Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0008431

Physical Location & Seq

Genomic Coordinates Reverse (-)

33066459 .. 33073302

Gene Structure 6844 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG190900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2820 bp

ATGGGGAAGAAGGTTAAGAAGAAGGCTAGAGCTCCTCAAAAGGAGAAGTGGGTTCCATCTGATTCCCCGAAGAAGGTTGCCGAACAAAGCGACCCAAGCGTTAAGGATGATGGTGATGATGGAGTTTCAGTTGCAAAAGTGAGAAAAGCTTGTCCTCACATTGACAAAGGCGTTGATTTGAATAAATTGCAAGCTAAAATTGGGTCTTCAGCAGTTATTAGGTGTGAAGATTGTAGGGAAGGTGCCATTGATAGGAAGGGGGGTAAAGGAAAGGGCAAACATGGTAAGAAGAAAGGAGGTGCTGATTCTAAATCCGAGTCAAAATCTGTATGGCTTTGTTTAGAATGCGGTCATTATGCTTGTGGTGGGGTTGGACTTCCAATAACCCCTCAGTGCCACGCAGTTCGGCATGCAAGGCAAACTCGTCACCCATTGGTGGTGCAGTATGAAAACCCACAGTTGCGATGGTGCTTCCAGTGCAGCACACTTATTACCATTGATAAGACAGGGGAGAATGGTGAAGAAAAAGATGTCTTTTCTGATGTTGTGAAATTAATTAAGGGTCATTCGTCGGAGGACTCATCAGGTGATGTCGAGGATGTATGGTTTGGTAGTGGCAGTGTGACAAGCGAAATCAAATCAGCTAGCAATACATCAAGCCTTTTGGATGGAAGAGGAGGTTATGCAGTAAGAGGCTTAGTTAATCTTGGTAACACTTGCTTCTTCAATTCTATTTTACAGAACCTTCTAGCTATTGATAGGTTGCGGGTTTACTTCTTAAATTTTGAAGCACCTGCCGGACCGCTTACTATTTCCTTGAAGAAACTCTATACTGAAACAAAACCAGAGGCAGGATTCAAGAATGTGATAAACCCTAGATCGTTTTTCGGTTGTGTCTGTTCCAAGGCTCCCCAGTTTAGGGGCTATCAGCAGCAAGACAGTCATGAATTGCTTCGTTGCTTACTGGATGGATTGTGTACTGAGGAGTTGAGTATGAGGAAACTTACAAGTTCTTCCCAGCAAAATGAGGATTCATCAAATCCAGTTCCTACGTTTGTTGATGCTGTATTTGGGGGACAGGTATCAAGTACTGTTCGCTGTGTTGAATGTGGTCACTCATCAACTATCTATGAGTCATTCTTAGATCTGTCACTGCCAGTCCCAACCAGGAAATCCCCACCTAAGGCTTCCCTACCAAGCTCTCGAGCAAAGAAGACGAAGCTTCCACCCAAGAGGAGTGGAAAGGTTCGATCTAAAATTAACAAAGACAAGAACTCTGCAACATCTCCAAGTGTGGCAACCACATCAACCAGCGGTGAGCTCTCTAACCAGGTACAGTCAAGTTCTACTGAGCTAAATGTACCTGAACAAAACGGCTTGGTTATGAAGAATCTATCAGCTGTCCAAGAATCTCAACATGAACAAGTCTTTGAGAATGCAGCAGGAGAACAAGCATCAGCTTTAGATGACTTTACATGGATGGATTATCTTGATGACGGAAATATATTAGATGACTATGATTTGACTTCAGAAAATGCTATTGTTTCAATTGTTCAAGATCCTAAAAGTATTAATACATCTCTTAATGATGTCTCACAACAGAGTGGCTCTGAGATCAGTGATAAGGATTTCAAGGTTACTGGAGAACAGAATGTAAAACCAAACTTTTCTTCAGTGAATGCTGAGGAGGTCGAGCTCCCATTGCAGGTTCAAAGTTCTGAAATTTTATTGCTTCCATATAAAGAAGATCAGAGTTCTGAAATGTTGTTGCTTCCACATAAGGAAGGATGTTCCATCACTAGTGAAATCATGGGAGGAGAAGGAGAGGCATCGTCATCAACTGTGGGTTGTGGACAAGATGATTTTGATGGCTTTGGAGACTTATTCAATGAGCCTGAGCCTGAGGTTGTTGCTGGGCCCAGTCCAAGGCCCTCTACTGGTGAGGAAGGTACAGCAACTAGTCTTGTAGCTAGTGAGTCTGATCCTGATGAAGTTGATGATACAAATTCTCCAGTCTCTGTAGAGAGTTGTTTAGCTCATTTCATAAAGCCTGAGCTTCTTGCCAATGAAAATGCTTGGCATTGTGAGAACTGTTCCAAATCTCTGAAGCGCCAAAGGTTGGAAGCAAAGAAGCGGCAAAAAGCTGCAACTAAATGTTTGATAAATGGATGTGAGACTAGAGTCCAAAGTGTTTCTCTTAGTTCAGACACTGCTGATATCAGTAATATTAGTAATGGAAATATCAAAAGCAATACTGGTTGCAACCAATTTGCTGAAAACCTGGTTTTGGATGATGGGAAGATGAATTGCTCGAGCGAAAATTGCACATCAATTGAGAATGCTCTATCAGATAAGATGATTCCTGTTGTTTGTCAACAACAAGAAGGAAACAGTGAGATGAAAGATGTACTTCCAACAGAATCAAATACTTTGGATTGCAATAACAGTGATACTCTAGAAAGTATTAGCAGTCAAGCCATTGATACATGTGCTGATGTGCCTAGTTGTGCTGGATGTGCCTCTGAAAATGCTCCACAGACAAATTCTAAATTATTAGATGATTGTGAATTAGAAGCAAGCGAAGATGAGGAAATAAATTCCAAACATGTGAAGGTGAAGAGGGATGCGACAAAACGGGTCCTAATTGACAGGGCCCCGCCTATTTTGACCATTCATCTCAAAAGGTTTAGCCAAGATGCTCGTGGTCGCTTAAGTAAATTGAACGGCCATGTCACTTTCAGAGAAAAAATTGAGCTCAGACCATATATGGATTCCAGGTATCTATCTGACCTTTTTACAAAGTTCATTTCAGATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009987 GO:0019538 GO:0019941 GO:0030163 GO:0032991 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-UBP

Protein Analysis

939

Amino Acids

102.13

Weight (kDa)

5.25

Isoelectric Point (pI)

50.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UBP	PF02148	106 - 165	3.1e-13	Zn-finger in ubiquitin-hydrolases and other protein
UCH	PF00443	231 - 407	1.2e-24	Ubiquitin carboxyl-terminal hydrolase
UCH	PF00443	704 - 925	1.5e-09	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04860
fragaria_vesca	FvH4_4g16490 FvH4_4g16490
malus_domestica	MD04G1009400.v1.1 MD13G1284700.v1.1
prunus_persica	Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1
pyrus_communis	pycom04g00720 pycom420g01370
rosa_chinensis	RchiOBHm_Chr4g0415171
rosa_laevigata	RLG00000008090
rosa_multiflora	Rmu_sc0003748.1_g000031 Rmu_sc0033472.1_g000001
rosa_roxburghii	Rroxscaffold_5G00359000
rosa_rugosa	Rorug04G0132500 Rorug04G0132500
rosa_samantha	Rh4AG192800 Rh4BG190900 Rh4CG203600 Rh4DG190700
