Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0008431

Physical Location & Seq

Genomic Coordinates Forward (+)

20411495 .. 20418882

Gene Structure 7388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g16490.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3027 bp

ATGGGGAAGAAGGTTAAGAGGAAGGCCAGAGCTCCTCAAAAGGAGAAGTGGGTTGCATCTGATTCCCCGAAGAAGGTTGCCGAACCAAGTGACCCGAGCATTGAGGATGATGGTGATGATGATGGAGTTTCAGTTGCAAAAGTGAGGAAACCTTGTCCTCACATTGACAAAGGTGTTGATTTGAATAAGTTGCATGCTAAAATTGGGTCTTCAGCAGCTGTTAGGTGTGAAGATTGTAGGGAAGGCGCCATTGATAGGAAGGGGGGTAAAGGCAAGGGAAAACATGCTAAGAAGAAAGGTGGTGCAGATTCTAAATCTGAATCAAAATCCGTTTGGCTTTGTCTAGAATGCGGTCATTTTGCTTGTGGTGGGGTTGGACTTCCAATAACCCCTCAATGCCACGCAATTCGGCATGCAAGGCAAACTCGTCACCCATTGGTGGTGCAGTTTGACAACCCACAGTTGCGGTGGTGCTTTCAGTGCAACACACTGATTACCATTGATAAGACGGGGGAGAATGGTGAAGAGAAAGATGTCTTTTCTGAAGTTGCGAAATTAATTAAGGGTCATTCGTCAGAGGACTCATCAGGTGATGTCGAGAGTGTATGGTTTGGTAGTGGCAGTGTGACAAGCGAAATCAAATCAGCCAGCAATACATCAAGCCTTTTCGATGGAAGAGGAGGTTATGTAGTAAGAGGCTTAGTTAACCTTGGTAACACTTGCTTCTTCAATTCTATTTTACAGAACCTTCTAGCTATTGATAGGTTGCGGTGTCACTTCTTAAATTTTGAAGCACCTGCTGGACCACTTACTATTTCCTTGAAGAAACTCTTTGCTGACACGAAACCAGAGGCAGGACTCAAGAATGTTATAAACCCCAGATCGTTTTTTGGGTGTATCTGTTCCAAGGCACCCCAGTTTAGGGGCTATCAGCAGCAAGACAGTCATGAATTGCTTCGTTGTTTACTTGATGGATTGTGCACTGAGGAGTTGAGTATGAGGAAACGTACAAGGCCTTCCCAAAATGGGGATCCATCAAATCCAGTTCCTACGTTTGTGGATGCTGTATTTGGAGGACAGATATCAAGTACTGTTCGCTGTGTTGAATGTGGTCACTCATCAACTGTCTATGAATCATTCTTAGATCTTTCACTACCAGTCCCAACCAGGAAATCTCCACCTAAGGCTTCCCAACCAAGCTCTCGAGCAAGGAAAACGAAGCTTCCACCCAAGAGGACTGGAAAGGTTCGATCAAAAATTAACAAAGACAAGAACCCTGTAGCATCTCCAAGTGTTGCAACCCCATCAACCAGCTGTGAGCATTCTAACCAGGTACAGTCAAGTTCTACTGACCTAAATGTTCCTGATCGTCCTACTGAGCTAAATATATCTGAACAAAGTACCAGCAGTGGCTTGGTTACGAAGAATCTATCAGCTGTCCAAGAATCTGAACATGAACAAGTCTTTGAGGATGCAGCAGTTTTGTTGAATGACTTTACATGGATGGATTATCTTGGTGACGGAAATATGTTAGATGACTGTGATTTGACTTCAGAAAATGCGATTGTTTCAATTGTTCAAGATCCTAAAAGTACCAATGCATCTCTTATTGATGTCTCACAACAGAGTGGCTCTGAAATCAGTGATAAGGATTCCAAGGTTACTGGAGTACAGGATGTAAAACCAAACTTTTCTTCAGTGAATTCAGTGGATGACGAGCTCCCATTACAAGTTCAAAGTTGTGAAATTTTATTGCTTCCATATAAAGAGGATCATAATTCTGAAGTTTTGTTGCTTCCACATAAGGAAAGATGTTCTATCACTGAGGAAAATGTGGGAGGAGAAGGAGAGGCATCGTCATCATTTGTGGGTTGTGGACAAGATGATTTTGATGGCTTTGGGGACTTATTCAATGAGCCTGAGGTTGTTGCTGGGCCCAGTCCAAGGCCCTCTACAGGGGAGGAAGGTACAACAATTAGTCTTGTAGTTAGTGAGTCTGATCCAGATGAAGTTGATGATACAAATTCTCCAGTCTCAGTAGAGAGTTGCTTGGCTCATTTCATAAAGCCTGAGCTTCTTGCCAATGAAAATGCTTGGCATTGTGAGAATTGTTCTAAATCTCTGCAGCGCCAAAGGTTGGAAGCAAAGAAGCGGCAAAAAGCAACAACTTATGGTTTGACAAATGGGTGTGAGACTAGAGTCCAAAGTGTTTCTTTGAGTTCAGACACTGCTGATATCAGTAATATTAGTAATGGAAATATTCAAAGCAATACTTGTTGCAACCATTCTGGTGAAAACTTGGTTTTGGTTGAAGGGAAGATGAATTGCTTGAGTGAAAATCGCACGTCAATTGAGAATGCTCCGTCAGATAAGATGATTCCTGTTTGTCAACAACAAGAAGGAAACAGTGAGATGAAAGATGTACTTCCAACAGAATCAAATACTTCAGATTCCAATAACAGTTGTACTCTAGAAATCAGTACTCAAGCCATTGATTCATGTGCTGATGAGCCTAGTAGTGCTGGATGTACCTCTGAAAATGCTTTACAGACAAATTCCAAGGTATTAGCTGATTGTGAATCAGAAGCAAGTGAAGACGAGGAAATAAATTCCAAACATGTGAAGGTGAAGAGGGATGCGACAAAACGGGTCCTAATTGGCAGGGCTCCACCTATCTTGACCATTCATCTAAAAAGGTTTAGCCAAGATGCTCGTGGTCGCTTAAGTAAATTGAACGGCCATGTGACATTCAGGGAAAAAATTGAGCTCAGACCATATATGGATTCCAGGTGCAGAGAAAAGGAGAATTATGAATACCACCTAATTGGGGTTGTGGAGCATTCTGGGACCATGAGAGGAGGCCACTATGTTGCATATGTGAGAGGTGGTGAAAGAAGCAAAGGGAAAACTGGGAATGAGAAGATTGGTCACGCGTGGTATTATGCTAGTGATGCACATGTACGTGAGGTTTCCCTGGAGGAGGTTCTCCACTGTGAGGCCTATATCTTATTCTATGAAAAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009987 GO:0019538 GO:0019941 GO:0030163 GO:0032991 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-UBP

Protein Analysis

1009

Amino Acids

110.03

Weight (kDa)

5.64

Isoelectric Point (pI)

50.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UBP	PF02148	107 - 166	1.7e-13	Zn-finger in ubiquitin-hydrolases and other protein
UCH	PF00443	232 - 928	4e-32	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04860
fragaria_vesca	FvH4_4g16490 FvH4_4g16490
malus_domestica	MD04G1009400.v1.1 MD13G1284700.v1.1
prunus_persica	Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1
pyrus_communis	pycom04g00720 pycom420g01370
rosa_chinensis	RchiOBHm_Chr4g0415171
rosa_laevigata	RLG00000008090
rosa_multiflora	Rmu_sc0003748.1_g000031 Rmu_sc0033472.1_g000001
rosa_roxburghii	Rroxscaffold_5G00359000
rosa_rugosa	Rorug04G0132500 Rorug04G0132500
rosa_samantha	Rh4AG192800 Rh4BG190900 Rh4CG203600 Rh4DG190700
rosa_wichuraiana	Rw4G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	872
AarI	CACCTGC	1 cut(s)	805
Acc36I	ACCTGC	1 cut(s)	805
AccB1I	GGYRCC	2 cut(s)	245, 910
AccB7I	CCANNNNNTGG	1 cut(s)	2137
AccII	CGCG	1 cut(s)	2933
AciI	CCGC	4 cut(s)	351, 466, 769, 2152
AclWI	GGATC	5 cut(s)	1025, 1038, 1577, 1779, 1994
