Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0006451

Physical Location & Seq

Genomic Coordinates Forward (+)

22989130 .. 22993523

Gene Structure 4394 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007924

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGCAAGGCCTCGTCGGCTTGGTCCGCGAGTCCCTTGACTTCCGGACCAGCGGACTCGTCGACAAGATCGGCTCCAGCATTAGAAAATCGCGAATCGGGCTTTTCGCTAGGCCTCCGGCGCCGCGTGCGCTTCCTCCGGTGGTCCCCGATGACGACGCGCCGCCGATTCGGTGGCGCAAGGGCGAGTTGATTGGGTCTGGTGCCTTCGGGCGGGTCTATATGGGGATGAATCTCGATTCCGGAGAGCTTATTGCCGTGAAACAGGTTTCGATTGCCGCAAGTAGTGCTTCAAAGGAGAAGACACAGGCTCATATTCGAGAGTTGGAGGAGGAAGTGAGGCTTCTTAAGAATCTTTCACACCCAAACATTGTTAGGTACTTGGGGACTGCTAGAGAAGCCGATTCATTGAATATTCTGTTGGAATTTGTGCCAGGCGGATCCATATCCTCACTCTTGGGGAAATTTGGGTCCTTTCCTGAGTCTGTTATTAGAATGTACACGAAGCAACTGTTATTGGGCCTCGAATACCTACACAAGAATGGAATTATGCATAGGGACATCAAGGCCACTATAAATGGTGCCAAGTCAATGAAGGGAACTCCGTATTGGATGGCTCCGGAAGTTATTCTCCAGACTGGTCATAGTTTCTCTGCTGACATATGGAGTGTTGGATGTACTGTGATTGAGATGGCTACCGGAAAGCCTCCATGGAGCCAACAGTATCAGGAGGTTGCTGCTCTCTTCCATATTGGAACAACAAAATCTCATCCACCCATTCCTGAGCATCTCTCTGTTGAGGCAAAGGATTTTCTATTAAAATGTCTAGAGAAGGAACCTGACTTCAGGTCTGCTGCGTCAGAACTGCTGCAGCACCCATTTGTCACTGGGGATTATCAGGAACCTCGCTCAGCATTACGCACTTCAGTTGTGGAAGCTGGAAATCATATGGCAACACCTGGGACCAATCTTAAGAACTCCATGAACGTTTCGATCAGAAGGTCAACCTGCGCAGGCTTGAAGGATATTTGCGACATGGGTAGTGTAAGGTGCTCAACTGTATACCCCAACAATATTTCAGGAGGGAGCTCCTGCTGGGGAGCAAATAATACTGATGATGACATGTGTCAGCTTGATGATTCTGATGATATAATGCTTGGTTCGTTTGTAAAATTTAATTCTGTGATGGCATCAGGTGGATTAAACAAGAGTTTCAATCCCATGTGTGAACCAACTGATGACTGGCAATGTAAGTTCGATGAAAGTCTGGAGTTGAGAAAAAGTGGAATGAACTTGCCCCCTTGTCTAACAATACATGAGGCTTCAAGCAGCGCTGAAGCGTCTCATAAGGTGGAGAATGAATTCACATTTCCTTGTGGTCCATCAGTGGCTGAGGATGATGAGGAAGTCACAGAAACGAAAATAAGAGCCTTCCTAGATGAAAAGGCATTAGATCTGAAGAAGCTGCAGACACCGTTATTTGAAGAATTTTTTAGTACTTTGAATGCAGCTGGTCCCCCAGGTGCAATTGGAAATGCAAATAGTGATTGTGTTTCAAATAATCTGCATTTACCTCCTAAAAGCAAGTCACCCAGTCGGGCACCTAGTAGAAGATTCTCTGCAATAGTTGGAACTGTCAATGGTTCGCGCTTCGGGAAACACACCCTAAATGTATCAAATGCAAGTGGTGTGCATAGTCATATCTTACAGGAAATTCAGCCGCCTCAGCTTAGTGAACGGAAAGGGCCTCTTGATTCTCAGAAAGATTCACTCAGTGCAAGTGCAAGTTTTTCCGAGTTGCAAAGGAGGTGGAAAGAGGAGCTTGACGAAGAGTTAGAGAGGAAGCGAGAGATGAAACGCAAGGCTGGTTTAGGGATGAATACATCACCATCGCCAAACAACCAGATTATTAGTCGACAAAGAGAGCAGCAATGGGGTGTTTTCTCCACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