rosa_wichuraiana	Rw4G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	802
Acc36I	ACCTGC	2 cut(s)	802, 1696
AccB1I	GGYRCC	1 cut(s)	242
AccB7I	CCANNNNNTGG	1 cut(s)	2119
AciI	CCGC	6 cut(s)	348, 766, 803, 1314, 2134, 2657
AclWI	GGATC	2 cut(s)	1553, 1976
AcoI	YGGCCR	1 cut(s)	2725
AcsI	RAATTY	5 cut(s)	781, 1722, 2005, 2542, 2596
AcuI	CTGAAG	4 cut(s)	192, 1512, 1656, 2126
AfaI	GTAC	6 cut(s)	979, 1090, 1335, 1362, 1951, 2409
AflII	CTTAAG	1 cut(s)	2710
AflIII	ACRYGT	2 cut(s)	2486, 2605
AhlI	ACTAGT	2 cut(s)	1799, 1958
AjnI	CCWGG	4 cut(s)	1166, 1329, 2280, 2774
AjuI	GAANNNNNNNTTGG	2 cut(s)	1654, 1686
Alw21I	GWGCWC	4 cut(s)	34, 1323, 1698, 2757
Alw26I	GTCTC	4 cut(s)	1597, 1872, 2020, 2168
AlwI	GGATC	2 cut(s)	1553, 1976
AlwNI	CAGNNNCTG	2 cut(s)	2018, 2210
Ama87I	CYCGRG	2 cut(s)	1203, 2311
AoxI	GGCC	4 cut(s)	1916, 1928, 2652, 2725
ApaI	GGGCCC	2 cut(s)	1920, 2656
ApeKI	GCWGC	4 cut(s)	480, 931, 1439, 2144
ApoI	RAATTY	5 cut(s)	781, 1722, 2005, 2542, 2596
AseI	ATTAAT	2 cut(s)	554, 1572
Asp700I	GAANNNNTTC	1 cut(s)	951
AspLEI	GCGC	1 cut(s)	2112
AspS9I	GGNCC	7 cut(s)	800, 1916, 1917, 1929, 2638, 2652, 2653
AsuHPI	GGTGA	7 cut(s)	125, 419, 530, 599, 1328, 1952, 2626
AsuNHI	GCTAGC	1 cut(s)	644
AvaI	CYCGRG	2 cut(s)	1203, 2311
AvaII	GGWCC	2 cut(s)	800, 2638
AxyI	CCTNAGG	2 cut(s)	1182, 1902
BaeGI	GKGCMC	2 cut(s)	1920, 2656
BanI	GGYRCC	1 cut(s)	242
BanII	GRGCYC	6 cut(s)	34, 1323, 1698, 1920, 2656, 2757
BauI	CACGAG	1 cut(s)	2700
BbsI	GAAGAC	2 cut(s)	198, 1220
Bbv12I	GWGCWC	4 cut(s)	34, 1323, 1698, 2757
BbvCI	CCTCAGC	1 cut(s)	1683
BbvI	GCAGC	4 cut(s)	492, 943, 1451, 2131
BceAI	ACGGC	2 cut(s)	1390, 2740
BciT130I	CCWGG	4 cut(s)	1168, 1331, 2282, 2776
BcoDI	GTCTC	4 cut(s)	1597, 1872, 2020, 2168
BcuI	ACTAGT	2 cut(s)	1799, 1958
BfmI	CTRYAG	1 cut(s)	2019
BfoI	RGCGCY	1 cut(s)	2113
BfrI	CTTAAG	1 cut(s)	2710
BfuAI	ACCTGC	2 cut(s)	802, 1696
BglII	AGATCT	1 cut(s)	1144
BisI	GCNGC	5 cut(s)	481, 932, 1440, 2135, 2145
BlsI	GCNGC	5 cut(s)	482, 933, 1441, 2136, 2146
BmcAI	AGTACT	1 cut(s)	1090
Bme1390I	CCNGG	4 cut(s)	1168, 1331, 2282, 2776
Bme18I	GGWCC	2 cut(s)	800, 2638
BmeT110I	CYCGRG	2 cut(s)	1203, 2311