AcoI	YGGCCR	1 cut(s)	2737
AcsI	RAATTY	6 cut(s)	784, 1702, 1746, 2023, 2554, 2608
AcuI	CTGAAG	6 cut(s)	195, 564, 1536, 1680, 1803, 2430
AcyI	GRCGYC	1 cut(s)	246
AflII	CTTAAG	1 cut(s)	2722
AflIII	ACRYGT	3 cut(s)	2617, 2931, 2956
AjiI	CACGTC	1 cut(s)	2346
AjnI	CCWGG	4 cut(s)	1166, 1329, 2786, 2973
AjuI	GAANNNNNNNTTGG	2 cut(s)	1678, 1710
Alw21I	GWGCWC	4 cut(s)	34, 983, 1722, 2769
Alw26I	GTCTC	3 cut(s)	1621, 2038, 2186
Alw44I	GTGCAC	1 cut(s)	979
AlwI	GGATC	5 cut(s)	1025, 1038, 1577, 1779, 1994
AlwNI	CAGNNNCTG	2 cut(s)	218, 2228
Ama87I	CYCGRG	2 cut(s)	94, 1203
AoxI	GGCC	7 cut(s)	24, 1013, 1934, 1946, 2737, 2860, 2997
ApaI	GGGCCC	1 cut(s)	1938
ApaLI	GTGCAC	1 cut(s)	979
ApeKI	GCWGC	4 cut(s)	215, 934, 1475, 2125
ApoI	RAATTY	6 cut(s)	784, 1702, 1746, 2023, 2554, 2608
AseI	ATTAAT	1 cut(s)	557
Asp700I	GAANNNNTTC	1 cut(s)	954
AspLEI	GCGC	2 cut(s)	248, 2130
AspS9I	GGNCC	6 cut(s)	803, 1934, 1935, 1947, 2650, 2847
AsuHPI	GGTGA	8 cut(s)	125, 422, 533, 602, 1529, 2303, 2638, 2900
AvaI	CYCGRG	2 cut(s)	94, 1203
AvaII	GGWCC	3 cut(s)	803, 2650, 2847
AxyI	CCTNAGG	2 cut(s)	1182, 1920
BaeGI	GKGCMC	2 cut(s)	983, 1938
BamHI	GGATCC	1 cut(s)	1030
BanI	GGYRCC	2 cut(s)	245, 910
BanII	GRGCYC	5 cut(s)	34, 1722, 1938, 2668, 2769
BarI	GAAGNNNNNNTAC	2 cut(s)	1000, 1032
BauI	CACGAG	1 cut(s)	2712
BbsI	GAAGAC	2 cut(s)	201, 2601
Bbv12I	GWGCWC	4 cut(s)	34, 983, 1722, 2769
BbvI	GCAGC	4 cut(s)	227, 946, 1487, 2137
BccI	CCATC	8 cut(s)	104, 116, 665, 965, 1042, 1312, 1498, 1886
BceAI	ACGGC	1 cut(s)	2752
BciT130I	CCWGG	4 cut(s)	1168, 1331, 2788, 2975
BcoDI	GTCTC	3 cut(s)	1621, 2038, 2186
BfaI	CTAG	6 cut(s)	344, 752, 2196, 2471, 2514, 2946
BfmI	CTRYAG	3 cut(s)	1278, 1953, 2123
BfoI	RGCGCY	2 cut(s)	249, 2131
BfrI	CTTAAG	1 cut(s)	2722
BfuAI	ACCTGC	1 cut(s)	805
BglII	AGATCT	1 cut(s)	1144
BisI	GCNGC	5 cut(s)	216, 935, 1476, 2126, 2153
BlsI	GCNGC	5 cut(s)	217, 936, 1477, 2127, 2154
BmcAI	AGTACT	2 cut(s)	1090, 2482
Bme1390I	CCNGG	4 cut(s)	1168, 1331, 2788, 2975
Bme18I	GGWCC	3 cut(s)	803, 2650, 2847
BmeT110I	CYCGRG	2 cut(s)	94, 1203
BmgBI	CACGTC	1 cut(s)	2346
BmgT120I	GGNCC	6 cut(s)	803, 1934, 1935, 1947, 2650, 2847
BmiI	GGNNCC	7 cut(s)	247, 912, 1032, 1936, 2651, 2667, 2848
BmrFI	CCNGG	4 cut(s)	1168, 1331, 2788, 2975
BmrI	ACTGGG	3 cut(s)	910, 1932, 2919
BmsI	GCATC	9 cut(s)	65, 1051, 1292, 1462, 1610, 1862, 2626, 2698, 2941
