Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0008431

Physical Location & Seq

Genomic Coordinates Forward (+)

684183 .. 688525

Gene Structure 4343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g00720.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3012 bp

ATGGGGAAGAAAGTTAAGAAGAAGGCTAGAGCTCCTCCAAGGGAGAAGTTGGTTGCAGCCGATTCCCCCAAAAAAGTCCCCCAACCAAGCAACCCAAGTGTTAAGGACGGTGATGATGGGGTTTCAGTTGCGAAAGAGAGAAGGCCTTGTCCTCATGTTGAAAAAGGTGTTGATTTGGATAAATTGTCAGCTAAAATTGGGTCTTCAGGACCTGTTAGGTGTGAAGATTGCAGGGAAGGAGCGCTTGATAGGAGGGGTGGTAAGGGAAAGGGAAAACATGGGAAGAAGAAAGGAAGTTCCTCAGTGGATTCAAAATCGGAGTCCAAAGCCATTTGGGTTTGTTTGGAGTGTGGTCATTATTCTTGTGGCGGGATTGGGCTTCCTACAACCCCTCAGTGTCATGCAGTTCGGCATGCCAGGCAGACTCGTCACCCAATTGTGATCCACTTTGAAAAGCCACAGATGTGGTGGTGCTTCCCGTGCAACATGCTTGTTACAATTGAAAAGACGGAAGAGGATGGTGAACAAAAAGATGTGTTTGCGGATGTTGTGAAATTGATAAAGGGTCATTCATCGGAGGGATCATCGGTTAATGCTGAGGATATGTGGTTTGCAAGTGGCAGTGTGACAAGCGAAATCAAATCAGCTAGCAACATATCATGTGGTTTGGATGGAAGAGGTGGTTATATGGTTAGAGGCTTGGTTAATCTTGGTAACACTTGCTTCTTTAATTCTGTCTTACAGAACCTTCTAGCCATAGATAAGTTGCGGGGTTACTTCTTAAATTTAGATGCATCTACTGGAGCTCTTACTGTTTCATTGAAGAAACTCTTTACTGAAGCAAAACCAGAGGCAGGACTTAAGAATGTGATAAACCCAAGGTCACTTTTTGGTTGTGTTTGTTCCAAGGCTCCCCAATTTAGGGGATATCAGCAGCAAGACAGTCATGAATTGCTTCGTTGCTTACTGGATGGATTGTGCACTGAGGAGTTGAGTATGAGGAAACGTATAAATTCTTCTCAGGAAAATGGGAATCCATCAAACTCAGGTCCTACTTTTGTGGATGCTACATTTGGGGGCCAAACATCAAGTACTGTTTGCTGTGTTGAATGTGGTCACTCCTCAACTGTGTACGAGTCATTTTTAGATCTGTCATTGTCAGTTCCAACCAGAAAATCCCCATCTAAGGCTGCCCAACCCATCTCTCGAGCAAAGAAGACGAAGTTGCCGCCTAAGAGGAGTGGAAAGCTTCGGCCTAAAAATAACAAAGAGAAGAATTCTGTACCATCACCAAGTGTTCCAACGCCATCAACCAGCGGTGAGGTTTCTGACCATTCTGACCAGCCACAGTCTAGGTCAACCGACCCAAATGTGGCTGAACAAAAGGAATTAGTTGTAAATAGTCTATCTGCTGTCCAAGAATCTCCAAATGAACAAGTCTGTGAGGATGCAGCAGAGCAAACATCAACTTTGTTGGATGATTGTTCAGGGTTGGATTATCTTGATTCAGGAAATATGTTAGATGACAATGAAGTCTGTGAGGATGCAGCAGAGCAAACATTAACTTTGTTGGATGACTGTTCATGGTTGGATTATCTTGATTCGGGAAATATGTTAGATGACAATGATTTCTCTTCACAAAATAATGATGTCTCAATTGTTCAAGATTCCGAAAACAAGAGTTCACATCTTAATGATGTCTTTCTACAGAGTGGCTCTGAATCTAGTAATCAGGTTTTTACGCTTAATAAGGAACCCAATGTAGAACCTGACCGTTCTTCAGTGAATTCTTGGGAGGAAGAGCTCCCATTACAGGTTCAGGATTCTGAAGTTTTGTTGCTTCCATATAAAGCAGAGTGTTCTACCACCGAGGAAATCATGGGAGGCGAAGGTGAGGCCTCCTCATCGGTTGTGGGTTGTGGACAAGATGACTTTGGCTTTGGGGACTTATTCAACGAACCTGAAGTTTATGGGCCCCCTACAAGACCCTCTGTAGGTGAGGGAGGCACAGACACTAGTATCATAGCTAGTGAGTCTGATCCTGATGAAGTTGATGATACTGATTCTCCAGTGTCTGTAGAGAGTTGTTTGTCTCATTTCATAAAGCCCGAGCTTCTTGCCAATGAAAATGCTTGGCATTGTGAGAACTGTTCCAAAATTCTTCAACGCCAAAGGTTGGAAGAAAAGAAGCAGGTAAAATCTGCTGCTAAAGTTTTGTTAAATGGATGTGAGGCTAGAACACAAGGTGACTCACTGAGTTTAAATACGGGTCCTGCTGATGTCAGAAGGCTTGGTAATGGGAATGTCAAAAGCAATACTGGTTGTAATCAGTTTGGTGAAAACTTCGTTTTGCACGATGGAAAAATAAATTGCTTGAACCAAAATTGCTCAGCAATTGAGAATGGTCAATCAGATAAGTCGAATTCTGTTGTTTGTCAACAACAAGATGAGATGGAAGATGCTCCTCCAGTGCATGATTCTAGGGCTGATGAGTCTAGAAGTGCTAGTTTCACCTGTGACATTGTACCACAGACTAATTATGGGATATTGGATGGACATCGTGAATCAGAAGAAAGTGAGGATGAGGAAGTAAATTCCAAACTTGTGAATGTGAAGAGGAATGCGACTAAAAGGTACCTCATCAACAGGGCCCCACCTATTTTGACTATTCATCTTAAGAGGTTCAGCCAAGATACTCGTGGTCGCTTGAGTAAATCGAATGGCCATATCAGTTTCGGAGAAAAAATTGATCTTAGGCCATATATGGATTCCAGGTGCATAGATGGGGAAAAGTATGAATACCAGCTACTTGGGGTTGTGGAGCATTCTGGAACCATGAGAGGGGGCCACTATGTTGCATACGTGAGAGGGGGCGAAAGGAGCAGAGGAAAAACTGAGAGAGAAAATATTGGTCATGGGTGGTATTATGCTAGCGATGCACATGTGCGTCAGGTTTCCCTAGATGACGTTCTTCGCTCTGAGGCCTATATCTTATTCTATGAAAAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009987 GO:0019538 GO:0019941 GO:0030163 GO:0032991 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-UBP

Protein Analysis

1004

Amino Acids

109.74

Weight (kDa)

5.26

Isoelectric Point (pI)

50.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04860
fragaria_vesca	FvH4_4g16490 FvH4_4g16490
malus_domestica	MD04G1009400.v1.1 MD13G1284700.v1.1
prunus_persica	Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1
pyrus_communis	pycom04g00720 pycom420g01370
rosa_chinensis	RchiOBHm_Chr4g0415171
rosa_laevigata	RLG00000008090
rosa_multiflora	Rmu_sc0003748.1_g000031 Rmu_sc0033472.1_g000001
rosa_roxburghii	Rroxscaffold_5G00359000
rosa_rugosa	Rorug04G0132500 Rorug04G0132500
rosa_samantha	Rh4AG192800 Rh4BG190900 Rh4CG203600 Rh4DG190700
rosa_wichuraiana	Rw4G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1532
