Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0006451

Physical Location & Seq

Genomic Coordinates Reverse (-)

41649081 .. 41653656

Gene Structure 4576 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00361000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGCAAGGCCTCGTCGGCTTGGTCCGCGAGTCCCTTGACTTCCGGACCAGCGGTCTCGTCGACAAGATCGGCTCCAGCATTAGAAAATCGCGAATCGGGCTTTTCGCTAGGCCTCCGGCGCCGCGTGCGCTTCCTCCGGTGGTCCCCGATGACGACGCGCCGCCGATTCGGTGGCGCAAGGGCGAGTTGATTGGGTCTGGTGCCTTCGGGCGGGTCTATATGGGGATGAATCTCGATTCCGGAGAGCTTATTGCCGTGAAACAGGTTTCGATTGCCGCAAGTAGTGCTTCAAAGGAGAAGACACAGGCTCATATTCGAGAGTTGGAGGAGGAAGTGAGGCTTCTTAAGAATCTTTCACACCCAAACATTGTTAGGTACTTGGGGACTGCTAGAGAAGCCGATTCGTTGAATATTCTGTTGGAGTTTGTGCCAGGTGGATCCATATCCTCCCTCTTGGGAAAATTTGGGTCCTTTCCCGAGTCTGTTATAAGAATGTACACAAAGCAACTGTTATTGGGCCTTGAATACCTACACAAGAATGGAATTATGCATAGGGACATCAAGGGTGCAAACATCCTTGTTGATAATAAGGGGTGCATTAAACTTGCAGACTTTGGTGCATCGAAGAAAGTTGTTGAACTGGCCACTATAAATGGTGCCAAGTCAATGAAGGGAACTCCTTATTGGATGGCTCCGGAAGTTATTCTCCAGACTGGTCATAGTTTCTCTGCTGACATATGGAGTGTTGGATGTACTGTGATTGAGATGGCTACCGGAAAGCCTCCATGGAGCCAACAGTATCAGGAGGTTGCTGCTCTCTTCCATATTGGAACAACAAAATCTCATCCACCCATTCCTGAGCATCTCTCTGCTGAGGCAAAGGATTTTCTATTAAAATGTCTAGAGAAGGAACCTGACTTCAGGTCTGCTGCGTCAGAACTGCTGCAGCACCCATTTGTCACTGGGGATTATCAGGAACCTCGCTCAGCATTACGCACTTCAGTTATGGAAGCTGGAAACCATATGGCAACACCTGGGACCAGTCTTAAGAACTCCATGAACGTTTCAATCAGAAGGTCAACCTGCGCAGGCTTGAAGGATATTTGCGACATGGGTAGTGTAAGGTGTTCAACTGTATACCCCAACAATATTTCAGGAGGGAGCTCCTGCTGGGGAGCAAATAATACTGATGATGACATGTGTCAGCTTGATGATTCTGATGATATAATGCTTGGTTCATTTGTAAAATTTAATTCTGTGATGGCATCAGGTGGATTAAACAAGAGTTTCAATCCCATGTGTGAACCAACTGATGACTGGCAATGTAAGTTTGATGAAAGTCTGGAGTTGAGAAAAAGTGGAATGAACTTGCCCCCTTGTCAAACAATACATGAGGCTTCAAGCAGCGCTGAAGCGTCTCATAAGGTGGAGAATGAATTCACATTTCCTTGTGGTCCATCAGTGGCTGAGGATGATGAAGAAGTCACAGAAACGAAAATAAGAGCCTTCCTAGATGAAAAGGCATTAGATCTGAAGAAGCTGCAGACACCGTTATTTGAAGAATTCTTTAGTACTTTGAATGCAGCTGGTCCCCCAGGTGCAATTGGAAATGCAAATTGTGATCGTGTTTCAAATAATCTGCATTTACCTCCTAAAAGCAAGTCACCCAGTCGGGCACCTAGTAGAAGATTCTCTGCAATAGTTGGAACTGTCAATGGTTCACGCTTCGGGAAACACACCCTAAATGTATCAAATGCAAGTGGTGTGCATAGTCATATCTTACAGGAAATTCAGCCGCCTCAGCTTAGTGAACGGAAAGGGCCTCTTGATTCTCAGAAAGATTCACTCAATGCAAGTGCAAGTTTTTCCGAGTTGCAAAGGAGGTGGAAAGAGGAGCTTGACGAAGAGTTAGAGAGGAAGCGAGGCAAGTCTTATGATATATTTTTCTGGCATAACCAACTTCTGTTTTGTATTTCTTGTCATTATAACTGTTCTCGTCTTATAAACAATAAATCTATTCTTGTCTTGATAACATATGGGGAAAAACTACATGATACAGAGATGAAACGCAAGGCTGGTTTAGGGATGAATACATCACCATCGCCAAACAACCGGATTATTAGTCGACAAAGAGAGCAGCAATGGGGTGTTTTCTCCACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