BmuI	ACTGGG	3 cut(s)	910, 1932, 2919
BoxI	GACNNNNGTC	1 cut(s)	2198
BpiI	GAAGAC	2 cut(s)	201, 2601
BpmI	CTGGAG	3 cut(s)	1686, 2013, 2996
Bpu10I	CCTNAGC	1 cut(s)	2070
BpuEI	CTTGAG	3 cut(s)	845, 2350, 2469
BsaAI	YACGTR	1 cut(s)	2963
BsaHI	GRCGYC	1 cut(s)	246
BsaJI	CCNNGG	6 cut(s)	709, 906, 1656, 1943, 2559, 2973
BsaXI	ACNNNNNCTCC	6 cut(s)	117, 147, 672, 702, 2011, 2041
Bse1I	ACTGG	8 cut(s)	916, 1043, 1157, 1243, 1669, 1938, 2030, 2914
Bse21I	CCTNAGG	2 cut(s)	1182, 1920
BseBI	CCWGG	4 cut(s)	1168, 1331, 2788, 2975
BseDI	CCNNGG	6 cut(s)	709, 906, 1656, 1943, 2559, 2973
BseGI	GGATG	8 cut(s)	112, 1066, 1477, 1509, 1681, 1717, 2531, 2641
BseMII	CTCAG	7 cut(s)	975, 1368, 1815, 1911, 2049, 2061, 2782
BseNI	ACTGG	8 cut(s)	916, 1043, 1157, 1243, 1669, 1938, 2030, 2914
BseRI	GAGGAG	6 cut(s)	24, 693, 1001, 1854, 2871, 2993
BseSI	GKGCMC	2 cut(s)	983, 1938
BseXI	GCAGC	4 cut(s)	227, 946, 1487, 2137
BseYI	CCCAGC	1 cut(s)	1931
BsgI	GTGCAG	3 cut(s)	324, 464, 2812
Bsh1236I	CGCG	1 cut(s)	2933
BshFI	GGCC	7 cut(s)	26, 1015, 1936, 1948, 2739, 2862, 2999
BshNI	GGYRCC	2 cut(s)	245, 910
BsiHKAI	GWGCWC	4 cut(s)	34, 983, 1722, 2769
BsiHKCI	CYCGRG	2 cut(s)	94, 1203
BslFI	GGGAC	3 cut(s)	1145, 1916, 2860
BsmAI	GTCTC	3 cut(s)	1621, 2038, 2186
BsmFI	GGGAC	3 cut(s)	1145, 1916, 2860
BsmI	GAATGC	4 cut(s)	353, 1321, 2362, 2839
BsnI	GGCC	7 cut(s)	26, 1015, 1936, 1948, 2739, 2862, 2999
BsoBI	CYCGRG	2 cut(s)	94, 1203
Bsp120I	GGGCCC	1 cut(s)	1934
Bsp1286I	GDGCHC	6 cut(s)	34, 983, 1722, 1938, 2668, 2769
Bsp143I	GATC	8 cut(s)	881, 1030, 1144, 1250, 1366, 1582, 1771, 1999
BspACI	CCGC	4 cut(s)	351, 466, 769, 2152
BspANI	GGCC	7 cut(s)	26, 1015, 1936, 1948, 2739, 2862, 2999
BspCNI	CTCAG	7 cut(s)	976, 1369, 1816, 1912, 2048, 2062, 2781
BspFNI	CGCG	1 cut(s)	2933
BspHI	TCATGA	1 cut(s)	946
BspLI	GGNNCC	7 cut(s)	247, 912, 1032, 1936, 2651, 2667, 2848
BspMAI	CTGCAG	1 cut(s)	2127
BspMI	ACCTGC	1 cut(s)	805
BspPI	GGATC	5 cut(s)	1025, 1038, 1577, 1779, 1994
BspT107I	GGYRCC	2 cut(s)	245, 910
BspTI	CTTAAG	1 cut(s)	2722
BsrI	ACTGG	8 cut(s)	916, 1043, 1157, 1243, 1669, 1938, 2030, 2914
BssECI	CCNNGG	6 cut(s)	709, 906, 1656, 1943, 2559, 2973
BssMI	GATC	8 cut(s)	881, 1030, 1144, 1250, 1366, 1582, 1771, 1999
BssNI	GRCGYC	1 cut(s)	246
BssSI	CACGAG	1 cut(s)	2712
