Rmu_sc0000959.1_g000002

Mitogen-activated protein kinase kinase kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000959.1
Physical Location & Seq
Reverse (-)
2371 .. 5056
2686 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000959.1_g000002.1.cds

Sequence Viewer

Length: 864 bp
atgcaaggcctcgtcggtttggtcctcgagtcccttgacttccggaccagcggactcgtcgacaagatcggctccagcattagaaaatcgagaatcgggcttttcgctaggcctctggcgccgcgtgggcttccttctgtggtccccgatgacgactcgccgcctattcggtggcgcaagggcgagttgattgggtctggtgccttcgggcgggtctatatggggatgaatctcgattccggagagcttattgctttgaaacaggcctggatcgggtccatcggcacagatcttcgctgcctcgctgtgccactgtgggtgagaattgccactagagtcactgtagggaggaccggtacgaggagaggaggagatctggctcagtttcgtgatctgccgtcgctggagctcgcaggaaaagtcgggtcttcaatacaggttcaagtcgggtcaaccggaaaactgagagagtttacacccgggaaacataattttggcttctctactttgtgggagcctgcggttacatttggtgcttccactggcgtcacggtggtggcttcaggctctgctctcgatgcttggggcggtgctgttgtgtcggacgggttagttcgatctgatggtgaccctagttctaagggtggacaacatgttggacatgggattggctcaggaagtggtatggctcaattgacggggtggttgagaggcagtgttcgtcgttctatggatttgttgatggaggattccggcagctgcagtgttccggaatggacagtcgtcgggctacatgcgtcgtgcaagcttgggctccctgcctttgggtttttggctctggctttggtcctatgttttagctag

Protein Analysis

287

Amino Acids

29.99

Weight (kDa)

9.42

Isoelectric Point (pI)

