Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0006451

Physical Location & Seq

Genomic Coordinates Forward (+)

11650545 .. 11655075

Gene Structure 4531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g15720.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGCAATGAGCCCCAACGACCGACCTAAAAAGAAAACGCTAACACCAATGCAAGGCCTCGTCGGCTTGATACGCGAGTCCCTGCCGCTTCGGCCTCCGCGCCGGGACGAGGTAGGAGGCGGAGGGGGAGGAGGAGGATTTGGTGGCCTGGTGGGGAAGGTCCGCTCCAGCCTCCGAAATTCGCGAATTGGACTGTTATCCAAGGCTCCGGTTTGTGCTCTTCCTCCGGTTGCTTCGAAAGACGACGCACCGGCGATTCGGTGGCGGAAGGGCGAGTTGATTGGGTCCGGTGCCTTTGGCCGGGTTTACATGGGAATGAACCTCGATTCCGGAGAGCTTCTCGCTGTGAAACAGGTGTTGATTGCGGAAAACAGTGCTTCAAAGGAGAAGACACAGGCTCACATTCGAGAGTTGGAGGAGGAAGTGAAGCTTCTTAAGAATCTCTCACATCCAAATATTGTTAGGTACTTGGGGACTGCTAGAGAGGAGGATTCATTGAATATTCTATTGGAGTTTGTGCCGGGTGGATCCATATCGTCCCTCTTGGGGAAATTTGGATCCTTTCCTGAGTCTGTTATACGAATGTACACAAAGCAGCTGTTATTGGGTCTTGAATACCTTCACAAGAATGAAATTATGCACAGGGACATCAAGGGTGCAAACATCCTTGTGGATAATAAAGGGTGCATTAAACTTGCTGACTTTGGTGCATCAAAGAAAGTTGTTGAACTGGCTACTATAAATGGTGCCAAGTCAATGAAGGGTACTCCATACTGGATGGCGCCTGAAGTTATTCTTCAGACTGGCCATAGCTTCTCCGCTGACATATGGAGCGTTGGATGTACTGTGATTGAGATGGCTACAGGAAAGCCTCCATGGAGCCAACAGTATCAGGAGGTTGCTGTTCTTTTCCATATTGGAACAACAAAATCTCATCCACCCATCCCCGAGCACCTCTCTGCTGAGGCAAAGGATTTTCTGTTAAAATGCTTAGAGAAGGAACCTTGTCTACGGTCTTCTGCGTCAGAGTTAGTGCAGCATCCATTTGTGATTGGGGATTATCAGGAACCTCGTCCAGTACTTCGTGCTTCATTTATGGAAGCTGGAAACGAGATGGCAGCACCTGGGACAGATCTTAAGAACTTCCCTTCGATCAGAAGGTCTACCTGTGCCGGCTTGAAGGATATTTGTGATATTGGCTCTGTTAGGTGCTCAACTGTATATCCAGGGAATTTTTCAGGAGGGAGCTCCCGCTGGGGACCTTCCAATAATGATGACAACGACATGTGTCAGATTGATGATACGGATGACATTGTCCTTGGTTCATTTGCAAAATTTAGATCTGTGGTTGGACCTGATGAATTAAACAAGAGTTTCAATCCCATGTGTGAACCAAATGATGACTGGTCATGCAAGTTTGATGAAAGTCTGGAAACGGAGAGAAGTGGAATTAACTTCTCCCCTTGTCAAACAATACATGAGACTTCTGGGAGCATTGGAGCATCCCAAAAGGTGGAGACTGAATTCACGTTTCCTTCTGGGCCATCAGCAGCTGAAGAGGATGAGGAAGTTACAGAGTCAAAAATAAGAGCCTTCCTGGATGAAAAGGCGTTAGAATTGAAGAAGCTGCAAACACCTCTATATGAAGAGTTCCGTAGCTCATTGAATGCAGCTGGTATTGGAAATGCAAATCGTGAACATGTTTCAAAGCATCTGAACTTACCTCCTAAAAGTAAATCACCGAGTCGCGCACCTAGTAGAAGATTCTCTACAGCATTTGATGCTGCAGGCCCTGGGAAACATACAAGAGATGTATCAAATGCCAGTGGTGTACATGACCGAGTCTTGCAGGAAATTCAGCCACCTCAGCTTAGTGAATGGAAAGAGCTCCCTCATGATCAGAAAGAATCATTTAGTCTGAGTGCAAGCTTTTCTGAGATGCAAAGAAAGTGGAAACAAGAGCTTGACGAAGAGCTCGAGAGGAAGCGAGAGATGATGTGGCAGGCTGGTGCAGGAACGAATACGCCATCCCCAAACAAAATTCAAAGTCGACAAAGAGAACGGCTAGGGATGGTTTTCCCTGGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