BmgT120I	GGNCC	7 cut(s)	800, 1916, 1917, 1929, 2638, 2652, 2653
BmiI	GGNNCC	7 cut(s)	54, 244, 909, 1918, 2639, 2654, 2655
BmrFI	CCNGG	4 cut(s)	1168, 1331, 2282, 2776
BmrI	ACTGGG	2 cut(s)	907, 1914
BmsI	GCATC	5 cut(s)	1051, 1463, 1838, 2614, 2686
BmtI	GCTAGC	1 cut(s)	648
BmuI	ACTGGG	2 cut(s)	907, 1914
BoxI	GACNNNNGTC	1 cut(s)	2180
BpiI	GAAGAC	2 cut(s)	198, 1220
BpmI	CTGGAG	2 cut(s)	1662, 1995
Bpu10I	CCTNAGC	3 cut(s)	1683, 1896, 2052
BsaJI	CCNNGG	2 cut(s)	903, 1925
BsaXI	ACNNNNNCTCC	4 cut(s)	114, 144, 1993, 2023
Bse21I	CCTNAGG	2 cut(s)	1182, 1902
Bse3DI	GCAATG	1 cut(s)	1700
BseBI	CCWGG	4 cut(s)	1168, 1331, 2282, 2776
BseDI	CCNNGG	2 cut(s)	903, 1925
BseMI	GCAATG	1 cut(s)	1700
BseMII	CTCAG	9 cut(s)	404, 972, 1341, 1602, 1674, 1887, 1893, 2043, 2770
BseRI	GAGGAG	6 cut(s)	24, 690, 998, 1249, 1700, 1830
BseSI	GKGCMC	2 cut(s)	1920, 2656
BseXI	GCAGC	4 cut(s)	492, 943, 1451, 2131
BseYI	CCCAGC	2 cut(s)	1017, 1913
BsgI	GTGCAG	2 cut(s)	461, 499
BshFI	GGCC	4 cut(s)	1918, 1930, 2654, 2727
BshNI	GGYRCC	1 cut(s)	242
BsiHKAI	GWGCWC	4 cut(s)	34, 1323, 1698, 2757
BsiHKCI	CYCGRG	2 cut(s)	1203, 2311
BsiSI	CCGG	1 cut(s)	798
BslFI	GGGAC	2 cut(s)	1089, 1145
BsmAI	GTCTC	4 cut(s)	1597, 1872, 2020, 2168
BsmFI	GGGAC	2 cut(s)	1089, 1145
BsmI	GAATGC	4 cut(s)	350, 1441, 1684, 2344
BsnI	GGCC	4 cut(s)	1918, 1930, 2654, 2727
BsoBI	CYCGRG	2 cut(s)	1203, 2311
Bsp120I	GGGCCC	2 cut(s)	1916, 2652
Bsp1286I	GDGCHC	6 cut(s)	34, 1323, 1698, 1920, 2656, 2757
Bsp143I	GATC	7 cut(s)	878, 1144, 1250, 1558, 1614, 1747, 1981
BspACI	CCGC	6 cut(s)	348, 766, 803, 1314, 2134, 2657
BspANI	GGCC	4 cut(s)	1918, 1930, 2654, 2727
BspCNI	CTCAG	9 cut(s)	403, 973, 1342, 1603, 1675, 1888, 1894, 2044, 2769
BspHI	TCATGA	1 cut(s)	943
BspLI	GGNNCC	7 cut(s)	54, 244, 909, 1918, 2639, 2654, 2655
BspMI	ACCTGC	2 cut(s)	802, 1696
BspOI	GCTAGC	1 cut(s)	648
BspPI	GGATC	2 cut(s)	1553, 1976
BspT107I	GGYRCC	1 cut(s)	242
BspTI	CTTAAG	1 cut(s)	2710
BsrDI	GCAATG	1 cut(s)	1700
BssECI	CCNNGG	2 cut(s)	903, 1925
BssMI	GATC	7 cut(s)	878, 1144, 1250, 1558, 1614, 1747, 1981
BssSI	CACGAG	1 cut(s)	2700
BssT1I	CCWWGG	2 cut(s)	903, 1925