651

Amino Acids

71.33

Weight (kDa)

6.49

Isoelectric Point (pI)

49.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	59 - 189	2e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	61 - 189	6.6e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	194 - 294	2.2e-23	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	197 - 290	4.5e-11	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06030
fragaria_vesca	FvH4_4g14910 FvH4_4g14910
malus_domestica	MD13G1186500.v1.1 MD16G1187200.v1.1
prunus_persica	Prupe.1G154200_v2.0.a1 Prupe.1G154200_v2.0.a1
pyrus_communis	pycom13g16140 pycom16g15720
rosa_chinensis	RchiOBHm_Chr4g0417171
rosa_laevigata	RLG00000007924
rosa_multiflora	Rmu_co8320689.1_g000001 Rmu_sc0000959.1_g000002 Rmu_sc0001643.1_g000003
rosa_roxburghii	Rroxscaffold_3G00245000 Rroxscaffold_5G00361000
rosa_rugosa	Rorug02G0282700 Rorug04G0146200
rosa_samantha	Rh2AG335100 Rh4AG209200 Rh4BG206100 Rh4BG206300 Rh4CG220200 Rh4DG206900 Rh5AG248600
rosa_wichuraiana	Rw4G017720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1009
Acc36I	ACCTGC	1 cut(s)	1013
AccB1I	GGYRCC	4 cut(s)	118, 200, 578, 1597
AccI	GTMKAC	3 cut(s)	60, 1059, 1912
AccII	CGCG	5 cut(s)	27, 91, 124, 158, 1645
AccIII	TCCGGA	3 cut(s)	42, 239, 616
AciI	CCGC	8 cut(s)	25, 51, 122, 161, 211, 276, 435, 1718
AclI	AACGTT	1 cut(s)	984
AclWI	GGATC	2 cut(s)	432, 445
AcsI	RAATTY	6 cut(s)	422, 461, 1169, 1358, 1484, 1710
AcuI	CTGAAG	4 cut(s)	826, 906, 1353, 1475
AcyI	GRCGYC	1 cut(s)	119
AdeI	CACNNNGTG	1 cut(s)	1772
AfaI	GTAC	4 cut(s)	377, 497, 676, 1495
AfeI	AGCGCT	1 cut(s)	1330
AfiI	CCNNNNNNNGG	1 cut(s)	210
AflII	CTTAAG	2 cut(s)	344, 968
AflIII	ACRYGT	1 cut(s)	1119
AgsI	TTSAA	8 cut(s)	291, 409, 1018, 1213, 1323, 1481, 1501, 1554
AhdI	GACNNNNNGTC	1 cut(s)	844
AjnI	CCWGG	3 cut(s)	430, 955, 1516
AjuI	GAANNNNNNNTTGG	4 cut(s)	401, 433, 589, 621
AluBI	AGCT	8 cut(s)	247, 935, 1086, 1129, 1462, 1508, 1726, 1819
AluI	AGCT	8 cut(s)	247, 935, 1086, 1129, 1462, 1508, 1726, 1819
Alw21I	GWGCWC	2 cut(s)	1052, 1088
Alw26I	GTCTC	1 cut(s)	1344
AlwI	GGATC	2 cut(s)	432, 445