697

Amino Acids

76.49

Weight (kDa)

6.61

Isoelectric Point (pI)

51.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06030
fragaria_vesca	FvH4_4g14910 FvH4_4g14910
malus_domestica	MD13G1186500.v1.1 MD16G1187200.v1.1
prunus_persica	Prupe.1G154200_v2.0.a1 Prupe.1G154200_v2.0.a1
pyrus_communis	pycom13g16140 pycom16g15720
rosa_chinensis	RchiOBHm_Chr4g0417171
rosa_laevigata	RLG00000007924
rosa_multiflora	Rmu_co8320689.1_g000001 Rmu_sc0000959.1_g000002 Rmu_sc0001643.1_g000003
rosa_roxburghii	Rroxscaffold_3G00245000 Rroxscaffold_5G00361000
rosa_rugosa	Rorug02G0282700 Rorug04G0146200
rosa_samantha	Rh2AG335100 Rh4AG209200 Rh4BG206100 Rh4BG206300 Rh4CG220200 Rh4DG206900 Rh5AG248600
rosa_wichuraiana	Rw4G017720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	290, 746, 781
AccB7I	CCANNNNNTGG	1 cut(s)	1513
AccBSI	CCGCTC	1 cut(s)	165
AccI	GTMKAC	3 cut(s)	1009, 1163, 2050
AccII	CGCG	4 cut(s)	75, 100, 184, 1749
AccIII	TCCGGA	1 cut(s)	329
AciI	CCGC	8 cut(s)	86, 98, 120, 163, 265, 365, 819, 1252
AclWI	GGATC	4 cut(s)	522, 535, 552, 565
AcoI	YGGCCR	2 cut(s)	298, 805
AcsI	RAATTY	7 cut(s)	178, 551, 1231, 1334, 1523, 1854, 2040
AcuI	CTGAAG	3 cut(s)	782, 807, 1575
AcyI	GRCGYC	1 cut(s)	782
AfaI	GTAC	6 cut(s)	467, 587, 766, 844, 1080, 1833
AfiI	CCNNNNNNNGG	5 cut(s)	53, 109, 300, 546, 1513
AflII	CTTAAG	2 cut(s)	434, 1136
AflIII	ACRYGT	2 cut(s)	1284, 1699
AjnI	CCWGG	6 cut(s)	147, 1123, 1225, 1596, 1792, 2080
AjuI	GAANNNNNNNTTGG	2 cut(s)	491, 523
AloI	GAACNNNNNNTCC	2 cut(s)	311, 343
Alw21I	GWGCWC	6 cut(s)	220, 954, 1214, 1250, 1890, 1977
Alw26I	GTCTC	2 cut(s)	1475, 1511
AlwI	GGATC	4 cut(s)	522, 535, 552, 565
AlwNI	CAGNNNCTG	3 cut(s)	1124, 1553, 1793
Ama87I	CYCGRG	2 cut(s)	947, 1976
Aor13HI	TCCGGA	1 cut(s)	329
AoxI	GGCC	7 cut(s)	55, 92, 145, 298, 805, 1541, 1789
ApeKI	GCWGC	7 cut(s)	595, 1036, 1118, 1550, 1627, 1670, 1784
ApoI	RAATTY	7 cut(s)	178, 551, 1231, 1334, 1523, 1854, 2040
Asp700I	GAANNNNTTC	2 cut(s)	618, 792
AspLEI	GCGC	3 cut(s)	102, 784, 1751
AspS9I	GGNCC	6 cut(s)	160, 285, 1259, 1352, 1541, 1790
AsuC2I	CCSGG	3 cut(s)	104, 302, 522
AsuHPI	GGTGA	1 cut(s)	1731
AsuII	TTCGAA	1 cut(s)	236
AvaI	CYCGRG	2 cut(s)	947, 1976
AvaII	GGWCC	4 cut(s)	160, 285, 1259, 1352
BaeI	ACNNNNGTAYC	2 cut(s)	62, 95
BalI	TGGCCA	1 cut(s)	807
BamHI	GGATCC	2 cut(s)	527, 557
BanI	GGYRCC	3 cut(s)	290, 746, 781
BanII	GRGCYC	4 cut(s)	14, 1250, 1890, 1977
