Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0006451

Physical Location & Seq

Genomic Coordinates Forward (+)

11876168 .. 11880577

Gene Structure 4410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g16140.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGGCGATGAGCCCCAACGACCGACCTAAAAAGAAAACCTCAACACCGATGCAAGGCCTCGTCGGCTTGATCCGCGAGTCCCTACCGCTTCTGCCCCCGCGCCGGGACGACGGAGGAGGTGGAGGAGGAGGGTTTGGGGGCCTGGTGGGGAAGGTCCGCTCCAGCCTCCGTAATTCGCGAATCGGACTGTTATCCAAGTCTCCTGTTCGTGCTCTTCCTCCGGTTGCTTCGAGAGATGACGCACCGCCGATTCGGTGGCGCAAAGGCGAGTTGATTGGTTCCGGTGCCTTTGGCCGGGTCTACATGGGAATGAACCTCGATTCCGGAGAGCTTTTCGCTGTGAAACAGAGGTACTTAGGGACCGCTAGAGAGGAGGATTCTTTGAATATTCTATTGGAGTTTGTGCCTGGTGGATCCATATCGTCCCTCTTGGGGAAATTTGGATCCTTTCCTGAGTCTGTTATAAGAATGTACACAAAGCAGCTGTTACTGGGTCTTGAATACCTTCACAAGAATGAAATTATGCATAGGGACATCAAGGCTACTATAAATGGTGCCAAGTCAATGAAGGGTACTCCATACTGGATGGCTCCTGAAGTTATTCTCCAGACTGGCCATAGCTTCTCTGCTGACATATGGAGTGTTGGATGTACTGTGATTGAGATGGCTACAGGAAAGCCTCCATGGAGCCAACAGTATCAAGAGGGAACCTTATCTAAGGTCTTCTGCGTCAGAGTTGGTGCAGCATCCATTTGTCACTGGGGATTATCAGGAACCTCGTCCAGTAGTTCATTCTTCATTCATGGTTGTGTGAACCCTTCGATCAGAAGGTCTACCTGTGCCGGCTTGAAGGATATTTGTGATATGGGCACTGTAAGGTGCTCAACTGTATATCCAGGGAATTTTTCAGGAGGGAGCTCCCGCTGGGGAGCTACTAATAACTATGATGACGACATGTGTCAGATTGATGATACGAATGACATTGTCCTTGGTTCATTTGCAAAATTCAGATCTGTGGTTGGACCTGACGAATTAAACAAGAGTTTCAATCCCATGTGTGAACCAACTGACGACTGGCCATGCAAGTTTGATGAAAGTCTGGAACCGGAGAGAAATGGAATTAACTTCTCCCCTTGTCAAACAATACATGAGGCTTCGGGCAGCATTGGAGCATCTCAAAAGGTGGAGACAGAGTTCACATTTCCTTCCGGGCCATCAGCAGTTGAGGATGATGAGGAAGTTACGGAGTCAAAAATAAGAGCCTTCCTAGATGAAAAGGATTCTAATGTTTTAAACTTGCACCTTGAACCTAATCAGGCCTTAGATCTGAAGAAGCTGCAAACACCTCTATATGAAGAGTTCCGTAGCTCATTGAATGCAGCTGGTTTTGGAAATGCAGACTGTGAACATGTTTCAAAGCATCTGAACTTACCTCCTAAAAGTAAGTCACCAAGTCATGCACCTAGTAGAAGATTCTCTACTGCATTTGATGCTGCAGGCCCTGGGAAACATACAAGAGATGTATCAAATGCCAGTGTTGTATATGACCGAGTTTTGCAGGAAATTCAGCCACCTCAGCTTGGTGAATGGAAAGAGCTCCCTCATTATCAGAAAGAATCATTTAGTCTAAGTGCAAGCTTTTCTGATATGCAAAGAAAGTGGAAACAGGAGCTTGATGAAGAGCTCAAGAGGAAGCGAGGCAAGTTTTATTTTGTATTTTCAAGAAGTTTTATTTTGGGGATGGCATTTATGCACGAAATTTTGGTCTTGATTAGTATGATCTTATCTTACTGGAACCGGCTGGATGCAGAGATGATGTGGCAGGCTGGTGTAGGAACGAAAATGCCATCCCCAACCAAAATTCTAGGTCAACAAAGAGAGCCGCTACGGATGGTTTTTCCTGGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

