RchiOBHm_Chr4g0384791

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0005296
Physical Location & Seq
Forward (+)
138211 .. 144323
6113 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35834

Sequence Viewer

Length: 1914 bp
ATGGACGACCAAGATCGAATCGTCTCCACTGGAGAGAGACCTGTTAAGCCAGATGTCTTGAAAGAGCAGCCAGTTTTGCCCAAAGATGAGAGGATAGCTTCAGCAAATCCTTCTCCGGCTGCAGTCATTACAGGGCCTTCACGCACTGCCACAGAACAACCCAAGTTTTCAGATGTTGCAGGAGAACTTAGCACCACCCATCCACTCAATTTGTATGGATCCAATGAACAGAGTTATGGAAGTAGCACTGGTACTTGGGATGGATATCCTCAGTATATCAATACTGATGGAATGCATGTTGTATCACCGGTAATGTACAGTGATAATCCATCTCTTCTGTATCACTCTGGTTATGGTTTCAATCCCGAAATTGCATATGGACCATATTCACCGGTTGCTACACCTTTGGCTTCTTATTTGGTAGATGGCCAGCTGTATTCTCCACAACAGGTCCCCTTCTCTCCATCTTATTACCCTCAACCATCTCCTCCAAGTCTGTCTCATATTAATTCAGCTATTCCAGTGACACCAACTGAGCGGATGACCTCAGAAAGTAGTAGCACTGACAACATGGCCTTTGGGCCAGGATCAGGTTACTTTGTAAATTTTAGATCATTTAGTGGAGGAGATCTATCTGGAAATCTTGGTTCGAGCCCTTTAGCATCTCCAGGGATTTACCCTCAGCCAATGGGCATACTTGGATCTTATGAGCACAGTGTTGGGCAGATTTCTCATCCACAGAGATCAATGCATGGATTTGGAATGGTATCTAGTTCCTTTACAGGGCGCTACCCACATAATACTTCTCATCAGAGCTCCAACTTTGGTGGTCCTTCTTACTCGTTTGGTAATGACCGGAGCCGACTGACTGTTGACAAGGGTAGAAGAAGAGATAGGGAGTGGGATTCAATTTCCGTTTTCAGTAATTCACATGATATCTCCAATGACCGTAATCGAGGACCAAGGGCTTCAAAGCTGAAGGACAAGAACATGTCTGACCAGGGCTCTTCATCTAGTGCTAGGAAAATGGATCTATCTGCTTCTGGAATTAACCTCGACTCAATTAACCGGAAGGATTTTGTCACAGATTATGAGGAGGCAAAGTTCTTTATCATTAAGTCTTTCAGTGAGGATAATGTTCATAAAAGTATTAAATACAGTGTTTGGGCCAGCACTCCCCATGGAAACAAGAAGCTTGATGCTGCTTATCATGAGGCGAAGAGGATAAAAAGCAGCTGTCCAGTCTTTCTCTTATTTTCGGTTAATGCCAGTGGACAGTTTTGCGGAGTAGCCGAAATGATTGGACCAGTAGACTTTGGAAAAGATGCTGATTACTGGCAGCAAGACAGGTGGAATGGCCAATTTAAAGTTCAGTGGCACATTATTAAGGATGTTCCTAACATTCGCTTCCGTCACATTCTACTTGAAAATAATGATAATAAGCCCGTCACTCACAGCCGAGATTGTCAGGAGGTGAATCTGAAACAAGGAATTGAGCTGTTGAAAATTTTCAATGATTATGATGCACGGACATCTATAGTTGATGATTTTGAATTTTATGATGACCGCGAAAGGTCCTTGAAGGAAAGGAAAGCCAGACAACAAGCTTGTGCAACTACAGATGCTTCTGAGTCAGTTGTTCTTGATACAGTTAAGGAAGCTTCTAATATTTCCGATCAAGCCTTGGAGATGAAAGGAAGTAGTAGCAAAGAATTTGCAGGAACTGAACATGACAGTAGCTCCAAAACAGATTCAGTTGTATATGAACATGATGCTGTACAGCAAATATCTGATAGTTTATCTCAAGTATTGCAGTTGGAAGAGAGTGACAAAGAGGTAGTACCACCATCTGAAAGAGGCGGTACACATGACAGCGAGTCCGTTGACAAGGAGGTAACAGTTGTATCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

637

Amino Acids

70.34

Weight (kDa)

5.38

Isoelectric Point (pI)

51.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 367 - 505 4.5e-50 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 538
