Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006451

Physical Location & Seq

Genomic Coordinates Forward (+)

18515466 .. 18520269

Gene Structure 4804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g14910.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGCAAGGCCTCGTCGGCTTGGTCCGCGAGTCCCTTGACTTCCGCACCAGCGGGCTCGTCGATAAGATCGGCTCTAGCATCAGGAAATCTCGAATCGGACTCTTCGCTAAGCCTCCGCCGGCGCGTGCGCTTCCTCCGCCATTCTCGGTGGACGACGCGCCGCCGATTCGGTGGCGCAAAGGCGAGTTGATTGGGTCCGGGGCCTTCGGGCGCGTCTATATGGGGATGAACCTCGATTCCGGAGAGCTTATTGCCGTTAAACAGGTTTCGATTGCTGCGAGTAGTGCTTCGAAGGAGAAGACACAGGCTCATATTCGGGAGCTGGAGGAGGAAGTGAGGCTTCTTAAGAATCTTTCACACCCAAACATTGTTAGGTACTTGGGGACTGCTAGAGAAGCCGATTCGTTGAATATTCTGTTGGAATTTGTGCCAGGCGGATCCATATCATCCCTCTTGGGGAAGTTTGGGTCATTTCCCGAGTCTGTTATAAGAATGTACACAAAGCAACTCTTGTTGGGCCTTGAATACTTACACAAGAATGGAATTATGCATAGGGACATCAAGGGTGCAAATATCCTTGTCGATAATAAGGGATGCATTAAACTTGCAGACTTTGGTGCATCGAAGAAAGTTGTTGAACTGGCCACTATAAATGGTGCCAAGTCAATGAAGGGTACTCCATATTGGATGGCCCCGGAAGTTATTCTCCAGACTGGCCATAGCTTCTCTGCTGACATATGGAGTGTTGGATGTACTGTGATTGAGATGGCTACTGGAAAGCCTCCATGGAGCCAACAGTATCAGGAGGTTGCTGCTCTCTTCCATATTGGAACAACAAAATCTCACCCACCCATTCCTGAGCATCTCTCTGCTGAGGCAAAGGATTTTTTATTACAATGTCTAGAGAAGGAACCTGACTTCAGGTCTTCTGCATCAGAATTGCTGCAGCACCCATTTGTCACTGGGTATTATCAGGAACCTCGTTCAGCATTACGCACTTCAGTTATGGAAGCTGGAAACCAGATGGCAACACCTAGGACCAATCTTAAGAACTCTATGAATGTTTCGATCAGAAGGTCAACCTCCGCAGGTCTGAAGGATATTTGTGACATGGGCACTGTAAGGTGCTCAACTGTATACCCTAACAATATCTCAGGAGGGAGCTCCTGCTGGGGAGCAAATAATACTGATGATGACATGTGTCAGCTGGATGATTCTGATGATATAATGCTTGGTTCATTTGTAAAATTCAATTCTGTGATGGCATCCGGAGGATTGAACAAGAGTTTCAATCCAATGTGTGAACCAACTGATGACTGGCAATGTAAGTTTGATGAAAGTGTGGAATTGGGGAAAAGTGGAATGAACTTGCCCCCTTGTCAAACAATACATGAGGCGTCTAACAGCGCTGGAGCGTCTCATAAGGTGGAGAATGAATTCACATTTCCTTGTGGTCCATCAGTAGCCGAGGATGATGAGGAAGTCACGGAAACGAAAATAAGAGCCTTCCTGGATGAAAAGGCATTAGATCTGAAGAAGCTGCAGACACCATTATTTGAAGAATTCTTTAATACTGTAAATGCAGCTGGTCCTCCCGGTGGAATTGGAAATGCAAATTGTGATCATGTTTCAAATAATCTGCATCTACCTCCTAAAAGCAAGTCACCCAGTAGGGCCCCTAGTAGAAGATTCTCTTCAATTGTTGGATCTGTCAATGGTTCACGCTTCGGGAAACACACCCTAAATGCATCAAATGCAAGCGTTGAGCATAATCATATCTTACAGGAAATTCAGCCACCTCAGCTTAGTGAACGGAAAGGGCCTATTGCGGATCCTCAGAAAGAATCATTTAGTGCAAGTGCAAGTTTTTCTGAGTTGCAAAGGAGGTGGAAAGAGGAGCTTGATGAAGAATTAGAGAGGAAACGAGAGATGAAACGCAAGGCTGGTTTAGGAATGAATACATCACCATCGCCGAACAACCGGATTATTAGTCGACAAAGAGAGCAGCAATGGGGTGTTTTCCCCAGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