637

Amino Acids

70.3

Weight (kDa)

7.9

Isoelectric Point (pI)

53.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06030
fragaria_vesca	FvH4_4g14910 FvH4_4g14910
malus_domestica	MD13G1186500.v1.1 MD16G1187200.v1.1
prunus_persica	Prupe.1G154200_v2.0.a1 Prupe.1G154200_v2.0.a1
pyrus_communis	pycom13g16140 pycom16g15720
rosa_chinensis	RchiOBHm_Chr4g0417171
rosa_laevigata	RLG00000007924
rosa_multiflora	Rmu_co8320689.1_g000001 Rmu_sc0000959.1_g000002 Rmu_sc0001643.1_g000003
rosa_roxburghii	Rroxscaffold_3G00245000 Rroxscaffold_5G00361000
rosa_rugosa	Rorug02G0282700 Rorug04G0146200
rosa_samantha	Rh2AG335100 Rh4AG209200 Rh4BG206100 Rh4BG206300 Rh4CG220200 Rh4DG206900 Rh5AG248600
rosa_wichuraiana	Rw4G017720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	464
AccB1I	GGYRCC	2 cut(s)	284, 554
AccBSI	CCGCTC	1 cut(s)	159
AccI	GTMKAC	2 cut(s)	300, 833
AccII	CGCG	3 cut(s)	75, 100, 178
AccIII	TCCGGA	1 cut(s)	323
AciI	CCGC	8 cut(s)	73, 86, 98, 157, 245, 363, 922, 1883
AclWI	GGATC	5 cut(s)	64, 408, 421, 438, 451
AcoI	YGGCCR	3 cut(s)	292, 613, 1076
AcsI	RAATTY	6 cut(s)	437, 901, 1004, 1563, 1758, 1860
AcuI	CTGAAG	2 cut(s)	615, 1349
AfaI	GTAC	4 cut(s)	353, 473, 574, 652
AfiI	CCNNNNNNNGG	6 cut(s)	53, 102, 103, 294, 432, 1580
AflIII	ACRYGT	2 cut(s)	954, 1408
AgsI	TTSAA	8 cut(s)	385, 500, 850, 1048, 1307, 1375, 1416, 1722
AjnI	CCWGG	5 cut(s)	141, 406, 895, 1501, 1900
AjuI	GAANNNNNNNTTGG	2 cut(s)	377, 409
AloI	GAACNNNNNNTCC	4 cut(s)	305, 337, 1178, 1210
Alw21I	GWGCWC	5 cut(s)	214, 884, 920, 1599, 1686
Alw26I	GTCTC	2 cut(s)	204, 1181
AlwI	GGATC	5 cut(s)	64, 408, 421, 438, 451
AlwNI	CAGNNNCTG	1 cut(s)	1502
Aor13HI	TCCGGA	1 cut(s)	323
AoxI	GGCC	8 cut(s)	55, 139, 292, 613, 1076, 1211, 1317, 1498
ApeKI	GCWGC	6 cut(s)	481, 743, 1161, 1336, 1379, 1493
ApoI	RAATTY	6 cut(s)	437, 901, 1004, 1563, 1758, 1860
ArsI	GACNNNNNNTTYG	2 cut(s)	1749, 1781
Asp700I	GAANNNNTTC	2 cut(s)	504, 600
AspLEI	GCGC	2 cut(s)	102, 261
AspS9I	GGNCC	6 cut(s)	139, 154, 360, 1022, 1211, 1499
AsuC2I	CCSGG	3 cut(s)	104, 296, 1210
AsuHPI	GGTGA	2 cut(s)	1440, 1595