BarI	GAAGNNNNNNTAC	2 cut(s)	1753, 1785
BbsI	GAAGAC	2 cut(s)	395, 1008
Bbv12I	GWGCWC	6 cut(s)	220, 954, 1214, 1250, 1890, 1977
BbvCI	CCTCAGC	2 cut(s)	963, 1866
BbvI	GCAGC	7 cut(s)	607, 1048, 1130, 1562, 1614, 1682, 1771
BccI	CCATC	7 cut(s)	772, 850, 950, 1108, 1552, 2035, 2065
BceAI	ACGGC	1 cut(s)	2078
BciT130I	CCWGG	6 cut(s)	149, 1125, 1227, 1598, 1794, 2082
BclI	TGATCA	1 cut(s)	1897
BcnI	CCSGG	3 cut(s)	104, 302, 522
BcoDI	GTCTC	2 cut(s)	1475, 1511
BfaI	CTAG	3 cut(s)	480, 1755, 2066
BfmI	CTRYAG	3 cut(s)	861, 1770, 1785
BfoI	RGCGCY	1 cut(s)	785
BfrI	CTTAAG	2 cut(s)	434, 1136
BglI	GCCNNNNNGGC	2 cut(s)	63, 91
BglII	AGATCT	2 cut(s)	1132, 1340
BisI	GCNGC	8 cut(s)	86, 596, 1037, 1119, 1551, 1628, 1671, 1785
BlsI	GCNGC	8 cut(s)	87, 597, 1038, 1120, 1552, 1629, 1672, 1786
BmcAI	AGTACT	1 cut(s)	1080
Bme1390I	CCNGG	9 cut(s)	104, 149, 302, 522, 1125, 1227, 1598, 1794, 2082
Bme18I	GGWCC	4 cut(s)	160, 285, 1259, 1352
BmeT110I	CYCGRG	2 cut(s)	947, 1976
BmgT120I	GGNCC	6 cut(s)	160, 285, 1259, 1352, 1541, 1790
BmrFI	CCNGG	9 cut(s)	104, 149, 302, 522, 1125, 1227, 1598, 1794, 2082
BmsI	GCATC	6 cut(s)	719, 1048, 1511, 1720, 1771, 1929
BoxI	GACNNNNGTC	1 cut(s)	1287
BpiI	GAAGAC	2 cut(s)	395, 1008
BplI	GAGNNNNNCTC	4 cut(s)	324, 356, 941, 973
BpmI	CTGGAG	1 cut(s)	151
Bpu10I	CCTNAGC	2 cut(s)	963, 1866
Bpu14I	TTCGAA	1 cut(s)	236
BpuMI	CCSGG	3 cut(s)	104, 302, 522
BsaBI	GATNNNNATC	1 cut(s)	532
BsaHI	GRCGYC	1 cut(s)	782
BsaJI	CCNNGG	8 cut(s)	201, 875, 1124, 1226, 1318, 1792, 1793, 2080
BsaWI	WCCGGW	4 cut(s)	208, 226, 287, 329
Bsc4I	CCNNNNNNNGG	5 cut(s)	53, 109, 300, 546, 1513
Bse118I	RCCGGY	2 cut(s)	250, 1172
Bse1I	ACTGG	6 cut(s)	735, 779, 808, 1076, 1409, 1824
Bse3DI	GCAATG	1 cut(s)	12
Bse8I	GATNNNNATC	1 cut(s)	532
BseAI	TCCGGA	1 cut(s)	329
BseBI	CCWGG	6 cut(s)	149, 1125, 1227, 1598, 1794, 2082
BseDI	CCNNGG	8 cut(s)	201, 875, 1124, 1226, 1318, 1792, 1793, 2080
BseJI	GATNNNNATC	1 cut(s)	532
BseLI	CCNNNNNNNGG	5 cut(s)	53, 109, 300, 546, 1513
BseMI	GCAATG	1 cut(s)	12
BseMII	CTCAG	5 cut(s)	558, 954, 1880, 1910, 1926
BseNI	ACTGG	6 cut(s)	735, 779, 808, 1076, 1409, 1824
BseRI	GAGGAG	4 cut(s)	144, 147, 431, 500
BseXI	GCAGC	7 cut(s)	607, 1048, 1130, 1562, 1614, 1682, 1771
BseYI	CCCAGC	1 cut(s)	1254
BsgI	GTGCAG	2 cut(s)	1055, 2031
Bsh1236I	CGCG	4 cut(s)	75, 100, 184, 1749
Bsh1285I	CGRYCG	1 cut(s)	22
BshFI	GGCC	7 cut(s)	57, 94, 147, 300, 807, 1543, 1791
BshNI	GGYRCC	3 cut(s)	290, 746, 781