721

Amino Acids

79.46

Weight (kDa)

7.26

Isoelectric Point (pI)

48.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	59 - 320	8.3e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	61 - 316	6.4e-46	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	173 - 248	9.1e-06	Fungal protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06030
fragaria_vesca	FvH4_4g14910 FvH4_4g14910
malus_domestica	MD13G1186500.v1.1 MD16G1187200.v1.1
prunus_persica	Prupe.1G154200_v2.0.a1 Prupe.1G154200_v2.0.a1
pyrus_communis	pycom13g16140 pycom16g15720
rosa_chinensis	RchiOBHm_Chr4g0417171
rosa_laevigata	RLG00000007924
rosa_multiflora	Rmu_co8320689.1_g000001 Rmu_sc0000959.1_g000002 Rmu_sc0001643.1_g000003
rosa_roxburghii	Rroxscaffold_3G00245000 Rroxscaffold_5G00361000
rosa_rugosa	Rorug02G0282700 Rorug04G0146200
rosa_samantha	Rh2AG335100 Rh4AG209200 Rh4BG206100 Rh4BG206300 Rh4CG220200 Rh4DG206900 Rh5AG248600
rosa_wichuraiana	Rw4G017720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	488, 1986, 2003
Acc16I	TGCGCA	1 cut(s)	1087
Acc36I	ACCTGC	1 cut(s)	1091
AccB1I	GGYRCC	4 cut(s)	118, 200, 656, 1675
AccI	GTMKAC	3 cut(s)	60, 1137, 2125
AccII	CGCG	4 cut(s)	27, 91, 124, 158
AccIII	TCCGGA	3 cut(s)	42, 239, 694
AciI	CCGC	7 cut(s)	25, 51, 122, 161, 211, 276, 1796
AclI	AACGTT	1 cut(s)	1062
AclWI	GGATC	2 cut(s)	432, 445
AcoI	YGGCCR	1 cut(s)	642
AcsI	RAATTY	5 cut(s)	461, 1247, 1436, 1562, 1788
AcuI	CTGAAG	4 cut(s)	904, 984, 1431, 1553
AcyI	GRCGYC	1 cut(s)	119
AfaI	GTAC	4 cut(s)	377, 497, 754, 1573
AfeI	AGCGCT	1 cut(s)	1408
AfiI	CCNNNNNNNGG	1 cut(s)	210
AflII	CTTAAG	2 cut(s)	344, 1046
AflIII	ACRYGT	1 cut(s)	1197
AhdI	GACNNNNNGTC	2 cut(s)	51, 922
AjnI	CCWGG	3 cut(s)	430, 1033, 1594
AjuI	GAANNNNNNNTTGG	4 cut(s)	401, 433, 667, 699
AluBI	AGCT	8 cut(s)	247, 1013, 1164, 1207, 1540, 1586, 1804, 1897
AluI	AGCT	8 cut(s)	247, 1013, 1164, 1207, 1540, 1586, 1804, 1897
Alw21I	GWGCWC	1 cut(s)	1166
Alw26I	GTCTC	2 cut(s)	59, 1422
AlwI	GGATC	2 cut(s)	432, 445
AlwNI	CAGNNNCTG	1 cut(s)	1466
