Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0008431

Physical Location & Seq

Genomic Coordinates Forward (+)

710231 .. 716872

Gene Structure 6642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G008700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2967 bp

ATGGGGAAGAAAGTTAAGAAGAAGGCAAGGGCGGCTCCTCAAAAGGACAAGTGGATTGCAGCTGATTCCCCAAAGAAAGCTCCCCAACCAAGCAACCCAAGTGTTAAGAATGGTGATGATGCAGTTTCAGTTCCAAAAGAGAAAAAACCTTGTCCTCATGTTGACAAAGGTGTAGATTTGAATAAATTGTCTTCTAAAATTGGGTCCTCAGAACTTGTTAGGTGCGAAGATTGTAGGGAAGGGGCGCTTGATAGGAGAGGGGGTAAAGGAAAGGGCAAACATGGTAAGAAGAAAGGAAGTGCTTCAGTGGATTCAAAATCTGAGTCAAAAGCCATTTGGGTTTGTTTGGAATGTGGTCATTATTCTTGTGGAGGGGTTGGACTGCCTACAACCCCTCAATGCCATGCAATTCGGCATGCGAGGCAAACTCGTCACCCATTAGTGATCCACTTCGAAAACCCTCAGCTGCGGTGGTGCTTTTCTTGTAGCATGCTTATTAAAATTGATAAGATGGAAGAGAATAGTGAACAAAAAGATGTGTTTTCGGATGTTGTGAAATTAATTAAGGGTCATTCATCAGAGGAGTCATCTGTTAATGTTGAGGATGTGTGGTTTGGTAATGGCAGTGTGACAAGTGACATCAAATCAGCTAACAATATATCAAGTGATTTGGATGGGAGAGGTGGTTATATGGTGAGAGGGTTAGTTAATCTTGGTAACACTTGCTTCTTTAATTCTGTCTTACAGAATATTCTAGCTATAGATAGGCTGCGGGGTTACTTCTTAAATGTTGATGCATTTTCTGGAGCTCTTACTATTTCCTTGAAGAAACTCTTTACTGAAACAAAACCAGAGGCAGGATTTAGGAACGTGATAAACCCAAGAGCGTTTTTTGGGTGTGTCTGTTCCAAGGCTCCCCAGTTTAGGGGTTATCAGCAGCAAGACAGTCATGAATTGCTTCGTTGCTTACTGGATGGCTTGTGCACTGAGGAGTTGAGTATGAGGAAACGTATCAGTTCTTCCCGGGAAAATGGGAATTCATCAAATCCAGGTCCTACTTTTGTGGATGCTGTATTTGGGGGGCAAATATCAAGTACCGTTTCTTGCGTCGAATGTGGCCACTCCTCTACTGTCTATGAGTCATTTTTAGATCTGTCACTGCCAGTTCCAACCAGGAAATGCCCACCTAAGACAGCTCAACCTACCTCTCGAGCAAAGAAGACAAAGTTGCCACCCAAGAGGAGTGGAAAGGTTCGGTCGAAAATTAACAAGGACAAGAGTTCTGCACCATCATCAAGTGTTGCAACCCCATCAACCAGCAGCGAGGTTTCTAGCCAGCCACAGTCCGGTTCAACTGACCCAAATGTGGTTGAACAATGGGGTTTAGTTATGAAGAATCTCTCTGCTGTCCAAGAATCTGAAAATGAACAAGTCTTTGAGGATGCAGCAGAGCAAACATCAACTTTGTTGAATGACTGTACATGGTTGGATTATCTTGATATGGGAAATATGTCAGATGACAATGATTTTGTTTCACAAAACAATGATGCTTCAACTGTTCAAGATTCTGAAAACAAGAATGCACTTAATGATATCTTGCTACCGCCTGACTCTGAATCTGGTAATCAGGTTTCTACGCTTAATGGGAAACCAAATGTAAAACCTGACTTTTCTTCAGTGAATCCTTGGGAGGAAGAGCTCCCATTACAGGTTCAGGGTTCTGAAGTTTTGTTGCTTCCATATAAAGAAGAGTGTTCTGTCACTGAGGAAATCATAGGAAGAGAAGATGAGGCCTCTTCATCGGTTGTTGGTGGTGGACAAGATGAATTTGATGGTTTTGGGGACTTATTCAATGAGCCGGAGGTTGCTGCAGGGCCCACTGCAAGGCCCTCTGTTGGTGAGGGAGGAACAGAAACTGGTTTTGTAGCTAGCGAATCTGATCCAGATGAAGTTGATGATAGTGATTCTCCAGTGTCTGTTGAGAGTTGTTTGGCTCATTTCATAAAGCCTGAACTTCTTGCCAATGAAAATGCTTGGCATTGTGAGAACTGTTCCAGAACTCTTCAACGCCAAAGGTTGGAAGTAAAGAAGCAGGTAAAATCTTCAGCTCAAATTTTGATAAATGGATGTGAGACTAGAGCAGAAAGTGATTCACTGAGTTTAAATATGGGCCTGTGCCCTGCTGATGTCAGAAATCTTAGTAATGGGAATTTGAATAGCAGTACTGGTTGTAACCATTTTGGTGAAGACTTGCATGATGGGAAAATAAATTGCTCATCAATTGAGAATGGTCGATCAGATAAGCTGAATGCTGCTGTTCGTCAACAACAAGAAGGAAACAACGAGATGAAAGATGCACTCCCAGTGCAATCAAATACTTCAGATTGCAATAACACTTGCAGTCGAGAAAGTTACATTGATCAAGCAATTGAGTCTTGTGCTGACGAGCCTAGAACTGCAGGATGTACCTCTGACAATGTTCCACAGACTTATTCTGGGATATTGGATTGTAAACATGAATCAGAAGAAAGTGAAGACGAGGAAATAAATTCCAAATGTGTGAAGGTGAAGAGGGATGCGACTAAAAGGGTCCTCATTAACAGGACCCCACCTATTTTGACTATTCATCTCAAGCGGTTCAGCCAAGATGCTCGTGGCCGCTTAAGTAAATTGAACGGCCATGTCAGTTTCAGAGAAAAAATTGATCTTAGACCATATATGGATTCCAGGTCCACAGATGGAGAGAAGTATGAATACCGCCTAATTGGGGTTGTGGAGCATTCTGGGACGATGAGAGGGGGCCACTATGTTGCATATGTGAGAGGGGGTGAAAGGAGCAGAGGAAAAGCTGAGAAAGAAAATAATGGTCATGTGTGGTATTATGCTAGTGATGCACATGTGCGTCAAGTTTCCCTAGATGAGGTTCTTCACTGTGAGGCCTATATCTTATTCTATGAAAAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009987 GO:0019538 GO:0019941 GO:0030163 GO:0032991 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-UBP