AlwNI	CAGNNNCTG	1 cut(s)	1388
Aor13HI	TCCGGA	3 cut(s)	42, 239, 616
Aor51HI	AGCGCT	1 cut(s)	1330
AoxI	GGCC	5 cut(s)	7, 110, 517, 564, 1742
ApeKI	GCWGC	8 cut(s)	734, 851, 865, 868, 1326, 1462, 1505, 1924
ApoI	RAATTY	6 cut(s)	422, 461, 1169, 1358, 1484, 1710
Asp700I	GAANNNNTTC	2 cut(s)	624, 1358
AspLEI	GCGC	7 cut(s)	121, 130, 160, 177, 1010, 1331, 1647
AspS9I	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 960, 1376, 1511, 1742
AsuHPI	GGTGA	2 cut(s)	1578, 1875
AvaII	GGWCC	7 cut(s)	22, 45, 142, 468, 960, 1376, 1511
BaeGI	GKGCMC	1 cut(s)	1600
BamHI	GGATCC	1 cut(s)	437
BanI	GGYRCC	4 cut(s)	118, 200, 578, 1597
BanII	GRGCYC	1 cut(s)	1088
BbsI	GAAGAC	1 cut(s)	305
Bbv12I	GWGCWC	2 cut(s)	1052, 1088
BbvCI	CCTCAGC	2 cut(s)	1389, 1722
BbvI	GCAGC	8 cut(s)	721, 838, 852, 880, 1338, 1449, 1517, 1936
BccI	CCATC	5 cut(s)	604, 682, 1177, 1387, 1894
BceAI	ACGGC	1 cut(s)	239
BciT130I	CCWGG	3 cut(s)	432, 957, 1518
BcoDI	GTCTC	1 cut(s)	1344
BfaI	CTAG	5 cut(s)	108, 390, 824, 1433, 1602
BfmI	CTRYAG	2 cut(s)	866, 1463
BfoI	RGCGCY	2 cut(s)	122, 1332
BfrI	CTTAAG	2 cut(s)	344, 968
BfuAI	ACCTGC	1 cut(s)	1013
BglI	GCCNNNNNGGC	1 cut(s)	15
BglII	AGATCT	1 cut(s)	1450
BlpI	GCTNAGC	1 cut(s)	907
BmcAI	AGTACT	1 cut(s)	1495
Bme1390I	CCNGG	3 cut(s)	432, 957, 1518
Bme18I	GGWCC	7 cut(s)	22, 45, 142, 468, 960, 1376, 1511
BmeRI	GACNNNNNGTC	1 cut(s)	844
BmgT120I	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 960, 1376, 1511, 1742
BmrFI	CCNGG	3 cut(s)	432, 957, 1518
BmrI	ACTGGG	2 cut(s)	894, 1584
BmsI	GCATC	2 cut(s)	793, 1196
BmuI	ACTGGG	2 cut(s)	894, 1584
BoxI	GACNNNNGTC	1 cut(s)	1122
BpiI	GAAGAC	1 cut(s)	305
BplI	GAGNNNNNCTC	2 cut(s)	773, 805
BpmI	CTGGAG	3 cut(s)	58, 614, 1286
Bpu10I	CCTNAGC	3 cut(s)	780, 1389, 1722
Bpu1102I	GCTNAGC	1 cut(s)	907
BsaBI	GATNNNNATC	1 cut(s)	442
BsaHI	GRCGYC	1 cut(s)	119
BsaJI	CCNNGG	3 cut(s)	707, 956, 1516
BsaWI	WCCGGW	5 cut(s)	42, 136, 239, 616, 695
Bsc4I	CCNNNNNNNGG	1 cut(s)	210
Bse1I	ACTGG	4 cut(s)	640, 889, 1244, 1590
Bse3DI	GCAATG	2 cut(s)	1250, 1934
Bse8I	GATNNNNATC	1 cut(s)	442
BseAI	TCCGGA	3 cut(s)	42, 239, 616
BseBI	CCWGG	3 cut(s)	432, 957, 1518
BseDI	CCNNGG	3 cut(s)	707, 956, 1516