BsiEI	CGRYCG	1 cut(s)	22
BsiHKAI	GWGCWC	6 cut(s)	220, 954, 1214, 1250, 1890, 1977
BsiHKCI	CYCGRG	2 cut(s)	947, 1976
BsiSI	CCGG	9 cut(s)	103, 209, 227, 251, 288, 301, 330, 521, 1173
BslFI	GGGAC	7 cut(s)	64, 119, 487, 523, 659, 1141, 1272
BslI	CCNNNNNNNGG	5 cut(s)	53, 109, 300, 546, 1513
BsmAI	GTCTC	2 cut(s)	1475, 1511
BsmFI	GGGAC	7 cut(s)	64, 119, 487, 523, 659, 1141, 1272
BsmI	GAATGC	1 cut(s)	1672
BsnI	GGCC	7 cut(s)	57, 94, 147, 300, 807, 1543, 1791
BsoBI	CYCGRG	2 cut(s)	947, 1976
Bsp119I	TTCGAA	1 cut(s)	236
Bsp1286I	GDGCHC	7 cut(s)	14, 220, 954, 1214, 1250, 1890, 1977
Bsp13I	TCCGGA	1 cut(s)	329
Bsp1407I	TGTACA	2 cut(s)	585, 1831
Bsp143I	GATC	6 cut(s)	527, 557, 1132, 1152, 1340, 1897
Bsp19I	CCATGG	1 cut(s)	875
Bsp68I	TCGCGA	1 cut(s)	184
BspACI	CCGC	8 cut(s)	86, 98, 120, 163, 265, 365, 819, 1252
BspANI	GGCC	7 cut(s)	57, 94, 147, 300, 807, 1543, 1791
BspCNI	CTCAG	5 cut(s)	559, 955, 1879, 1911, 1927
BspEI	TCCGGA	1 cut(s)	329
BspFNI	CGCG	4 cut(s)	75, 100, 184, 1749
BspHI	TCATGA	1 cut(s)	1894
BspMAI	CTGCAG	1 cut(s)	1789
BspPI	GGATC	4 cut(s)	522, 535, 552, 565
BspQI	GCTCTTC	2 cut(s)	225, 1965
BspT104I	TTCGAA	1 cut(s)	236
BspT107I	GGYRCC	3 cut(s)	290, 746, 781
BspTI	CTTAAG	2 cut(s)	434, 1136
BsrBI	CCGCTC	1 cut(s)	165
BsrDI	GCAATG	1 cut(s)	12
BsrFI	RCCGGY	2 cut(s)	250, 1172
BsrGI	TGTACA	2 cut(s)	585, 1831
BsrI	ACTGG	6 cut(s)	735, 779, 808, 1076, 1409, 1824
BssAI	RCCGGY	2 cut(s)	250, 1172
BssECI	CCNNGG	8 cut(s)	201, 875, 1124, 1226, 1318, 1792, 1793, 2080
BssMI	GATC	6 cut(s)	527, 557, 1132, 1152, 1340, 1897
BssNI	GRCGYC	1 cut(s)	782
BssT1I	CCWWGG	3 cut(s)	201, 875, 1318
Bst2UI	CCWGG	6 cut(s)	149, 1125, 1227, 1598, 1794, 2082
Bst4CI	ACNGT	6 cut(s)	195, 374, 847, 888, 1014, 1219
Bst6I	CTCTTC	4 cut(s)	225, 1551, 1641, 1965
BstACI	GRCGYC	1 cut(s)	782
BstAFI	CTTAAG	2 cut(s)	434, 1136
BstAPI	GCANNNNNTGC	1 cut(s)	1781
BstAUI	TGTACA	2 cut(s)	585, 1831
BstBI	TTCGAA	1 cut(s)	236
BstC8I	GCNNGC	4 cut(s)	1174, 1789, 1927, 2004
BstDEI	CTNAG	7 cut(s)	567, 963, 991, 1866, 1871, 1919, 1935
BstDSI	CCRYGG	1 cut(s)	875
BstFNI	CGCG	4 cut(s)	75, 100, 184, 1749
BstH2I	RGCGCY	1 cut(s)	785
BstHHI	GCGC	3 cut(s)	102, 784, 1751
BstKTI	GATC	6 cut(s)	530, 560, 1135, 1155, 1343, 1900
BstMAI	GTCTC	2 cut(s)	1475, 1511
BstMBI	GATC	6 cut(s)	527, 557, 1132, 1152, 1340, 1897
BstMCI	CGRYCG	1 cut(s)	22
BstMWI	GCNNNNNNNGC	5 cut(s)	63, 72, 91, 1781, 1867
BstNI	CCWGG	6 cut(s)	149, 1125, 1227, 1598, 1794, 2082