AvaII	GGWCC	3 cut(s)	154, 360, 1022
BaeGI	GKGCMC	1 cut(s)	872
BalI	TGGCCA	2 cut(s)	615, 1078
BamHI	GGATCC	2 cut(s)	413, 443
BanI	GGYRCC	2 cut(s)	284, 554
BanII	GRGCYC	4 cut(s)	14, 920, 1599, 1686
BarI	GAAGNNNNNNTAC	2 cut(s)	1462, 1494
BbsI	GAAGAC	1 cut(s)	715
Bbv12I	GWGCWC	5 cut(s)	214, 884, 920, 1599, 1686
BbvCI	CCTCAGC	1 cut(s)	1575
BbvI	GCAGC	6 cut(s)	493, 755, 1173, 1323, 1391, 1480
BccI	CCATC	6 cut(s)	580, 658, 1222, 1735, 1855, 1885
BciT130I	CCWGG	5 cut(s)	143, 408, 897, 1503, 1902
BcnI	CCSGG	3 cut(s)	104, 296, 1210
BcoDI	GTCTC	2 cut(s)	204, 1181
BfaI	CTAG	4 cut(s)	366, 1268, 1464, 1865
BfmI	CTRYAG	2 cut(s)	669, 1494
BglI	GCCNNNNNGGC	1 cut(s)	63
BglII	AGATCT	2 cut(s)	1010, 1324
BisI	GCNGC	7 cut(s)	482, 744, 1162, 1337, 1380, 1494, 1883
BlsI	GCNGC	7 cut(s)	483, 745, 1163, 1338, 1381, 1495, 1884
Bme1390I	CCNGG	8 cut(s)	104, 143, 296, 408, 897, 1210, 1503, 1902
Bme18I	GGWCC	3 cut(s)	154, 360, 1022
BmgT120I	GGNCC	6 cut(s)	139, 154, 360, 1022, 1211, 1499
BmrFI	CCNGG	8 cut(s)	104, 143, 296, 408, 897, 1210, 1503, 1902
BmrI	ACTGGG	2 cut(s)	500, 769
BmsI	GCATC	6 cut(s)	39, 755, 1181, 1429, 1480, 1795
BmuI	ACTGGG	2 cut(s)	500, 769
BoxI	GACNNNNGTC	1 cut(s)	957
BpiI	GAAGAC	1 cut(s)	715
BpmI	CTGGAG	2 cut(s)	145, 590
Bpu10I	CCTNAGC	1 cut(s)	1575
BpuEI	CTTGAG	1 cut(s)	1670
BpuMI	CCSGG	3 cut(s)	104, 296, 1210
BsaBI	GATNNNNATC	1 cut(s)	418
BsaJI	CCNNGG	5 cut(s)	683, 896, 988, 1501, 1502
BsaWI	WCCGGW	4 cut(s)	220, 281, 323, 1105
BsaXI	ACNNNNNCTCC	2 cut(s)	1178, 1208
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 102, 103, 294, 432, 1580
Bse118I	RCCGGY	2 cut(s)	842, 1797
Bse1I	ACTGG	8 cut(s)	495, 587, 616, 764, 783, 1079, 1533, 1796
Bse8I	GATNNNNATC	1 cut(s)	418
BseAI	TCCGGA	1 cut(s)	323
BseBI	CCWGG	5 cut(s)	143, 408, 897, 1503, 1902
BseDI	CCNNGG	5 cut(s)	683, 896, 988, 1501, 1502
BseGI	GGATG	8 cut(s)	591, 653, 746, 1234, 1746, 1810, 1847, 1896
BseJI	GATNNNNATC	1 cut(s)	418
BseLI	CCNNNNNNNGG	6 cut(s)	53, 102, 103, 294, 432, 1580
BseMII	CTCAG	2 cut(s)	444, 1589
BseNI	ACTGG	8 cut(s)	495, 587, 616, 764, 783, 1079, 1533, 1796
BseRI	GAGGAG	4 cut(s)	129, 138, 141, 386
BseSI	GKGCMC	1 cut(s)	872