Ama87I	CYCGRG	1 cut(s)	476
Aor13HI	TCCGGA	3 cut(s)	42, 239, 694
Aor51HI	AGCGCT	1 cut(s)	1408
AoxI	GGCC	5 cut(s)	7, 110, 517, 642, 1820
ApeKI	GCWGC	8 cut(s)	812, 929, 943, 946, 1404, 1540, 1583, 2137
ApoI	RAATTY	5 cut(s)	461, 1247, 1436, 1562, 1788
Asp700I	GAANNNNTTC	2 cut(s)	702, 1436
AspLEI	GCGC	6 cut(s)	121, 130, 160, 177, 1088, 1409
AspS9I	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 1038, 1454, 1589, 1820
AsuHPI	GGTGA	2 cut(s)	1656, 2088
AvaI	CYCGRG	1 cut(s)	476
AvaII	GGWCC	7 cut(s)	22, 45, 142, 468, 1038, 1454, 1589
BaeGI	GKGCMC	1 cut(s)	1678
BalI	TGGCCA	1 cut(s)	644
BamHI	GGATCC	1 cut(s)	437
BanI	GGYRCC	4 cut(s)	118, 200, 656, 1675
BanII	GRGCYC	1 cut(s)	1166
BbsI	GAAGAC	1 cut(s)	305
Bbv12I	GWGCWC	1 cut(s)	1166
BbvCI	CCTCAGC	3 cut(s)	873, 1467, 1800
BbvI	GCAGC	8 cut(s)	799, 916, 930, 958, 1416, 1527, 1595, 2149
BccI	CCATC	5 cut(s)	682, 760, 1255, 1465, 2107
BceAI	ACGGC	1 cut(s)	239
BciT130I	CCWGG	3 cut(s)	432, 1035, 1596
BcoDI	GTCTC	2 cut(s)	59, 1422
BfaI	CTAG	5 cut(s)	108, 390, 902, 1511, 1680
BfmI	CTRYAG	2 cut(s)	944, 1541
BfoI	RGCGCY	2 cut(s)	122, 1410
BfrI	CTTAAG	2 cut(s)	344, 1046
BfuAI	ACCTGC	1 cut(s)	1091
BglI	GCCNNNNNGGC	1 cut(s)	15
BglII	AGATCT	1 cut(s)	1528
BlpI	GCTNAGC	1 cut(s)	985
BmcAI	AGTACT	1 cut(s)	1573
Bme1390I	CCNGG	3 cut(s)	432, 1035, 1596
Bme18I	GGWCC	7 cut(s)	22, 45, 142, 468, 1038, 1454, 1589
BmeRI	GACNNNNNGTC	2 cut(s)	51, 922
BmeT110I	CYCGRG	1 cut(s)	476
BmgT120I	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 1038, 1454, 1589, 1820
BmrFI	CCNGG	3 cut(s)	432, 1035, 1596
BmrI	ACTGGG	2 cut(s)	972, 1662
BmsI	GCATC	3 cut(s)	629, 871, 1274
BmuI	ACTGGG	2 cut(s)	972, 1662
BoxI	GACNNNNGTC	1 cut(s)	1200
BpiI	GAAGAC	1 cut(s)	305
BplI	GAGNNNNNCTC	2 cut(s)	851, 883
BpmI	CTGGAG	3 cut(s)	58, 692, 1364
Bpu10I	CCTNAGC	4 cut(s)	858, 873, 1467, 1800
Bpu1102I	GCTNAGC	1 cut(s)	985
BsaBI	GATNNNNATC	1 cut(s)	442
BsaHI	GRCGYC	1 cut(s)	119
BsaI	GGTCTC	1 cut(s)	59
BsaJI	CCNNGG	3 cut(s)	785, 1034, 1594
BsaWI	WCCGGW	6 cut(s)	42, 136, 239, 694, 773, 2112
Bsc4I	CCNNNNNNNGG	1 cut(s)	210
Bse1I	ACTGG	6 cut(s)	645, 718, 967, 1041, 1322, 1668
Bse3DI	GCAATG	2 cut(s)	1328, 2147
Bse8I	GATNNNNATC	1 cut(s)	442
BseAI	TCCGGA	3 cut(s)	42, 239, 694
BseBI	CCWGG	3 cut(s)	432, 1035, 1596
BseDI	CCNNGG	3 cut(s)	785, 1034, 1594