BstNSI	RCATGY	2 cut(s)	1288, 1703
BstPAI	GACNNNNGTC	1 cut(s)	1287
BstSCI	CCNGG	9 cut(s)	102, 147, 300, 520, 1123, 1225, 1596, 1792, 2080
BstSFI	CTRYAG	3 cut(s)	861, 1770, 1785
BstUI	CGCG	4 cut(s)	75, 100, 184, 1749
BstV1I	GCAGC	7 cut(s)	607, 1048, 1130, 1562, 1614, 1682, 1771
BstV2I	GAAGAC	2 cut(s)	395, 1008
BstX2I	RGATCY	4 cut(s)	527, 557, 1132, 1340
BstYI	RGATCY	4 cut(s)	527, 557, 1132, 1340
BsuRI	GGCC	7 cut(s)	57, 94, 147, 300, 807, 1543, 1791
BtgI	CCRYGG	1 cut(s)	875
BtsIMutI	CAGTG	2 cut(s)	379, 1831
BtuMI	TCGCGA	1 cut(s)	184
Cac8I	GCNNGC	4 cut(s)	1174, 1789, 1927, 2004
CaiI	CAGNNNCTG	3 cut(s)	1124, 1553, 1793
CciI	TCATGA	1 cut(s)	1894
CfoI	GCGC	3 cut(s)	102, 784, 1751
Cfr10I	RCCGGY	2 cut(s)	250, 1172
Cfr13I	GGNCC	6 cut(s)	160, 285, 1259, 1352, 1541, 1790
CseI	GACGC	2 cut(s)	254, 1011
Csp6I	GTAC	6 cut(s)	466, 586, 765, 843, 1079, 1832
CspCI	CAANNNNNGTGG	2 cut(s)	1931, 1966
CviAII	CATG	9 cut(s)	310, 876, 1285, 1384, 1410, 1478, 1700, 1835, 1895
CviQI	GTAC	6 cut(s)	466, 586, 765, 843, 1079, 1832
DdeI	CTNAG	7 cut(s)	567, 963, 991, 1866, 1871, 1919, 1935
DinI	GGCGCC	1 cut(s)	783
DpnI	GATC	6 cut(s)	529, 559, 1134, 1154, 1342, 1899
DpnII	GATC	6 cut(s)	527, 557, 1132, 1152, 1340, 1897
EaeI	YGGCCR	2 cut(s)	298, 805
Eam1104I	CTCTTC	4 cut(s)	225, 1551, 1641, 1965
EarI	CTCTTC	4 cut(s)	225, 1551, 1641, 1965
EciI	GGCGGA	2 cut(s)	135, 280
Ecl136II	GAGCTC	3 cut(s)	1248, 1888, 1975
Eco130I	CCWWGG	3 cut(s)	201, 875, 1318
Eco147I	AGGCCT	1 cut(s)	57
Eco24I	GRGCYC	4 cut(s)	14, 1250, 1890, 1977
Eco47I	GGWCC	4 cut(s)	160, 285, 1259, 1352
Eco53kI	GAGCTC	3 cut(s)	1248, 1888, 1975
Eco57I	CTGAAG	3 cut(s)	782, 807, 1575
Eco88I	CYCGRG	2 cut(s)	947, 1976
EcoICRI	GAGCTC	3 cut(s)	1248, 1888, 1975
EcoO109I	RGGNCCY	2 cut(s)	1259, 1790
EcoRI	GAATTC	1 cut(s)	1523
EcoRII	CCWGG	6 cut(s)	147, 1123, 1225, 1596, 1792, 2080
EcoT14I	CCWWGG	3 cut(s)	201, 875, 1318
EcoT38I	GRGCYC	4 cut(s)	14, 1250, 1890, 1977
EgeI	GGCGCC	1 cut(s)	783
EheI	GGCGCC	1 cut(s)	783
ErhI	CCWWGG	3 cut(s)	201, 875, 1318
FaeI	CATG	9 cut(s)	313, 879, 1288, 1387, 1413, 1481, 1703, 1838, 1898
FalI	AAGNNNNNCTT	4 cut(s)	414, 446, 780, 812
FaqI	GGGAC	7 cut(s)	64, 119, 487, 523, 659, 1141, 1272
FatI	CATG	9 cut(s)	309, 875, 1284, 1383, 1409, 1477, 1699, 1834, 1894
FauI	CCCGC	1 cut(s)	1259
FauNDI	CATATG	1 cut(s)	827
FbaI	TGATCA	1 cut(s)	1897
FblI	GTMKAC	3 cut(s)	1009, 1163, 2050