BseXI	GCAGC	6 cut(s)	493, 755, 1173, 1323, 1391, 1480
BseYI	CCCAGC	1 cut(s)	924
BsgI	GTGCAG	1 cut(s)	762
Bsh1236I	CGCG	3 cut(s)	75, 100, 178
Bsh1285I	CGRYCG	1 cut(s)	22
BshFI	GGCC	8 cut(s)	57, 141, 294, 615, 1078, 1213, 1319, 1500
BshNI	GGYRCC	2 cut(s)	284, 554
BsiEI	CGRYCG	1 cut(s)	22
BsiHKAI	GWGCWC	5 cut(s)	214, 884, 920, 1599, 1686
BsiSI	CCGG	9 cut(s)	103, 221, 282, 295, 324, 843, 1106, 1209, 1798
BslFI	GGGAC	5 cut(s)	64, 119, 373, 409, 545
BslI	CCNNNNNNNGG	6 cut(s)	53, 102, 103, 294, 432, 1580
BsmAI	GTCTC	2 cut(s)	204, 1181
BsmFI	GGGAC	5 cut(s)	64, 119, 373, 409, 545
BsmI	GAATGC	1 cut(s)	1381
BsnI	GGCC	8 cut(s)	57, 141, 294, 615, 1078, 1213, 1319, 1500
Bsp1286I	GDGCHC	7 cut(s)	14, 214, 872, 884, 920, 1599, 1686
Bsp13I	TCCGGA	1 cut(s)	323
Bsp1407I	TGTACA	1 cut(s)	471
Bsp143I	GATC	7 cut(s)	69, 413, 443, 822, 1010, 1324, 1779
Bsp19I	CCATGG	1 cut(s)	683
Bsp68I	TCGCGA	1 cut(s)	178
BspACI	CCGC	8 cut(s)	73, 86, 98, 157, 245, 363, 922, 1883
BspANI	GGCC	8 cut(s)	57, 141, 294, 615, 1078, 1213, 1319, 1500
BspCNI	CTCAG	2 cut(s)	445, 1588
BspEI	TCCGGA	1 cut(s)	323
BspFNI	CGCG	3 cut(s)	75, 100, 178
BspMAI	CTGCAG	1 cut(s)	1498
BspPI	GGATC	5 cut(s)	64, 408, 421, 438, 451
BspQI	GCTCTTC	2 cut(s)	219, 1674
BspT107I	GGYRCC	2 cut(s)	284, 554
BsrBI	CCGCTC	1 cut(s)	159
BsrFI	RCCGGY	2 cut(s)	842, 1797
BsrGI	TGTACA	1 cut(s)	471
BsrI	ACTGG	8 cut(s)	495, 587, 616, 764, 783, 1079, 1533, 1796
BssAI	RCCGGY	2 cut(s)	842, 1797
BssECI	CCNNGG	5 cut(s)	683, 896, 988, 1501, 1502
BssMI	GATC	7 cut(s)	69, 413, 443, 822, 1010, 1324, 1779
BssT1I	CCWWGG	2 cut(s)	683, 988
Bst2UI	CCWGG	5 cut(s)	143, 408, 897, 1503, 1902
Bst4CI	ACNGT	6 cut(s)	189, 655, 696, 874, 889, 1403
Bst6I	CTCTTC	3 cut(s)	219, 1350, 1674
BstAPI	GCANNNNNTGC	1 cut(s)	1490
BstAUI	TGTACA	1 cut(s)	471
BstC8I	GCNNGC	4 cut(s)	844, 1498, 1636, 1824
BstDEI	CTNAG	6 cut(s)	355, 453, 717, 1321, 1575, 1628
BstDSI	CCRYGG	1 cut(s)	683
BstF5I	GGATG	8 cut(s)	591, 653, 746, 1234, 1746, 1810, 1847, 1896
BstFNI	CGCG	3 cut(s)	75, 100, 178
BstHHI	GCGC	2 cut(s)	102, 261
BstKTI	GATC	7 cut(s)	72, 416, 446, 825, 1013, 1327, 1782
BstMAI	GTCTC	2 cut(s)	204, 1181