34.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 118, 200
AccI GTMKAC 1 cut(s) 60
AccII CGCG 1 cut(s) 124
AccIII TCCGGA 3 cut(s) 42, 239, 769
AciI CCGC 6 cut(s) 51, 122, 161, 211, 521, 588
AclWI GGATC 1 cut(s) 278
AcuI CTGAAG 1 cut(s) 546
AcyI GRCGYC 2 cut(s) 119, 546
AfaI GTAC 1 cut(s) 358
AfiI CCNNNNNNNGG 4 cut(s) 210, 273, 360, 824
AflIII ACRYGT 1 cut(s) 652
AgeI ACCGGT 1 cut(s) 353
AgsI TTSAA 3 cut(s) 259, 432, 443
AjnI CCWGG 1 cut(s) 266
AleI CACNNNNGTG 1 cut(s) 554
AluBI AGCT 5 cut(s) 247, 409, 759, 808, 861
AluI AGCT 5 cut(s) 247, 409, 759, 808, 861
Alw21I GWGCWC 1 cut(s) 411
AlwI GGATC 1 cut(s) 278
AlwNI CAGNNNCTG 1 cut(s) 569
Ama87I CYCGRG 2 cut(s) 26, 479
Aor13HI TCCGGA 3 cut(s) 42, 239, 769
AoxI GGCC 3 cut(s) 7, 110, 264
ApeKI GCWGC 3 cut(s) 297, 756, 759
AsiGI ACCGGT 1 cut(s) 353
AspLEI GCGC 2 cut(s) 121, 177
AspS9I GGNCC 6 cut(s) 22, 45, 142, 276, 351, 847
AsuC2I CCSGG 2 cut(s) 480, 481
AsuHPI GGTGA 2 cut(s) 331, 638
AvaI CYCGRG 2 cut(s) 26, 479
AvaII GGWCC 6 cut(s) 22, 45, 142, 276, 351, 847
BanI GGYRCC 2 cut(s) 118, 200
BanII GRGCYC 2 cut(s) 411, 816
BbsI GAAGAC 1 cut(s) 420
Bbv12I GWGCWC 1 cut(s) 411
BbvI GCAGC 3 cut(s) 284, 746, 768
BccI CCATC 3 cut(s) 287, 617, 736
BceAI ACGGC 1 cut(s) 382
BciT130I CCWGG 1 cut(s) 268
BcnI CCSGG 2 cut(s) 480, 481
BfaI CTAG 4 cut(s) 108, 333, 633, 862
BfmI CTRYAG 2 cut(s) 342, 760
BfoI RGCGCY 1 cut(s) 122
BglI GCCNNNNNGGC 1 cut(s) 127
BglII AGATCT 2 cut(s) 289, 373
BisI GCNGC 5 cut(s) 122, 161, 298, 757, 760
BlsI GCNGC 5 cut(s) 123, 162, 299, 758, 761
Bme1390I CCNGG 3 cut(s) 268, 480, 481
Bme18I GGWCC 6 cut(s) 22, 45, 142, 276, 351, 847
BmeT110I CYCGRG 2 cut(s) 26, 479
BmgT120I GGNCC 6 cut(s) 22, 45, 142, 276, 351, 847
BmiI GGNNCC 7 cut(s) 73, 120, 144, 202, 277, 516, 815
BmrFI CCNGG 3 cut(s) 268, 480, 481
BmsI GCATC 1 cut(s) 568
BoxI GACNNNNGTC 1 cut(s) 782
BpiI GAAGAC 1 cut(s) 420
BpmI CTGGAG 2 cut(s) 58, 425
Bpu10I CCTNAGC 1 cut(s) 673
BpuMI CCSGG 2 cut(s) 480, 481
BsaHI GRCGYC 2 cut(s) 119, 546
BsaJI CCNNGG 1 cut(s) 479
BsaWI WCCGGW 5 cut(s) 42, 239, 353, 455, 769
BsaXI ACNNNNNCTCC 2 cut(s) 340, 370
Bsc4I CCNNNNNNNGG 4 cut(s) 210, 273, 360, 824
Bse118I RCCGGY 1 cut(s) 353
Bse1I ACTGG 1 cut(s) 547
BseAI TCCGGA 3 cut(s) 42, 239, 769
BseBI CCWGG 1 cut(s) 268
BseDI CCNNGG 1 cut(s) 479
BseGI GGATG 1 cut(s) 231
BseLI CCNNNNNNNGG 4 cut(s) 210, 273, 360, 824
BseMII CTCAG 3 cut(s) 395, 455, 687
BseNI ACTGG 1 cut(s) 547
BseRI GAGGAG 3 cut(s) 376, 381, 384
BseXI GCAGC 3 cut(s) 284, 746, 768
Bsh1236I CGCG 1 cut(s) 124
BshFI GGCC 3 cut(s) 9, 112, 266
BshNI GGYRCC 2 cut(s) 118, 200
BshTI ACCGGT 1 cut(s) 353