Bst2BI	CACGAG	1 cut(s)	2700
Bst2UI	CCWGG	4 cut(s)	1168, 1331, 2282, 2776
Bst4CI	ACNGT	8 cut(s)	459, 941, 1093, 1338, 1843, 2093, 2393, 2447
Bst6I	CTCTTC	2 cut(s)	667, 2612
BstAFI	CTTAAG	1 cut(s)	2710
BstC8I	GCNNGC	4 cut(s)	192, 411, 646, 2578
BstH2I	RGCGCY	1 cut(s)	2113
BstHHI	GCGC	1 cut(s)	2112
BstKTI	GATC	7 cut(s)	881, 1147, 1253, 1561, 1617, 1750, 1984
BstMAI	GTCTC	4 cut(s)	1597, 1872, 2020, 2168
BstMBI	GATC	7 cut(s)	878, 1144, 1250, 1558, 1614, 1747, 1981
BstMWI	GCNNNNNNNGC	6 cut(s)	96, 415, 477, 1702, 2322, 2516
BstNI	CCWGG	4 cut(s)	1168, 1331, 2282, 2776
BstNSI	RCATGY	3 cut(s)	413, 2490, 2609
BstPAI	GACNNNNGTC	1 cut(s)	2180
BstSCI	CCNGG	4 cut(s)	1166, 1329, 2280, 2774
BstSFI	CTRYAG	1 cut(s)	2019
BstSLI	GKGCMC	2 cut(s)	1920, 2656
BstV1I	GCAGC	4 cut(s)	492, 943, 1451, 2131
BstV2I	GAAGAC	2 cut(s)	198, 1220
BstX2I	RGATCY	2 cut(s)	1144, 1558
BstYI	RGATCY	2 cut(s)	1144, 1558
Bsu36I	CCTNAGG	2 cut(s)	1182, 1902
BsuRI	GGCC	4 cut(s)	1918, 1930, 2654, 2727
BtgZI	GCGATG	1 cut(s)	478
BtsI	GCAGTG	3 cut(s)	625, 1151, 2208
BtsIMutI	CAGTG	9 cut(s)	398, 482, 625, 1151, 1624, 1680, 2208, 2398, 2452
BveI	ACCTGC	2 cut(s)	802, 1696
Cac8I	GCNNGC	4 cut(s)	192, 411, 646, 2578
CaiI	CAGNNNCTG	2 cut(s)	2018, 2210
CciI	TCATGA	1 cut(s)	943
CfoI	GCGC	1 cut(s)	2112
Cfr13I	GGNCC	7 cut(s)	800, 1916, 1917, 1929, 2638, 2652, 2653
CpoI	CGGWCCG	1 cut(s)	800
CsiI	ACCWGGT	2 cut(s)	1329, 2280
Csp6I	GTAC	6 cut(s)	978, 1089, 1334, 1361, 1950, 2408
CspCI	CAANNNNNGTGG	2 cut(s)	1219, 1254
CspI	CGGWCCG	1 cut(s)	800
CviAII	CATG	9 cut(s)	281, 410, 944, 1418, 1476, 1810, 2487, 2606, 2729
CviQI	GTAC	6 cut(s)	978, 1089, 1334, 1361, 1950, 2408
DpnI	GATC	7 cut(s)	880, 1146, 1252, 1560, 1616, 1749, 1983
DpnII	GATC	7 cut(s)	878, 1144, 1250, 1558, 1614, 1747, 1981
EaeI	YGGCCR	1 cut(s)	2725
Eam1104I	CTCTTC	2 cut(s)	667, 2612
EarI	CTCTTC	2 cut(s)	667, 2612
Ecl136II	GAGCTC	4 cut(s)	32, 1321, 1696, 2755
Eco130I	CCWWGG	2 cut(s)	903, 1925
Eco24I	GRGCYC	6 cut(s)	34, 1323, 1698, 1920, 2656, 2757
Eco32I	GATATC	1 cut(s)	2218
Eco47I	GGWCC	2 cut(s)	800, 2638
Eco53kI	GAGCTC	4 cut(s)	32, 1321, 1696, 2755