Fnu4HI	GCNGC	8 cut(s)	86, 596, 1037, 1119, 1551, 1628, 1671, 1785
FriOI	GRGCYC	4 cut(s)	14, 1250, 1890, 1977
Fsp4HI	GCNGC	8 cut(s)	86, 596, 1037, 1119, 1551, 1628, 1671, 1785
FspBI	CTAG	3 cut(s)	480, 1755, 2066
GlaI	GCGC	3 cut(s)	101, 783, 1750
GluI	GCNGC	8 cut(s)	86, 596, 1037, 1119, 1551, 1628, 1671, 1785
GsaI	CCCAGC	1 cut(s)	1258
GsuI	CTGGAG	1 cut(s)	151
HaeII	RGCGCY	1 cut(s)	785
HaeIII	GGCC	7 cut(s)	57, 94, 147, 300, 807, 1543, 1791
HapII	CCGG	9 cut(s)	103, 209, 227, 251, 288, 301, 330, 521, 1173
HgaI	GACGC	2 cut(s)	254, 1011
HhaI	GCGC	3 cut(s)	102, 784, 1751
Hin1I	GRCGYC	1 cut(s)	782
Hin1II	CATG	9 cut(s)	313, 879, 1288, 1387, 1413, 1481, 1703, 1838, 1898
Hin6I	GCGC	3 cut(s)	100, 782, 1749
HinP1I	GCGC	3 cut(s)	100, 782, 1749
HincII	GTYRAC	1 cut(s)	2051
HindII	GTYRAC	1 cut(s)	2051
HindIII	AAGCTT	2 cut(s)	428, 1927
HpaII	CCGG	9 cut(s)	103, 209, 227, 251, 288, 301, 330, 521, 1173
HphI	GGTGA	1 cut(s)	1731
Hpy166II	GTNNAC	8 cut(s)	307, 588, 1010, 1164, 1391, 1697, 1832, 2051
Hpy188I	TCNGA	9 cut(s)	176, 801, 1027, 1157, 1293, 1716, 1902, 1920, 1936
Hpy8I	GTNNAC	8 cut(s)	307, 588, 1010, 1164, 1391, 1697, 1832, 2051
Hpy99I	CGWCG	2 cut(s)	65, 248
HpyCH4III	ACNGT	6 cut(s)	195, 374, 847, 888, 1014, 1219
HpyCH4IV	ACGT	1 cut(s)	1529
HpyF10VI	GCNNNNNNNGC	5 cut(s)	63, 72, 91, 1781, 1867
HpyF3I	CTNAG	7 cut(s)	567, 963, 991, 1866, 1871, 1919, 1935
HpySE526I	ACGT	1 cut(s)	1529
Hsp92I	GRCGYC	1 cut(s)	782
Hsp92II	CATG	9 cut(s)	313, 879, 1288, 1387, 1413, 1481, 1703, 1838, 1898
HspAI	GCGC	3 cut(s)	100, 782, 1749
KasI	GGCGCC	1 cut(s)	781
Kpn2I	TCCGGA	1 cut(s)	329
KroI	GCCGGC	1 cut(s)	1172
KroNI	GCCGGC	1 cut(s)	1174
Ksp22I	TGATCA	1 cut(s)	1897
Kzo9I	GATC	6 cut(s)	527, 557, 1132, 1152, 1340, 1897
LguI	GCTCTTC	2 cut(s)	225, 1965
LmnI	GCTCC	9 cut(s)	170, 211, 831, 879, 1245, 1253, 1491, 1499, 1893
Lsp1109I	GCAGC	7 cut(s)	607, 1048, 1130, 1562, 1614, 1682, 1771
LweI	GCATC	6 cut(s)	719, 1048, 1511, 1720, 1771, 1929
MaeI	CTAG	3 cut(s)	480, 1755, 2066
MaeII	ACGT	1 cut(s)	1529
MaeIII	GTNAC	1 cut(s)	1570
MalI	GATC	6 cut(s)	529, 559, 1134, 1154, 1342, 1899
MbiI	CCGCTC	1 cut(s)	165
MboI	GATC	6 cut(s)	527, 557, 1132, 1152, 1340, 1897
MboII	GAAGA	9 cut(s)	212, 400, 788, 1008, 1568, 1633, 1658, 1773, 1982
MflI	RGATCY	4 cut(s)	527, 557, 1132, 1340
MhlI	GDGCHC	7 cut(s)	14, 220, 954, 1214, 1250, 1890, 1977
MlsI	TGGCCA	1 cut(s)	807
MluNI	TGGCCA	1 cut(s)	807
Mly113I	GGCGCC	1 cut(s)	782