BsiHKAI GWGCWC 1 cut(s) 411
BsiHKCI CYCGRG 2 cut(s) 26, 479
BsiSI CCGG 7 cut(s) 43, 240, 354, 456, 480, 753, 770
BslFI GGGAC 2 cut(s) 16, 128
BslI CCNNNNNNNGG 4 cut(s) 210, 273, 360, 824
BsmFI GGGAC 2 cut(s) 16, 128
BsnI GGCC 3 cut(s) 9, 112, 266
BsoBI CYCGRG 2 cut(s) 26, 479
Bsp1286I GDGCHC 2 cut(s) 411, 816
Bsp13I TCCGGA 3 cut(s) 42, 239, 769
Bsp143I GATC 6 cut(s) 66, 270, 289, 373, 391, 617
BspACI CCGC 6 cut(s) 51, 122, 161, 211, 521, 588
BspANI GGCC 3 cut(s) 9, 112, 266
BspCNI CTCAG 3 cut(s) 394, 456, 686
BspEI TCCGGA 3 cut(s) 42, 239, 769
BspFNI CGCG 1 cut(s) 124
BspLI GGNNCC 7 cut(s) 73, 120, 144, 202, 277, 516, 815
BspMAI CTGCAG 1 cut(s) 764
BspPI GGATC 1 cut(s) 278
BspT107I GGYRCC 2 cut(s) 118, 200
BsrFI RCCGGY 1 cut(s) 353
BsrI ACTGG 1 cut(s) 547
BssAI RCCGGY 1 cut(s) 353
BssECI CCNNGG 1 cut(s) 479
BssMI GATC 6 cut(s) 66, 270, 289, 373, 391, 617
BssNI GRCGYC 2 cut(s) 119, 546
Bst2UI CCWGG 1 cut(s) 268
Bst4CI ACNGT 4 cut(s) 315, 343, 553, 781
BstACI GRCGYC 2 cut(s) 119, 546
BstC8I GCNNGC 3 cut(s) 411, 519, 806
BstDEI CTNAG 4 cut(s) 381, 464, 639, 673
BstEII GGTNACC 1 cut(s) 626
BstF5I GGATG 1 cut(s) 231
BstFNI CGCG 1 cut(s) 124
BstH2I RGCGCY 1 cut(s) 122
BstHHI GCGC 2 cut(s) 121, 177
BstKTI GATC 6 cut(s) 69, 273, 292, 376, 394, 620
BstMBI GATC 6 cut(s) 66, 270, 289, 373, 391, 617
BstMWI GCNNNNNNNGC 3 cut(s) 118, 127, 578
BstNI CCWGG 1 cut(s) 268
BstNSI RCATGY 2 cut(s) 656, 797
BstPAI GACNNNNGTC 1 cut(s) 782
BstPI GGTNACC 1 cut(s) 626
BstSCI CCNGG 3 cut(s) 266, 478, 479
BstSFI CTRYAG 2 cut(s) 342, 760
BstUI CGCG 1 cut(s) 124
BstV1I GCAGC 3 cut(s) 284, 746, 768
BstV2I GAAGAC 1 cut(s) 420
BstX2I RGATCY 2 cut(s) 289, 373
BstYI RGATCY 2 cut(s) 289, 373
BsuRI GGCC 3 cut(s) 9, 112, 266
BtsCI GGATG 1 cut(s) 231
BtsI GCAGTG 2 cut(s) 721, 769
BtsIMutI CAGTG 5 cut(s) 311, 339, 540, 721, 769
Cac8I GCNNGC 3 cut(s) 411, 519, 806
CaiI CAGNNNCTG 1 cut(s) 569
CfoI GCGC 2 cut(s) 121, 177
Cfr10I RCCGGY 1 cut(s) 353
Cfr13I GGNCC 6 cut(s) 22, 45, 142, 276, 351, 847
Cfr9I CCCGGG 1 cut(s) 479
CseI GACGC 2 cut(s) 535, 786
Csp6I GTAC 1 cut(s) 357
CspAI ACCGGT 1 cut(s) 353
CviAII CATG 3 cut(s) 653, 662, 794
CviQI GTAC 1 cut(s) 357
DdeI CTNAG 4 cut(s) 381, 464, 639, 673
DinI GGCGCC 1 cut(s) 120
DpnI GATC 6 cut(s) 68, 272, 291, 375, 393, 619
DpnII GATC 6 cut(s) 66, 270, 289, 373, 391, 617
Ecl136II GAGCTC 1 cut(s) 409
Eco147I AGGCCT 3 cut(s) 9, 112, 266
Eco24I GRGCYC 2 cut(s) 411, 816
Eco47I GGWCC 6 cut(s) 22, 45, 142, 276, 351, 847
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 1 cut(s) 546
Eco88I CYCGRG 2 cut(s) 26, 479
Eco91I GGTNACC 1 cut(s) 626
EcoICRI GAGCTC 1 cut(s) 409