678

Amino Acids

74.37

Weight (kDa)

7.24

Isoelectric Point (pI)

47.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	59 - 320	2.2e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	61 - 316	1.9e-46	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	173 - 248	8.4e-06	Fungal protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06030
fragaria_vesca	FvH4_4g14910 FvH4_4g14910
malus_domestica	MD13G1186500.v1.1 MD16G1187200.v1.1
prunus_persica	Prupe.1G154200_v2.0.a1 Prupe.1G154200_v2.0.a1
pyrus_communis	pycom13g16140 pycom16g15720
rosa_chinensis	RchiOBHm_Chr4g0417171
rosa_laevigata	RLG00000007924
rosa_multiflora	Rmu_co8320689.1_g000001 Rmu_sc0000959.1_g000002 Rmu_sc0001643.1_g000003
rosa_roxburghii	Rroxscaffold_3G00245000 Rroxscaffold_5G00361000
rosa_rugosa	Rorug02G0282700 Rorug04G0146200
rosa_samantha	Rh2AG335100 Rh4AG209200 Rh4BG206100 Rh4BG206300 Rh4CG220200 Rh4DG206900 Rh5AG248600
rosa_wichuraiana	Rw4G017720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	488
Acc36I	ACCTGC	1 cut(s)	1079
AccB1I	GGYRCC	1 cut(s)	656
AccI	GTMKAC	2 cut(s)	1137, 1993
AccII	CGCG	4 cut(s)	27, 124, 158, 213
AccIII	TCCGGA	2 cut(s)	239, 1268
AciI	CCGC	9 cut(s)	25, 43, 51, 116, 137, 161, 435, 1086, 1829
AclWI	GGATC	5 cut(s)	432, 445, 1714, 1826, 1839
AcoI	YGGCCR	2 cut(s)	642, 715
AcsI	RAATTY	5 cut(s)	422, 1247, 1436, 1562, 1788
AcuI	CTGAAG	4 cut(s)	904, 984, 1115, 1553
AcyI	GRCGYC	1 cut(s)	1397
AfaI	GTAC	4 cut(s)	377, 497, 676, 754
AfeI	AGCGCT	1 cut(s)	1408
AfiI	CCNNNNNNNGG	2 cut(s)	456, 1598
AflII	CTTAAG	2 cut(s)	344, 1046
AflIII	ACRYGT	1 cut(s)	1197
AgsI	TTSAA	9 cut(s)	409, 524, 638, 1252, 1279, 1291, 1559, 1632, 1698
AhdI	GACNNNNNGTC	1 cut(s)	922
AjnI	CCWGG	2 cut(s)	430, 1509
AjuI	GAANNNNNNNTTGG	2 cut(s)	401, 433
AloI	GAACNNNNNNTCC	2 cut(s)	221, 253
Alw21I	GWGCWC	2 cut(s)	1130, 1166
Alw26I	GTCTC	1 cut(s)	1422
AlwI	GGATC	5 cut(s)	432, 445, 1714, 1826, 1839
Ama87I	CYCGRG	1 cut(s)	476
Aor13HI	TCCGGA	2 cut(s)	239, 1268
Aor51HI	AGCGCT	1 cut(s)	1408
AoxI	GGCC	8 cut(s)	7, 201, 517, 642, 690, 715, 1674, 1820
ApaI	GGGCCC	1 cut(s)	1678
ApeKI	GCWGC	7 cut(s)	275, 812, 943, 946, 1540, 1583, 2005
ApoI	RAATTY	5 cut(s)	422, 1247, 1436, 1562, 1788