BseGI	GGATG	6 cut(s)	231, 615, 677, 766, 1399, 1878
BseJI	GATNNNNATC	1 cut(s)	442
BseLI	CCNNNNNNNGG	1 cut(s)	210
BseMI	GCAATG	2 cut(s)	1250, 1934
BseMII	CTCAG	7 cut(s)	468, 771, 921, 1380, 1736, 1769, 1783
BseNI	ACTGG	4 cut(s)	640, 889, 1244, 1590
BseRI	GAGGAG	2 cut(s)	341, 1829
BseSI	GKGCMC	1 cut(s)	1600
BseXI	GCAGC	8 cut(s)	721, 838, 852, 880, 1338, 1449, 1517, 1936
BseYI	CCCAGC	1 cut(s)	1092
Bsh1236I	CGCG	5 cut(s)	27, 91, 124, 158, 1645
BshFI	GGCC	5 cut(s)	9, 112, 519, 566, 1744
BshNI	GGYRCC	4 cut(s)	118, 200, 578, 1597
BsiHKAI	GWGCWC	2 cut(s)	1052, 1088
BsiSI	CCGG	6 cut(s)	43, 116, 137, 240, 617, 696
BslFI	GGGAC	6 cut(s)	16, 128, 397, 569, 973, 1497
BslI	CCNNNNNNNGG	1 cut(s)	210
BsmAI	GTCTC	1 cut(s)	1344
BsmBI	CGTCTC	1 cut(s)	1344
BsmFI	GGGAC	6 cut(s)	16, 128, 397, 569, 973, 1497
BsmI	GAATGC	1 cut(s)	1507
BsnI	GGCC	5 cut(s)	9, 112, 519, 566, 1744
Bsp1286I	GDGCHC	3 cut(s)	1052, 1088, 1600
Bsp13I	TCCGGA	3 cut(s)	42, 239, 616
Bsp1407I	TGTACA	1 cut(s)	495
Bsp143I	GATC	4 cut(s)	66, 437, 990, 1450
Bsp1720I	GCTNAGC	1 cut(s)	907
Bsp19I	CCATGG	1 cut(s)	707
Bsp68I	TCGCGA	1 cut(s)	91
BspACI	CCGC	8 cut(s)	25, 51, 122, 161, 211, 276, 435, 1718
BspANI	GGCC	5 cut(s)	9, 112, 519, 566, 1744
BspCNI	CTCAG	7 cut(s)	469, 772, 920, 1381, 1735, 1768, 1782
BspEI	TCCGGA	3 cut(s)	42, 239, 616
BspFNI	CGCG	5 cut(s)	27, 91, 124, 158, 1645
BspMAI	CTGCAG	2 cut(s)	870, 1467
BspMI	ACCTGC	1 cut(s)	1013
BspPI	GGATC	2 cut(s)	432, 445
BspT107I	GGYRCC	4 cut(s)	118, 200, 578, 1597
BspTI	CTTAAG	2 cut(s)	344, 968
BsrDI	GCAATG	2 cut(s)	1250, 1934
BsrGI	TGTACA	1 cut(s)	495
BsrI	ACTGG	4 cut(s)	640, 889, 1244, 1590
BssECI	CCNNGG	3 cut(s)	707, 956, 1516
BssMI	GATC	4 cut(s)	66, 437, 990, 1450
BssNAI	GTATAC	1 cut(s)	1060
BssNI	GRCGYC	1 cut(s)	119
BssT1I	CCWWGG	1 cut(s)	707
Bst1107I	GTATAC	1 cut(s)	1060
Bst2UI	CCWGG	3 cut(s)	432, 957, 1518
Bst4CI	ACNGT	6 cut(s)	510, 679, 720, 1057, 1473, 1633
Bst6I	CTCTTC	2 cut(s)	746, 1821
BstACI	GRCGYC	1 cut(s)	119
BstAFI	CTTAAG	2 cut(s)	344, 968
BstAPI	GCANNNNNTGC	1 cut(s)	284
BstAUI	TGTACA	1 cut(s)	495
BstC8I	GCNNGC	2 cut(s)	126, 1012
BstDEI	CTNAG	8 cut(s)	477, 780, 907, 1389, 1722, 1727, 1755, 1769
BstDSI	CCRYGG	1 cut(s)	707