AccI GTMKAC 1 cut(s) 1311
AccII CGCG 1 cut(s) 1569
AciI CCGC 4 cut(s) 538, 1284, 1567, 1860
AclWI GGATC 5 cut(s) 213, 226, 595, 709, 1038
AcoI YGGCCR 2 cut(s) 427, 1357
AcsI RAATTY 4 cut(s) 604, 1506, 1553, 1712
AcuI CTGAAG 2 cut(s) 84, 998
AfaI GTAC 5 cut(s) 253, 317, 1779, 1842, 1864
AfiI CCNNNNNNNGG 2 cut(s) 590, 783
AflIII ACRYGT 1 cut(s) 990
AgeI ACCGGT 2 cut(s) 307, 391
AgsI TTSAA 9 cut(s) 61, 361, 909, 972, 1427, 1504, 1513, 1553, 1582
AhdI GACNNNNNGTC 1 cut(s) 1876
AjnI CCWGG 3 cut(s) 583, 667, 999
AjuI GAANNNNNNNTTGG 2 cut(s) 1353, 1385
AloI GAACNNNNNNTCC 2 cut(s) 1088, 1120
Alw21I GWGCWC 2 cut(s) 714, 818
Alw26I GTCTC 3 cut(s) 28, 31, 504
AlwI GGATC 5 cut(s) 213, 226, 595, 709, 1038
AlwNI CAGNNNCTG 1 cut(s) 1724
AoxI GGCC 6 cut(s) 134, 427, 573, 581, 1167, 1357
ApeKI GCWGC 5 cut(s) 67, 119, 1202, 1233, 1339
ApoI RAATTY 4 cut(s) 604, 1506, 1553, 1712
AseI ATTAAT 1 cut(s) 507
AsiGI ACCGGT 2 cut(s) 307, 391
Asp700I GAANNNNTTC 1 cut(s) 1508
AspLEI GCGC 1 cut(s) 789
AspS9I GGNCC 9 cut(s) 134, 380, 451, 581, 830, 959, 1167, 1304, 1575
AsuHPI GGTGA 3 cut(s) 297, 381, 1486
AvaII GGWCC 6 cut(s) 380, 451, 830, 959, 1304, 1575
BaeI ACNNNNGTAYC 1 cut(s) 1887
BalI TGGCCA 2 cut(s) 429, 1359
BamHI GGATCC 1 cut(s) 218
BanII GRGCYC 3 cut(s) 656, 818, 1007
Bbv12I GWGCWC 2 cut(s) 714, 818
BbvCI CCTCAGC 1 cut(s) 681
BbvI GCAGC 5 cut(s) 79, 106, 1189, 1245, 1351
BccI CCATC 8 cut(s) 207, 254, 281, 337, 419, 472, 490, 1855
BciT130I CCWGG 3 cut(s) 585, 669, 1001
BcoDI GTCTC 3 cut(s) 28, 31, 504
BfaI CTAG 3 cut(s) 771, 1014, 1020
BfmI CTRYAG 3 cut(s) 120, 1536, 1617
BfoI RGCGCY 1 cut(s) 790
BglII AGATCT 1 cut(s) 628
BisI GCNGC 5 cut(s) 68, 120, 1203, 1234, 1340
BlsI GCNGC 5 cut(s) 69, 121, 1204, 1235, 1341
Bme1390I CCNGG 3 cut(s) 585, 669, 1001
Bme18I GGWCC 6 cut(s) 380, 451, 830, 959, 1304, 1575
BmeRI GACNNNNNGTC 1 cut(s) 1876
BmgT120I GGNCC 9 cut(s) 134, 380, 451, 581, 830, 959, 1167, 1304, 1575
BmiI GGNNCC 3 cut(s) 220, 453, 860
BmrFI CCNGG 3 cut(s) 585, 669, 1001
BmsI GCATC 6 cut(s) 671, 1189, 1315, 1513, 1612, 1762
BpmI CTGGAG 2 cut(s) 51, 651
Bpu10I CCTNAGC 1 cut(s) 681
BpuEI CTTGAG 1 cut(s) 1788
BsaBI GATNNNNATC 1 cut(s) 264
BsaI GGTCTC 1 cut(s) 31
BsaJI CCNNGG 5 cut(s) 668, 962, 1000, 1180, 1683
BsaWI WCCGGW 4 cut(s) 307, 391, 855, 1068
BsaXI ACNNNNNCTCC 4 cut(s) 1088, 1118, 1724, 1754
Bsc4I CCNNNNNNNGG 2 cut(s) 590, 783