BstMBI	GATC	7 cut(s)	69, 413, 443, 822, 1010, 1324, 1779
BstMCI	CGRYCG	1 cut(s)	22
BstMWI	GCNNNNNNNGC	4 cut(s)	63, 72, 1490, 1576
BstNI	CCWGG	5 cut(s)	143, 408, 897, 1503, 1902
BstNSI	RCATGY	2 cut(s)	958, 1412
BstPAI	GACNNNNGTC	1 cut(s)	957
BstSCI	CCNGG	8 cut(s)	102, 141, 294, 406, 895, 1208, 1501, 1900
BstSFI	CTRYAG	2 cut(s)	669, 1494
BstSLI	GKGCMC	1 cut(s)	872
BstUI	CGCG	3 cut(s)	75, 100, 178
BstV1I	GCAGC	6 cut(s)	493, 755, 1173, 1323, 1391, 1480
BstV2I	GAAGAC	1 cut(s)	715
BstX2I	RGATCY	4 cut(s)	413, 443, 1010, 1324
BstYI	RGATCY	4 cut(s)	413, 443, 1010, 1324
BsuRI	GGCC	8 cut(s)	57, 141, 294, 615, 1078, 1213, 1319, 1500
BtgI	CCRYGG	1 cut(s)	683
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	8 cut(s)	591, 653, 746, 1234, 1746, 1810, 1847, 1896
BtsIMutI	CAGTG	3 cut(s)	757, 870, 1540
BtuMI	TCGCGA	1 cut(s)	178
Cac8I	GCNNGC	4 cut(s)	844, 1498, 1636, 1824
CaiI	CAGNNNCTG	1 cut(s)	1502
CfoI	GCGC	2 cut(s)	102, 261
Cfr10I	RCCGGY	2 cut(s)	842, 1797
Cfr13I	GGNCC	6 cut(s)	139, 154, 360, 1022, 1211, 1499
CseI	GACGC	2 cut(s)	248, 718
Csp6I	GTAC	4 cut(s)	352, 472, 573, 651
CspCI	CAANNNNNGTGG	2 cut(s)	1640, 1675
CviAII	CATG	9 cut(s)	304, 684, 803, 955, 1054, 1080, 1148, 1409, 1457
CviQI	GTAC	4 cut(s)	352, 472, 573, 651
DdeI	CTNAG	6 cut(s)	355, 453, 717, 1321, 1575, 1628
DpnI	GATC	7 cut(s)	71, 415, 445, 824, 1012, 1326, 1781
DpnII	GATC	7 cut(s)	69, 413, 443, 822, 1010, 1324, 1779
DraI	TTTAAA	1 cut(s)	1293
EaeI	YGGCCR	3 cut(s)	292, 613, 1076
Eam1104I	CTCTTC	3 cut(s)	219, 1350, 1674
EarI	CTCTTC	3 cut(s)	219, 1350, 1674
Ecl136II	GAGCTC	3 cut(s)	918, 1597, 1684
Eco130I	CCWWGG	2 cut(s)	683, 988
Eco147I	AGGCCT	2 cut(s)	57, 1319
Eco24I	GRGCYC	4 cut(s)	14, 920, 1599, 1686
Eco47I	GGWCC	3 cut(s)	154, 360, 1022
Eco53kI	GAGCTC	3 cut(s)	918, 1597, 1684
Eco57I	CTGAAG	2 cut(s)	615, 1349
EcoICRI	GAGCTC	3 cut(s)	918, 1597, 1684
EcoO109I	RGGNCCY	2 cut(s)	139, 1499
EcoRII	CCWGG	5 cut(s)	141, 406, 895, 1501, 1900
EcoT14I	CCWWGG	2 cut(s)	683, 988
EcoT22I	ATGCAT	1 cut(s)	528
EcoT38I	GRGCYC	4 cut(s)	14, 920, 1599, 1686
ErhI	CCWWGG	2 cut(s)	683, 988
FaeI	CATG	9 cut(s)	307, 687, 806, 958, 1057, 1083, 1151, 1412, 1460
FaqI	GGGAC	5 cut(s)	64, 119, 373, 409, 545