BssT1I	CCWWGG	5 cut(s)	709, 906, 1656, 1943, 2559
Bst2BI	CACGAG	1 cut(s)	2712
Bst2UI	CCWGG	4 cut(s)	1168, 1331, 2788, 2975
Bst4CI	ACNGT	9 cut(s)	462, 944, 1093, 1126, 1338, 1541, 2408, 2462, 2993
Bst6I	CTCTTC	3 cut(s)	519, 670, 2624
BstACI	GRCGYC	1 cut(s)	246
BstAFI	CTTAAG	1 cut(s)	2722
BstBAI	YACGTR	1 cut(s)	2963
BstC8I	GCNNGC	3 cut(s)	195, 414, 649
BstENI	CCTNNNNNAGG	1 cut(s)	2978
BstF5I	GGATG	8 cut(s)	112, 1066, 1477, 1509, 1681, 1717, 2531, 2641
BstFNI	CGCG	1 cut(s)	2933
BstH2I	RGCGCY	2 cut(s)	249, 2131
BstHHI	GCGC	2 cut(s)	248, 2130
BstKTI	GATC	8 cut(s)	884, 1033, 1147, 1253, 1369, 1585, 1774, 2002
BstMAI	GTCTC	3 cut(s)	1621, 2038, 2186
BstMBI	GATC	8 cut(s)	881, 1030, 1144, 1250, 1366, 1582, 1771, 1999
BstMWI	GCNNNNNNNGC	3 cut(s)	418, 480, 2951
BstNI	CCWGG	4 cut(s)	1168, 1331, 2788, 2975
BstNSI	RCATGY	5 cut(s)	197, 287, 416, 2621, 2960
BstPAI	GACNNNNGTC	1 cut(s)	2198
BstSCI	CCNGG	4 cut(s)	1166, 1329, 2786, 2973
BstSFI	CTRYAG	3 cut(s)	1278, 1953, 2123
BstSLI	GKGCMC	2 cut(s)	983, 1938
BstUI	CGCG	1 cut(s)	2933
BstV1I	GCAGC	4 cut(s)	227, 946, 1487, 2137
BstV2I	GAAGAC	2 cut(s)	201, 2601
BstX2I	RGATCY	3 cut(s)	1030, 1144, 1582
BstXI	CCANNNNNNTGG	1 cut(s)	2825
BstYI	RGATCY	3 cut(s)	1030, 1144, 1582
Bsu36I	CCTNAGG	2 cut(s)	1182, 1920
BsuRI	GGCC	7 cut(s)	26, 1015, 1936, 1948, 2739, 2862, 2999
BtrI	CACGTC	1 cut(s)	2346
BtsCI	GGATG	8 cut(s)	112, 1066, 1477, 1509, 1681, 1717, 2531, 2641
BtsI	GCAGTG	3 cut(s)	628, 1414, 2226
BveI	ACCTGC	1 cut(s)	805
Cac8I	GCNNGC	3 cut(s)	195, 414, 649
CaiI	CAGNNNCTG	2 cut(s)	218, 2228
CciI	TCATGA	1 cut(s)	946
CfoI	GCGC	2 cut(s)	248, 2130
Cfr13I	GGNCC	6 cut(s)	803, 1934, 1935, 1947, 2650, 2847
CsiI	ACCWGGT	1 cut(s)	1329
CspCI	CAANNNNNGTGG	2 cut(s)	2658, 2693
DinI	GGCGCC	1 cut(s)	247
DpnI	GATC	8 cut(s)	883, 1032, 1146, 1252, 1368, 1584, 1773, 2001
DpnII	GATC	8 cut(s)	881, 1030, 1144, 1250, 1366, 1582, 1771, 1999
EaeI	YGGCCR	1 cut(s)	2737
Eam1104I	CTCTTC	3 cut(s)	519, 670, 2624
EarI	CTCTTC	3 cut(s)	519, 670, 2624
Ecl136II	GAGCTC	3 cut(s)	32, 1720, 2767
Eco130I	CCWWGG	5 cut(s)	709, 906, 1656, 1943, 2559
Eco147I	AGGCCT	2 cut(s)	1015, 2999
Eco24I	GRGCYC	5 cut(s)	34, 1722, 1938, 2668, 2769
Eco32I	GATATC	2 cut(s)	1083, 2236
Eco47I	GGWCC	3 cut(s)	803, 2650, 2847
Eco53kI	GAGCTC	3 cut(s)	32, 1720, 2767
Eco57I	CTGAAG	6 cut(s)	195, 564, 1536, 1680, 1803, 2430