Bse118I RCCGGY 2 cut(s) 307, 391
Bse1I ACTGG 8 cut(s) 34, 71, 253, 521, 1241, 1269, 1307, 1340
Bse8I GATNNNNATC 1 cut(s) 264
BseBI CCWGG 3 cut(s) 585, 669, 1001
BseDI CCNNGG 5 cut(s) 668, 962, 1000, 1180, 1683
BseGI GGATG 5 cut(s) 199, 265, 546, 733, 1396
BseJI GATNNNNATC 1 cut(s) 264
BseLI CCNNNNNNNGG 2 cut(s) 590, 783
BseMII CTCAG 5 cut(s) 284, 525, 561, 695, 1620
BseNI ACTGG 8 cut(s) 34, 71, 253, 521, 1241, 1269, 1307, 1340
BseRI GAGGAG 3 cut(s) 477, 639, 1109
BseXI GCAGC 5 cut(s) 79, 106, 1189, 1245, 1351
Bsh1236I CGCG 1 cut(s) 1569
BshFI GGCC 6 cut(s) 136, 429, 575, 583, 1169, 1359
BshTI ACCGGT 2 cut(s) 307, 391
BsiHKAI GWGCWC 2 cut(s) 714, 818
BsiSI CCGG 5 cut(s) 116, 308, 392, 856, 1069
BslFI GGGAC 1 cut(s) 437
BslI CCNNNNNNNGG 2 cut(s) 590, 783
BsmAI GTCTC 3 cut(s) 28, 31, 504
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 1 cut(s) 437
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 6 cut(s) 136, 429, 575, 583, 1169, 1359
Bso31I GGTCTC 1 cut(s) 31
Bsp1286I GDGCHC 4 cut(s) 656, 714, 818, 1007
Bsp1407I TGTACA 2 cut(s) 315, 1777
Bsp143I GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1030, 1675
Bsp19I CCATGG 1 cut(s) 1180
BspACI CCGC 4 cut(s) 538, 1284, 1567, 1860
BspANI GGCC 6 cut(s) 136, 429, 575, 583, 1169, 1359
BspCNI CTCAG 5 cut(s) 283, 526, 560, 694, 1621
BspFNI CGCG 1 cut(s) 1569
BspHI TCATGA 1 cut(s) 1210
BspLI GGNNCC 3 cut(s) 220, 453, 860
BspMAI CTGCAG 1 cut(s) 124
BspPI GGATC 5 cut(s) 213, 226, 595, 709, 1038
BspQI GCTCTTC 1 cut(s) 1012
BspTNI GGTCTC 1 cut(s) 31
BsrBI CCGCTC 1 cut(s) 538
BsrFI RCCGGY 2 cut(s) 307, 391
BsrGI TGTACA 2 cut(s) 315, 1777
BsrI ACTGG 8 cut(s) 34, 71, 253, 521, 1241, 1269, 1307, 1340
BssAI RCCGGY 2 cut(s) 307, 391
BssECI CCNNGG 5 cut(s) 668, 962, 1000, 1180, 1683
BssMI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1030, 1675
BssT1I CCWWGG 3 cut(s) 962, 1180, 1683
Bst2UI CCWGG 3 cut(s) 585, 669, 1001
Bst4CI ACNGT 9 cut(s) 320, 716, 871, 950, 1160, 1278, 1651, 1736, 1900
Bst6I CTCTTC 5 cut(s) 339, 883, 1012, 1214, 1815
BstAUI TGTACA 2 cut(s) 315, 1777
BstC8I GCNNGC 2 cut(s) 431, 1171
BstDEI CTNAG 6 cut(s) 188, 270, 534, 547, 681, 1629
BstDSI CCRYGG 1 cut(s) 1180
BstF5I GGATG 5 cut(s) 199, 265, 546, 733, 1396
BstFNI CGCG 1 cut(s) 1569
BstH2I RGCGCY 1 cut(s) 790
BstHHI GCGC 1 cut(s) 789
BstKTI GATC 9 cut(s) 16, 221, 590, 614, 631, 704, 746, 1033, 1678
BstMAI GTCTC 3 cut(s) 28, 31, 504