BstF5I	GGATG	6 cut(s)	231, 615, 677, 766, 1399, 1878
BstFNI	CGCG	5 cut(s)	27, 91, 124, 158, 1645
BstH2I	RGCGCY	2 cut(s)	122, 1332
BstHHI	GCGC	7 cut(s)	121, 130, 160, 177, 1010, 1331, 1647
BstKTI	GATC	4 cut(s)	69, 440, 993, 1453
BstMAI	GTCTC	1 cut(s)	1344
BstMBI	GATC	4 cut(s)	66, 437, 990, 1450
BstMWI	GCNNNNNNNGC	9 cut(s)	15, 24, 97, 118, 125, 127, 284, 395, 1723
BstNI	CCWGG	3 cut(s)	432, 957, 1518
BstNSI	RCATGY	1 cut(s)	1123
BstPAI	GACNNNNGTC	1 cut(s)	1122
BstSCI	CCNGG	3 cut(s)	430, 955, 1516
BstSFI	CTRYAG	2 cut(s)	866, 1463
BstSLI	GKGCMC	1 cut(s)	1600
BstUI	CGCG	5 cut(s)	27, 91, 124, 158, 1645
BstV1I	GCAGC	8 cut(s)	721, 838, 852, 880, 1338, 1449, 1517, 1936
BstV2I	GAAGAC	1 cut(s)	305
BstX2I	RGATCY	2 cut(s)	437, 1450
BstYI	RGATCY	2 cut(s)	437, 1450
BstZ17I	GTATAC	1 cut(s)	1060
BsuRI	GGCC	5 cut(s)	9, 112, 519, 566, 1744
BtgI	CCRYGG	1 cut(s)	707
BtgZI	GCGATG	1 cut(s)	1872
BtsCI	GGATG	6 cut(s)	231, 615, 677, 766, 1399, 1878
BtsIMutI	CAGTG	3 cut(s)	882, 1389, 1777
BtuMI	TCGCGA	1 cut(s)	91
BveI	ACCTGC	1 cut(s)	1013
Cac8I	GCNNGC	2 cut(s)	126, 1012
CaiI	CAGNNNCTG	1 cut(s)	1388
CfoI	GCGC	7 cut(s)	121, 130, 160, 177, 1010, 1331, 1647
Cfr13I	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 960, 1376, 1511, 1742
CseI	GACGC	3 cut(s)	164, 843, 1326
Csp6I	GTAC	4 cut(s)	376, 496, 675, 1494
CspCI	CAANNNNNGTGG	2 cut(s)	1787, 1822
CviAII	CATG	6 cut(s)	708, 979, 1033, 1120, 1219, 1313
CviQI	GTAC	4 cut(s)	376, 496, 675, 1494
DdeI	CTNAG	8 cut(s)	477, 780, 907, 1389, 1722, 1727, 1755, 1769
DinI	GGCGCC	1 cut(s)	120
DpnI	GATC	4 cut(s)	68, 439, 992, 1452
DpnII	GATC	4 cut(s)	66, 437, 990, 1450
DraIII	CACNNNGTG	1 cut(s)	1772
DriI	GACNNNNNGTC	1 cut(s)	844
Eam1104I	CTCTTC	2 cut(s)	746, 1821
Eam1105I	GACNNNNNGTC	1 cut(s)	844
EarI	CTCTTC	2 cut(s)	746, 1821
EciI	GGCGGA	1 cut(s)	450
Ecl136II	GAGCTC	1 cut(s)	1086
Eco130I	CCWWGG	1 cut(s)	707
Eco147I	AGGCCT	2 cut(s)	9, 112
Eco24I	GRGCYC	1 cut(s)	1088
Eco47I	GGWCC	7 cut(s)	22, 45, 142, 468, 960, 1376, 1511
Eco47III	AGCGCT	1 cut(s)	1330
Eco53kI	GAGCTC	1 cut(s)	1086
Eco57I	CTGAAG	4 cut(s)	826, 906, 1353, 1475
EcoICRI	GAGCTC	1 cut(s)	1086
EcoO109I	RGGNCCY	2 cut(s)	468, 1742
EcoRI	GAATTC	1 cut(s)	1358