MlyI	GAGTC	5 cut(s)	86, 578, 1586, 1753, 1851
MmeI	TCCRAC	3 cut(s)	393, 817, 1330
Mox20I	TGGCCA	1 cut(s)	807
MroI	TCCGGA	1 cut(s)	329
MroNI	GCCGGC	1 cut(s)	1172
MroXI	GAANNNNTTC	2 cut(s)	618, 792
MscI	TGGCCA	1 cut(s)	807
MseI	TTAA	6 cut(s)	435, 690, 983, 1137, 1364, 1452
MslI	CAYNNNNRTG	3 cut(s)	314, 627, 668
Msp20I	TGGCCA	1 cut(s)	807
MspA1I	CMGCKG	5 cut(s)	598, 821, 1254, 1553, 1673
MspCI	CTTAAG	2 cut(s)	434, 1136
MspI	CCGG	9 cut(s)	103, 209, 227, 251, 288, 301, 330, 521, 1173
MspR9I	CCNGG	9 cut(s)	104, 149, 302, 522, 1125, 1227, 1598, 1794, 2082
Mva1269I	GAATGC	1 cut(s)	1672
MvaI	CCWGG	6 cut(s)	149, 1125, 1227, 1598, 1794, 2082
MvnI	CGCG	4 cut(s)	75, 100, 184, 1749
MwoI	GCNNNNNNNGC	5 cut(s)	63, 72, 91, 1781, 1867
NaeI	GCCGGC	1 cut(s)	1174
NarI	GGCGCC	1 cut(s)	782
NciI	CCSGG	3 cut(s)	104, 302, 522
NcoI	CCATGG	1 cut(s)	875
NdeI	CATATG	1 cut(s)	827
NdeII	GATC	6 cut(s)	527, 557, 1132, 1152, 1340, 1897
NgoMIV	GCCGGC	1 cut(s)	1172
NlaIII	CATG	9 cut(s)	313, 879, 1288, 1387, 1413, 1481, 1703, 1838, 1898
NruI	TCGCGA	1 cut(s)	184
NspI	RCATGY	2 cut(s)	1288, 1703
NspV	TTCGAA	1 cut(s)	236
PaeR7I	CTCGAG	1 cut(s)	1976
PagI	TCATGA	1 cut(s)	1894
PasI	CCCWGGG	1 cut(s)	1793
PceI	AGGCCT	1 cut(s)	57
PciI	ACATGT	2 cut(s)	1284, 1699
PciSI	GCTCTTC	2 cut(s)	225, 1965
PcsI	WCGNNNNNNNCGW	1 cut(s)	1974
PctI	GAATGC	1 cut(s)	1672
PdiI	GCCGGC	1 cut(s)	1174
PdmI	GAANNNNTTC	2 cut(s)	618, 792
PfeI	GAWTC	6 cut(s)	256, 326, 439, 491, 1764, 1907
PflFI	GACNNNGTC	2 cut(s)	1313, 1841
PflMI	CCANNNNNTGG	1 cut(s)	1513
PfoI	TCCNGGA	1 cut(s)	1596
PkrI	GCNGC	8 cut(s)	87, 597, 1038, 1120, 1552, 1629, 1672, 1786
PleI	GAGTC	5 cut(s)	85, 577, 1585, 1752, 1850
PluTI	GGCGCC	1 cut(s)	785
PpsI	GAGTC	5 cut(s)	85, 577, 1585, 1752, 1850
PpuMI	RGGWCCY	1 cut(s)	1259
PscI	ACATGT	2 cut(s)	1284, 1699
PshAI	GACNNNNGTC	1 cut(s)	1287
Psp124BI	GAGCTC	3 cut(s)	1250, 1890, 1977
Psp5II	RGGWCCY	1 cut(s)	1259
Psp6I	CCWGG	6 cut(s)	147, 1123, 1225, 1596, 1792, 2080
PspFI	CCCAGC	1 cut(s)	1254
PspGI	CCWGG	6 cut(s)	147, 1123, 1225, 1596, 1792, 2080
PspPI	GGNCC	6 cut(s)	160, 285, 1259, 1352, 1541, 1790
PspPPI	RGGWCCY	1 cut(s)	1259
PsrI	GAACNNNNNNTAC	2 cut(s)	993, 1025
PstI	CTGCAG	1 cut(s)	1789
PstNI	CAGNNNCTG	3 cut(s)	1124, 1553, 1793
PsuI	RGATCY	4 cut(s)	527, 557, 1132, 1340
PsyI	GACNNNGTC	2 cut(s)	1313, 1841
PvuII	CAGCTG	3 cut(s)	598, 1553, 1673
RruI	TCGCGA	1 cut(s)	184
RsaI	GTAC	6 cut(s)	467, 587, 766, 844, 1080, 1833
