Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006451

Physical Location & Seq

Genomic Coordinates Forward (+)

15874423 .. 15879408

Gene Structure 4986 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1186500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGCGATGAGCCCCAACGACCGACCTAAAAAGAAAACCTTAACACCGATGCAAGGCCTCGTCGGCTTGATCCGCGAGTCCCTGCCGCTTCTGCCCCCGCGCCGGGATGACGGAGGAGGTGGAGGAGGAGGGTTTGGGGGCCTGGTGGGGAAGGTCCGCTCCAGCCTCCGTAATTCGCGAATCGGACTGCTATCCAAGTCTCCTGTTCGTGCTCTTCCTTCGGTTGCTTCGAGAGATGACGCACCGCCGATTCGGTGGCGCAAAGGCGAGTTGATTGGTTCCGGTGCCTTTGGCCGGGTCTACATGGGAATGAACCTCGATTCCGGAGAGCTTTTCGCTGTGAAACAGGTGTTGATTGCGGCAAATAGTGCTTCGAAGGAGAAGACACAGGCTCACATTCGAGAGTTGGAGGAGGAAGTCAAGCTTCTTAAGAATCTTTCACATCCAAACATTGTTAGGTACTTGGGGACCGCTAGAGAGGAGGATTCATTGAATATTCTATTGGAGTTTGTGCCTGGTGGATCCATATCGTCCCTCTTGGGGAAATTTGGATCCTTTCCTGAGTCTGTTATAAGAATGTACACAAAGCAGCTGTTACTGGGTCTTGAATACCTTCACAAGAATGAAATTATGCATAGGGACATCAAGGGTGCAAACATCCTCGTGGATAATAAAGGGTGTATTAAACTTGCTGACTTTGGTGCATCAAAGAAAGTTGTTGAACTGGCTACTATAAATGGTGCCAAGTCAATGAAGGGTACTCCATACTGGATGGCTCCTGAAGTTATTCTCCAGACTGGCCATAGCTTCTCTGCTGACATATGGAGTGTTGGATGTACTGTGATTGAGATGGCTACAGGAAAGCCTCCATGGAGCCAACAATATCAAGAGGTTGCTGCTCTTTTCCATATTGGAACAACAAAATCTCATCCACCCATCCCTGAGCATCTCTCTGCTGAGGCAAAGGATTTTCTGTTAAAATGCCTAGAGAAGGAACCTTATCTAAGGTCTTCTGCGTCAGAGTTGGTGCAGCATCCATTTGTCACTGGGGATTACCAGGAACCTCGTCCAGTAGTTCGTTCTTCATTCATGGAAGCTGGAAACGAGAAGGCAGCACCTGGGACAGATCTTAAGAACTTTGTGAACCCTTCAATCAGAAGGTCTACCTGTGCCGGCTTGAAGGATATTTGTGATATGGGCACTGTAAGGTGCTCAACTGTATATCGAGGGAATTTTTCAGGAGGGAGCTCCTGCTGGGGAGCTACTAATAACCATGATGACGACATGTGTCAGATTGATGATACGAATGACATTGTCCTTGGTTCATTTGCAAAATTCAGATCTGTGGTTGGACCTGACGAATTAAACAAGAGTTTCAATCCCATGTGTGAACCAACTGACAACTGGCCATGCAAGTTTGATGAAAGTCTGGAACCGGAGAGAAATGGAATTAACTTCTCCCCTTGTCAAACAATACATGAGGCTTCGGGCAGCATTGGAGCATCTCAAAAGGTGGAGACAGAGTTCACATTTCCTTCCGGGCCATCAGCAGTTGAGGATGATGAGGAAGTTACAGAGTCAAAAATAAGAGCCTTCCTAGACGAAAAGGCCTTAGATCTGAAGAAGCTGCAAACACCTCTATATGAAGAGTTTCGTAGCTCATTGAATGCAGCTGGTATTGGAAATGCAGACTGTCAACATGTTTCAAAGCATCTGAACTTACCTCCTAAAAGTAAGTCACCGAGTCATGCACCTAGTAGAAGATTCTCTACTGCATTTGATGCTGCAGGCCCTGGGAAACATACAAGAGATGTATCAAATGCCAGTGGTGTACATGACCGAGTTTTGCAGGAAATTCAGCCACCTCAGCTTAGTGAATGGAAAGTGCTCCCTCATGATCAGAAAGAATCATTTAGTCTAAGTGCAAGCTTTTCTGATATGCAAAGAAAGTGGAAACAGGAGCTTGATGAAGAGCTCGAGAGGAAGCGAGAGATGATGTGGCAGGCTGGTGTAGGAACGAAAATGCCATCCCCAACCAAAATTCTAAGTCGACAAAGAGAGCGGCTACGGATGGGTTTTCCTGGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