FatI	CATG	9 cut(s)	303, 683, 802, 954, 1053, 1079, 1147, 1408, 1456
FauI	CCCGC	2 cut(s)	105, 929
FauNDI	CATATG	1 cut(s)	635
FblI	GTMKAC	2 cut(s)	300, 833
Fnu4HI	GCNGC	7 cut(s)	482, 744, 1162, 1337, 1380, 1494, 1883
FokI	GGATG	8 cut(s)	598, 660, 733, 1241, 1753, 1817, 1834, 1903
FriOI	GRGCYC	4 cut(s)	14, 920, 1599, 1686
Fsp4HI	GCNGC	7 cut(s)	482, 744, 1162, 1337, 1380, 1494, 1883
FspBI	CTAG	4 cut(s)	366, 1268, 1464, 1865
GlaI	GCGC	2 cut(s)	101, 260
GluI	GCNGC	7 cut(s)	482, 744, 1162, 1337, 1380, 1494, 1883
GsaI	CCCAGC	1 cut(s)	928
GsuI	CTGGAG	2 cut(s)	145, 590
HaeIII	GGCC	8 cut(s)	57, 141, 294, 615, 1078, 1213, 1319, 1500
HapII	CCGG	9 cut(s)	103, 221, 282, 295, 324, 843, 1106, 1209, 1798
HgaI	GACGC	2 cut(s)	248, 718
HhaI	GCGC	2 cut(s)	102, 261
Hin1II	CATG	9 cut(s)	307, 687, 806, 958, 1057, 1083, 1151, 1412, 1460
Hin6I	GCGC	2 cut(s)	100, 259
HinP1I	GCGC	2 cut(s)	100, 259
HincII	GTYRAC	1 cut(s)	1871
HindII	GTYRAC	1 cut(s)	1871
HindIII	AAGCTT	1 cut(s)	1636
HpaII	CCGG	9 cut(s)	103, 221, 282, 295, 324, 843, 1106, 1209, 1798
HphI	GGTGA	2 cut(s)	1440, 1595
Hpy166II	GTNNAC	8 cut(s)	301, 474, 814, 834, 1061, 1197, 1406, 1871
Hpy188I	TCNGA	9 cut(s)	185, 734, 827, 963, 1010, 1329, 1425, 1611, 1645
Hpy8I	GTNNAC	8 cut(s)	301, 474, 814, 834, 1061, 1197, 1406, 1871
Hpy99I	CGWCG	2 cut(s)	65, 113
HpyAV	CCTTC	8 cut(s)	145, 515, 562, 822, 828, 844, 1215, 1273
HpyCH4III	ACNGT	6 cut(s)	189, 655, 696, 874, 889, 1403
HpyF10VI	GCNNNNNNNGC	4 cut(s)	63, 72, 1490, 1576
HpyF3I	CTNAG	6 cut(s)	355, 453, 717, 1321, 1575, 1628
Hsp92II	CATG	9 cut(s)	307, 687, 806, 958, 1057, 1083, 1151, 1412, 1460
HspAI	GCGC	2 cut(s)	100, 259
Kpn2I	TCCGGA	1 cut(s)	323
KroI	GCCGGC	1 cut(s)	842
KroNI	GCCGGC	1 cut(s)	844
Kzo9I	GATC	7 cut(s)	69, 413, 443, 822, 1010, 1324, 1779
LguI	GCTCTTC	2 cut(s)	219, 1674
LmnI	GCTCC	9 cut(s)	164, 595, 687, 915, 923, 929, 1169, 1602, 1669
Lsp1109I	GCAGC	6 cut(s)	493, 755, 1173, 1323, 1391, 1480
LweI	GCATC	6 cut(s)	39, 755, 1181, 1429, 1480, 1795
MaeI	CTAG	4 cut(s)	366, 1268, 1464, 1865
MaeIII	GTNAC	4 cut(s)	486, 755, 1240, 1446
MalI	GATC	7 cut(s)	71, 415, 445, 824, 1012, 1326, 1781
MbiI	CCGCTC	1 cut(s)	159