Asp700I	GAANNNNTTC	2 cut(s)	702, 1436
AspA2I	CCTAGG	1 cut(s)	1034
AspLEI	GCGC	6 cut(s)	124, 130, 160, 177, 213, 1409
AsuC2I	CCSGG	3 cut(s)	199, 695, 1596
AsuHPI	GGTGA	3 cut(s)	836, 1656, 1956
AsuII	TTCGAA	1 cut(s)	290
AvaI	CYCGRG	1 cut(s)	476
AvaII	GGWCC	5 cut(s)	22, 195, 1038, 1454, 1589
AvrII	CCTAGG	1 cut(s)	1034
BaeGI	GKGCMC	2 cut(s)	1118, 1678
BalI	TGGCCA	2 cut(s)	644, 717
BamHI	GGATCC	2 cut(s)	437, 1831
BanI	GGYRCC	1 cut(s)	656
BanII	GRGCYC	3 cut(s)	57, 1166, 1678
BbsI	GAAGAC	2 cut(s)	305, 918
Bbv12I	GWGCWC	2 cut(s)	1130, 1166
BbvCI	CCTCAGC	2 cut(s)	873, 1800
BbvI	GCAGC	7 cut(s)	262, 799, 930, 958, 1527, 1595, 2017
BccI	CCATC	6 cut(s)	682, 760, 1018, 1255, 1465, 1975
BceAI	ACGGC	1 cut(s)	239
BciT130I	CCWGG	2 cut(s)	432, 1511
BclI	TGATCA	1 cut(s)	1621
BcnI	CCSGG	3 cut(s)	199, 695, 1596
BcoDI	GTCTC	1 cut(s)	1422
BfaI	CTAG	5 cut(s)	75, 390, 902, 1035, 1680
BfmI	CTRYAG	2 cut(s)	944, 1541
BfoI	RGCGCY	1 cut(s)	1410
BfrI	CTTAAG	2 cut(s)	344, 1046
BfuAI	ACCTGC	1 cut(s)	1079
BglI	GCCNNNNNGGC	1 cut(s)	15
BglII	AGATCT	1 cut(s)	1528
BisI	GCNGC	8 cut(s)	161, 276, 813, 944, 947, 1541, 1584, 2006
BlnI	CCTAGG	1 cut(s)	1034
BlpI	GCTNAGC	1 cut(s)	108
BlsI	GCNGC	8 cut(s)	162, 277, 814, 945, 948, 1542, 1585, 2007
Bme1390I	CCNGG	5 cut(s)	199, 432, 695, 1511, 1596
Bme18I	GGWCC	5 cut(s)	22, 195, 1038, 1454, 1589
BmeRI	GACNNNNNGTC	1 cut(s)	922
BmeT110I	CYCGRG	1 cut(s)	476
BmrFI	CCNGG	5 cut(s)	199, 432, 695, 1511, 1596
BmrI	ACTGGG	2 cut(s)	972, 1662
BmsI	GCATC	8 cut(s)	87, 584, 629, 871, 941, 1274, 1651, 1757
BmuI	ACTGGG	2 cut(s)	972, 1662
BoxI	GACNNNNGTC	1 cut(s)	1200
BpiI	GAAGAC	2 cut(s)	305, 918
BplI	GAGNNNNNCTC	2 cut(s)	851, 883
BpmI	CTGGAG	3 cut(s)	344, 692, 1431
Bpu10I	CCTNAGC	3 cut(s)	858, 873, 1800
Bpu1102I	GCTNAGC	1 cut(s)	108
Bpu14I	TTCGAA	1 cut(s)	290
BpuMI	CCSGG	3 cut(s)	199, 695, 1596
BsaBI	GATNNNNATC	1 cut(s)	442
BsaHI	GRCGYC	1 cut(s)	1397
BsaJI	CCNNGG	5 cut(s)	198, 693, 785, 1034, 1467
BsaWI	WCCGGW	3 cut(s)	239, 1268, 1980
Bsc4I	CCNNNNNNNGG	2 cut(s)	456, 1598
Bse118I	RCCGGY	1 cut(s)	118
Bse1I	ACTGG	6 cut(s)	645, 718, 778, 967, 1322, 1668
Bse3DI	GCAATG	2 cut(s)	1328, 2015
Bse8I	GATNNNNATC	1 cut(s)	442
BseAI	TCCGGA	2 cut(s)	239, 1268
BseBI	CCWGG	2 cut(s)	432, 1511
BseDI	CCNNGG	5 cut(s)	198, 693, 785, 1034, 1467
BseGI	GGATG	9 cut(s)	231, 446, 599, 693, 755, 1216, 1265, 1477, 1519