697

Amino Acids

76.63

Weight (kDa)

7.9

Isoelectric Point (pI)

48.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	87 - 348	6.3e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	89 - 344	2.9e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06030
fragaria_vesca	FvH4_4g14910 FvH4_4g14910
malus_domestica	MD13G1186500.v1.1 MD16G1187200.v1.1
prunus_persica	Prupe.1G154200_v2.0.a1 Prupe.1G154200_v2.0.a1
pyrus_communis	pycom13g16140 pycom16g15720
rosa_chinensis	RchiOBHm_Chr4g0417171
rosa_laevigata	RLG00000007924
rosa_multiflora	Rmu_co8320689.1_g000001 Rmu_sc0000959.1_g000002 Rmu_sc0001643.1_g000003
rosa_roxburghii	Rroxscaffold_3G00245000 Rroxscaffold_5G00361000
rosa_rugosa	Rorug02G0282700 Rorug04G0146200
rosa_samantha	Rh2AG335100 Rh4AG209200 Rh4BG206100 Rh4BG206300 Rh4CG220200 Rh4DG206900 Rh5AG248600
rosa_wichuraiana	Rw4G017720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	572
AccB1I	GGYRCC	2 cut(s)	284, 740
AccBSI	CCGCTC	2 cut(s)	159, 2062
AccI	GTMKAC	3 cut(s)	300, 1163, 2050
AccII	CGCG	3 cut(s)	75, 100, 178
AccIII	TCCGGA	1 cut(s)	323
AciI	CCGC	8 cut(s)	73, 86, 98, 157, 245, 359, 471, 2062
AclWI	GGATC	5 cut(s)	64, 516, 529, 546, 559
AcoI	YGGCCR	3 cut(s)	292, 799, 1406
AcsI	RAATTY	5 cut(s)	545, 1231, 1334, 1854, 2040
AcuI	CTGAAG	2 cut(s)	801, 1640
AfaI	GTAC	5 cut(s)	461, 581, 760, 838, 1833
AfiI	CCNNNNNNNGG	6 cut(s)	53, 102, 103, 294, 540, 991
AflII	CTTAAG	2 cut(s)	428, 1130
AflIII	ACRYGT	2 cut(s)	1284, 1699
AgsI	TTSAA	8 cut(s)	493, 608, 722, 1152, 1180, 1378, 1666, 1707
AjnI	CCWGG	6 cut(s)	141, 514, 1056, 1117, 1792, 2080
AjuI	GAANNNNNNNTTGG	2 cut(s)	485, 517
AloI	GAACNNNNNNTCC	4 cut(s)	305, 337, 1508, 1540
Alw21I	GWGCWC	5 cut(s)	214, 1214, 1250, 1890, 1977
Alw26I	GTCTC	2 cut(s)	204, 1511
AlwI	GGATC	5 cut(s)	64, 516, 529, 546, 559
AlwNI	CAGNNNCTG	2 cut(s)	1118, 1793
Ama87I	CYCGRG	1 cut(s)	1976
Aor13HI	TCCGGA	1 cut(s)	323
AoxI	GGCC	8 cut(s)	55, 139, 292, 799, 1406, 1541, 1608, 1789
ApeKI	GCWGC	8 cut(s)	589, 896, 1030, 1112, 1491, 1627, 1670, 1784
ApoI	RAATTY	5 cut(s)	545, 1231, 1334, 1854, 2040
Asp700I	GAANNNNTTC	3 cut(s)	612, 786, 1650
