
Hin1II CATG 9 cut(s) 314, 589, 770, 950, 1199, 1229, 1787, 1886, 1906
Hin6I GCGC 1 cut(s) 802
HinP1I GCGC 1 cut(s) 802
HincII GTYRAC 2 cut(s) 889, 1900
HindII GTYRAC 2 cut(s) 889, 1900
HindIII AAGCTT 3 cut(s) 1208, 1620, 1674
HinfI GANTC 7 cut(s) 18, 920, 1073, 1492, 1646, 1766, 1892
HpaII CCGG 4 cut(s) 116, 323, 407, 871
HphI GGTGA 3 cut(s) 312, 396, 1501
Hpy166II GTNNAC 5 cut(s) 889, 1289, 1327, 1880, 1900
Hpy188I TCNGA 9 cut(s) 172, 565, 828, 1012, 1497, 1645, 1690, 1807, 1867
Hpy188III TCNNGA 6 cut(s) 58, 380, 1059, 1226, 1484, 1658
Hpy8I GTNNAC 5 cut(s) 889, 1289, 1327, 1880, 1900
HpyAV CCTTC 7 cut(s) 120, 147, 481, 858, 988, 1081, 1591
HpyCH4III ACNGT 9 cut(s) 335, 731, 886, 965, 1175, 1293, 1666, 1751, 1915
HpyCH4IV ACGT 2 cut(s) 1005, 1416
HpyCH4V TGCA 8 cut(s) 122, 179, 310, 766, 1541, 1628, 1733, 1828
HpyF10VI GCNNNNNNNGC 1 cut(s) 76
HpyF3I CTNAG 6 cut(s) 188, 285, 549, 562, 696, 1644
HpySE526I ACGT 2 cut(s) 1005, 1416
Hsp92II CATG 9 cut(s) 314, 589, 770, 950, 1199, 1229, 1787, 1886, 1906
HspAI GCGC 1 cut(s) 802
Kzo9I GATC 9 cut(s) 13, 218, 602, 626, 643, 716, 758, 1045, 1690
LguI GCTCTTC 1 cut(s) 1027
LmnI GCTCC 3 cut(s) 836, 873, 1760
Lsp1109I GCAGC 5 cut(s) 79, 106, 1204, 1260, 1366
LweI GCATC 6 cut(s) 686, 1204, 1330, 1528, 1627, 1777
MaeI CTAG 4 cut(s) 647, 786, 1029, 1035
MaeII ACGT 2 cut(s) 1005, 1416
MaeIII GTNAC 7 cut(s) 538, 608, 1096, 1427, 1462, 1841, 1909
MalI GATC 9 cut(s) 15, 220, 604, 628, 645, 718, 760, 1047, 1692
MbiI CCGCTC 1 cut(s) 553
MboI GATC 9 cut(s) 13, 218, 602, 626, 643, 716, 758, 1045, 1690
MboII GAAGA 6 cut(s) 341, 912, 915, 1014, 1246, 1847
MflI RGATCY 4 cut(s) 218, 643, 716, 1045
MhlI GDGCHC 4 cut(s) 671, 729, 833, 1022
MlsI TGGCCA 2 cut(s) 444, 1374
MluNI TGGCCA 2 cut(s) 444, 1374
MlyI GAGTC 3 cut(s) 1067, 1655, 1901
MmeI TCCRAC 2 cut(s) 858, 1812
Mox20I TGGCCA 2 cut(s) 444, 1374
Mph1103I ATGCAT 2 cut(s) 312, 768
MroXI GAANNNNTTC 1 cut(s) 1523
MscI TGGCCA 2 cut(s) 444, 1374
Msp20I TGGCCA 2 cut(s) 444, 1374
MspA1I CMGCKG 1 cut(s) 1251
MspI CCGG 4 cut(s) 116, 323, 407, 871
MspR9I CCNGG 4 cut(s) 132, 600, 684, 1016
Mva1269I GAATGC 1 cut(s) 312
MvaI CCWGG 4 cut(s) 132, 600, 684, 1016
MvnI CGCG 1 cut(s) 1584
MwoI GCNNNNNNNGC 1 cut(s) 76
NcoI CCATGG 1 cut(s) 1195
NdeI CATATG 1 cut(s) 391
NdeII GATC 9 cut(s) 13, 218, 602, 626, 643, 716, 758, 1045, 1690
NlaIII CATG 9 cut(s) 314, 589, 770, 950, 1199, 1229, 1787, 1886, 1906
NlaIV GGNNCC 3 cut(s) 220, 468, 875
NmeAIII GCCGAG 1 cut(s) 1499
NmuCI GTSAC 5 cut(s) 538, 1096, 1427, 1462, 1841