BseGI	GGATG	7 cut(s)	231, 573, 693, 755, 844, 1477, 2091
BseJI	GATNNNNATC	1 cut(s)	442
BseLI	CCNNNNNNNGG	1 cut(s)	210
BseMI	GCAATG	2 cut(s)	1328, 2147
BseMII	CTCAG	6 cut(s)	849, 864, 999, 1458, 1814, 1847
BseNI	ACTGG	6 cut(s)	645, 718, 967, 1041, 1322, 1668
BseRI	GAGGAG	2 cut(s)	341, 1907
BseSI	GKGCMC	1 cut(s)	1678
BseXI	GCAGC	8 cut(s)	799, 916, 930, 958, 1416, 1527, 1595, 2149
BseYI	CCCAGC	1 cut(s)	1170
Bsh1236I	CGCG	4 cut(s)	27, 91, 124, 158
BshFI	GGCC	5 cut(s)	9, 112, 519, 644, 1822
BshNI	GGYRCC	4 cut(s)	118, 200, 656, 1675
BsiHKAI	GWGCWC	1 cut(s)	1166
BsiHKCI	CYCGRG	1 cut(s)	476
BsiSI	CCGG	7 cut(s)	43, 116, 137, 240, 695, 774, 2113
BslFI	GGGAC	6 cut(s)	16, 128, 397, 569, 1051, 1575
BslI	CCNNNNNNNGG	1 cut(s)	210
BsmAI	GTCTC	2 cut(s)	59, 1422
BsmBI	CGTCTC	1 cut(s)	1422
BsmFI	GGGAC	6 cut(s)	16, 128, 397, 569, 1051, 1575
BsmI	GAATGC	1 cut(s)	1585
BsnI	GGCC	5 cut(s)	9, 112, 519, 644, 1822
Bso31I	GGTCTC	1 cut(s)	59
BsoBI	CYCGRG	1 cut(s)	476
Bsp1286I	GDGCHC	2 cut(s)	1166, 1678
Bsp13I	TCCGGA	3 cut(s)	42, 239, 694
Bsp1407I	TGTACA	1 cut(s)	495
Bsp143I	GATC	4 cut(s)	66, 437, 1528, 1621
Bsp1720I	GCTNAGC	1 cut(s)	985
Bsp19I	CCATGG	1 cut(s)	785
Bsp68I	TCGCGA	1 cut(s)	91
BspACI	CCGC	7 cut(s)	25, 51, 122, 161, 211, 276, 1796
BspANI	GGCC	5 cut(s)	9, 112, 519, 644, 1822
BspCNI	CTCAG	6 cut(s)	850, 865, 998, 1459, 1813, 1846
BspEI	TCCGGA	3 cut(s)	42, 239, 694
BspFNI	CGCG	4 cut(s)	27, 91, 124, 158
BspMAI	CTGCAG	2 cut(s)	948, 1545
BspMI	ACCTGC	1 cut(s)	1091
BspPI	GGATC	2 cut(s)	432, 445
BspT107I	GGYRCC	4 cut(s)	118, 200, 656, 1675
BspTI	CTTAAG	2 cut(s)	344, 1046
BspTNI	GGTCTC	1 cut(s)	59
BsrDI	GCAATG	2 cut(s)	1328, 2147
BsrGI	TGTACA	1 cut(s)	495
BsrI	ACTGG	6 cut(s)	645, 718, 967, 1041, 1322, 1668
BssECI	CCNNGG	3 cut(s)	785, 1034, 1594
BssMI	GATC	4 cut(s)	66, 437, 1528, 1621
BssNAI	GTATAC	1 cut(s)	1138
BssNI	GRCGYC	1 cut(s)	119
BssT1I	CCWWGG	1 cut(s)	785
Bst1107I	GTATAC	1 cut(s)	1138
Bst2UI	CCWGG	3 cut(s)	432, 1035, 1596
Bst4CI	ACNGT	7 cut(s)	510, 757, 798, 1135, 1551, 1711, 1991
Bst6I	CTCTTC	2 cut(s)	824, 1899
BstACI	GRCGYC	1 cut(s)	119
BstAFI	CTTAAG	2 cut(s)	344, 1046
BstAPI	GCANNNNNTGC	1 cut(s)	284
BstAUI	TGTACA	1 cut(s)	495
BstC8I	GCNNGC	2 cut(s)	126, 1090
BstDEI	CTNAG	7 cut(s)	858, 873, 985, 1467, 1800, 1805, 1833