AspLEI	GCGC	2 cut(s)	102, 261
AspS9I	GGNCC	6 cut(s)	139, 154, 468, 1352, 1541, 1790
AsuC2I	CCSGG	3 cut(s)	104, 296, 1540
AsuHPI	GGTGA	1 cut(s)	1731
AsuII	TTCGAA	1 cut(s)	374
AvaI	CYCGRG	1 cut(s)	1976
AvaII	GGWCC	3 cut(s)	154, 468, 1352
BaeGI	GKGCMC	1 cut(s)	1202
BalI	TGGCCA	2 cut(s)	801, 1408
BamHI	GGATCC	2 cut(s)	521, 551
BanI	GGYRCC	2 cut(s)	284, 740
BanII	GRGCYC	3 cut(s)	14, 1250, 1977
BarI	GAAGNNNNNNTAC	2 cut(s)	1753, 1785
BauI	CACGAG	1 cut(s)	662
BbsI	GAAGAC	2 cut(s)	389, 1002
Bbv12I	GWGCWC	5 cut(s)	214, 1214, 1250, 1890, 1977
BbvCI	CCTCAGC	2 cut(s)	957, 1866
BbvI	GCAGC	8 cut(s)	601, 883, 1042, 1124, 1503, 1614, 1682, 1771
BccI	CCATC	6 cut(s)	766, 844, 944, 1552, 2035, 2065
BciT130I	CCWGG	6 cut(s)	143, 516, 1058, 1119, 1794, 2082
BclI	TGATCA	1 cut(s)	1897
BcnI	CCSGG	3 cut(s)	104, 296, 1540
BcoDI	GTCTC	2 cut(s)	204, 1511
BfaI	CTAG	4 cut(s)	474, 986, 1598, 1755
BfmI	CTRYAG	2 cut(s)	855, 1785
BfrI	CTTAAG	2 cut(s)	428, 1130
BglI	GCCNNNNNGGC	1 cut(s)	63
BglII	AGATCT	3 cut(s)	1126, 1340, 1615
Bme1390I	CCNGG	9 cut(s)	104, 143, 296, 516, 1058, 1119, 1540, 1794, 2082
Bme18I	GGWCC	3 cut(s)	154, 468, 1352
BmeT110I	CYCGRG	1 cut(s)	1976
BmgT120I	GGNCC	6 cut(s)	139, 154, 468, 1352, 1541, 1790
BmrFI	CCNGG	9 cut(s)	104, 143, 296, 516, 1058, 1119, 1540, 1794, 2082
BmrI	ACTGGG	2 cut(s)	608, 1056
BmsI	GCATC	7 cut(s)	39, 713, 955, 1042, 1511, 1720, 1771
BmuI	ACTGGG	2 cut(s)	608, 1056
BoxI	GACNNNNGTC	1 cut(s)	1287
BpiI	GAAGAC	2 cut(s)	389, 1002
BplI	GAGNNNNNCTC	2 cut(s)	935, 967
BpmI	CTGGAG	2 cut(s)	145, 776
Bpu10I	CCTNAGC	3 cut(s)	942, 957, 1866
Bpu14I	TTCGAA	1 cut(s)	374
BpuMI	CCSGG	3 cut(s)	104, 296, 1540
BsaBI	GATNNNNATC	1 cut(s)	526
BsaJI	CCNNGG	5 cut(s)	869, 1118, 1318, 1792, 1793
BsaWI	WCCGGW	3 cut(s)	281, 323, 1435
BsaXI	ACNNNNNCTCC	2 cut(s)	1508, 1538
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 102, 103, 294, 540, 991
Bse118I	RCCGGY	1 cut(s)	1172
Bse1I	ACTGG	8 cut(s)	603, 729, 773, 802, 1051, 1070, 1409, 1824
Bse8I	GATNNNNATC	1 cut(s)	526
BseAI	TCCGGA	1 cut(s)	323
BseBI	CCWGG	6 cut(s)	143, 516, 1058, 1119, 1794, 2082
BseDI	CCNNGG	5 cut(s)	869, 1118, 1318, 1792, 1793
BseJI	GATNNNNATC	1 cut(s)	526
BseLI	CCNNNNNNNGG	6 cut(s)	53, 102, 103, 294, 540, 991
BseMII	CTCAG	4 cut(s)	552, 933, 948, 1880