Acc36I	ACCTGC	1 cut(s)	2182
Acc65I	GGTACC	1 cut(s)	2634
AccB1I	GGYRCC	1 cut(s)	2634
AccB7I	CCANNNNNTGG	1 cut(s)	2176
AciI	CCGC	5 cut(s)	369, 542, 769, 1229, 1317
AclWI	GGATC	3 cut(s)	436, 589, 2033
AcoI	YGGCCR	1 cut(s)	2722
AcsI	RAATTY	7 cut(s)	784, 1012, 1276, 1786, 2157, 2422, 2593
AcuI	CTGAAG	5 cut(s)	189, 858, 1764, 1848, 1983
AdeI	CACNNNGTG	2 cut(s)	1295, 2246
AfaI	GTAC	5 cut(s)	1093, 1133, 1284, 2526, 2636
AfeI	AGCGCT	1 cut(s)	243
AfiI	CCNNNNNNNGG	9 cut(s)	854, 921, 922, 1186, 1372, 1813, 1994, 2176, 2841
AflII	CTTAAG	2 cut(s)	860, 2675
AflIII	ACRYGT	1 cut(s)	2941
AhlI	ACTAGT	1 cut(s)	2015
AjnI	CCWGG	2 cut(s)	416, 2771
AleI	CACNNNNGTG	1 cut(s)	463
AluBI	AGCT	9 cut(s)	32, 191, 647, 806, 1249, 1804, 2027, 2113, 2806
AluI	AGCT	9 cut(s)	32, 191, 647, 806, 1249, 1804, 2027, 2113, 2806
Alw21I	GWGCWC	4 cut(s)	34, 808, 983, 1806
Alw26I	GTCTC	2 cut(s)	1657, 2097
Alw44I	GTGCAC	1 cut(s)	979
AlwI	GGATC	3 cut(s)	436, 589, 2033
AlwNI	CAGNNNCTG	2 cut(s)	212, 2075
Ama87I	CYCGRG	2 cut(s)	1206, 2108
Aor51HI	AGCGCT	1 cut(s)	243
ApaI	GGGCCC	2 cut(s)	1977, 2653
ApaLI	GTGCAC	1 cut(s)	979
ApeKI	GCWGC	6 cut(s)	56, 934, 1190, 1451, 1547, 2204
ApoI	RAATTY	7 cut(s)	784, 1012, 1276, 1786, 2157, 2422, 2593
ArsI	GACNNNNNNTTYG	4 cut(s)	305, 337, 1922, 1954
Asp700I	GAANNNNTTC	1 cut(s)	954
Asp718I	GGTACC	1 cut(s)	2634
AspLEI	GCGC	1 cut(s)	244
AspS9I	GGNCC	9 cut(s)	209, 1049, 1078, 1973, 1974, 2270, 2649, 2650, 2845
AsuNHI	GCTAGC	2 cut(s)	647, 2930
AvaI	CYCGRG	2 cut(s)	1206, 2108
AvaII	GGWCC	3 cut(s)	209, 1049, 2270
BaeGI	GKGCMC	3 cut(s)	983, 1977, 2653
BaeI	ACNNNNGTAYC	2 cut(s)	2002, 2035
BalI	TGGCCA	1 cut(s)	2724
BanI	GGYRCC	1 cut(s)	2634
BanII	GRGCYC	5 cut(s)	34, 808, 1806, 1977, 2653
BarI	GAAGNNNNNNTAC	2 cut(s)	1000, 1032
BauI	CACGAG	1 cut(s)	2697
BbsI	GAAGAC	2 cut(s)	195, 1223
Bbv12I	GWGCWC	4 cut(s)	34, 808, 983, 1806
BbvCI	CCTCAGC	1 cut(s)	597
BbvI	GCAGC	6 cut(s)	68, 946, 1177, 1463, 1559, 2191
BcgI	CGANNNNNNTGC	2 cut(s)	2099, 2133
BciT130I	CCWGG	2 cut(s)	418, 2773
BcoDI	GTCTC	2 cut(s)	1657, 2097
BcuI	ACTAGT	1 cut(s)	2015
BfmI	CTRYAG	3 cut(s)	1706, 1992, 2076
BfoI	RGCGCY	1 cut(s)	245
BfrI	CTTAAG	2 cut(s)	860, 2675
BfuAI	ACCTGC	1 cut(s)	2182
BglII	AGATCT	1 cut(s)	1147
BisI	GCNGC	7 cut(s)	57, 935, 1191, 1229, 1452, 1548, 2205
BlpI	GCTNAGC	1 cut(s)	2389
BlsI	GCNGC	7 cut(s)	58, 936, 1192, 1230, 1453, 1549, 2206
BmcAI	AGTACT	1 cut(s)	1093
Bme1390I	CCNGG	2 cut(s)	418, 2773
Bme18I	GGWCC	3 cut(s)	209, 1049, 2270
BmeT110I	CYCGRG	2 cut(s)	1206, 2108
BmgT120I	GGNCC	9 cut(s)	209, 1049, 1078, 1973, 1974, 2270, 2649, 2650, 2845
BmrFI	CCNGG	2 cut(s)	418, 2773
BmsI	GCATC	7 cut(s)	781, 803, 1054, 1438, 1534, 2449, 2926
BmtI	GCTAGC	2 cut(s)	651, 2934
BpiI	GAAGAC	2 cut(s)	195, 1223
BplI	GAGNNNNNCTC	2 cut(s)	1886, 1918
BpmI	CTGGAG	3 cut(s)	822, 2052, 2451
Bpu10I	CCTNAGC	1 cut(s)	597
Bpu1102I	GCTNAGC	1 cut(s)	2389
BpuEI	CTTGAG	1 cut(s)	2728
BsaAI	YACGTR	1 cut(s)	2863
BsaBI	GATNNNNATC	1 cut(s)	2556
BsaJI	CCNNGG	4 cut(s)	38, 878, 906, 1869
BsaXI	ACNNNNNCTCC	4 cut(s)	244, 274, 2050, 2080
Bsc4I	CCNNNNNNNGG	9 cut(s)	854, 921, 922, 1186, 1372, 1813, 1994, 2176, 2841
Bse1I	ACTGG	5 cut(s)	805, 972, 2069, 2323, 2468
Bse8I	GATNNNNATC	1 cut(s)	2556
BseBI	CCWGG	2 cut(s)	418, 2773
BseDI	CCNNGG	4 cut(s)	38, 878, 906, 1869
BseJI	GATNNNNATC	1 cut(s)	2556
BseLI	CCNNNNNNNGG	9 cut(s)	854, 921, 922, 1186, 1372, 1813, 1994, 2176, 2841
BseNI	ACTGG	5 cut(s)	805, 972, 2069, 2323, 2468
BseRI	GAGGAG	6 cut(s)	24, 1001, 1111, 1252, 1891, 2454
BseSI	GKGCMC	3 cut(s)	983, 1977, 2653
BseXI	GCAGC	6 cut(s)	68, 946, 1177, 1463, 1559, 2191
BshNI	GGYRCC	1 cut(s)	2634
BsiHKAI	GWGCWC	4 cut(s)	34, 808, 983, 1806
BsiHKCI	CYCGRG	2 cut(s)	1206, 2108
BslFI	GGGAC	2 cut(s)	62, 1958
BslI	CCNNNNNNNGG	9 cut(s)	854, 921, 922, 1186, 1372, 1813, 1994, 2176, 2841
BsmAI	GTCTC	2 cut(s)	1657, 2097
BsmFI	GGGAC	2 cut(s)	62, 1958
BsmI	GAATGC	2 cut(s)	2626, 2824
BsoBI	CYCGRG	2 cut(s)	1206, 2108
Bsp120I	GGGCCC	2 cut(s)	1973, 2649
Bsp1286I	GDGCHC	6 cut(s)	34, 808, 983, 1806, 1977, 2653
Bsp143I	GATC	5 cut(s)	441, 581, 1147, 2038, 2749
Bsp1720I	GCTNAGC	1 cut(s)	2389
BspACI	CCGC	5 cut(s)	369, 542, 769, 1229, 1317
BspHI	TCATGA	1 cut(s)	946