BseJI	GATNNNNATC	1 cut(s)	442
BseLI	CCNNNNNNNGG	2 cut(s)	456, 1598
BseMI	GCAATG	2 cut(s)	1328, 2015
BseMII	CTCAG	6 cut(s)	849, 864, 1167, 1814, 1850, 1863
BseNI	ACTGG	6 cut(s)	645, 718, 778, 967, 1322, 1668
BseRI	GAGGAG	2 cut(s)	341, 1910
BseSI	GKGCMC	2 cut(s)	1118, 1678
BseXI	GCAGC	7 cut(s)	262, 799, 930, 958, 1527, 1595, 2017
BseYI	CCCAGC	1 cut(s)	1170
Bsh1236I	CGCG	4 cut(s)	27, 124, 158, 213
BshFI	GGCC	8 cut(s)	9, 203, 519, 644, 692, 717, 1676, 1822
BshNI	GGYRCC	1 cut(s)	656
BsiHKAI	GWGCWC	2 cut(s)	1130, 1166
BsiHKCI	CYCGRG	1 cut(s)	476
BsiSI	CCGG	7 cut(s)	119, 198, 240, 695, 1269, 1596, 1981
BslFI	GGGAC	3 cut(s)	16, 397, 569
BslI	CCNNNNNNNGG	2 cut(s)	456, 1598
BsmAI	GTCTC	1 cut(s)	1422
BsmBI	CGTCTC	1 cut(s)	1422
BsmFI	GGGAC	3 cut(s)	16, 397, 569
BsnI	GGCC	8 cut(s)	9, 203, 519, 644, 692, 717, 1676, 1822
BsoBI	CYCGRG	1 cut(s)	476
Bsp119I	TTCGAA	1 cut(s)	290
Bsp120I	GGGCCC	1 cut(s)	1674
Bsp1286I	GDGCHC	5 cut(s)	57, 1118, 1130, 1166, 1678
Bsp13I	TCCGGA	2 cut(s)	239, 1268
Bsp1407I	TGTACA	1 cut(s)	495
Bsp143I	GATC	7 cut(s)	66, 437, 1068, 1528, 1621, 1706, 1831
Bsp1720I	GCTNAGC	1 cut(s)	108
Bsp19I	CCATGG	1 cut(s)	785
BspACI	CCGC	9 cut(s)	25, 43, 51, 116, 137, 161, 435, 1086, 1829
BspANI	GGCC	8 cut(s)	9, 203, 519, 644, 692, 717, 1676, 1822
BspCNI	CTCAG	6 cut(s)	850, 865, 1166, 1813, 1849, 1864
BspEI	TCCGGA	2 cut(s)	239, 1268
BspFNI	CGCG	4 cut(s)	27, 124, 158, 213
BspMAI	CTGCAG	2 cut(s)	948, 1545
BspMI	ACCTGC	1 cut(s)	1079
BspPI	GGATC	5 cut(s)	432, 445, 1714, 1826, 1839
BspT104I	TTCGAA	1 cut(s)	290
BspT107I	GGYRCC	1 cut(s)	656
BspTI	CTTAAG	2 cut(s)	344, 1046
BsrDI	GCAATG	2 cut(s)	1328, 2015
BsrFI	RCCGGY	1 cut(s)	118
BsrGI	TGTACA	1 cut(s)	495
BsrI	ACTGG	6 cut(s)	645, 718, 778, 967, 1322, 1668
BssAI	RCCGGY	1 cut(s)	118
BssECI	CCNNGG	5 cut(s)	198, 693, 785, 1034, 1467
BssMI	GATC	7 cut(s)	66, 437, 1068, 1528, 1621, 1706, 1831
BssNAI	GTATAC	1 cut(s)	1138
BssNI	GRCGYC	1 cut(s)	1397
BssT1I	CCWWGG	2 cut(s)	785, 1034
Bst1107I	GTATAC	1 cut(s)	1138
Bst2UI	CCWGG	2 cut(s)	432, 1511
Bst4CI	ACNGT	5 cut(s)	757, 798, 1120, 1135, 1576
Bst6I	CTCTTC	3 cut(s)	107, 824, 1699
BstACI	GRCGYC	1 cut(s)	1397
BstAFI	CTTAAG	2 cut(s)	344, 1046
BstAPI	GCANNNNNTGC	1 cut(s)	1754
BstAUI	TGTACA	1 cut(s)	495
BstBI	TTCGAA	1 cut(s)	290