BseNI	ACTGG	8 cut(s)	603, 729, 773, 802, 1051, 1070, 1409, 1824
BseRI	GAGGAG	5 cut(s)	129, 138, 141, 425, 494
BseSI	GKGCMC	1 cut(s)	1202
BseXI	GCAGC	8 cut(s)	601, 883, 1042, 1124, 1503, 1614, 1682, 1771
BseYI	CCCAGC	1 cut(s)	1254
BsgI	GTGCAG	1 cut(s)	1049
Bsh1236I	CGCG	3 cut(s)	75, 100, 178
Bsh1285I	CGRYCG	1 cut(s)	22
BshFI	GGCC	8 cut(s)	57, 141, 294, 801, 1408, 1543, 1610, 1791
BshNI	GGYRCC	2 cut(s)	284, 740
BsiEI	CGRYCG	1 cut(s)	22
BsiHKAI	GWGCWC	5 cut(s)	214, 1214, 1250, 1890, 1977
BsiHKCI	CYCGRG	1 cut(s)	1976
BsiSI	CCGG	7 cut(s)	103, 282, 295, 324, 1173, 1436, 1539
BslFI	GGGAC	5 cut(s)	64, 481, 517, 653, 1135
BslI	CCNNNNNNNGG	6 cut(s)	53, 102, 103, 294, 540, 991
BsmAI	GTCTC	2 cut(s)	204, 1511
BsmFI	GGGAC	5 cut(s)	64, 481, 517, 653, 1135
BsmI	GAATGC	1 cut(s)	1672
BsnI	GGCC	8 cut(s)	57, 141, 294, 801, 1408, 1543, 1610, 1791
BsoBI	CYCGRG	1 cut(s)	1976
Bsp119I	TTCGAA	1 cut(s)	374
Bsp1286I	GDGCHC	7 cut(s)	14, 214, 1202, 1214, 1250, 1890, 1977
Bsp13I	TCCGGA	1 cut(s)	323
Bsp1407I	TGTACA	2 cut(s)	579, 1831
Bsp143I	GATC	7 cut(s)	69, 521, 551, 1126, 1340, 1615, 1897
Bsp19I	CCATGG	1 cut(s)	869
Bsp68I	TCGCGA	1 cut(s)	178
BspACI	CCGC	8 cut(s)	73, 86, 98, 157, 245, 359, 471, 2062
BspANI	GGCC	8 cut(s)	57, 141, 294, 801, 1408, 1543, 1610, 1791
BspCNI	CTCAG	4 cut(s)	553, 934, 949, 1879
BspEI	TCCGGA	1 cut(s)	323
BspFNI	CGCG	3 cut(s)	75, 100, 178
BspHI	TCATGA	1 cut(s)	1894
BspMAI	CTGCAG	1 cut(s)	1789
BspPI	GGATC	5 cut(s)	64, 516, 529, 546, 559
BspQI	GCTCTTC	2 cut(s)	219, 1965
BspT104I	TTCGAA	1 cut(s)	374
BspT107I	GGYRCC	2 cut(s)	284, 740
BspTI	CTTAAG	2 cut(s)	428, 1130
BsrBI	CCGCTC	2 cut(s)	159, 2062
BsrFI	RCCGGY	1 cut(s)	1172
BsrGI	TGTACA	2 cut(s)	579, 1831
BsrI	ACTGG	8 cut(s)	603, 729, 773, 802, 1051, 1070, 1409, 1824
BssAI	RCCGGY	1 cut(s)	1172
BssECI	CCNNGG	5 cut(s)	869, 1118, 1318, 1792, 1793
BssMI	GATC	7 cut(s)	69, 521, 551, 1126, 1340, 1615, 1897
BssSI	CACGAG	1 cut(s)	662
BssT1I	CCWWGG	2 cut(s)	869, 1318
Bst2BI	CACGAG	1 cut(s)	662
Bst2UI	CCWGG	6 cut(s)	143, 516, 1058, 1119, 1794, 2082
Bst4CI	ACNGT	4 cut(s)	841, 1204, 1219, 1694
Bst6I	CTCTTC	3 cut(s)	219, 1641, 1965
BstAFI	CTTAAG	2 cut(s)	428, 1130
BstAPI	GCANNNNNTGC	2 cut(s)	368, 1781
BstAUI	TGTACA	2 cut(s)	579, 1831
BstBI	TTCGAA	1 cut(s)	374
BstC8I	GCNNGC	4 cut(s)	1174, 1789, 1927, 2004