Eco57I	CTGAAG	4 cut(s)	192, 1512, 1656, 2126
Eco81I	CCTNAGG	2 cut(s)	1182, 1902
Eco88I	CYCGRG	2 cut(s)	1203, 2311
EcoICRI	GAGCTC	4 cut(s)	32, 1321, 1696, 2755
EcoO109I	RGGNCCY	4 cut(s)	1929, 2638, 2652, 2653
EcoRII	CCWGG	4 cut(s)	1166, 1329, 2280, 2774
EcoRV	GATATC	1 cut(s)	2218
EcoT14I	CCWWGG	2 cut(s)	903, 1925
EcoT38I	GRGCYC	6 cut(s)	34, 1323, 1698, 1920, 2656, 2757
ErhI	CCWWGG	2 cut(s)	903, 1925
FaeI	CATG	9 cut(s)	284, 413, 947, 1421, 1479, 1813, 2490, 2609, 2732
FalI	AAGNNNNNCTT	2 cut(s)	2394, 2426
FaqI	GGGAC	2 cut(s)	1089, 1145
FatI	CATG	9 cut(s)	280, 409, 943, 1417, 1475, 1809, 2486, 2605, 2728
FauI	CCCGC	2 cut(s)	759, 2664
Fnu4HI	GCNGC	5 cut(s)	481, 932, 1440, 2135, 2145
FriOI	GRGCYC	6 cut(s)	34, 1323, 1698, 1920, 2656, 2757
Fsp4HI	GCNGC	5 cut(s)	481, 932, 1440, 2135, 2145
GlaI	GCGC	1 cut(s)	2111
GluI	GCNGC	5 cut(s)	481, 932, 1440, 2135, 2145
GsaI	CCCAGC	2 cut(s)	1021, 1917
GsuI	CTGGAG	2 cut(s)	1662, 1995
HaeII	RGCGCY	1 cut(s)	2113
HaeIII	GGCC	4 cut(s)	1918, 1930, 2654, 2727
HapII	CCGG	1 cut(s)	798
HhaI	GCGC	1 cut(s)	2112
Hin1II	CATG	9 cut(s)	284, 413, 947, 1421, 1479, 1813, 2490, 2609, 2732
Hin6I	GCGC	1 cut(s)	2110
HinP1I	GCGC	1 cut(s)	2110
HincII	GTYRAC	1 cut(s)	2375
HindII	GTYRAC	1 cut(s)	2375
HindIII	AAGCTT	2 cut(s)	147, 1220
HpaII	CCGG	1 cut(s)	798
HphI	GGTGA	7 cut(s)	125, 419, 530, 599, 1328, 1952, 2626
Hpy166II	GTNNAC	4 cut(s)	772, 978, 1853, 2375
Hpy188III	TCNNGA	7 cut(s)	859, 944, 1203, 1490, 1556, 1985, 2456
Hpy8I	GTNNAC	4 cut(s)	772, 978, 1853, 2375
Hpy99I	CGWCG	1 cut(s)	574
HpyCH4III	ACNGT	8 cut(s)	459, 941, 1093, 1338, 1843, 2093, 2393, 2447
HpyCH4IV	ACGT	1 cut(s)	1052
HpyF10VI	GCNNNNNNNGC	6 cut(s)	96, 415, 477, 1702, 2322, 2516
HpySE526I	ACGT	1 cut(s)	1052
Hsp92II	CATG	9 cut(s)	284, 413, 947, 1421, 1479, 1813, 2490, 2609, 2732
HspAI	GCGC	1 cut(s)	2110
Kzo9I	GATC	7 cut(s)	878, 1144, 1250, 1558, 1614, 1747, 1981
LmnI	GCTCC	4 cut(s)	37, 913, 1701, 2536
Lsp1109I	GCAGC	4 cut(s)	492, 943, 1451, 2131
LweI	GCATC	5 cut(s)	1051, 1463, 1838, 2614, 2686
MabI	ACCWGGT	2 cut(s)	1329, 2280
MaeII	ACGT	1 cut(s)	1052
MaeIII	GTNAC	7 cut(s)	425, 622, 710, 1112, 1149, 1636, 2731