NsiI ATGCAT 2 cut(s) 312, 768
NspI RCATGY 1 cut(s) 314
PagI TCATGA 1 cut(s) 1225
PciSI GCTCTTC 1 cut(s) 1027
PctI GAATGC 1 cut(s) 312
PdmI GAANNNNTTC 1 cut(s) 1523
PfeI GAWTC 4 cut(s) 18, 920, 1492, 1766
PinAI ACCGGT 2 cut(s) 322, 406
PkrI GCNGC 5 cut(s) 69, 121, 1219, 1250, 1356
PleI GAGTC 3 cut(s) 1067, 1654, 1900
PpsI GAGTC 3 cut(s) 1067, 1654, 1900
PpuMI RGGWCCY 2 cut(s) 466, 1590
Psp124BI GAGCTC 1 cut(s) 833
Psp1406I AACGTT 1 cut(s) 1416
Psp5II RGGWCCY 2 cut(s) 466, 1590
Psp6I CCWGG 4 cut(s) 130, 598, 682, 1014
PspGI CCWGG 4 cut(s) 130, 598, 682, 1014
PspN4I GGNNCC 3 cut(s) 220, 468, 875
PspPI GGNCC 9 cut(s) 134, 395, 466, 596, 845, 974, 1182, 1319, 1590
PspPPI RGGWCCY 2 cut(s) 466, 1590
PstI CTGCAG 1 cut(s) 124
PstNI CAGNNNCTG 1 cut(s) 1739
PsuI RGATCY 4 cut(s) 218, 643, 716, 1045
PvuII CAGCTG 1 cut(s) 1251
RsaI GTAC 6 cut(s) 268, 332, 1033, 1794, 1857, 1879
RsaNI GTAC 6 cut(s) 267, 331, 1032, 1793, 1856, 1878
SacI GAGCTC 1 cut(s) 833
SapI GCTCTTC 1 cut(s) 1027
SatI GCNGC 5 cut(s) 68, 120, 1218, 1249, 1355
Sau3AI GATC 9 cut(s) 13, 218, 602, 626, 643, 716, 758, 1045, 1690
Sau96I GGNCC 9 cut(s) 134, 395, 466, 596, 845, 974, 1182, 1319, 1590
ScaI AGTACT 1 cut(s) 1033
SchI GAGTC 3 cut(s) 1067, 1655, 1901
ScrFI CCNGG 4 cut(s) 132, 600, 684, 1016
SduI GDGCHC 4 cut(s) 671, 729, 833, 1022
SfaNI GCATC 6 cut(s) 686, 1204, 1330, 1528, 1627, 1777
SfcI CTRYAG 3 cut(s) 120, 1551, 1632
SinI GGWCC 6 cut(s) 395, 466, 845, 974, 1319, 1590
SmlI CTYRAG 1 cut(s) 1818
SmoI CTYRAG 1 cut(s) 1818
SsiI CCGC 4 cut(s) 553, 1299, 1582, 1875
SspI AATATT 1 cut(s) 1684
SspMI CTAG 4 cut(s) 647, 786, 1029, 1035
SstI GAGCTC 1 cut(s) 833
StyD4I CCNGG 4 cut(s) 130, 598, 682, 1014
StyI CCWWGG 3 cut(s) 977, 1195, 1698
TaaI ACNGT 9 cut(s) 335, 731, 886, 965, 1175, 1293, 1666, 1751, 1915
TaiI ACGT 2 cut(s) 1008, 1419
TaqI TCGA 4 cut(s) 16, 665, 970, 1071
TatI WGTACW 3 cut(s) 330, 1031, 1792
TfiI GAWTC 4 cut(s) 18, 920, 1492, 1766
TseFI GTSAC 5 cut(s) 538, 1096, 1427, 1462, 1841
TseI GCWGC 5 cut(s) 67, 119, 1217, 1248, 1354
Tsp45I GTSAC 5 cut(s) 538, 1096, 1427, 1462, 1841
TspDTI ATGAA 5 cut(s) 240, 1014, 1145, 1721, 1794
TspGWI ACGGA 3 cut(s) 1415, 1558, 1885
VpaK11BI GGWCC 6 cut(s) 395, 466, 845, 974, 1319, 1590
XapI RAATTY 4 cut(s) 619, 1521, 1568, 1727
XceI RCATGY 1 cut(s) 314
XmiI GTMKAC 1 cut(s) 1326
XmnI GAANNNNTTC 1 cut(s) 1523
XspI CTAG 4 cut(s) 647, 786, 1029, 1035
ZrmI AGTACT 1 cut(s) 1033
Zsp2I ATGCAT 2 cut(s) 312, 768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.