BspMI	ACCTGC	1 cut(s)	2182
BspOI	GCTAGC	2 cut(s)	651, 2934
BspPI	GGATC	3 cut(s)	436, 589, 2033
BspQI	GCTCTTC	1 cut(s)	1794
BspT107I	GGYRCC	1 cut(s)	2634
BspTI	CTTAAG	2 cut(s)	860, 2675
BsrI	ACTGG	5 cut(s)	805, 972, 2069, 2323, 2468
BssECI	CCNNGG	4 cut(s)	38, 878, 906, 1869
BssMI	GATC	5 cut(s)	441, 581, 1147, 2038, 2749
BssSI	CACGAG	1 cut(s)	2697
BssT1I	CCWWGG	3 cut(s)	38, 878, 906
Bst2BI	CACGAG	1 cut(s)	2697
Bst2UI	CCWGG	2 cut(s)	418, 2773
Bst4CI	ACNGT	9 cut(s)	110, 814, 944, 1096, 1129, 1350, 1580, 1775, 2150
Bst6I	CTCTTC	5 cut(s)	507, 670, 1639, 1794, 2609
BstAFI	CTTAAG	2 cut(s)	860, 2675
BstBAI	YACGTR	1 cut(s)	2863
BstC8I	GCNNGC	3 cut(s)	414, 649, 2932
BstH2I	RGCGCY	1 cut(s)	245
BstHHI	GCGC	1 cut(s)	244
BstKTI	GATC	5 cut(s)	444, 584, 1150, 2041, 2752
BstMAI	GTCTC	2 cut(s)	1657, 2097
BstMBI	GATC	5 cut(s)	441, 581, 1147, 2038, 2749
BstMWI	GCNNNNNNNGC	4 cut(s)	418, 480, 2880, 2936
BstNI	CCWGG	2 cut(s)	418, 2773
BstNSI	RCATGY	3 cut(s)	416, 490, 2945
BstSCI	CCNGG	2 cut(s)	416, 2771
BstSFI	CTRYAG	3 cut(s)	1706, 1992, 2076
BstSLI	GKGCMC	3 cut(s)	983, 1977, 2653
BstV1I	GCAGC	6 cut(s)	68, 946, 1177, 1463, 1559, 2191
BstV2I	GAAGAC	2 cut(s)	195, 1223
BstX2I	RGATCY	1 cut(s)	1147
BstXI	CCANNNNNNTGG	2 cut(s)	465, 2810
BstYI	RGATCY	1 cut(s)	1147
BtgZI	GCGATG	1 cut(s)	2949
BtsI	GCAGTG	1 cut(s)	628
BtsIMutI	CAGTG	8 cut(s)	309, 401, 628, 981, 1788, 2076, 2252, 2475
BveI	ACCTGC	1 cut(s)	2182
Cac8I	GCNNGC	3 cut(s)	414, 649, 2932
CaiI	CAGNNNCTG	2 cut(s)	212, 2075
CciI	TCATGA	1 cut(s)	946
CfoI	GCGC	1 cut(s)	244
Cfr13I	GGNCC	9 cut(s)	209, 1049, 1078, 1973, 1974, 2270, 2649, 2650, 2845
CseI	GACGC	1 cut(s)	2936
Csp6I	GTAC	5 cut(s)	1092, 1132, 1283, 2525, 2635
CspCI	CAANNNNNGTGG	2 cut(s)	2643, 2678
CviQI	GTAC	5 cut(s)	1092, 1132, 1283, 2525, 2635
DpnI	GATC	5 cut(s)	443, 583, 1149, 2040, 2751
DpnII	GATC	5 cut(s)	441, 581, 1147, 2038, 2749
DraI	TTTAAA	1 cut(s)	2262
DraIII	CACNNNGTG	2 cut(s)	1295, 2246
DrdI	GACNNNNNNGTC	1 cut(s)	1532
DseDI	GACNNNNNNGTC	1 cut(s)	1532
EaeI	YGGCCR	1 cut(s)	2722
Eam1104I	CTCTTC	5 cut(s)	507, 670, 1639, 1794, 2609