BstDSI	CCRYGG	1 cut(s)	785
BstF5I	GGATG	7 cut(s)	231, 573, 693, 755, 844, 1477, 2091
BstFNI	CGCG	4 cut(s)	27, 91, 124, 158
BstH2I	RGCGCY	2 cut(s)	122, 1410
BstHHI	GCGC	6 cut(s)	121, 130, 160, 177, 1088, 1409
BstKTI	GATC	4 cut(s)	69, 440, 1531, 1624
BstMAI	GTCTC	2 cut(s)	59, 1422
BstMBI	GATC	4 cut(s)	66, 437, 1528, 1621
BstMWI	GCNNNNNNNGC	9 cut(s)	15, 24, 97, 118, 125, 127, 284, 395, 1801
BstNI	CCWGG	3 cut(s)	432, 1035, 1596
BstNSI	RCATGY	1 cut(s)	1201
BstPAI	GACNNNNGTC	1 cut(s)	1200
BstSCI	CCNGG	3 cut(s)	430, 1033, 1594
BstSFI	CTRYAG	2 cut(s)	944, 1541
BstSLI	GKGCMC	1 cut(s)	1678
BstUI	CGCG	4 cut(s)	27, 91, 124, 158
BstV1I	GCAGC	8 cut(s)	799, 916, 930, 958, 1416, 1527, 1595, 2149
BstV2I	GAAGAC	1 cut(s)	305
BstX2I	RGATCY	2 cut(s)	437, 1528
BstYI	RGATCY	2 cut(s)	437, 1528
BstZ17I	GTATAC	1 cut(s)	1138
BsuRI	GGCC	5 cut(s)	9, 112, 519, 644, 1822
BtgI	CCRYGG	1 cut(s)	785
BtgZI	GCGATG	1 cut(s)	2085
BtsCI	GGATG	7 cut(s)	231, 573, 693, 755, 844, 1477, 2091
BtsIMutI	CAGTG	2 cut(s)	960, 1467
BtuMI	TCGCGA	1 cut(s)	91
BveI	ACCTGC	1 cut(s)	1091
Cac8I	GCNNGC	2 cut(s)	126, 1090
CaiI	CAGNNNCTG	1 cut(s)	1466
CfoI	GCGC	6 cut(s)	121, 130, 160, 177, 1088, 1409
Cfr13I	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 1038, 1454, 1589, 1820
CseI	GACGC	3 cut(s)	164, 921, 1404
Csp6I	GTAC	4 cut(s)	376, 496, 753, 1572
CspCI	CAANNNNNGTGG	2 cut(s)	1865, 1900
CviAII	CATG	7 cut(s)	786, 1057, 1111, 1198, 1297, 1391, 2051
CviQI	GTAC	4 cut(s)	376, 496, 753, 1572
DdeI	CTNAG	7 cut(s)	858, 873, 985, 1467, 1800, 1805, 1833
DinI	GGCGCC	1 cut(s)	120
DpnI	GATC	4 cut(s)	68, 439, 1530, 1623
DpnII	GATC	4 cut(s)	66, 437, 1528, 1621
DriI	GACNNNNNGTC	2 cut(s)	51, 922
EaeI	YGGCCR	1 cut(s)	642
Eam1104I	CTCTTC	2 cut(s)	824, 1899
Eam1105I	GACNNNNNGTC	2 cut(s)	51, 922
EarI	CTCTTC	2 cut(s)	824, 1899
Ecl136II	GAGCTC	1 cut(s)	1164
Eco130I	CCWWGG	1 cut(s)	785
Eco147I	AGGCCT	2 cut(s)	9, 112
Eco24I	GRGCYC	1 cut(s)	1166
Eco31I	GGTCTC	1 cut(s)	59
Eco47I	GGWCC	7 cut(s)	22, 45, 142, 468, 1038, 1454, 1589
Eco47III	AGCGCT	1 cut(s)	1408
Eco53kI	GAGCTC	1 cut(s)	1164
Eco57I	CTGAAG	4 cut(s)	904, 984, 1431, 1553
Eco88I	CYCGRG	1 cut(s)	476
EcoICRI	GAGCTC	1 cut(s)	1164
EcoO109I	RGGNCCY	2 cut(s)	468, 1820
EcoRI	GAATTC	2 cut(s)	1436, 1562