BstC8I	GCNNGC	4 cut(s)	53, 120, 126, 1759
BstDEI	CTNAG	8 cut(s)	108, 858, 873, 1153, 1800, 1805, 1836, 1872
BstDSI	CCRYGG	1 cut(s)	785
BstF5I	GGATG	9 cut(s)	231, 446, 599, 693, 755, 1216, 1265, 1477, 1519
BstFNI	CGCG	4 cut(s)	27, 124, 158, 213
BstH2I	RGCGCY	1 cut(s)	1410
BstHHI	GCGC	6 cut(s)	124, 130, 160, 177, 213, 1409
BstKTI	GATC	7 cut(s)	69, 440, 1071, 1531, 1624, 1709, 1834
BstMAI	GTCTC	1 cut(s)	1422
BstMBI	GATC	7 cut(s)	66, 437, 1068, 1528, 1621, 1706, 1831
BstMWI	GCNNNNNNNGC	7 cut(s)	15, 24, 136, 284, 395, 1754, 1801
BstNI	CCWGG	2 cut(s)	432, 1511
BstNSI	RCATGY	1 cut(s)	1201
BstPAI	GACNNNNGTC	1 cut(s)	1200
BstSCI	CCNGG	5 cut(s)	197, 430, 693, 1509, 1594
BstSFI	CTRYAG	2 cut(s)	944, 1541
BstSLI	GKGCMC	2 cut(s)	1118, 1678
BstUI	CGCG	4 cut(s)	27, 124, 158, 213
BstV1I	GCAGC	7 cut(s)	262, 799, 930, 958, 1527, 1595, 2017
BstV2I	GAAGAC	2 cut(s)	305, 918
BstX2I	RGATCY	4 cut(s)	437, 1528, 1706, 1831
BstYI	RGATCY	4 cut(s)	437, 1528, 1706, 1831
BstZ17I	GTATAC	1 cut(s)	1138
BsuRI	GGCC	8 cut(s)	9, 203, 519, 644, 692, 717, 1676, 1822
BtgI	CCRYGG	1 cut(s)	785
BtgZI	GCGATG	1 cut(s)	1953
BtsCI	GGATG	9 cut(s)	231, 446, 599, 693, 755, 1216, 1265, 1477, 1519
BtsIMutI	CAGTG	2 cut(s)	960, 1116
BveI	ACCTGC	1 cut(s)	1079
Cac8I	GCNNGC	4 cut(s)	53, 120, 126, 1759
CfoI	GCGC	6 cut(s)	124, 130, 160, 177, 213, 1409
Cfr10I	RCCGGY	1 cut(s)	118
CseI	GACGC	4 cut(s)	164, 202, 1386, 1404
Csp6I	GTAC	4 cut(s)	376, 496, 675, 753
CspCI	CAANNNNNGTGG	2 cut(s)	1868, 1903
CviAII	CATG	5 cut(s)	786, 1111, 1198, 1391, 1625
CviQI	GTAC	4 cut(s)	376, 496, 675, 753
DdeI	CTNAG	8 cut(s)	108, 858, 873, 1153, 1800, 1805, 1836, 1872
DpnI	GATC	7 cut(s)	68, 439, 1070, 1530, 1623, 1708, 1833
DpnII	GATC	7 cut(s)	66, 437, 1068, 1528, 1621, 1706, 1831
DriI	GACNNNNNGTC	1 cut(s)	922
EaeI	YGGCCR	2 cut(s)	642, 715
Eam1104I	CTCTTC	3 cut(s)	107, 824, 1699
Eam1105I	GACNNNNNGTC	1 cut(s)	922
EarI	CTCTTC	3 cut(s)	107, 824, 1699
EciI	GGCGGA	3 cut(s)	105, 126, 450
Ecl136II	GAGCTC	1 cut(s)	1164
Eco130I	CCWWGG	2 cut(s)	785, 1034
Eco147I	AGGCCT	1 cut(s)	9
Eco24I	GRGCYC	3 cut(s)	57, 1166, 1678
Eco47I	GGWCC	5 cut(s)	22, 195, 1038, 1454, 1589
Eco47III	AGCGCT	1 cut(s)	1408
Eco53kI	GAGCTC	1 cut(s)	1164
Eco57I	CTGAAG	4 cut(s)	904, 984, 1115, 1553
Eco88I	CYCGRG	1 cut(s)	476
EcoICRI	GAGCTC	1 cut(s)	1164