BstDEI	CTNAG	9 cut(s)	561, 942, 957, 1004, 1612, 1866, 1871, 1919, 2045
BstDSI	CCRYGG	1 cut(s)	869
BstENI	CCTNNNNNAGG	1 cut(s)	989
BstFNI	CGCG	3 cut(s)	75, 100, 178
BstHHI	GCGC	2 cut(s)	102, 261
BstKTI	GATC	7 cut(s)	72, 524, 554, 1129, 1343, 1618, 1900
BstMAI	GTCTC	2 cut(s)	204, 1511
BstMBI	GATC	7 cut(s)	69, 521, 551, 1126, 1340, 1615, 1897
BstMCI	CGRYCG	1 cut(s)	22
BstMWI	GCNNNNNNNGC	6 cut(s)	63, 72, 91, 368, 1781, 1867
BstNI	CCWGG	6 cut(s)	143, 516, 1058, 1119, 1794, 2082
BstNSI	RCATGY	2 cut(s)	1288, 1703
BstPAI	GACNNNNGTC	1 cut(s)	1287
BstSCI	CCNGG	9 cut(s)	102, 141, 294, 514, 1056, 1117, 1538, 1792, 2080
BstSFI	CTRYAG	2 cut(s)	855, 1785
BstSLI	GKGCMC	1 cut(s)	1202
BstUI	CGCG	3 cut(s)	75, 100, 178
BstV1I	GCAGC	8 cut(s)	601, 883, 1042, 1124, 1503, 1614, 1682, 1771
BstV2I	GAAGAC	2 cut(s)	389, 1002
BstX2I	RGATCY	5 cut(s)	521, 551, 1126, 1340, 1615
BstYI	RGATCY	5 cut(s)	521, 551, 1126, 1340, 1615
BsuRI	GGCC	8 cut(s)	57, 141, 294, 801, 1408, 1543, 1610, 1791
BtgI	CCRYGG	1 cut(s)	869
BtgZI	GCGATG	1 cut(s)	20
BtsIMutI	CAGTG	3 cut(s)	1044, 1200, 1831
BtuMI	TCGCGA	1 cut(s)	178
Cac8I	GCNNGC	4 cut(s)	1174, 1789, 1927, 2004
CaiI	CAGNNNCTG	2 cut(s)	1118, 1793
CciI	TCATGA	1 cut(s)	1894
CfoI	GCGC	2 cut(s)	102, 261
Cfr10I	RCCGGY	1 cut(s)	1172
Cfr13I	GGNCC	6 cut(s)	139, 154, 468, 1352, 1541, 1790
CseI	GACGC	2 cut(s)	248, 1005
Csp6I	GTAC	5 cut(s)	460, 580, 759, 837, 1832
CspCI	CAANNNNNGTGG	2 cut(s)	1931, 1966
CviQI	GTAC	5 cut(s)	460, 580, 759, 837, 1832
DdeI	CTNAG	9 cut(s)	561, 942, 957, 1004, 1612, 1866, 1871, 1919, 2045
DpnI	GATC	7 cut(s)	71, 523, 553, 1128, 1342, 1617, 1899
DpnII	GATC	7 cut(s)	69, 521, 551, 1126, 1340, 1615, 1897
EaeI	YGGCCR	3 cut(s)	292, 799, 1406
Eam1104I	CTCTTC	3 cut(s)	219, 1641, 1965
EarI	CTCTTC	3 cut(s)	219, 1641, 1965
Ecl136II	GAGCTC	2 cut(s)	1248, 1975
Eco130I	CCWWGG	2 cut(s)	869, 1318
Eco147I	AGGCCT	2 cut(s)	57, 1610
Eco24I	GRGCYC	3 cut(s)	14, 1250, 1977
Eco47I	GGWCC	3 cut(s)	154, 468, 1352
Eco53kI	GAGCTC	2 cut(s)	1248, 1975
Eco57I	CTGAAG	2 cut(s)	801, 1640
Eco88I	CYCGRG	1 cut(s)	1976
EcoICRI	GAGCTC	2 cut(s)	1248, 1975
EcoNI	CCTNNNNNAGG	1 cut(s)	989
EcoO109I	RGGNCCY	2 cut(s)	139, 1790
EcoRII	CCWGG	6 cut(s)	141, 514, 1056, 1117, 1792, 2080
EcoT14I	CCWWGG	2 cut(s)	869, 1318
EcoT22I	ATGCAT	1 cut(s)	636