MalI	GATC	7 cut(s)	880, 1146, 1252, 1560, 1616, 1749, 1983
MboI	GATC	7 cut(s)	878, 1144, 1250, 1558, 1614, 1747, 1981
MfeI	CAATTG	2 cut(s)	1548, 2331
MflI	RGATCY	2 cut(s)	1144, 1558
MhlI	GDGCHC	6 cut(s)	34, 1323, 1698, 1920, 2656, 2757
MlyI	GAGTC	5 cut(s)	326, 572, 1142, 1985, 2190
MmeI	TCCRAC	4 cut(s)	352, 552, 2100, 2438
MroXI	GAANNNNTTC	1 cut(s)	951
MspA1I	CMGCKG	2 cut(s)	1314, 1400
MspCI	CTTAAG	1 cut(s)	2710
MspI	CCGG	1 cut(s)	798
MspR9I	CCNGG	4 cut(s)	1168, 1331, 2282, 2776
MunI	CAATTG	2 cut(s)	1548, 2331
Mva1269I	GAATGC	4 cut(s)	350, 1441, 1684, 2344
MvaI	CCWGG	4 cut(s)	1168, 1331, 2282, 2776
MwoI	GCNNNNNNNGC	6 cut(s)	96, 415, 477, 1702, 2322, 2516
NdeII	GATC	7 cut(s)	878, 1144, 1250, 1558, 1614, 1747, 1981
NheI	GCTAGC	1 cut(s)	644
NlaIII	CATG	9 cut(s)	284, 413, 947, 1421, 1479, 1813, 2490, 2609, 2732
NlaIV	GGNNCC	7 cut(s)	54, 244, 909, 1918, 2639, 2654, 2655
NmuCI	GTSAC	5 cut(s)	425, 622, 1112, 1149, 2731
NspI	RCATGY	3 cut(s)	413, 2490, 2609
PacI	TTAATTAA	1 cut(s)	558
PaeI	GCATGC	1 cut(s)	413
PaeR7I	CTCGAG	2 cut(s)	1203, 2311
PagI	TCATGA	1 cut(s)	943
PaqCI	CACCTGC	1 cut(s)	802
PciI	ACATGT	2 cut(s)	2486, 2605
PctI	GAATGC	4 cut(s)	350, 1441, 1684, 2344
PdmI	GAANNNNTTC	1 cut(s)	951
PfeI	GAWTC	9 cut(s)	62, 305, 855, 1031, 1390, 1409, 2359, 2420, 2771
PflMI	CCANNNNNTGG	1 cut(s)	2119
PkrI	GCNGC	5 cut(s)	482, 933, 1441, 2136, 2146
PleI	GAGTC	5 cut(s)	325, 572, 1141, 1984, 2189
PpsI	GAGTC	5 cut(s)	325, 572, 1141, 1984, 2189
PpuMI	RGGWCCY	1 cut(s)	2638
PscI	ACATGT	2 cut(s)	2486, 2605
PshAI	GACNNNNGTC	1 cut(s)	2180
PshBI	ATTAAT	2 cut(s)	554, 1572
Psp124BI	GAGCTC	4 cut(s)	34, 1323, 1698, 2757
Psp5II	RGGWCCY	1 cut(s)	2638
Psp6I	CCWGG	4 cut(s)	1166, 1329, 2280, 2774
PspFI	CCCAGC	2 cut(s)	1017, 1913
PspGI	CCWGG	4 cut(s)	1166, 1329, 2280, 2774
PspN4I	GGNNCC	7 cut(s)	54, 244, 909, 1918, 2639, 2654, 2655
PspOMI	GGGCCC	2 cut(s)	1916, 2652
PspPI	GGNCC	7 cut(s)	800, 1916, 1917, 1929, 2638, 2652, 2653
PspPPI	RGGWCCY	1 cut(s)	2638
PspXI	VCTCGAGB	1 cut(s)	2311
PstNI	CAGNNNCTG	2 cut(s)	2018, 2210
PsuI	RGATCY	2 cut(s)	1144, 1558
PvuII	CAGCTG	1 cut(s)	1400