EcoO109I	RGGNCCY	4 cut(s)	201, 1674, 1675, 1820
EcoRI	GAATTC	2 cut(s)	1436, 1562
EcoRII	CCWGG	2 cut(s)	430, 1509
EcoT14I	CCWWGG	2 cut(s)	785, 1034
EcoT22I	ATGCAT	3 cut(s)	552, 599, 1750
EcoT38I	GRGCYC	3 cut(s)	57, 1166, 1678
ErhI	CCWWGG	2 cut(s)	785, 1034
Esp3I	CGTCTC	1 cut(s)	1422
FaeI	CATG	5 cut(s)	789, 1114, 1201, 1394, 1628
FalI	AAGNNNNNCTT	8 cut(s)	324, 356, 494, 526, 1678, 1710, 1884, 1916
FaqI	GGGAC	3 cut(s)	16, 397, 569
FatI	CATG	5 cut(s)	785, 1110, 1197, 1390, 1624
FauI	CCCGC	1 cut(s)	44
FauNDI	CATATG	1 cut(s)	737
FbaI	TGATCA	1 cut(s)	1621
FblI	GTMKAC	2 cut(s)	1137, 1993
Fnu4HI	GCNGC	8 cut(s)	161, 276, 813, 944, 947, 1541, 1584, 2006
FokI	GGATG	9 cut(s)	238, 433, 606, 700, 762, 1223, 1252, 1484, 1526
FriOI	GRGCYC	3 cut(s)	57, 1166, 1678
Fsp4HI	GCNGC	8 cut(s)	161, 276, 813, 944, 947, 1541, 1584, 2006
FspBI	CTAG	5 cut(s)	75, 390, 902, 1035, 1680
GlaI	GCGC	6 cut(s)	123, 129, 159, 176, 212, 1408
GluI	GCNGC	8 cut(s)	161, 276, 813, 944, 947, 1541, 1584, 2006
GsaI	CCCAGC	1 cut(s)	1174
GsuI	CTGGAG	3 cut(s)	344, 692, 1431
HaeII	RGCGCY	1 cut(s)	1410
HaeIII	GGCC	8 cut(s)	9, 203, 519, 644, 692, 717, 1676, 1822
HapII	CCGG	7 cut(s)	119, 198, 240, 695, 1269, 1596, 1981
HgaI	GACGC	4 cut(s)	164, 202, 1386, 1404
HhaI	GCGC	6 cut(s)	124, 130, 160, 177, 213, 1409
Hin1I	GRCGYC	1 cut(s)	1397
Hin1II	CATG	5 cut(s)	789, 1114, 1201, 1394, 1628
Hin6I	GCGC	6 cut(s)	122, 128, 158, 175, 211, 1407
HinP1I	GCGC	6 cut(s)	122, 128, 158, 175, 211, 1407
HincII	GTYRAC	2 cut(s)	1080, 1994
HindII	GTYRAC	2 cut(s)	1080, 1994
HpaII	CCGG	7 cut(s)	119, 198, 240, 695, 1269, 1596, 1981
HphI	GGTGA	3 cut(s)	836, 1656, 1956
Hpy166II	GTNNAC	8 cut(s)	151, 498, 1080, 1138, 1304, 1721, 1811, 1994
Hpy188I	TCNGA	8 cut(s)	98, 937, 1073, 1095, 1219, 1533, 1839, 1873
Hpy8I	GTNNAC	8 cut(s)	151, 498, 1080, 1138, 1304, 1721, 1811, 1994
Hpy99I	CGWCG	3 cut(s)	17, 62, 158
HpyAV	CCTTC	7 cut(s)	214, 286, 664, 901, 1068, 1090, 1516
HpyCH4III	ACNGT	5 cut(s)	757, 798, 1120, 1135, 1576
HpyF10VI	GCNNNNNNNGC	7 cut(s)	15, 24, 136, 284, 395, 1754, 1801
HpyF3I	CTNAG	8 cut(s)	108, 858, 873, 1153, 1800, 1805, 1836, 1872
Hsp92I	GRCGYC	1 cut(s)	1397
Hsp92II	CATG	5 cut(s)	789, 1114, 1201, 1394, 1628
HspAI	GCGC	6 cut(s)	122, 128, 158, 175, 211, 1407
Kpn2I	TCCGGA	2 cut(s)	239, 1268
KroI	GCCGGC	1 cut(s)	118