BstMBI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1030, 1675
BstMWI GCNNNNNNNGC 1 cut(s) 76
BstNI CCWGG 3 cut(s) 585, 669, 1001
BstNSI RCATGY 2 cut(s) 299, 994
BstSCI CCNGG 3 cut(s) 583, 667, 999
BstSFI CTRYAG 3 cut(s) 120, 1536, 1617
BstUI CGCG 1 cut(s) 1569
BstV1I GCAGC 5 cut(s) 79, 106, 1189, 1245, 1351
BstX2I RGATCY 4 cut(s) 218, 628, 701, 1030
BstYI RGATCY 4 cut(s) 218, 628, 701, 1030
BsuRI GGCC 6 cut(s) 136, 429, 575, 583, 1169, 1359
BtgI CCRYGG 1 cut(s) 1180
BtsCI GGATG 5 cut(s) 199, 265, 546, 733, 1396
BtsI GCAGTG 1 cut(s) 144
Cac8I GCNNGC 2 cut(s) 431, 1171
CaiI CAGNNNCTG 1 cut(s) 1724
CciI TCATGA 1 cut(s) 1210
CfoI GCGC 1 cut(s) 789
Cfr10I RCCGGY 2 cut(s) 307, 391
Cfr13I GGNCC 9 cut(s) 134, 380, 451, 581, 830, 959, 1167, 1304, 1575
Csp6I GTAC 5 cut(s) 252, 316, 1778, 1841, 1863
CspAI ACCGGT 2 cut(s) 307, 391
CspCI CAANNNNNGTGG 6 cut(s) 192, 227, 808, 843, 1331, 1366
CviQI GTAC 5 cut(s) 252, 316, 1778, 1841, 1863
DdeI CTNAG 6 cut(s) 188, 270, 534, 547, 681, 1629
DpnI GATC 9 cut(s) 15, 220, 589, 613, 630, 703, 745, 1032, 1677
DpnII GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1030, 1675
DraI TTTAAA 1 cut(s) 1366
DriI GACNNNNNGTC 1 cut(s) 1876
EaeI YGGCCR 2 cut(s) 427, 1357
Eam1104I CTCTTC 5 cut(s) 339, 883, 1012, 1214, 1815
Eam1105I GACNNNNNGTC 1 cut(s) 1876
EarI CTCTTC 5 cut(s) 339, 883, 1012, 1214, 1815
Ecl136II GAGCTC 1 cut(s) 816
Eco130I CCWWGG 3 cut(s) 962, 1180, 1683
Eco24I GRGCYC 3 cut(s) 656, 818, 1007
Eco31I GGTCTC 1 cut(s) 31
Eco32I GATATC 2 cut(s) 266, 937
Eco47I GGWCC 6 cut(s) 380, 451, 830, 959, 1304, 1575
Eco53kI GAGCTC 1 cut(s) 816
Eco57I CTGAAG 2 cut(s) 84, 998
EcoICRI GAGCTC 1 cut(s) 816
EcoO109I RGGNCCY 3 cut(s) 134, 451, 1575
EcoRII CCWGG 3 cut(s) 583, 667, 999
EcoRV GATATC 2 cut(s) 266, 937
EcoT14I CCWWGG 3 cut(s) 962, 1180, 1683
EcoT22I ATGCAT 2 cut(s) 297, 753
EcoT38I GRGCYC 3 cut(s) 656, 818, 1007
ErhI CCWWGG 3 cut(s) 962, 1180, 1683
Esp3I CGTCTC 1 cut(s) 28
FaqI GGGAC 1 cut(s) 437
FauNDI CATATG 1 cut(s) 376
FblI GTMKAC 1 cut(s) 1311
Fnu4HI GCNGC 5 cut(s) 68, 120, 1203, 1234, 1340
FokI GGATG 5 cut(s) 186, 272, 553, 720, 1403
FriOI GRGCYC 3 cut(s) 656, 818, 1007
Fsp4HI GCNGC 5 cut(s) 68, 120, 1203, 1234, 1340
FspBI CTAG 3 cut(s) 771, 1014, 1020
GlaI GCGC 1 cut(s) 788
GluI GCNGC 5 cut(s) 68, 120, 1203, 1234, 1340
GsuI CTGGAG 2 cut(s) 51, 651
HaeII RGCGCY 1 cut(s) 790
HaeIII GGCC 6 cut(s) 136, 429, 575, 583, 1169, 1359