EarI	CTCTTC	5 cut(s)	507, 670, 1639, 1794, 2609
Ecl136II	GAGCTC	3 cut(s)	32, 806, 1804
Eco130I	CCWWGG	3 cut(s)	38, 878, 906
Eco147I	AGGCCT	3 cut(s)	145, 1898, 2984
Eco24I	GRGCYC	5 cut(s)	34, 808, 1806, 1977, 2653
Eco32I	GATATC	1 cut(s)	929
Eco47I	GGWCC	3 cut(s)	209, 1049, 2270
Eco47III	AGCGCT	1 cut(s)	243
Eco53kI	GAGCTC	3 cut(s)	32, 806, 1804
Eco57I	CTGAAG	5 cut(s)	189, 858, 1764, 1848, 1983
Eco88I	CYCGRG	2 cut(s)	1206, 2108
EcoICRI	GAGCTC	3 cut(s)	32, 806, 1804
EcoO109I	RGGNCCY	6 cut(s)	209, 1049, 1974, 2270, 2649, 2650
EcoRI	GAATTC	3 cut(s)	1276, 1786, 2422
EcoRII	CCWGG	2 cut(s)	416, 2771
EcoRV	GATATC	1 cut(s)	929
EcoT14I	CCWWGG	3 cut(s)	38, 878, 906
EcoT22I	ATGCAT	1 cut(s)	796
EcoT38I	GRGCYC	5 cut(s)	34, 808, 1806, 1977, 2653
ErhI	CCWWGG	3 cut(s)	38, 878, 906
FalI	AAGNNNNNCTT	4 cut(s)	228, 260, 815, 847
FaqI	GGGAC	2 cut(s)	62, 1958
FauI	CCCGC	2 cut(s)	362, 762
Fnu4HI	GCNGC	7 cut(s)	57, 935, 1191, 1229, 1452, 1548, 2205
FriOI	GRGCYC	5 cut(s)	34, 808, 1806, 1977, 2653
Fsp4HI	GCNGC	7 cut(s)	57, 935, 1191, 1229, 1452, 1548, 2205
GlaI	GCGC	1 cut(s)	243
GluI	GCNGC	7 cut(s)	57, 935, 1191, 1229, 1452, 1548, 2205
GsuI	CTGGAG	3 cut(s)	822, 2052, 2451
HaeII	RGCGCY	1 cut(s)	245
HgaI	GACGC	1 cut(s)	2936
HhaI	GCGC	1 cut(s)	244
Hin6I	GCGC	1 cut(s)	242
HinP1I	GCGC	1 cut(s)	242
HincII	GTYRAC	2 cut(s)	1359, 2438
HindII	GTYRAC	2 cut(s)	1359, 2438
HindIII	AAGCTT	1 cut(s)	1247
Hpy166II	GTNNAC	7 cut(s)	524, 981, 1132, 1359, 1685, 1922, 2438
Hpy8I	GTNNAC	7 cut(s)	524, 981, 1132, 1359, 1685, 1922, 2438
HpyAV	CCTTC	6 cut(s)	16, 135, 230, 758, 1883, 2280
HpyCH4III	ACNGT	9 cut(s)	110, 814, 944, 1096, 1129, 1350, 1580, 1775, 2150
HpyCH4IV	ACGT	3 cut(s)	1006, 2862, 2967
HpyF10VI	GCNNNNNNNGC	4 cut(s)	418, 480, 2880, 2936
HpySE526I	ACGT	3 cut(s)	1006, 2862, 2967
HspAI	GCGC	1 cut(s)	242
KpnI	GGTACC	1 cut(s)	2638
Kzo9I	GATC	5 cut(s)	441, 581, 1147, 2038, 2749
LguI	GCTCTTC	1 cut(s)	1794
LmnI	GCTCC	8 cut(s)	37, 239, 803, 916, 1809, 2467, 2821, 2880
Lsp1109I	GCAGC	6 cut(s)	68, 946, 1177, 1463, 1559, 2191
LweI	GCATC	7 cut(s)	781, 803, 1054, 1438, 1534, 2449, 2926