Protein Analysis

989

Amino Acids

108.27

Weight (kDa)

5.61

Isoelectric Point (pI)

50.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008431)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04860
fragaria_vesca	FvH4_4g16490 FvH4_4g16490
malus_domestica	MD04G1009400.v1.1 MD13G1284700.v1.1
prunus_persica	Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1 Prupe.1G008700_v2.0.a1
pyrus_communis	pycom04g00720 pycom420g01370
rosa_chinensis	RchiOBHm_Chr4g0415171
rosa_laevigata	RLG00000008090
rosa_multiflora	Rmu_sc0003748.1_g000031 Rmu_sc0033472.1_g000001
rosa_roxburghii	Rroxscaffold_5G00359000
rosa_rugosa	Rorug04G0132500 Rorug04G0132500
rosa_samantha	Rh4AG192800 Rh4BG190900 Rh4CG203600 Rh4DG190700
rosa_wichuraiana	Rw4G016390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2083
AccB7I	CCANNNNNTGG	1 cut(s)	2077
AciI	CCGC	7 cut(s)	32, 469, 772, 1604, 2635, 2659, 2758
AclWI	GGATC	2 cut(s)	439, 1934
AcoI	YGGCCR	3 cut(s)	1117, 2656, 2677
AcsI	RAATTY	5 cut(s)	1036, 1826, 2112, 2209, 2548
AcuI	CTGAAG	5 cut(s)	288, 1659, 1743, 2088, 2364
AfaI	GTAC	4 cut(s)	1096, 1480, 2224, 2467
AflII	CTTAAG	1 cut(s)	2662
AflIII	ACRYGT	1 cut(s)	2896
AjnI	CCWGG	3 cut(s)	1048, 1172, 2726
Alw21I	GWGCWC	3 cut(s)	811, 986, 1701
Alw26I	GTCTC	1 cut(s)	2126
Alw44I	GTGCAC	1 cut(s)	982
AlwI	GGATC	2 cut(s)	439, 1934
AlwNI	CAGNNNCTG	2 cut(s)	1916, 1976
Ama87I	CYCGRG	2 cut(s)	1023, 1209
AoxI	GGCC	9 cut(s)	1117, 1791, 1874, 1886, 2170, 2656, 2677, 2800, 2937
ApaI	GGGCCC	1 cut(s)	1878
ApaLI	GTGCAC	1 cut(s)	982
ApeKI	GCWGC	8 cut(s)	59, 466, 769, 937, 1320, 1445, 1868, 2312
ApoI	RAATTY	5 cut(s)	1036, 1826, 2112, 2209, 2548
ArsI	GACNNNNNNTTYG	4 cut(s)	308, 340, 1511, 1543
AseI	ATTAAT	1 cut(s)	560
Asp700I	GAANNNNTTC	2 cut(s)	301, 957
AspLEI	GCGC	1 cut(s)	247
AsuC2I	CCSGG	2 cut(s)	1024, 1025
AsuHPI	GGTGA	7 cut(s)	125, 425, 706, 1910, 2255, 2578, 2840
AsuII	TTCGAA	1 cut(s)	453
AsuNHI	GCTAGC	1 cut(s)	1928
AvaI	CYCGRG	2 cut(s)	1023, 1209
AvaII	GGWCC	5 cut(s)	204, 1052, 2590, 2604, 2730
BaeGI	GKGCMC	3 cut(s)	986, 1878, 2180
BalI	TGGCCA	1 cut(s)	1119
BanII	GRGCYC	3 cut(s)	811, 1701, 1878
BarI	GAAGNNNNNNTAC	4 cut(s)	1003, 1035, 2738, 2770
BauI	CACGAG	1 cut(s)	2652
BbsI	GAAGAC	4 cut(s)	183, 1226, 2253, 2541
Bbv12I	GWGCWC	3 cut(s)	811, 986, 1701
BbvCI	CCTCAGC	1 cut(s)	462
BbvI	GCAGC	8 cut(s)	71, 453, 756, 949, 1332, 1457, 1855, 2299
BccI	CCATC	8 cut(s)	505, 668, 968, 1297, 1318, 1826, 2252, 2732
BceAI	ACGGC	1 cut(s)	2692
BciT130I	CCWGG	3 cut(s)	1050, 1174, 2728
BclI	TGATCA	1 cut(s)	2419
BcnI	CCSGG	2 cut(s)	1024, 1025
BcoDI	GTCTC	1 cut(s)	2126
BfaI	CTAG	7 cut(s)	755, 1332, 1929, 2136, 2451, 2886, 2915
BfmI	CTRYAG	3 cut(s)	759, 1869, 2457
BfoI	RGCGCY	1 cut(s)	248
BfrI	CTTAAG	1 cut(s)	2662
BfuAI	ACCTGC	1 cut(s)	2083
BglII	AGATCT	1 cut(s)	1150
BmcAI	AGTACT	1 cut(s)	2224
Bme1390I	CCNGG	5 cut(s)	1024, 1025, 1050, 1174, 2728
Bme18I	GGWCC	5 cut(s)	204, 1052, 2590, 2604, 2730