EcoT38I	GRGCYC	3 cut(s)	14, 1250, 1977
ErhI	CCWWGG	2 cut(s)	869, 1318
FalI	AAGNNNNNCTT	4 cut(s)	23, 55, 408, 440
FaqI	GGGAC	5 cut(s)	64, 481, 517, 653, 1135
FauI	CCCGC	1 cut(s)	105
FauNDI	CATATG	1 cut(s)	821
FbaI	TGATCA	1 cut(s)	1897
FblI	GTMKAC	3 cut(s)	300, 1163, 2050
FriOI	GRGCYC	3 cut(s)	14, 1250, 1977
FspBI	CTAG	4 cut(s)	474, 986, 1598, 1755
GlaI	GCGC	2 cut(s)	101, 260
GsaI	CCCAGC	1 cut(s)	1258
GsuI	CTGGAG	2 cut(s)	145, 776
HaeIII	GGCC	8 cut(s)	57, 141, 294, 801, 1408, 1543, 1610, 1791
HapII	CCGG	7 cut(s)	103, 282, 295, 324, 1173, 1436, 1539
HgaI	GACGC	2 cut(s)	248, 1005
HhaI	GCGC	2 cut(s)	102, 261
Hin6I	GCGC	2 cut(s)	100, 259
HinP1I	GCGC	2 cut(s)	100, 259
HincII	GTYRAC	2 cut(s)	1697, 2051
HindII	GTYRAC	2 cut(s)	1697, 2051
HindIII	AAGCTT	2 cut(s)	422, 1927
HpaII	CCGG	7 cut(s)	103, 282, 295, 324, 1173, 1436, 1539
HphI	GGTGA	1 cut(s)	1731
Hpy166II	GTNNAC	9 cut(s)	301, 582, 1144, 1164, 1391, 1527, 1697, 1832, 2051
Hpy188I	TCNGA	9 cut(s)	185, 1021, 1157, 1293, 1340, 1620, 1716, 1902, 1936
Hpy8I	GTNNAC	9 cut(s)	301, 582, 1144, 1164, 1391, 1527, 1697, 1832, 2051
Hpy99I	CGWCG	1 cut(s)	65
HpyCH4III	ACNGT	4 cut(s)	841, 1204, 1219, 1694
HpyF10VI	GCNNNNNNNGC	6 cut(s)	63, 72, 91, 368, 1781, 1867
HpyF3I	CTNAG	9 cut(s)	561, 942, 957, 1004, 1612, 1866, 1871, 1919, 2045
HspAI	GCGC	2 cut(s)	100, 259
Kpn2I	TCCGGA	1 cut(s)	323
KroI	GCCGGC	1 cut(s)	1172
KroNI	GCCGGC	1 cut(s)	1174
Ksp22I	TGATCA	1 cut(s)	1897
Kzo9I	GATC	7 cut(s)	69, 521, 551, 1126, 1340, 1615, 1897
LguI	GCTCTTC	2 cut(s)	219, 1965
LmnI	GCTCC	9 cut(s)	164, 781, 873, 1245, 1253, 1259, 1499, 1893, 1960
Lsp1109I	GCAGC	8 cut(s)	601, 883, 1042, 1124, 1503, 1614, 1682, 1771
LweI	GCATC	7 cut(s)	39, 713, 955, 1042, 1511, 1720, 1771
MaeI	CTAG	4 cut(s)	474, 986, 1598, 1755
MaeIII	GTNAC	4 cut(s)	594, 1042, 1570, 1737
MalI	GATC	7 cut(s)	71, 523, 553, 1128, 1342, 1617, 1899
MbiI	CCGCTC	2 cut(s)	159, 2062
MboI	GATC	7 cut(s)	69, 521, 551, 1126, 1340, 1615, 1897
MboII	GAAGA	8 cut(s)	206, 394, 1002, 1074, 1633, 1658, 1773, 1982
MflI	RGATCY	5 cut(s)	521, 551, 1126, 1340, 1615
MhlI	GDGCHC	7 cut(s)	14, 214, 1202, 1214, 1250, 1890, 1977
MlsI	TGGCCA	2 cut(s)	801, 1408
MluCI	AATT	9 cut(s)	172, 545, 627, 1231, 1334, 1361, 1449, 1854, 2040
MluNI	TGGCCA	2 cut(s)	801, 1408