KroNI	GCCGGC	1 cut(s)	120
Ksp22I	TGATCA	1 cut(s)	1621
Kzo9I	GATC	7 cut(s)	66, 437, 1068, 1528, 1621, 1706, 1831
LmnI	GCTCC	7 cut(s)	319, 789, 1161, 1169, 1175, 1412, 1897
Lsp1109I	GCAGC	7 cut(s)	262, 799, 930, 958, 1527, 1595, 2017
LweI	GCATC	8 cut(s)	87, 584, 629, 871, 941, 1274, 1651, 1757
MaeI	CTAG	5 cut(s)	75, 390, 902, 1035, 1680
MaeIII	GTNAC	4 cut(s)	958, 1106, 1483, 1662
MalI	GATC	7 cut(s)	68, 439, 1070, 1530, 1623, 1708, 1833
MboI	GATC	7 cut(s)	66, 437, 1068, 1528, 1621, 1706, 1831
MfeI	CAATTG	1 cut(s)	1698
MflI	RGATCY	4 cut(s)	437, 1528, 1706, 1831
MhlI	GDGCHC	5 cut(s)	57, 1118, 1130, 1166, 1678
MlsI	TGGCCA	2 cut(s)	644, 717
MluNI	TGGCCA	2 cut(s)	644, 717
MlyI	GAGTC	3 cut(s)	38, 93, 488
MmeI	TCCRAC	3 cut(s)	399, 727, 1684
Mox20I	TGGCCA	2 cut(s)	644, 717
Mph1103I	ATGCAT	3 cut(s)	552, 599, 1750
MreI	CGCCGGCG	1 cut(s)	118
MroI	TCCGGA	2 cut(s)	239, 1268
MroNI	GCCGGC	1 cut(s)	118
MroXI	GAANNNNTTC	2 cut(s)	702, 1436
MscI	TGGCCA	2 cut(s)	644, 717
MseI	TTAA	5 cut(s)	258, 345, 600, 1047, 1569
MslI	CAYNNNNRTG	1 cut(s)	537
Msp20I	TGGCCA	2 cut(s)	644, 717
MspA1I	CMGCKG	3 cut(s)	51, 1207, 1586
MspCI	CTTAAG	2 cut(s)	344, 1046
MspI	CCGG	7 cut(s)	119, 198, 240, 695, 1269, 1596, 1981
MspR9I	CCNGG	5 cut(s)	199, 432, 695, 1511, 1596
MunI	CAATTG	1 cut(s)	1698
MvaI	CCWGG	2 cut(s)	432, 1511
MvnI	CGCG	4 cut(s)	27, 124, 158, 213
MwoI	GCNNNNNNNGC	7 cut(s)	15, 24, 136, 284, 395, 1754, 1801
NaeI	GCCGGC	1 cut(s)	120
NciI	CCSGG	3 cut(s)	199, 695, 1596
NcoI	CCATGG	1 cut(s)	785
NdeI	CATATG	1 cut(s)	737
NdeII	GATC	7 cut(s)	66, 437, 1068, 1528, 1621, 1706, 1831
NgoMIV	GCCGGC	1 cut(s)	118
NlaIII	CATG	5 cut(s)	789, 1114, 1201, 1394, 1628
NmeAIII	GCCGAG	1 cut(s)	1492
NmuCI	GTSAC	4 cut(s)	958, 1106, 1483, 1662
NsiI	ATGCAT	3 cut(s)	552, 599, 1750
NspI	RCATGY	1 cut(s)	1201
NspV	TTCGAA	1 cut(s)	290
PceI	AGGCCT	1 cut(s)	9
PciI	ACATGT	1 cut(s)	1197
PcsI	WCGNNNNNNNCGW	1 cut(s)	275
PdiI	GCCGGC	1 cut(s)	120
PdmI	GAANNNNTTC	2 cut(s)	702, 1436
PfeI	GAWTC	8 cut(s)	93, 166, 236, 349, 401, 1214, 1689, 1844
PfoI	TCCNGGA	1 cut(s)	1509
PkrI	GCNGC	8 cut(s)	162, 277, 814, 945, 948, 1542, 1585, 2007
PleI	GAGTC	3 cut(s)	37, 93, 487
PpsI	GAGTC	3 cut(s)	37, 93, 487
PscI	ACATGT	1 cut(s)	1197
PshAI	GACNNNNGTC	1 cut(s)	1200
PsiI	TTATAA	1 cut(s)	488
Psp124BI	GAGCTC	1 cut(s)	1166