HapII CCGG 5 cut(s) 116, 308, 392, 856, 1069
HhaI GCGC 1 cut(s) 789
Hin6I GCGC 1 cut(s) 787
HinP1I GCGC 1 cut(s) 787
HincII GTYRAC 2 cut(s) 874, 1885
HindII GTYRAC 2 cut(s) 874, 1885
HindIII AAGCTT 3 cut(s) 1193, 1605, 1659
HinfI GANTC 7 cut(s) 18, 905, 1058, 1477, 1631, 1751, 1877
HpaII CCGG 5 cut(s) 116, 308, 392, 856, 1069
HphI GGTGA 3 cut(s) 297, 381, 1486
Hpy166II GTNNAC 5 cut(s) 874, 1274, 1312, 1865, 1885
Hpy188I TCNGA 9 cut(s) 172, 550, 813, 997, 1482, 1630, 1675, 1792, 1852
Hpy188III TCNNGA 7 cut(s) 58, 365, 636, 1044, 1211, 1469, 1643
Hpy8I GTNNAC 5 cut(s) 874, 1274, 1312, 1865, 1885
HpyAV CCTTC 7 cut(s) 120, 147, 466, 843, 973, 1066, 1576
HpyCH4III ACNGT 9 cut(s) 320, 716, 871, 950, 1160, 1278, 1651, 1736, 1900
HpyCH4V TGCA 9 cut(s) 122, 179, 295, 374, 751, 1526, 1613, 1718, 1813
HpyF10VI GCNNNNNNNGC 1 cut(s) 76
HpyF3I CTNAG 6 cut(s) 188, 270, 534, 547, 681, 1629
HspAI GCGC 1 cut(s) 787
Kzo9I GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1030, 1675
LguI GCTCTTC 1 cut(s) 1012
LmnI GCTCC 3 cut(s) 821, 858, 1745
Lsp1109I GCAGC 5 cut(s) 79, 106, 1189, 1245, 1351
LweI GCATC 6 cut(s) 671, 1189, 1315, 1513, 1612, 1762
MaeI CTAG 3 cut(s) 771, 1014, 1020
MaeIII GTNAC 7 cut(s) 523, 593, 1081, 1412, 1447, 1826, 1894
MalI GATC 9 cut(s) 15, 220, 589, 613, 630, 703, 745, 1032, 1677
MbiI CCGCTC 1 cut(s) 538
MboI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1030, 1675
MboII GAAGA 6 cut(s) 326, 897, 900, 999, 1231, 1832
MflI RGATCY 4 cut(s) 218, 628, 701, 1030
MhlI GDGCHC 4 cut(s) 656, 714, 818, 1007
MlsI TGGCCA 2 cut(s) 429, 1359
MluNI TGGCCA 2 cut(s) 429, 1359
MlyI GAGTC 3 cut(s) 1052, 1640, 1886
MmeI TCCRAC 2 cut(s) 843, 1797
Mox20I TGGCCA 2 cut(s) 429, 1359
Mph1103I ATGCAT 2 cut(s) 297, 753
MroXI GAANNNNTTC 1 cut(s) 1508
MscI TGGCCA 2 cut(s) 429, 1359
Msp20I TGGCCA 2 cut(s) 429, 1359
MspA1I CMGCKG 2 cut(s) 433, 1236
MspI CCGG 5 cut(s) 116, 308, 392, 856, 1069
MspR9I CCNGG 3 cut(s) 585, 669, 1001
Mva1269I GAATGC 1 cut(s) 297
MvaI CCWGG 3 cut(s) 585, 669, 1001
MvnI CGCG 1 cut(s) 1569
MwoI GCNNNNNNNGC 1 cut(s) 76
NcoI CCATGG 1 cut(s) 1180
NdeI CATATG 1 cut(s) 376
NdeII GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1030, 1675
NlaIV GGNNCC 3 cut(s) 220, 453, 860
NmeAIII GCCGAG 1 cut(s) 1484
NmuCI GTSAC 5 cut(s) 523, 1081, 1412, 1447, 1826
NsiI ATGCAT 2 cut(s) 297, 753
NspI RCATGY 2 cut(s) 299, 994
PagI TCATGA 1 cut(s) 1210