Eco81I	CCTNAGG	2 cut(s)	1182, 1920
Eco88I	CYCGRG	2 cut(s)	94, 1203
EcoICRI	GAGCTC	3 cut(s)	32, 1720, 2767
EcoNI	CCTNNNNNAGG	1 cut(s)	2978
EcoO109I	RGGNCCY	2 cut(s)	1947, 2650
EcoRI	GAATTC	1 cut(s)	1702
EcoRII	CCWGG	4 cut(s)	1166, 1329, 2786, 2973
EcoRV	GATATC	2 cut(s)	1083, 2236
EcoT14I	CCWWGG	5 cut(s)	709, 906, 1656, 1943, 2559
EcoT22I	ATGCAT	1 cut(s)	1603
EcoT38I	GRGCYC	5 cut(s)	34, 1722, 1938, 2668, 2769
EgeI	GGCGCC	1 cut(s)	247
EheI	GGCGCC	1 cut(s)	247
ErhI	CCWWGG	5 cut(s)	709, 906, 1656, 1943, 2559
FalI	AAGNNNNNCTT	8 cut(s)	815, 847, 2197, 2229, 2257, 2289, 2409, 2441
FaqI	GGGAC	3 cut(s)	1145, 1916, 2860
FauNDI	CATATG	1 cut(s)	2875
Fnu4HI	GCNGC	5 cut(s)	216, 935, 1476, 2126, 2153
FokI	GGATG	8 cut(s)	119, 1073, 1484, 1516, 1688, 1724, 2538, 2648
FriOI	GRGCYC	5 cut(s)	34, 1722, 1938, 2668, 2769
Fsp4HI	GCNGC	5 cut(s)	216, 935, 1476, 2126, 2153
FspBI	CTAG	6 cut(s)	344, 752, 2196, 2471, 2514, 2946
GlaI	GCGC	2 cut(s)	247, 2129
GluI	GCNGC	5 cut(s)	216, 935, 1476, 2126, 2153
GsaI	CCCAGC	1 cut(s)	1935
GsuI	CTGGAG	3 cut(s)	1686, 2013, 2996
HaeII	RGCGCY	2 cut(s)	249, 2131
HaeIII	GGCC	7 cut(s)	26, 1015, 1936, 1948, 2739, 2862, 2999
HhaI	GCGC	2 cut(s)	248, 2130
Hin1I	GRCGYC	1 cut(s)	246
Hin6I	GCGC	2 cut(s)	246, 2128
HinP1I	GCGC	2 cut(s)	246, 2128
HincII	GTYRAC	2 cut(s)	706, 2390
HindII	GTYRAC	2 cut(s)	706, 2390
HindIII	AAGCTT	1 cut(s)	1220
HpaI	GTTAAC	1 cut(s)	706
HphI	GGTGA	8 cut(s)	125, 422, 533, 602, 1529, 2303, 2638, 2900
Hpy166II	GTNNAC	5 cut(s)	706, 965, 981, 1877, 2390
Hpy8I	GTNNAC	5 cut(s)	706, 965, 981, 1877, 2390
HpyCH4III	ACNGT	9 cut(s)	462, 944, 1093, 1126, 1338, 1541, 2408, 2462, 2993
HpyCH4IV	ACGT	4 cut(s)	1006, 1052, 2345, 2962
HpyF10VI	GCNNNNNNNGC	3 cut(s)	418, 480, 2951
HpySE526I	ACGT	4 cut(s)	1006, 1052, 2345, 2962
Hsp92I	GRCGYC	1 cut(s)	246
HspAI	GCGC	2 cut(s)	246, 2128
KasI	GGCGCC	1 cut(s)	245
KspAI	GTTAAC	1 cut(s)	706
Kzo9I	GATC	8 cut(s)	881, 1030, 1144, 1250, 1366, 1582, 1771, 1999
LmnI	GCTCC	5 cut(s)	37, 1725, 2365, 2671, 2836
Lsp1109I	GCAGC	4 cut(s)	227, 946, 1487, 2137
LweI	GCATC	9 cut(s)	65, 1051, 1292, 1462, 1610, 1862, 2626, 2698, 2941
MabI	ACCWGGT	1 cut(s)	1329
MaeI	CTAG	6 cut(s)	344, 752, 2196, 2471, 2514, 2946
MaeII	ACGT	4 cut(s)	1006, 1052, 2345, 2962
MalI	GATC	8 cut(s)	883, 1032, 1146, 1252, 1368, 1584, 1773, 2001