EcoRII	CCWGG	3 cut(s)	430, 955, 1516
EcoT14I	CCWWGG	1 cut(s)	707
EcoT22I	ATGCAT	1 cut(s)	552
EcoT38I	GRGCYC	1 cut(s)	1088
EgeI	GGCGCC	1 cut(s)	120
EheI	GGCGCC	1 cut(s)	120
ErhI	CCWWGG	1 cut(s)	707
Esp3I	CGTCTC	1 cut(s)	1344
FaeI	CATG	6 cut(s)	711, 982, 1036, 1123, 1222, 1316
FalI	AAGNNNNNCTT	8 cut(s)	271, 303, 324, 356, 1731, 1763, 1803, 1835
FaqI	GGGAC	6 cut(s)	16, 128, 397, 569, 973, 1497
FatI	CATG	6 cut(s)	707, 978, 1032, 1119, 1218, 1312
FauI	CCCGC	1 cut(s)	204
FauNDI	CATATG	2 cut(s)	659, 945
FblI	GTMKAC	3 cut(s)	60, 1059, 1912
FokI	GGATG	6 cut(s)	238, 622, 684, 753, 1406, 1885
FriOI	GRGCYC	1 cut(s)	1088
FspBI	CTAG	5 cut(s)	108, 390, 824, 1433, 1602
FspI	TGCGCA	1 cut(s)	1009
GlaI	GCGC	7 cut(s)	120, 129, 159, 176, 1009, 1330, 1646
GsaI	CCCAGC	1 cut(s)	1096
GsuI	CTGGAG	3 cut(s)	58, 614, 1286
HaeII	RGCGCY	2 cut(s)	122, 1332
HaeIII	GGCC	5 cut(s)	9, 112, 519, 566, 1744
HapII	CCGG	6 cut(s)	43, 116, 137, 240, 617, 696
HgaI	GACGC	3 cut(s)	164, 843, 1326
HhaI	GCGC	7 cut(s)	121, 130, 160, 177, 1010, 1331, 1647
Hin1I	GRCGYC	1 cut(s)	119
Hin1II	CATG	6 cut(s)	711, 982, 1036, 1123, 1222, 1316
Hin6I	GCGC	7 cut(s)	119, 128, 158, 175, 1008, 1329, 1645
HinP1I	GCGC	7 cut(s)	119, 128, 158, 175, 1008, 1329, 1645
HincII	GTYRAC	3 cut(s)	61, 1002, 1913
HindII	GTYRAC	3 cut(s)	61, 1002, 1913
HpaII	CCGG	6 cut(s)	43, 116, 137, 240, 617, 696
HphI	GGTGA	2 cut(s)	1578, 1875
Hpy166II	GTNNAC	7 cut(s)	61, 498, 1002, 1060, 1226, 1733, 1913
Hpy188I	TCNGA	6 cut(s)	859, 995, 1141, 1455, 1758, 1792
Hpy8I	GTNNAC	7 cut(s)	61, 498, 1002, 1060, 1226, 1733, 1913
Hpy99I	CGWCG	3 cut(s)	17, 62, 158
HpyAV	CCTTC	6 cut(s)	214, 586, 823, 990, 1012, 1438
HpyCH4III	ACNGT	6 cut(s)	510, 679, 720, 1057, 1473, 1633
HpyCH4IV	ACGT	1 cut(s)	984
HpyF10VI	GCNNNNNNNGC	9 cut(s)	15, 24, 97, 118, 125, 127, 284, 395, 1723
HpyF3I	CTNAG	8 cut(s)	477, 780, 907, 1389, 1722, 1727, 1755, 1769
HpySE526I	ACGT	1 cut(s)	984
Hsp92I	GRCGYC	1 cut(s)	119
Hsp92II	CATG	6 cut(s)	711, 982, 1036, 1123, 1222, 1316
HspAI	GCGC	7 cut(s)	119, 128, 158, 175, 1008, 1329, 1645
KasI	GGCGCC	1 cut(s)	118
Kpn2I	TCCGGA	3 cut(s)	42, 239, 616
Kzo9I	GATC	4 cut(s)	66, 437, 990, 1450
LmnI	GCTCC	7 cut(s)	77, 619, 711, 1083, 1091, 1097, 1816