MboI	GATC	7 cut(s)	69, 413, 443, 822, 1010, 1324, 1779
MboII	GAAGA	7 cut(s)	206, 715, 787, 1342, 1367, 1482, 1691
MflI	RGATCY	4 cut(s)	413, 443, 1010, 1324
MhlI	GDGCHC	7 cut(s)	14, 214, 872, 884, 920, 1599, 1686
MlsI	TGGCCA	2 cut(s)	615, 1078
MluNI	TGGCCA	2 cut(s)	615, 1078
MlyI	GAGTC	3 cut(s)	86, 464, 1256
MmeI	TCCRAC	2 cut(s)	625, 1000
Mox20I	TGGCCA	2 cut(s)	615, 1078
Mph1103I	ATGCAT	1 cut(s)	528
MroI	TCCGGA	1 cut(s)	323
MroNI	GCCGGC	1 cut(s)	842
MroXI	GAANNNNTTC	2 cut(s)	504, 600
MscI	TGGCCA	2 cut(s)	615, 1078
MseI	TTAA	3 cut(s)	1034, 1122, 1292
MslI	CAYNNNNRTG	3 cut(s)	308, 513, 807
Msp20I	TGGCCA	2 cut(s)	615, 1078
MspA1I	CMGCKG	3 cut(s)	484, 924, 1382
MspI	CCGG	9 cut(s)	103, 221, 282, 295, 324, 843, 1106, 1209, 1798
MspR9I	CCNGG	8 cut(s)	104, 143, 296, 408, 897, 1210, 1503, 1902
Mva1269I	GAATGC	1 cut(s)	1381
MvaI	CCWGG	5 cut(s)	143, 408, 897, 1503, 1902
MvnI	CGCG	3 cut(s)	75, 100, 178
MwoI	GCNNNNNNNGC	4 cut(s)	63, 72, 1490, 1576
NaeI	GCCGGC	1 cut(s)	844
NciI	CCSGG	3 cut(s)	104, 296, 1210
NcoI	CCATGG	1 cut(s)	683
NdeI	CATATG	1 cut(s)	635
NdeII	GATC	7 cut(s)	69, 413, 443, 822, 1010, 1324, 1779
NgoMIV	GCCGGC	1 cut(s)	842
NlaIII	CATG	9 cut(s)	307, 687, 806, 958, 1057, 1083, 1151, 1412, 1460
NmuCI	GTSAC	2 cut(s)	755, 1446
NruI	TCGCGA	1 cut(s)	178
NsiI	ATGCAT	1 cut(s)	528
NspI	RCATGY	2 cut(s)	958, 1412
PasI	CCCWGGG	1 cut(s)	1502
PceI	AGGCCT	2 cut(s)	57, 1319
PciI	ACATGT	2 cut(s)	954, 1408
PciSI	GCTCTTC	2 cut(s)	219, 1674
PctI	GAATGC	1 cut(s)	1381
PdiI	GCCGGC	1 cut(s)	844
PdmI	GAANNNNTTC	2 cut(s)	504, 600
PfeI	GAWTC	7 cut(s)	180, 250, 320, 377, 1280, 1473, 1616
PflFI	GACNNNGTC	1 cut(s)	983
PfoI	TCCNGGA	1 cut(s)	1900
PkrI	GCNGC	7 cut(s)	483, 745, 1163, 1338, 1381, 1495, 1884
PleI	GAGTC	3 cut(s)	85, 463, 1255
PpsI	GAGTC	3 cut(s)	85, 463, 1255
PscI	ACATGT	2 cut(s)	954, 1408
PshAI	GACNNNNGTC	1 cut(s)	957
PsiI	TTATAA	1 cut(s)	464
Psp124BI	GAGCTC	3 cut(s)	920, 1599, 1686
Psp6I	CCWGG	5 cut(s)	141, 406, 895, 1501, 1900
PspFI	CCCAGC	1 cut(s)	924
PspGI	CCWGG	5 cut(s)	141, 406, 895, 1501, 1900
PspPI	GGNCC	6 cut(s)	139, 154, 360, 1022, 1211, 1499
PstI	CTGCAG	1 cut(s)	1498
PstNI	CAGNNNCTG	1 cut(s)	1502