EcoRII	CCWGG	3 cut(s)	430, 1033, 1594
EcoT14I	CCWWGG	1 cut(s)	785
EcoT22I	ATGCAT	1 cut(s)	552
EcoT38I	GRGCYC	1 cut(s)	1166
EgeI	GGCGCC	1 cut(s)	120
EheI	GGCGCC	1 cut(s)	120
ErhI	CCWWGG	1 cut(s)	785
Esp3I	CGTCTC	1 cut(s)	1422
FaeI	CATG	7 cut(s)	789, 1060, 1114, 1201, 1300, 1394, 2054
FalI	AAGNNNNNCTT	8 cut(s)	271, 303, 324, 356, 1809, 1841, 1881, 1913
FaqI	GGGAC	6 cut(s)	16, 128, 397, 569, 1051, 1575
FatI	CATG	7 cut(s)	785, 1056, 1110, 1197, 1296, 1390, 2050
FauI	CCCGC	1 cut(s)	204
FauNDI	CATATG	3 cut(s)	737, 1023, 2035
FblI	GTMKAC	3 cut(s)	60, 1137, 2125
FokI	GGATG	7 cut(s)	238, 560, 700, 762, 831, 1484, 2098
FriOI	GRGCYC	1 cut(s)	1166
FspBI	CTAG	5 cut(s)	108, 390, 902, 1511, 1680
FspI	TGCGCA	1 cut(s)	1087
GlaI	GCGC	6 cut(s)	120, 129, 159, 176, 1087, 1408
GsaI	CCCAGC	1 cut(s)	1174
GsuI	CTGGAG	3 cut(s)	58, 692, 1364
HaeII	RGCGCY	2 cut(s)	122, 1410
HaeIII	GGCC	5 cut(s)	9, 112, 519, 644, 1822
HapII	CCGG	7 cut(s)	43, 116, 137, 240, 695, 774, 2113
HgaI	GACGC	3 cut(s)	164, 921, 1404
HhaI	GCGC	6 cut(s)	121, 130, 160, 177, 1088, 1409
Hin1I	GRCGYC	1 cut(s)	119
Hin1II	CATG	7 cut(s)	789, 1060, 1114, 1201, 1300, 1394, 2054
Hin6I	GCGC	6 cut(s)	119, 128, 158, 175, 1086, 1407
HinP1I	GCGC	6 cut(s)	119, 128, 158, 175, 1086, 1407
HincII	GTYRAC	3 cut(s)	61, 1080, 2126
HindII	GTYRAC	3 cut(s)	61, 1080, 2126
HpaII	CCGG	7 cut(s)	43, 116, 137, 240, 695, 774, 2113
HphI	GGTGA	2 cut(s)	1656, 2088
Hpy166II	GTNNAC	8 cut(s)	61, 498, 1080, 1138, 1304, 1721, 1811, 2126
Hpy188I	TCNGA	6 cut(s)	937, 1073, 1219, 1533, 1836, 1870
Hpy8I	GTNNAC	8 cut(s)	61, 498, 1080, 1138, 1304, 1721, 1811, 2126
Hpy99I	CGWCG	3 cut(s)	17, 62, 158
HpyAV	CCTTC	6 cut(s)	214, 664, 901, 1068, 1090, 1516
HpyCH4III	ACNGT	7 cut(s)	510, 757, 798, 1135, 1551, 1711, 1991
HpyCH4IV	ACGT	1 cut(s)	1062
HpyF10VI	GCNNNNNNNGC	9 cut(s)	15, 24, 97, 118, 125, 127, 284, 395, 1801
HpyF3I	CTNAG	7 cut(s)	858, 873, 985, 1467, 1800, 1805, 1833
HpySE526I	ACGT	1 cut(s)	1062
Hsp92I	GRCGYC	1 cut(s)	119
Hsp92II	CATG	7 cut(s)	789, 1060, 1114, 1201, 1300, 1394, 2054
HspAI	GCGC	6 cut(s)	119, 128, 158, 175, 1086, 1407
KasI	GGCGCC	1 cut(s)	118
Kpn2I	TCCGGA	3 cut(s)	42, 239, 694
Kzo9I	GATC	4 cut(s)	66, 437, 1528, 1621
LmnI	GCTCC	7 cut(s)	77, 697, 789, 1161, 1169, 1175, 1894