PciI ACATGT 1 cut(s) 990
PciSI GCTCTTC 1 cut(s) 1012
PctI GAATGC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 1508
PfeI GAWTC 4 cut(s) 18, 905, 1477, 1751
PinAI ACCGGT 2 cut(s) 307, 391
PkrI GCNGC 5 cut(s) 69, 121, 1204, 1235, 1341
PleI GAGTC 3 cut(s) 1052, 1639, 1885
PpsI GAGTC 3 cut(s) 1052, 1639, 1885
PpuMI RGGWCCY 2 cut(s) 451, 1575
PscI ACATGT 1 cut(s) 990
PshBI ATTAAT 1 cut(s) 507
Psp124BI GAGCTC 1 cut(s) 818
Psp5II RGGWCCY 2 cut(s) 451, 1575
Psp6I CCWGG 3 cut(s) 583, 667, 999
PspGI CCWGG 3 cut(s) 583, 667, 999
PspN4I GGNNCC 3 cut(s) 220, 453, 860
PspPI GGNCC 9 cut(s) 134, 380, 451, 581, 830, 959, 1167, 1304, 1575
PspPPI RGGWCCY 2 cut(s) 451, 1575
PstI CTGCAG 1 cut(s) 124
PstNI CAGNNNCTG 1 cut(s) 1724
PsuI RGATCY 4 cut(s) 218, 628, 701, 1030
PvuII CAGCTG 2 cut(s) 433, 1236
RsaI GTAC 5 cut(s) 253, 317, 1779, 1842, 1864
RsaNI GTAC 5 cut(s) 252, 316, 1778, 1841, 1863
SacI GAGCTC 1 cut(s) 818
SapI GCTCTTC 1 cut(s) 1012
SatI GCNGC 5 cut(s) 68, 120, 1203, 1234, 1340
Sau3AI GATC 9 cut(s) 13, 218, 587, 611, 628, 701, 743, 1030, 1675
Sau96I GGNCC 9 cut(s) 134, 380, 451, 581, 830, 959, 1167, 1304, 1575
SchI GAGTC 3 cut(s) 1052, 1640, 1886
ScrFI CCNGG 3 cut(s) 585, 669, 1001
SduI GDGCHC 4 cut(s) 656, 714, 818, 1007
SfaNI GCATC 6 cut(s) 671, 1189, 1315, 1513, 1612, 1762
SfcI CTRYAG 3 cut(s) 120, 1536, 1617
SinI GGWCC 6 cut(s) 380, 451, 830, 959, 1304, 1575
SmlI CTYRAG 1 cut(s) 1803
SmoI CTYRAG 1 cut(s) 1803
SsiI CCGC 4 cut(s) 538, 1284, 1567, 1860
SspI AATATT 1 cut(s) 1669
SspMI CTAG 3 cut(s) 771, 1014, 1020
SstI GAGCTC 1 cut(s) 818
StyD4I CCNGG 3 cut(s) 583, 667, 999
StyI CCWWGG 3 cut(s) 962, 1180, 1683
TaaI ACNGT 9 cut(s) 320, 716, 871, 950, 1160, 1278, 1651, 1736, 1900
TaqI TCGA 4 cut(s) 16, 650, 955, 1056
TatI WGTACW 2 cut(s) 315, 1777
TfiI GAWTC 4 cut(s) 18, 905, 1477, 1751
TseFI GTSAC 5 cut(s) 523, 1081, 1412, 1447, 1826
TseI GCWGC 5 cut(s) 67, 119, 1202, 1233, 1339
Tsp45I GTSAC 5 cut(s) 523, 1081, 1412, 1447, 1826
TspDTI ATGAA 5 cut(s) 240, 999, 1130, 1706, 1779
TspGWI ACGGA 4 cut(s) 904, 1400, 1543, 1870
VpaK11BI GGWCC 6 cut(s) 380, 451, 830, 959, 1304, 1575
VspI ATTAAT 1 cut(s) 507
XapI RAATTY 4 cut(s) 604, 1506, 1553, 1712
XceI RCATGY 2 cut(s) 299, 994
XmiI GTMKAC 1 cut(s) 1311
XmnI GAANNNNTTC 1 cut(s) 1508
XspI CTAG 3 cut(s) 771, 1014, 1020
Zsp2I ATGCAT 2 cut(s) 297, 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.