Psp6I	CCWGG	2 cut(s)	430, 1509
PspFI	CCCAGC	1 cut(s)	1170
PspGI	CCWGG	2 cut(s)	430, 1509
PspOMI	GGGCCC	1 cut(s)	1674
PstI	CTGCAG	2 cut(s)	948, 1545
PsuI	RGATCY	4 cut(s)	437, 1528, 1706, 1831
PvuII	CAGCTG	2 cut(s)	1207, 1586
RsaI	GTAC	4 cut(s)	377, 497, 676, 754
RsaNI	GTAC	4 cut(s)	376, 496, 675, 753
RseI	CAYNNNNRTG	1 cut(s)	537
SacI	GAGCTC	1 cut(s)	1166
SalI	GTCGAC	1 cut(s)	1992
SaqAI	TTAA	5 cut(s)	258, 345, 600, 1047, 1569
SatI	GCNGC	8 cut(s)	161, 276, 813, 944, 947, 1541, 1584, 2006
Sau3AI	GATC	7 cut(s)	66, 437, 1068, 1528, 1621, 1706, 1831
SchI	GAGTC	3 cut(s)	38, 93, 488
ScrFI	CCNGG	5 cut(s)	199, 432, 695, 1511, 1596
SduI	GDGCHC	5 cut(s)	57, 1118, 1130, 1166, 1678
SfaNI	GCATC	8 cut(s)	87, 584, 629, 871, 941, 1274, 1651, 1757
SfcI	CTRYAG	2 cut(s)	944, 1541
SfuI	TTCGAA	1 cut(s)	290
SgrAI	CRCCGGYG	1 cut(s)	118
SinI	GGWCC	5 cut(s)	22, 195, 1038, 1454, 1589
SmiMI	CAYNNNNRTG	1 cut(s)	537
SmlI	CTYRAG	2 cut(s)	344, 1046
SmoI	CTYRAG	2 cut(s)	344, 1046
SseBI	AGGCCT	1 cut(s)	9
SsiI	CCGC	9 cut(s)	25, 43, 51, 116, 137, 161, 435, 1086, 1829
SspI	AATATT	1 cut(s)	412
SspMI	CTAG	5 cut(s)	75, 390, 902, 1035, 1680
SstI	GAGCTC	1 cut(s)	1166
StuI	AGGCCT	1 cut(s)	9
StyD4I	CCNGG	5 cut(s)	197, 430, 693, 1509, 1594
StyI	CCWWGG	2 cut(s)	785, 1034
TaaI	ACNGT	5 cut(s)	757, 798, 1120, 1135, 1576
TaqI	TCGA	9 cut(s)	60, 91, 234, 269, 290, 582, 623, 1067, 1993
TatI	WGTACW	2 cut(s)	495, 752
TauI	GCSGC	1 cut(s)	163
TfiI	GAWTC	8 cut(s)	93, 166, 236, 349, 401, 1214, 1689, 1844
Tru1I	TTAA	5 cut(s)	258, 345, 600, 1047, 1569
Tru9I	TTAA	5 cut(s)	258, 345, 600, 1047, 1569
TscAI	CASTG	2 cut(s)	967, 1123
TseFI	GTSAC	4 cut(s)	958, 1106, 1483, 1662
TseI	GCWGC	7 cut(s)	275, 812, 943, 946, 1540, 1583, 2005
Tsp45I	GTSAC	4 cut(s)	958, 1106, 1483, 1662
TspGWI	ACGGA	2 cut(s)	1502, 1828
TspRI	CASTG	2 cut(s)	967, 1123
Vha464I	CTTAAG	2 cut(s)	344, 1046
VpaK11BI	GGWCC	5 cut(s)	22, 195, 1038, 1454, 1589
XapI	RAATTY	5 cut(s)	422, 1247, 1436, 1562, 1788
XbaI	TCTAGA	1 cut(s)	901
XceI	RCATGY	1 cut(s)	1201
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1314
XmaJI	CCTAGG	1 cut(s)	1034
XmiI	GTMKAC	2 cut(s)	1137, 1993
XmnI	GAANNNNTTC	2 cut(s)	702, 1436
XspI	CTAG	5 cut(s)	75, 390, 902, 1035, 1680
Zsp2I	ATGCAT	3 cut(s)	552, 599, 1750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.