Lsp1109I	GCAGC	8 cut(s)	799, 916, 930, 958, 1416, 1527, 1595, 2149
LweI	GCATC	3 cut(s)	629, 871, 1274
MaeI	CTAG	5 cut(s)	108, 390, 902, 1511, 1680
MaeII	ACGT	1 cut(s)	1062
MaeIII	GTNAC	3 cut(s)	958, 1483, 1662
MalI	GATC	4 cut(s)	68, 439, 1530, 1623
MboI	GATC	4 cut(s)	66, 437, 1528, 1621
MboII	GAAGA	8 cut(s)	310, 637, 811, 1490, 1546, 1571, 1698, 1916
MfeI	CAATTG	1 cut(s)	1602
MflI	RGATCY	2 cut(s)	437, 1528
MhlI	GDGCHC	2 cut(s)	1166, 1678
MlsI	TGGCCA	1 cut(s)	644
MluCI	AATT	9 cut(s)	461, 543, 1247, 1252, 1436, 1562, 1602, 1615, 1788
MluNI	TGGCCA	1 cut(s)	644
Mly113I	GGCGCC	1 cut(s)	119
MlyI	GAGTC	2 cut(s)	38, 488
MmeI	TCCRAC	4 cut(s)	303, 399, 727, 1684
Mox20I	TGGCCA	1 cut(s)	644
Mph1103I	ATGCAT	1 cut(s)	552
MroI	TCCGGA	3 cut(s)	42, 239, 694
MroXI	GAANNNNTTC	2 cut(s)	702, 1436
MscI	TGGCCA	1 cut(s)	644
MseI	TTAA	6 cut(s)	345, 600, 893, 1047, 1251, 1277
MslI	CAYNNNNRTG	1 cut(s)	537
Msp20I	TGGCCA	1 cut(s)	644
MspA1I	CMGCKG	2 cut(s)	51, 1586
MspCI	CTTAAG	2 cut(s)	344, 1046
MspI	CCGG	7 cut(s)	43, 116, 137, 240, 695, 774, 2113
MspR9I	CCNGG	3 cut(s)	432, 1035, 1596
MunI	CAATTG	1 cut(s)	1602
Mva1269I	GAATGC	1 cut(s)	1585
MvaI	CCWGG	3 cut(s)	432, 1035, 1596
MvnI	CGCG	4 cut(s)	27, 91, 124, 158
MwoI	GCNNNNNNNGC	9 cut(s)	15, 24, 97, 118, 125, 127, 284, 395, 1801
NarI	GGCGCC	1 cut(s)	119
NcoI	CCATGG	1 cut(s)	785
NdeI	CATATG	3 cut(s)	737, 1023, 2035
NdeII	GATC	4 cut(s)	66, 437, 1528, 1621
NlaIII	CATG	7 cut(s)	789, 1060, 1114, 1201, 1300, 1394, 2054
NmuCI	GTSAC	3 cut(s)	958, 1483, 1662
NruI	TCGCGA	1 cut(s)	91
NsbI	TGCGCA	1 cut(s)	1087
NsiI	ATGCAT	1 cut(s)	552
NspI	RCATGY	1 cut(s)	1201
PceI	AGGCCT	2 cut(s)	9, 112
PciI	ACATGT	1 cut(s)	1197
PctI	GAATGC	1 cut(s)	1585
PdmI	GAANNNNTTC	2 cut(s)	702, 1436
PleI	GAGTC	2 cut(s)	37, 487
PluTI	GGCGCC	1 cut(s)	122
PpsI	GAGTC	2 cut(s)	37, 487
PpuMI	RGGWCCY	1 cut(s)	468
PscI	ACATGT	1 cut(s)	1197
PshAI	GACNNNNGTC	1 cut(s)	1200
PsiI	TTATAA	3 cut(s)	488, 1986, 2003
Psp124BI	GAGCTC	1 cut(s)	1166
Psp1406I	AACGTT	1 cut(s)	1062
Psp5II	RGGWCCY	1 cut(s)	468
Psp6I	CCWGG	3 cut(s)	430, 1033, 1594
PspFI	CCCAGC	1 cut(s)	1170
PspGI	CCWGG	3 cut(s)	430, 1033, 1594
PspPI	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 1038, 1454, 1589, 1820
PspPPI	RGGWCCY	1 cut(s)	468
PstI	CTGCAG	2 cut(s)	948, 1545
PstNI	CAGNNNCTG	1 cut(s)	1466