Lsp1109I	GCAGC	8 cut(s)	721, 838, 852, 880, 1338, 1449, 1517, 1936
LweI	GCATC	2 cut(s)	793, 1196
MaeI	CTAG	5 cut(s)	108, 390, 824, 1433, 1602
MaeII	ACGT	1 cut(s)	984
MaeIII	GTNAC	3 cut(s)	880, 1405, 1584
MalI	GATC	4 cut(s)	68, 439, 992, 1452
MboI	GATC	4 cut(s)	66, 437, 990, 1450
MboII	GAAGA	6 cut(s)	310, 733, 1468, 1493, 1620, 1838
MfeI	CAATTG	1 cut(s)	1524
MflI	RGATCY	2 cut(s)	437, 1450
MhlI	GDGCHC	3 cut(s)	1052, 1088, 1600
MluCI	AATT	9 cut(s)	422, 461, 543, 1169, 1174, 1358, 1484, 1524, 1710
Mly113I	GGCGCC	1 cut(s)	119
MlyI	GAGTC	3 cut(s)	38, 48, 488
MmeI	TCCRAC	4 cut(s)	303, 399, 649, 1606
Mph1103I	ATGCAT	1 cut(s)	552
MroI	TCCGGA	3 cut(s)	42, 239, 616
MroXI	GAANNNNTTC	2 cut(s)	624, 1358
MseI	TTAA	5 cut(s)	345, 815, 969, 1173, 1199
MslI	CAYNNNNRTG	1 cut(s)	537
MspA1I	CMGCKG	2 cut(s)	51, 1508
MspCI	CTTAAG	2 cut(s)	344, 968
MspI	CCGG	6 cut(s)	43, 116, 137, 240, 617, 696
MspR9I	CCNGG	3 cut(s)	432, 957, 1518
MunI	CAATTG	1 cut(s)	1524
Mva1269I	GAATGC	1 cut(s)	1507
MvaI	CCWGG	3 cut(s)	432, 957, 1518
MvnI	CGCG	5 cut(s)	27, 91, 124, 158, 1645
MwoI	GCNNNNNNNGC	9 cut(s)	15, 24, 97, 118, 125, 127, 284, 395, 1723
NarI	GGCGCC	1 cut(s)	119
NcoI	CCATGG	1 cut(s)	707
NdeI	CATATG	2 cut(s)	659, 945
NdeII	GATC	4 cut(s)	66, 437, 990, 1450
NlaIII	CATG	6 cut(s)	711, 982, 1036, 1123, 1222, 1316
NmuCI	GTSAC	3 cut(s)	880, 1405, 1584
NruI	TCGCGA	1 cut(s)	91
NsbI	TGCGCA	1 cut(s)	1009
NsiI	ATGCAT	1 cut(s)	552
NspI	RCATGY	1 cut(s)	1123
PceI	AGGCCT	2 cut(s)	9, 112
PciI	ACATGT	1 cut(s)	1119
PctI	GAATGC	1 cut(s)	1507
PdmI	GAANNNNTTC	2 cut(s)	624, 1358
PleI	GAGTC	3 cut(s)	37, 48, 487
PluTI	GGCGCC	1 cut(s)	122
PpsI	GAGTC	3 cut(s)	37, 48, 487
PpuMI	RGGWCCY	1 cut(s)	468
PscI	ACATGT	1 cut(s)	1119
PshAI	GACNNNNGTC	1 cut(s)	1122
Psp124BI	GAGCTC	1 cut(s)	1088
Psp1406I	AACGTT	1 cut(s)	984
Psp5II	RGGWCCY	1 cut(s)	468
Psp6I	CCWGG	3 cut(s)	430, 955, 1516
PspFI	CCCAGC	1 cut(s)	1092
PspGI	CCWGG	3 cut(s)	430, 955, 1516
PspPI	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 960, 1376, 1511, 1742
PspPPI	RGGWCCY	1 cut(s)	468
PstI	CTGCAG	2 cut(s)	870, 1467
PstNI	CAGNNNCTG	1 cut(s)	1388
PsuI	RGATCY	2 cut(s)	437, 1450
PvuII	CAGCTG	1 cut(s)	1508
RruI	TCGCGA	1 cut(s)	91