MlyI	GAGTC	4 cut(s)	86, 572, 1586, 1753
MmeI	TCCRAC	3 cut(s)	387, 811, 1330
Mox20I	TGGCCA	2 cut(s)	801, 1408
Mph1103I	ATGCAT	1 cut(s)	636
MroI	TCCGGA	1 cut(s)	323
MroNI	GCCGGC	1 cut(s)	1172
MroXI	GAANNNNTTC	3 cut(s)	612, 786, 1650
MscI	TGGCCA	2 cut(s)	801, 1408
MseI	TTAA	7 cut(s)	41, 429, 684, 977, 1131, 1364, 1452
MslI	CAYNNNNRTG	3 cut(s)	308, 621, 662
Msp20I	TGGCCA	2 cut(s)	801, 1408
MspA1I	CMGCKG	2 cut(s)	592, 1673
MspCI	CTTAAG	2 cut(s)	428, 1130
MspI	CCGG	7 cut(s)	103, 282, 295, 324, 1173, 1436, 1539
MspR9I	CCNGG	9 cut(s)	104, 143, 296, 516, 1058, 1119, 1540, 1794, 2082
Mva1269I	GAATGC	1 cut(s)	1672
MvaI	CCWGG	6 cut(s)	143, 516, 1058, 1119, 1794, 2082
MvnI	CGCG	3 cut(s)	75, 100, 178
MwoI	GCNNNNNNNGC	6 cut(s)	63, 72, 91, 368, 1781, 1867
NaeI	GCCGGC	1 cut(s)	1174
NciI	CCSGG	3 cut(s)	104, 296, 1540
NcoI	CCATGG	1 cut(s)	869
NdeI	CATATG	1 cut(s)	821
NdeII	GATC	7 cut(s)	69, 521, 551, 1126, 1340, 1615, 1897
NgoMIV	GCCGGC	1 cut(s)	1172
NmuCI	GTSAC	2 cut(s)	1042, 1737
NruI	TCGCGA	1 cut(s)	178
NsiI	ATGCAT	1 cut(s)	636
NspI	RCATGY	2 cut(s)	1288, 1703
NspV	TTCGAA	1 cut(s)	374
PaeR7I	CTCGAG	1 cut(s)	1976
PagI	TCATGA	1 cut(s)	1894
PasI	CCCWGGG	1 cut(s)	1793
PceI	AGGCCT	2 cut(s)	57, 1610
PciI	ACATGT	2 cut(s)	1284, 1699
PciSI	GCTCTTC	2 cut(s)	219, 1965
PcsI	WCGNNNNNNNCGW	1 cut(s)	227
PctI	GAATGC	1 cut(s)	1672
PdiI	GCCGGC	1 cut(s)	1174
PdmI	GAANNNNTTC	3 cut(s)	612, 786, 1650
PfeI	GAWTC	7 cut(s)	180, 250, 320, 433, 485, 1764, 1907
PflFI	GACNNNGTC	1 cut(s)	1313
PfoI	TCCNGGA	1 cut(s)	2080
PleI	GAGTC	4 cut(s)	85, 571, 1585, 1752
PpsI	GAGTC	4 cut(s)	85, 571, 1585, 1752
PscI	ACATGT	2 cut(s)	1284, 1699
PshAI	GACNNNNGTC	1 cut(s)	1287
PsiI	TTATAA	1 cut(s)	572
Psp124BI	GAGCTC	2 cut(s)	1250, 1977
Psp6I	CCWGG	6 cut(s)	141, 514, 1056, 1117, 1792, 2080
PspFI	CCCAGC	1 cut(s)	1254
PspGI	CCWGG	6 cut(s)	141, 514, 1056, 1117, 1792, 2080
PspPI	GGNCC	6 cut(s)	139, 154, 468, 1352, 1541, 1790
PstI	CTGCAG	1 cut(s)	1789
PstNI	CAGNNNCTG	2 cut(s)	1118, 1793
PsuI	RGATCY	5 cut(s)	521, 551, 1126, 1340, 1615
PsyI	GACNNNGTC	1 cut(s)	1313
PvuII	CAGCTG	2 cut(s)	592, 1673
RruI	TCGCGA	1 cut(s)	178
RsaI	GTAC	5 cut(s)	461, 581, 760, 838, 1833
RsaNI	GTAC	5 cut(s)	460, 580, 759, 837, 1832
RseI	CAYNNNNRTG	3 cut(s)	308, 621, 662
SacI	GAGCTC	2 cut(s)	1250, 1977
SalI	GTCGAC	1 cut(s)	2049