PsuI	RGATCY	2 cut(s)	437, 1528
PvuII	CAGCTG	1 cut(s)	1586
RruI	TCGCGA	1 cut(s)	91
RsaI	GTAC	4 cut(s)	377, 497, 754, 1573
RsaNI	GTAC	4 cut(s)	376, 496, 753, 1572
RseI	CAYNNNNRTG	1 cut(s)	537
SacI	GAGCTC	1 cut(s)	1166
SalI	GTCGAC	2 cut(s)	59, 2124
SaqAI	TTAA	6 cut(s)	345, 600, 893, 1047, 1251, 1277
Sau3AI	GATC	4 cut(s)	66, 437, 1528, 1621
Sau96I	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 1038, 1454, 1589, 1820
ScaI	AGTACT	1 cut(s)	1573
SchI	GAGTC	2 cut(s)	38, 488
ScrFI	CCNGG	3 cut(s)	432, 1035, 1596
SduI	GDGCHC	2 cut(s)	1166, 1678
SfaNI	GCATC	3 cut(s)	629, 871, 1274
SfcI	CTRYAG	2 cut(s)	944, 1541
SfoI	GGCGCC	1 cut(s)	120
SinI	GGWCC	7 cut(s)	22, 45, 142, 468, 1038, 1454, 1589
SmiMI	CAYNNNNRTG	1 cut(s)	537
SmlI	CTYRAG	2 cut(s)	344, 1046
SmoI	CTYRAG	2 cut(s)	344, 1046
Sse9I	AATT	9 cut(s)	461, 543, 1247, 1252, 1436, 1562, 1602, 1615, 1788
SseBI	AGGCCT	2 cut(s)	9, 112
SsiI	CCGC	7 cut(s)	25, 51, 122, 161, 211, 276, 1796
SspDI	GGCGCC	1 cut(s)	118
SspI	AATATT	2 cut(s)	412, 1150
SspMI	CTAG	5 cut(s)	108, 390, 902, 1511, 1680
SstI	GAGCTC	1 cut(s)	1166
StuI	AGGCCT	2 cut(s)	9, 112
StyD4I	CCNGG	3 cut(s)	430, 1033, 1594
StyI	CCWWGG	1 cut(s)	785
TaaI	ACNGT	7 cut(s)	510, 757, 798, 1135, 1551, 1711, 1991
TaiI	ACGT	1 cut(s)	1065
TaqI	TCGA	6 cut(s)	60, 234, 269, 316, 623, 2125
TasI	AATT	9 cut(s)	461, 543, 1247, 1252, 1436, 1562, 1602, 1615, 1788
TatI	WGTACW	3 cut(s)	495, 752, 1571
TauI	GCSGC	4 cut(s)	124, 163, 278, 1798
Tru1I	TTAA	6 cut(s)	345, 600, 893, 1047, 1251, 1277
Tru9I	TTAA	6 cut(s)	345, 600, 893, 1047, 1251, 1277
TscAI	CASTG	2 cut(s)	967, 1467
TseFI	GTSAC	3 cut(s)	958, 1483, 1662
TseI	GCWGC	8 cut(s)	812, 929, 943, 946, 1404, 1540, 1583, 2137
Tsp45I	GTSAC	3 cut(s)	958, 1483, 1662
TspGWI	ACGGA	1 cut(s)	1828
TspRI	CASTG	2 cut(s)	967, 1467
Vha464I	CTTAAG	2 cut(s)	344, 1046
VpaK11BI	GGWCC	7 cut(s)	22, 45, 142, 468, 1038, 1454, 1589
XapI	RAATTY	5 cut(s)	461, 1247, 1436, 1562, 1788
XbaI	TCTAGA	1 cut(s)	901
XceI	RCATGY	1 cut(s)	1201
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1314
XmiI	GTMKAC	3 cut(s)	60, 1137, 2125
XmnI	GAANNNNTTC	2 cut(s)	702, 1436
XspI	CTAG	5 cut(s)	108, 390, 902, 1511, 1680
ZrmI	AGTACT	1 cut(s)	1573
Zsp2I	ATGCAT	1 cut(s)	552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.