MaeII	ACGT	3 cut(s)	1006, 2862, 2967
MaeIII	GTNAC	9 cut(s)	428, 493, 625, 713, 773, 882, 1115, 2246, 2516
MalI	GATC	5 cut(s)	443, 583, 1149, 2040, 2751
MboI	GATC	5 cut(s)	441, 581, 1147, 2038, 2749
MfeI	CAATTG	4 cut(s)	435, 498, 1656, 2394
MflI	RGATCY	1 cut(s)	1147
MhlI	GDGCHC	6 cut(s)	34, 808, 983, 1806, 1977, 2653
MlsI	TGGCCA	1 cut(s)	2724
MluNI	TGGCCA	1 cut(s)	2724
MlyI	GAGTC	6 cut(s)	329, 418, 1145, 2042, 2243, 2501
MmeI	TCCRAC	7 cut(s)	1190, 1325, 1455, 1473, 1551, 1569, 2157
Mox20I	TGGCCA	1 cut(s)	2724
Mph1103I	ATGCAT	1 cut(s)	796
MroXI	GAANNNNTTC	1 cut(s)	954
MscI	TGGCCA	1 cut(s)	2724
MslI	CAYNNNNRTG	2 cut(s)	463, 1692
Msp20I	TGGCCA	1 cut(s)	2724
MspA1I	CMGCKG	1 cut(s)	1317
MspCI	CTTAAG	2 cut(s)	860, 2675
MspR9I	CCNGG	2 cut(s)	418, 2773
MunI	CAATTG	4 cut(s)	435, 498, 1656, 2394
Mva1269I	GAATGC	2 cut(s)	2626, 2824
MvaI	CCWGG	2 cut(s)	418, 2773
MwoI	GCNNNNNNNGC	4 cut(s)	418, 480, 2880, 2936
NdeII	GATC	5 cut(s)	441, 581, 1147, 2038, 2749
NheI	GCTAGC	2 cut(s)	647, 2930
NmuCI	GTSAC	6 cut(s)	428, 625, 882, 1115, 2246, 2516
NsiI	ATGCAT	1 cut(s)	796
NspI	RCATGY	3 cut(s)	416, 490, 2945
OliI	CACNNNNGTG	1 cut(s)	463
PaeI	GCATGC	1 cut(s)	416
PaeR7I	CTCGAG	1 cut(s)	1206
PagI	TCATGA	1 cut(s)	946
PceI	AGGCCT	3 cut(s)	145, 1898, 2984
PciI	ACATGT	1 cut(s)	2941
PciSI	GCTCTTC	1 cut(s)	1794
PcsI	WCGNNNNNNNCGW	1 cut(s)	2352
PctI	GAATGC	2 cut(s)	2626, 2824
PdmI	GAANNNNTTC	1 cut(s)	954
PflMI	CCANNNNNTGG	1 cut(s)	2176
PkrI	GCNGC	7 cut(s)	58, 936, 1192, 1230, 1453, 1549, 2206
PleI	GAGTC	6 cut(s)	328, 418, 1144, 2041, 2243, 2500
PpsI	GAGTC	6 cut(s)	328, 418, 1144, 2041, 2243, 2500
Ppu21I	YACGTR	1 cut(s)	2863
PpuMI	RGGWCCY	3 cut(s)	209, 1049, 2270
PscI	ACATGT	1 cut(s)	2941
Psp124BI	GAGCTC	3 cut(s)	34, 808, 1806
Psp5II	RGGWCCY	3 cut(s)	209, 1049, 2270
Psp6I	CCWGG	2 cut(s)	416, 2771
PspGI	CCWGG	2 cut(s)	416, 2771
PspOMI	GGGCCC	2 cut(s)	1973, 2649
PspPI	GGNCC	9 cut(s)	209, 1049, 1078, 1973, 1974, 2270, 2649, 2650, 2845
PspPPI	RGGWCCY	3 cut(s)	209, 1049, 2270
PstNI	CAGNNNCTG	2 cut(s)	212, 2075
PsuI	RGATCY	1 cut(s)	1147
RsaI	GTAC	5 cut(s)	1093, 1133, 1284, 2526, 2636