RsaI	GTAC	6 cut(s)	979, 1090, 1335, 1362, 1951, 2409
RsaNI	GTAC	6 cut(s)	978, 1089, 1334, 1361, 1950, 2408
Rsr2I	CGGWCCG	1 cut(s)	800
RsrII	CGGWCCG	1 cut(s)	800
SacI	GAGCTC	4 cut(s)	34, 1323, 1698, 2757
SatI	GCNGC	5 cut(s)	481, 932, 1440, 2135, 2145
Sau3AI	GATC	7 cut(s)	878, 1144, 1250, 1558, 1614, 1747, 1981
Sau96I	GGNCC	7 cut(s)	800, 1916, 1917, 1929, 2638, 2652, 2653
ScaI	AGTACT	1 cut(s)	1090
SchI	GAGTC	5 cut(s)	326, 572, 1142, 1985, 2190
ScrFI	CCNGG	4 cut(s)	1168, 1331, 2282, 2776
SduI	GDGCHC	6 cut(s)	34, 1323, 1698, 1920, 2656, 2757
SexAI	ACCWGGT	2 cut(s)	1329, 2280
SfaNI	GCATC	5 cut(s)	1051, 1463, 1838, 2614, 2686
SfcI	CTRYAG	1 cut(s)	2019
Sfr274I	CTCGAG	2 cut(s)	1203, 2311
SinI	GGWCC	2 cut(s)	800, 2638
SlaI	CTCGAG	2 cut(s)	1203, 2311
SmlI	CTYRAG	3 cut(s)	1203, 2311, 2710
SmoI	CTYRAG	3 cut(s)	1203, 2311, 2710
SpeI	ACTAGT	2 cut(s)	1799, 1958
SphI	GCATGC	1 cut(s)	413
SsiI	CCGC	6 cut(s)	348, 766, 803, 1314, 2134, 2657
SspI	AATATT	1 cut(s)	2227
SstI	GAGCTC	4 cut(s)	34, 1323, 1698, 2757
StyD4I	CCNGG	4 cut(s)	1166, 1329, 2280, 2774
StyI	CCWWGG	2 cut(s)	903, 1925
TaaI	ACNGT	8 cut(s)	459, 941, 1093, 1338, 1843, 2093, 2393, 2447
TaiI	ACGT	1 cut(s)	1055
TaqI	TCGA	5 cut(s)	594, 1204, 1249, 1692, 2312
TatI	WGTACW	3 cut(s)	977, 1088, 2407
TauI	GCSGC	1 cut(s)	2137
TfiI	GAWTC	9 cut(s)	62, 305, 855, 1031, 1390, 1409, 2359, 2420, 2771
TscAI	CASTG	9 cut(s)	398, 482, 625, 1158, 1624, 1680, 2215, 2398, 2452
TseFI	GTSAC	5 cut(s)	425, 622, 1112, 1149, 2731
TseI	GCWGC	4 cut(s)	480, 931, 1439, 2144
Tsp45I	GTSAC	5 cut(s)	425, 622, 1112, 1149, 2731
TspGWI	ACGGA	1 cut(s)	1512
TspRI	CASTG	9 cut(s)	398, 482, 625, 1158, 1624, 1680, 2215, 2398, 2452
Van91I	CCANNNNNTGG	1 cut(s)	2119
Vha464I	CTTAAG	1 cut(s)	2710
VpaK11BI	GGWCC	2 cut(s)	800, 2638
VspI	ATTAAT	2 cut(s)	554, 1572
XapI	RAATTY	5 cut(s)	781, 1722, 2005, 2542, 2596
XbaI	TCTAGA	1 cut(s)	2455
XceI	RCATGY	3 cut(s)	413, 2490, 2609
XcmI	CCANNNNNNNNNTGG	2 cut(s)	462, 2699
XhoI	CTCGAG	2 cut(s)	1203, 2311
XmnI	GAANNNNTTC	1 cut(s)	951
ZrmI	AGTACT	1 cut(s)	1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.