MboI	GATC	8 cut(s)	881, 1030, 1144, 1250, 1366, 1582, 1771, 1999
MfeI	CAATTG	2 cut(s)	1572, 2349
MflI	RGATCY	3 cut(s)	1030, 1144, 1582
MhlI	GDGCHC	6 cut(s)	34, 983, 1722, 1938, 2668, 2769
MluI	ACGCGT	1 cut(s)	2931
Mly113I	GGCGCC	1 cut(s)	246
MlyI	GAGTC	4 cut(s)	575, 852, 2003, 2208
MmeI	TCCRAC	3 cut(s)	355, 2118, 2453
Mph1103I	ATGCAT	1 cut(s)	1603
MroXI	GAANNNNTTC	1 cut(s)	954
MseI	TTAA	7 cut(s)	15, 557, 561, 705, 782, 1260, 2723
MslI	CAYNNNNRTG	2 cut(s)	2289, 2961
MspA1I	CMGCKG	3 cut(s)	218, 1314, 1436
MspCI	CTTAAG	1 cut(s)	2722
MspR9I	CCNGG	4 cut(s)	1168, 1331, 2788, 2975
MunI	CAATTG	2 cut(s)	1572, 2349
Mva1269I	GAATGC	4 cut(s)	353, 1321, 2362, 2839
MvaI	CCWGG	4 cut(s)	1168, 1331, 2788, 2975
MvnI	CGCG	1 cut(s)	2933
MwoI	GCNNNNNNNGC	3 cut(s)	418, 480, 2951
NarI	GGCGCC	1 cut(s)	246
NdeI	CATATG	1 cut(s)	2875
NdeII	GATC	8 cut(s)	881, 1030, 1144, 1250, 1366, 1582, 1771, 1999
NlaIV	GGNNCC	7 cut(s)	247, 912, 1032, 1936, 2651, 2667, 2848
NmuCI	GTSAC	8 cut(s)	89, 428, 625, 773, 1112, 1517, 2743, 2927
NsiI	ATGCAT	1 cut(s)	1603
NspI	RCATGY	5 cut(s)	197, 287, 416, 2621, 2960
PacI	TTAATTAA	1 cut(s)	561
PaeI	GCATGC	2 cut(s)	197, 416
PaeR7I	CTCGAG	1 cut(s)	1203
PagI	TCATGA	1 cut(s)	946
PaqCI	CACCTGC	1 cut(s)	805
PceI	AGGCCT	2 cut(s)	1015, 2999
PciI	ACATGT	2 cut(s)	2617, 2956
PctI	GAATGC	4 cut(s)	353, 1321, 2362, 2839
PdmI	GAANNNNTTC	1 cut(s)	954
PflMI	CCANNNNNTGG	1 cut(s)	2137
PkrI	GCNGC	5 cut(s)	217, 936, 1477, 2127, 2154
PleI	GAGTC	4 cut(s)	575, 852, 2002, 2207
PluTI	GGCGCC	1 cut(s)	249
PpsI	GAGTC	4 cut(s)	575, 852, 2002, 2207
Ppu21I	YACGTR	1 cut(s)	2963
PpuMI	RGGWCCY	1 cut(s)	2650
PscI	ACATGT	2 cut(s)	2617, 2956
PshAI	GACNNNNGTC	1 cut(s)	2198
PshBI	ATTAAT	1 cut(s)	557
PsiI	TTATAA	1 cut(s)	872
Psp124BI	GAGCTC	3 cut(s)	34, 1722, 2769
Psp5II	RGGWCCY	1 cut(s)	2650
Psp6I	CCWGG	4 cut(s)	1166, 1329, 2786, 2973
PspFI	CCCAGC	1 cut(s)	1931
PspGI	CCWGG	4 cut(s)	1166, 1329, 2786, 2973
PspN4I	GGNNCC	7 cut(s)	247, 912, 1032, 1936, 2651, 2667, 2848
PspOMI	GGGCCC	1 cut(s)	1934
PspPI	GGNCC	6 cut(s)	803, 1934, 1935, 1947, 2650, 2847
PspPPI	RGGWCCY	1 cut(s)	2650
PstI	CTGCAG	1 cut(s)	2127
PstNI	CAGNNNCTG	2 cut(s)	218, 2228
PsuI	RGATCY	3 cut(s)	1030, 1144, 1582
PvuII	CAGCTG	3 cut(s)	218, 1314, 1436
RseI	CAYNNNNRTG	2 cut(s)	2289, 2961
SacI	GAGCTC	3 cut(s)	34, 1722, 2769