RsaNI	GTAC	5 cut(s)	1092, 1132, 1283, 2525, 2635
RseI	CAYNNNNRTG	2 cut(s)	463, 1692
SacI	GAGCTC	3 cut(s)	34, 808, 1806
SapI	GCTCTTC	1 cut(s)	1794
SatI	GCNGC	7 cut(s)	57, 935, 1191, 1229, 1452, 1548, 2205
Sau3AI	GATC	5 cut(s)	441, 581, 1147, 2038, 2749
Sau96I	GGNCC	9 cut(s)	209, 1049, 1078, 1973, 1974, 2270, 2649, 2650, 2845
ScaI	AGTACT	1 cut(s)	1093
SchI	GAGTC	6 cut(s)	329, 418, 1145, 2042, 2243, 2501
ScrFI	CCNGG	2 cut(s)	418, 2773
SduI	GDGCHC	6 cut(s)	34, 808, 983, 1806, 1977, 2653
SfaNI	GCATC	7 cut(s)	781, 803, 1054, 1438, 1534, 2449, 2926
SfcI	CTRYAG	3 cut(s)	1706, 1992, 2076
Sfr274I	CTCGAG	1 cut(s)	1206
SinI	GGWCC	3 cut(s)	209, 1049, 2270
SlaI	CTCGAG	1 cut(s)	1206
SmiMI	CAYNNNNRTG	2 cut(s)	463, 1692
SmlI	CTYRAG	4 cut(s)	860, 1206, 2675, 2707
SmoI	CTYRAG	4 cut(s)	860, 1206, 2675, 2707
SpeI	ACTAGT	1 cut(s)	2015
SphI	GCATGC	1 cut(s)	416
SseBI	AGGCCT	3 cut(s)	145, 1898, 2984
SsiI	CCGC	5 cut(s)	369, 542, 769, 1229, 1317
SspI	AATATT	1 cut(s)	2908
SstI	GAGCTC	3 cut(s)	34, 808, 1806
StuI	AGGCCT	3 cut(s)	145, 1898, 2984
StyD4I	CCNGG	2 cut(s)	416, 2771
StyI	CCWWGG	3 cut(s)	38, 878, 906
TaaI	ACNGT	9 cut(s)	110, 814, 944, 1096, 1129, 1350, 1580, 1775, 2150
TaiI	ACGT	3 cut(s)	1009, 2865, 2970
TaqI	TCGA	3 cut(s)	1207, 2420, 2717
TatI	WGTACW	1 cut(s)	1091
TauI	GCSGC	1 cut(s)	1231
TscAI	CASTG	8 cut(s)	309, 401, 628, 988, 1788, 2076, 2259, 2475
TseFI	GTSAC	6 cut(s)	428, 625, 882, 1115, 2246, 2516
TseI	GCWGC	6 cut(s)	56, 934, 1190, 1451, 1547, 2204
Tsp45I	GTSAC	6 cut(s)	428, 625, 882, 1115, 2246, 2516
TspGWI	ACGGA	1 cut(s)	524
TspRI	CASTG	8 cut(s)	309, 401, 628, 988, 1788, 2076, 2259, 2475
Van91I	CCANNNNNTGG	1 cut(s)	2176
Vha464I	CTTAAG	2 cut(s)	860, 2675
VneI	GTGCAC	1 cut(s)	979
VpaK11BI	GGWCC	3 cut(s)	209, 1049, 2270
XapI	RAATTY	7 cut(s)	784, 1012, 1276, 1786, 2157, 2422, 2593
XbaI	TCTAGA	1 cut(s)	2495
XceI	RCATGY	3 cut(s)	416, 490, 2945
XcmI	CCANNNNNNNNNTGG	2 cut(s)	465, 2696
XhoI	CTCGAG	1 cut(s)	1206
XmnI	GAANNNNTTC	1 cut(s)	954
ZrmI	AGTACT	1 cut(s)	1093
Zsp2I	ATGCAT	1 cut(s)	796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.