RsaI	GTAC	4 cut(s)	377, 497, 676, 1495
RsaNI	GTAC	4 cut(s)	376, 496, 675, 1494
RseI	CAYNNNNRTG	1 cut(s)	537
SacI	GAGCTC	1 cut(s)	1088
SalI	GTCGAC	2 cut(s)	59, 1911
SaqAI	TTAA	5 cut(s)	345, 815, 969, 1173, 1199
Sau3AI	GATC	4 cut(s)	66, 437, 990, 1450
Sau96I	GGNCC	9 cut(s)	22, 45, 142, 468, 517, 960, 1376, 1511, 1742
ScaI	AGTACT	1 cut(s)	1495
SchI	GAGTC	3 cut(s)	38, 48, 488
ScrFI	CCNGG	3 cut(s)	432, 957, 1518
SduI	GDGCHC	3 cut(s)	1052, 1088, 1600
SfaNI	GCATC	2 cut(s)	793, 1196
SfcI	CTRYAG	2 cut(s)	866, 1463
SfoI	GGCGCC	1 cut(s)	120
SinI	GGWCC	7 cut(s)	22, 45, 142, 468, 960, 1376, 1511
SmiMI	CAYNNNNRTG	1 cut(s)	537
SmlI	CTYRAG	2 cut(s)	344, 968
SmoI	CTYRAG	2 cut(s)	344, 968
Sse9I	AATT	9 cut(s)	422, 461, 543, 1169, 1174, 1358, 1484, 1524, 1710
SseBI	AGGCCT	2 cut(s)	9, 112
SsiI	CCGC	8 cut(s)	25, 51, 122, 161, 211, 276, 435, 1718
SspDI	GGCGCC	1 cut(s)	118
SspI	AATATT	2 cut(s)	412, 1072
SspMI	CTAG	5 cut(s)	108, 390, 824, 1433, 1602
SstI	GAGCTC	1 cut(s)	1088
StuI	AGGCCT	2 cut(s)	9, 112
StyD4I	CCNGG	3 cut(s)	430, 955, 1516
StyI	CCWWGG	1 cut(s)	707
TaaI	ACNGT	6 cut(s)	510, 679, 720, 1057, 1473, 1633
TaiI	ACGT	1 cut(s)	987
TaqI	TCGA	8 cut(s)	60, 234, 269, 316, 522, 989, 1254, 1912
TasI	AATT	9 cut(s)	422, 461, 543, 1169, 1174, 1358, 1484, 1524, 1710
TatI	WGTACW	3 cut(s)	495, 674, 1493
TauI	GCSGC	4 cut(s)	124, 163, 278, 1720
Tru1I	TTAA	5 cut(s)	345, 815, 969, 1173, 1199
Tru9I	TTAA	5 cut(s)	345, 815, 969, 1173, 1199
TscAI	CASTG	3 cut(s)	889, 1389, 1777
TseFI	GTSAC	3 cut(s)	880, 1405, 1584
TseI	GCWGC	8 cut(s)	734, 851, 865, 868, 1326, 1462, 1505, 1924
Tsp45I	GTSAC	3 cut(s)	880, 1405, 1584
TspGWI	ACGGA	2 cut(s)	591, 1750
TspRI	CASTG	3 cut(s)	889, 1389, 1777
Vha464I	CTTAAG	2 cut(s)	344, 968
VpaK11BI	GGWCC	7 cut(s)	22, 45, 142, 468, 960, 1376, 1511
XapI	RAATTY	6 cut(s)	422, 461, 1169, 1358, 1484, 1710
XbaI	TCTAGA	1 cut(s)	823
XceI	RCATGY	1 cut(s)	1123
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1236
XmiI	GTMKAC	3 cut(s)	60, 1059, 1912
XmnI	GAANNNNTTC	2 cut(s)	624, 1358
XspI	CTAG	5 cut(s)	108, 390, 824, 1433, 1602
ZrmI	AGTACT	1 cut(s)	1495
Zsp2I	ATGCAT	1 cut(s)	552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.