SapI	GCTCTTC	2 cut(s)	219, 1965
SaqAI	TTAA	7 cut(s)	41, 429, 684, 977, 1131, 1364, 1452
Sau3AI	GATC	7 cut(s)	69, 521, 551, 1126, 1340, 1615, 1897
Sau96I	GGNCC	6 cut(s)	139, 154, 468, 1352, 1541, 1790
SchI	GAGTC	4 cut(s)	86, 572, 1586, 1753
ScrFI	CCNGG	9 cut(s)	104, 143, 296, 516, 1058, 1119, 1540, 1794, 2082
SduI	GDGCHC	7 cut(s)	14, 214, 1202, 1214, 1250, 1890, 1977
SfaNI	GCATC	7 cut(s)	39, 713, 955, 1042, 1511, 1720, 1771
SfcI	CTRYAG	2 cut(s)	855, 1785
Sfr274I	CTCGAG	1 cut(s)	1976
SfuI	TTCGAA	1 cut(s)	374
SinI	GGWCC	3 cut(s)	154, 468, 1352
SlaI	CTCGAG	1 cut(s)	1976
SmiMI	CAYNNNNRTG	3 cut(s)	308, 621, 662
SmlI	CTYRAG	3 cut(s)	428, 1130, 1976
SmoI	CTYRAG	3 cut(s)	428, 1130, 1976
Sse9I	AATT	9 cut(s)	172, 545, 627, 1231, 1334, 1361, 1449, 1854, 2040
SseBI	AGGCCT	2 cut(s)	57, 1610
SsiI	CCGC	8 cut(s)	73, 86, 98, 157, 245, 359, 471, 2062
SspI	AATATT	1 cut(s)	496
SspMI	CTAG	4 cut(s)	474, 986, 1598, 1755
SstI	GAGCTC	2 cut(s)	1250, 1977
StuI	AGGCCT	2 cut(s)	57, 1610
StyD4I	CCNGG	9 cut(s)	102, 141, 294, 514, 1056, 1117, 1538, 1792, 2080
StyI	CCWWGG	2 cut(s)	869, 1318
TaaI	ACNGT	4 cut(s)	841, 1204, 1219, 1694
TaqI	TCGA	7 cut(s)	230, 318, 374, 400, 1225, 1977, 2050
TaqII	GACCGA	2 cut(s)	36, 1854
TasI	AATT	9 cut(s)	172, 545, 627, 1231, 1334, 1361, 1449, 1854, 2040
TatI	WGTACW	3 cut(s)	579, 836, 1831
TauI	GCSGC	3 cut(s)	88, 362, 2065
TfiI	GAWTC	7 cut(s)	180, 250, 320, 433, 485, 1764, 1907
Tru1I	TTAA	7 cut(s)	41, 429, 684, 977, 1131, 1364, 1452
Tru9I	TTAA	7 cut(s)	41, 429, 684, 977, 1131, 1364, 1452
TscAI	CASTG	3 cut(s)	1051, 1207, 1831
TseFI	GTSAC	2 cut(s)	1042, 1737
TseI	GCWGC	8 cut(s)	589, 896, 1030, 1112, 1491, 1627, 1670, 1784
Tsp45I	GTSAC	2 cut(s)	1042, 1737
TspGWI	ACGGA	3 cut(s)	126, 158, 2083
TspRI	CASTG	3 cut(s)	1051, 1207, 1831
Tth111I	GACNNNGTC	1 cut(s)	1313
Vha464I	CTTAAG	2 cut(s)	428, 1130
VpaK11BI	GGWCC	3 cut(s)	154, 468, 1352
XagI	CCTNNNNNAGG	1 cut(s)	989
XapI	RAATTY	5 cut(s)	545, 1231, 1334, 1854, 2040
XceI	RCATGY	2 cut(s)	1288, 1703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1401
XhoI	CTCGAG	1 cut(s)	1976
XmiI	GTMKAC	3 cut(s)	300, 1163, 2050
XmnI	GAANNNNTTC	3 cut(s)	612, 786, 1650
XspI	CTAG	4 cut(s)	474, 986, 1598, 1755
Zsp2I	ATGCAT	1 cut(s)	636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.