SaqAI	TTAA	7 cut(s)	15, 557, 561, 705, 782, 1260, 2723
SatI	GCNGC	5 cut(s)	216, 935, 1476, 2126, 2153
Sau3AI	GATC	8 cut(s)	881, 1030, 1144, 1250, 1366, 1582, 1771, 1999
Sau96I	GGNCC	6 cut(s)	803, 1934, 1935, 1947, 2650, 2847
ScaI	AGTACT	2 cut(s)	1090, 2482
SchI	GAGTC	4 cut(s)	575, 852, 2003, 2208
ScrFI	CCNGG	4 cut(s)	1168, 1331, 2788, 2975
SduI	GDGCHC	6 cut(s)	34, 983, 1722, 1938, 2668, 2769
SexAI	ACCWGGT	1 cut(s)	1329
SfaNI	GCATC	9 cut(s)	65, 1051, 1292, 1462, 1610, 1862, 2626, 2698, 2941
SfcI	CTRYAG	3 cut(s)	1278, 1953, 2123
SfoI	GGCGCC	1 cut(s)	247
Sfr274I	CTCGAG	1 cut(s)	1203
SinI	GGWCC	3 cut(s)	803, 2650, 2847
SlaI	CTCGAG	1 cut(s)	1203
SmiMI	CAYNNNNRTG	2 cut(s)	2289, 2961
SmlI	CTYRAG	5 cut(s)	860, 1203, 2329, 2484, 2722
SmoI	CTYRAG	5 cut(s)	860, 1203, 2329, 2484, 2722
SphI	GCATGC	2 cut(s)	197, 416
SseBI	AGGCCT	2 cut(s)	1015, 2999
SsiI	CCGC	4 cut(s)	351, 466, 769, 2152
SspDI	GGCGCC	1 cut(s)	245
SspI	AATATT	2 cut(s)	2245, 2260
SspMI	CTAG	6 cut(s)	344, 752, 2196, 2471, 2514, 2946
SstI	GAGCTC	3 cut(s)	34, 1722, 2769
StuI	AGGCCT	2 cut(s)	1015, 2999
StyD4I	CCNGG	4 cut(s)	1166, 1329, 2786, 2973
StyI	CCWWGG	5 cut(s)	709, 906, 1656, 1943, 2559
TaaI	ACNGT	9 cut(s)	462, 944, 1093, 1126, 1338, 1541, 2408, 2462, 2993
TaiI	ACGT	4 cut(s)	1009, 1055, 2348, 2965
TaqI	TCGA	4 cut(s)	597, 669, 1204, 1249
TatI	WGTACW	5 cut(s)	1088, 1669, 2422, 2465, 2480
TauI	GCSGC	1 cut(s)	2155
Tru1I	TTAA	7 cut(s)	15, 557, 561, 705, 782, 1260, 2723
Tru9I	TTAA	7 cut(s)	15, 557, 561, 705, 782, 1260, 2723
TseFI	GTSAC	8 cut(s)	89, 428, 625, 773, 1112, 1517, 2743, 2927
TseI	GCWGC	4 cut(s)	215, 934, 1475, 2125
Tsp45I	GTSAC	8 cut(s)	89, 428, 625, 773, 1112, 1517, 2743, 2927
TspGWI	ACGGA	3 cut(s)	319, 1536, 2352
Van91I	CCANNNNNTGG	1 cut(s)	2137
Vha464I	CTTAAG	1 cut(s)	2722
VneI	GTGCAC	1 cut(s)	979
VpaK11BI	GGWCC	3 cut(s)	803, 2650, 2847
VspI	ATTAAT	1 cut(s)	557
XagI	CCTNNNNNAGG	1 cut(s)	2978
XapI	RAATTY	6 cut(s)	784, 1702, 1746, 2023, 2554, 2608
XbaI	TCTAGA	2 cut(s)	343, 2470
XceI	RCATGY	5 cut(s)	197, 287, 416, 2621, 2960
XcmI	CCANNNNNNNNNTGG	3 cut(s)	465, 1411, 2711
XhoI	CTCGAG	1 cut(s)	1203
XmnI	GAANNNNTTC	1 cut(s)	954
XspI	CTAG	6 cut(s)	344, 752, 2196, 2471, 2514, 2946
ZrmI	AGTACT	2 cut(s)	1090, 2482
Zsp2I	ATGCAT	1 cut(s)	1603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.