PsuI	RGATCY	4 cut(s)	413, 443, 1010, 1324
PsyI	GACNNNGTC	1 cut(s)	983
PvuII	CAGCTG	2 cut(s)	484, 1382
RruI	TCGCGA	1 cut(s)	178
RsaI	GTAC	4 cut(s)	353, 473, 574, 652
RsaNI	GTAC	4 cut(s)	352, 472, 573, 651
RseI	CAYNNNNRTG	3 cut(s)	308, 513, 807
SacI	GAGCTC	3 cut(s)	920, 1599, 1686
SapI	GCTCTTC	2 cut(s)	219, 1674
SaqAI	TTAA	3 cut(s)	1034, 1122, 1292
SatI	GCNGC	7 cut(s)	482, 744, 1162, 1337, 1380, 1494, 1883
Sau3AI	GATC	7 cut(s)	69, 413, 443, 822, 1010, 1324, 1779
Sau96I	GGNCC	6 cut(s)	139, 154, 360, 1022, 1211, 1499
SchI	GAGTC	3 cut(s)	86, 464, 1256
ScrFI	CCNGG	8 cut(s)	104, 143, 296, 408, 897, 1210, 1503, 1902
SduI	GDGCHC	7 cut(s)	14, 214, 872, 884, 920, 1599, 1686
SfaNI	GCATC	6 cut(s)	39, 755, 1181, 1429, 1480, 1795
SfcI	CTRYAG	2 cut(s)	669, 1494
SinI	GGWCC	3 cut(s)	154, 360, 1022
SmiMI	CAYNNNNRTG	3 cut(s)	308, 513, 807
SmlI	CTYRAG	1 cut(s)	1685
SmoI	CTYRAG	1 cut(s)	1685
SseBI	AGGCCT	2 cut(s)	57, 1319
SsiI	CCGC	8 cut(s)	73, 86, 98, 157, 245, 363, 922, 1883
SspI	AATATT	1 cut(s)	388
SspMI	CTAG	4 cut(s)	366, 1268, 1464, 1865
SstI	GAGCTC	3 cut(s)	920, 1599, 1686
StuI	AGGCCT	2 cut(s)	57, 1319
StyD4I	CCNGG	8 cut(s)	102, 141, 294, 406, 895, 1208, 1501, 1900
StyI	CCWWGG	2 cut(s)	683, 988
TaaI	ACNGT	6 cut(s)	189, 655, 696, 874, 889, 1403
TaqI	TCGA	3 cut(s)	230, 318, 821
TaqII	GACCGA	2 cut(s)	36, 1563
TatI	WGTACW	2 cut(s)	471, 650
TauI	GCSGC	1 cut(s)	1885
TfiI	GAWTC	7 cut(s)	180, 250, 320, 377, 1280, 1473, 1616
Tru1I	TTAA	3 cut(s)	1034, 1122, 1292
Tru9I	TTAA	3 cut(s)	1034, 1122, 1292
TscAI	CASTG	3 cut(s)	764, 877, 1540
TseFI	GTSAC	2 cut(s)	755, 1446
TseI	GCWGC	6 cut(s)	481, 743, 1161, 1336, 1379, 1493
Tsp45I	GTSAC	2 cut(s)	755, 1446
TspGWI	ACGGA	5 cut(s)	126, 158, 1259, 1352, 1903
TspRI	CASTG	3 cut(s)	764, 877, 1540
Tth111I	GACNNNGTC	1 cut(s)	983
VpaK11BI	GGWCC	3 cut(s)	154, 360, 1022
XapI	RAATTY	6 cut(s)	437, 901, 1004, 1563, 1758, 1860
XceI	RCATGY	2 cut(s)	958, 1412
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1071
XmiI	GTMKAC	2 cut(s)	300, 833
XmnI	GAANNNNTTC	2 cut(s)	504, 600
XspI	CTAG	4 cut(s)	366, 1268, 1464, 1865
Zsp2I	ATGCAT	1 cut(s)	528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.