EcoO65I GGTNACC 1 cut(s) 626
EcoRII CCWGG 1 cut(s) 266
EcoT38I GRGCYC 2 cut(s) 411, 816
EgeI GGCGCC 1 cut(s) 120
EheI GGCGCC 1 cut(s) 120
FaeI CATG 3 cut(s) 656, 665, 797
FaiI YATR 9 cut(s) 219, 221, 489, 654, 663, 686, 731, 795, 853
FaqI GGGAC 2 cut(s) 16, 128
FatI CATG 3 cut(s) 652, 661, 793
FauI CCCGC 1 cut(s) 204
FblI GTMKAC 1 cut(s) 60
Fnu4HI GCNGC 5 cut(s) 122, 161, 298, 757, 760
FokI GGATG 1 cut(s) 238
FriOI GRGCYC 2 cut(s) 411, 816
Fsp4HI GCNGC 5 cut(s) 122, 161, 298, 757, 760
FspBI CTAG 4 cut(s) 108, 333, 633, 862
GlaI GCGC 2 cut(s) 120, 176
GluI GCNGC 5 cut(s) 122, 161, 298, 757, 760
GsuI CTGGAG 2 cut(s) 58, 425
HaeII RGCGCY 1 cut(s) 122
HaeIII GGCC 3 cut(s) 9, 112, 266
HapII CCGG 7 cut(s) 43, 240, 354, 456, 480, 753, 770
HgaI GACGC 2 cut(s) 535, 786
HhaI GCGC 2 cut(s) 121, 177
Hin1I GRCGYC 2 cut(s) 119, 546
Hin1II CATG 3 cut(s) 656, 665, 797
Hin6I GCGC 2 cut(s) 119, 175
HinP1I GCGC 2 cut(s) 119, 175
HincII GTYRAC 2 cut(s) 61, 453
HindII GTYRAC 2 cut(s) 61, 453
HindIII AAGCTT 1 cut(s) 806
HinfI GANTC 8 cut(s) 29, 54, 93, 155, 229, 236, 336, 749
HpaII CCGG 7 cut(s) 43, 240, 354, 456, 480, 753, 770
HphI GGTGA 2 cut(s) 331, 638
Hpy166II GTNNAC 4 cut(s) 61, 453, 474, 647
Hpy188I TCNGA 2 cut(s) 604, 622
Hpy188III TCNNGA 8 cut(s) 43, 90, 233, 240, 389, 575, 675, 770
Hpy8I GTNNAC 4 cut(s) 61, 453, 474, 647
Hpy99I CGWCG 6 cut(s) 17, 62, 403, 726, 788, 802
HpyAV CCTTC 2 cut(s) 144, 214
HpyCH4III ACNGT 4 cut(s) 315, 343, 553, 781
HpyCH4V TGCA 3 cut(s) 4, 762, 804
HpyF10VI GCNNNNNNNGC 3 cut(s) 118, 127, 578
HpyF3I CTNAG 4 cut(s) 381, 464, 639, 673
Hsp92I GRCGYC 2 cut(s) 119, 546
Hsp92II CATG 3 cut(s) 656, 665, 797
HspAI GCGC 2 cut(s) 119, 175
KasI GGCGCC 1 cut(s) 118
Kpn2I TCCGGA 3 cut(s) 42, 239, 769
Kzo9I GATC 6 cut(s) 66, 270, 289, 373, 391, 617
LmnI GCTCC 4 cut(s) 77, 406, 514, 819
Lsp1109I GCAGC 3 cut(s) 284, 746, 768
LweI GCATC 1 cut(s) 568
MaeI CTAG 4 cut(s) 108, 333, 633, 862
MaeIII GTNAC 4 cut(s) 337, 523, 547, 626
MalI GATC 6 cut(s) 68, 272, 291, 375, 393, 619
MboI GATC 6 cut(s) 66, 270, 289, 373, 391, 617
MboII GAAGA 2 cut(s) 284, 420
MfeI CAATTG 1 cut(s) 692
MflI RGATCY 2 cut(s) 289, 373
MhlI GDGCHC 2 cut(s) 411, 816
MluCI AATT 3 cut(s) 324, 490, 692
Mly113I GGCGCC 1 cut(s) 119
MlyI GAGTC 4 cut(s) 38, 48, 149, 345
MmeI TCCRAC 2 cut(s) 582, 637
MroI TCCGGA 3 cut(s) 42, 239, 769
MslI CAYNNNNRTG 1 cut(s) 554
MspA1I CMGCKG 2 cut(s) 51, 759
MspI CCGG 7 cut(s) 43, 240, 354, 456, 480, 753, 770
MspR9I CCNGG 3 cut(s) 268, 480, 481
MunI CAATTG 1 cut(s) 692
MvaI CCWGG 1 cut(s) 268
MvnI CGCG 1 cut(s) 124
MwoI GCNNNNNNNGC 3 cut(s) 118, 127, 578
NarI GGCGCC 1 cut(s) 119