RsaNI	GTAC	6 cut(s)	466, 586, 765, 843, 1079, 1832
RseI	CAYNNNNRTG	3 cut(s)	314, 627, 668
SacI	GAGCTC	3 cut(s)	1250, 1890, 1977
SalI	GTCGAC	1 cut(s)	2049
SapI	GCTCTTC	2 cut(s)	225, 1965
SaqAI	TTAA	6 cut(s)	435, 690, 983, 1137, 1364, 1452
SatI	GCNGC	8 cut(s)	86, 596, 1037, 1119, 1551, 1628, 1671, 1785
Sau3AI	GATC	6 cut(s)	527, 557, 1132, 1152, 1340, 1897
Sau96I	GGNCC	6 cut(s)	160, 285, 1259, 1352, 1541, 1790
ScaI	AGTACT	1 cut(s)	1080
SchI	GAGTC	5 cut(s)	86, 578, 1586, 1753, 1851
ScrFI	CCNGG	9 cut(s)	104, 149, 302, 522, 1125, 1227, 1598, 1794, 2082
SduI	GDGCHC	7 cut(s)	14, 220, 954, 1214, 1250, 1890, 1977
SfaNI	GCATC	6 cut(s)	719, 1048, 1511, 1720, 1771, 1929
SfcI	CTRYAG	3 cut(s)	861, 1770, 1785
SfoI	GGCGCC	1 cut(s)	783
Sfr274I	CTCGAG	1 cut(s)	1976
SfuI	TTCGAA	1 cut(s)	236
SgrAI	CRCCGGYG	1 cut(s)	250
SinI	GGWCC	4 cut(s)	160, 285, 1259, 1352
SlaI	CTCGAG	1 cut(s)	1976
SmiMI	CAYNNNNRTG	3 cut(s)	314, 627, 668
SmlI	CTYRAG	3 cut(s)	434, 1136, 1976
SmoI	CTYRAG	3 cut(s)	434, 1136, 1976
SseBI	AGGCCT	1 cut(s)	57
SsiI	CCGC	8 cut(s)	86, 98, 120, 163, 265, 365, 819, 1252
SspDI	GGCGCC	1 cut(s)	781
SspI	AATATT	2 cut(s)	457, 502
SspMI	CTAG	3 cut(s)	480, 1755, 2066
SstI	GAGCTC	3 cut(s)	1250, 1890, 1977
StuI	AGGCCT	1 cut(s)	57
StyD4I	CCNGG	9 cut(s)	102, 147, 300, 520, 1123, 1225, 1596, 1792, 2080
StyI	CCWWGG	3 cut(s)	201, 875, 1318
TaaI	ACNGT	6 cut(s)	195, 374, 847, 888, 1014, 1219
TaiI	ACGT	1 cut(s)	1532
TaqI	TCGA	6 cut(s)	236, 324, 406, 1151, 1977, 2050
TaqII	GACCGA	2 cut(s)	36, 1854
TatI	WGTACW	4 cut(s)	585, 842, 1078, 1831
TauI	GCSGC	1 cut(s)	88
TfiI	GAWTC	6 cut(s)	256, 326, 439, 491, 1764, 1907
Tru1I	TTAA	6 cut(s)	435, 690, 983, 1137, 1364, 1452
Tru9I	TTAA	6 cut(s)	435, 690, 983, 1137, 1364, 1452
TscAI	CASTG	2 cut(s)	379, 1831
TseI	GCWGC	7 cut(s)	595, 1036, 1118, 1550, 1627, 1670, 1784
TspGWI	ACGGA	3 cut(s)	1319, 1451, 1643
TspRI	CASTG	2 cut(s)	379, 1831
Tth111I	GACNNNGTC	2 cut(s)	1313, 1841
Van91I	CCANNNNNTGG	1 cut(s)	1513
Vha464I	CTTAAG	2 cut(s)	434, 1136
VpaK11BI	GGWCC	4 cut(s)	160, 285, 1259, 1352
XapI	RAATTY	7 cut(s)	178, 551, 1231, 1334, 1523, 1854, 2040
XceI	RCATGY	2 cut(s)	1288, 1703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1401
XhoI	CTCGAG	1 cut(s)	1976
XmiI	GTMKAC	3 cut(s)	1009, 1163, 2050
XmnI	GAANNNNTTC	2 cut(s)	618, 792
XspI	CTAG	3 cut(s)	480, 1755, 2066
ZrmI	AGTACT	1 cut(s)	1080

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.