NciI CCSGG 2 cut(s) 480, 481
NdeII GATC 6 cut(s) 66, 270, 289, 373, 391, 617
NlaIII CATG 3 cut(s) 656, 665, 797
NlaIV GGNNCC 7 cut(s) 73, 120, 144, 202, 277, 516, 815
NmuCI GTSAC 3 cut(s) 337, 547, 626
NspI RCATGY 2 cut(s) 656, 797
OliI CACNNNNGTG 1 cut(s) 554
PaeR7I CTCGAG 1 cut(s) 26
PceI AGGCCT 3 cut(s) 9, 112, 266
PciI ACATGT 1 cut(s) 652
PfeI GAWTC 4 cut(s) 93, 229, 236, 749
PinAI ACCGGT 1 cut(s) 353
PkrI GCNGC 5 cut(s) 123, 162, 299, 758, 761
PleI GAGTC 4 cut(s) 37, 48, 149, 344
PluTI GGCGCC 1 cut(s) 122
PpsI GAGTC 4 cut(s) 37, 48, 149, 344
PscI ACATGT 1 cut(s) 652
PshAI GACNNNNGTC 1 cut(s) 782
Psp124BI GAGCTC 1 cut(s) 411
Psp6I CCWGG 1 cut(s) 266
PspEI GGTNACC 1 cut(s) 626
PspGI CCWGG 1 cut(s) 266
PspN4I GGNNCC 7 cut(s) 73, 120, 144, 202, 277, 516, 815
PspPI GGNCC 6 cut(s) 22, 45, 142, 276, 351, 847
PspXI VCTCGAGB 1 cut(s) 26
PstI CTGCAG 1 cut(s) 764
PstNI CAGNNNCTG 1 cut(s) 569
PsuI RGATCY 2 cut(s) 289, 373
PvuII CAGCTG 1 cut(s) 759
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
RseI CAYNNNNRTG 1 cut(s) 554
SacI GAGCTC 1 cut(s) 411
SalI GTCGAC 1 cut(s) 59
SatI GCNGC 5 cut(s) 122, 161, 298, 757, 760
Sau3AI GATC 6 cut(s) 66, 270, 289, 373, 391, 617
Sau96I GGNCC 6 cut(s) 22, 45, 142, 276, 351, 847
SchI GAGTC 4 cut(s) 38, 48, 149, 345
ScrFI CCNGG 3 cut(s) 268, 480, 481
SduI GDGCHC 2 cut(s) 411, 816
SetI ASST 6 cut(s) 249, 411, 441, 761, 810, 863
SfaNI GCATC 1 cut(s) 568
SfcI CTRYAG 2 cut(s) 342, 760
SfoI GGCGCC 1 cut(s) 120
Sfr274I CTCGAG 1 cut(s) 26
SinI GGWCC 6 cut(s) 22, 45, 142, 276, 351, 847
SlaI CTCGAG 1 cut(s) 26
SmaI CCCGGG 1 cut(s) 481
SmiMI CAYNNNNRTG 1 cut(s) 554
SmlI CTYRAG 1 cut(s) 26
SmoI CTYRAG 1 cut(s) 26
Sse9I AATT 3 cut(s) 324, 490, 692
SseBI AGGCCT 3 cut(s) 9, 112, 266
SsiI CCGC 6 cut(s) 51, 122, 161, 211, 521, 588
SspDI GGCGCC 1 cut(s) 118
SspMI CTAG 4 cut(s) 108, 333, 633, 862
SstI GAGCTC 1 cut(s) 411
StuI AGGCCT 3 cut(s) 9, 112, 266
StyD4I CCNGG 3 cut(s) 266, 478, 479
TaaI ACNGT 4 cut(s) 315, 343, 553, 781
TaqI TCGA 6 cut(s) 27, 60, 89, 234, 576, 616
TasI AATT 3 cut(s) 324, 490, 692
TauI GCSGC 2 cut(s) 124, 163
TfiI GAWTC 4 cut(s) 93, 229, 236, 749
TscAI CASTG 5 cut(s) 318, 346, 547, 721, 769
TseFI GTSAC 3 cut(s) 337, 547, 626
TseI GCWGC 3 cut(s) 297, 756, 759
Tsp45I GTSAC 3 cut(s) 337, 547, 626
TspDTI ATGAA 1 cut(s) 242
TspMI CCCGGG 1 cut(s) 479
TspRI CASTG 5 cut(s) 318, 346, 547, 721, 769
VpaK11BI GGWCC 6 cut(s) 22, 45, 142, 276, 351, 847
XceI RCATGY 2 cut(s) 656, 797
XhoI CTCGAG 1 cut(s) 26
XmaI CCCGGG 1 cut(s) 479
XmiI GTMKAC 1 cut(s) 60
XspI CTAG 4 cut(s) 108, 333, 633, 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.