BmeT110I	CYCGRG	2 cut(s)	1023, 1209
BmiI	GGNNCC	7 cut(s)	36, 205, 915, 1876, 2591, 2606, 2801
BmrFI	CCNGG	5 cut(s)	1024, 1025, 1050, 1174, 2728
BmrI	ACTGGG	2 cut(s)	913, 2357
BmsI	GCATC	9 cut(s)	109, 784, 1057, 1432, 1537, 2344, 2566, 2638, 2881
BmtI	GCTAGC	1 cut(s)	1932
BmuI	ACTGGG	2 cut(s)	913, 2357
BpiI	GAAGAC	4 cut(s)	183, 1226, 2253, 2541
BplI	GAGNNNNNCTC	2 cut(s)	412, 444
BpmI	CTGGAG	2 cut(s)	825, 1953
Bpu10I	CCTNAGC	1 cut(s)	462
Bpu14I	TTCGAA	1 cut(s)	453
BpuEI	CTTGAG	1 cut(s)	2615
BpuMI	CCSGG	2 cut(s)	1024, 1025
BsaJI	CCNNGG	3 cut(s)	909, 1023, 1685
BsaWI	WCCGGW	1 cut(s)	1346
BsaXI	ACNNNNNCTCC	4 cut(s)	247, 277, 670, 700
Bse1I	ACTGG	7 cut(s)	919, 975, 1163, 1921, 1970, 2230, 2363
BseBI	CCWGG	3 cut(s)	1050, 1174, 2728
BseDI	CCNNGG	3 cut(s)	909, 1023, 1685
BseGI	GGATG	9 cut(s)	553, 610, 679, 979, 1072, 1447, 2132, 2468, 2581
BseMII	CTCAG	7 cut(s)	222, 312, 476, 978, 1755, 2147, 2841
BseNI	ACTGG	7 cut(s)	919, 975, 1163, 1921, 1970, 2230, 2363
BseRI	GAGGAG	5 cut(s)	27, 596, 1004, 1114, 1255
BseSI	GKGCMC	3 cut(s)	986, 1878, 2180
BseXI	GCAGC	8 cut(s)	71, 453, 756, 949, 1332, 1457, 1855, 2299
BsgI	GTGCAG	1 cut(s)	1269
Bsh1285I	CGRYCG	1 cut(s)	1259
BshFI	GGCC	9 cut(s)	1119, 1793, 1876, 1888, 2172, 2658, 2679, 2802, 2939
BsiEI	CGRYCG	1 cut(s)	1259
BsiHKAI	GWGCWC	3 cut(s)	811, 986, 1701
BsiHKCI	CYCGRG	2 cut(s)	1023, 1209
BsiSI	CCGG	3 cut(s)	1024, 1347, 1859
BslFI	GGGAC	2 cut(s)	1856, 2800
BsmAI	GTCTC	1 cut(s)	2126
BsmFI	GGGAC	2 cut(s)	1856, 2800
BsmI	GAATGC	3 cut(s)	1585, 2314, 2779
BsnI	GGCC	9 cut(s)	1119, 1793, 1876, 1888, 2172, 2658, 2679, 2802, 2939
BsoBI	CYCGRG	2 cut(s)	1023, 1209
Bsp119I	TTCGAA	1 cut(s)	453
Bsp120I	GGGCCC	1 cut(s)	1874
Bsp1286I	GDGCHC	5 cut(s)	811, 986, 1701, 1878, 2180
Bsp1407I	TGTACA	1 cut(s)	1478
Bsp143I	GATC	6 cut(s)	444, 1150, 1939, 2294, 2419, 2704
BspACI	CCGC	7 cut(s)	32, 469, 772, 1604, 2635, 2659, 2758
BspANI	GGCC	9 cut(s)	1119, 1793, 1876, 1888, 2172, 2658, 2679, 2802, 2939
BspCNI	CTCAG	7 cut(s)	221, 313, 475, 979, 1756, 2148, 2842
BspHI	TCATGA	1 cut(s)	949
BspLI	GGNNCC	7 cut(s)	36, 205, 915, 1876, 2591, 2606, 2801
BspMAI	CTGCAG	2 cut(s)	1873, 2461
BspMI	ACCTGC	1 cut(s)	2083
BspOI	GCTAGC	1 cut(s)	1932
BspPI	GGATC	2 cut(s)	439, 1934
BspQI	GCTCTTC	1 cut(s)	1689
BspT104I	TTCGAA	1 cut(s)	453
BspTI	CTTAAG	1 cut(s)	2662
BsrGI	TGTACA	1 cut(s)	1478
BsrI	ACTGG	7 cut(s)	919, 975, 1163, 1921, 1970, 2230, 2363
BssECI	CCNNGG	3 cut(s)	909, 1023, 1685
BssMI	GATC	6 cut(s)	444, 1150, 1939, 2294, 2419, 2704
BssSI	CACGAG	1 cut(s)	2652
BssT1I	CCWWGG	2 cut(s)	909, 1685
Bst2BI	CACGAG	1 cut(s)	2652
Bst2UI	CCWGG	3 cut(s)	1050, 1174, 2728
Bst4CI	ACNGT	8 cut(s)	947, 1099, 1132, 1344, 1478, 1558, 2051, 2933
Bst6I	CTCTTC	7 cut(s)	510, 1689, 1743, 1774, 1801, 2067, 2564
BstAFI	CTTAAG	1 cut(s)	2662
BstAUI	TGTACA	1 cut(s)	1478
BstBI	TTCGAA	1 cut(s)	453
BstC8I	GCNNGC	4 cut(s)	417, 491, 1337, 1930
BstENI	CCTNNNNNAGG	1 cut(s)	2918
BstF5I	GGATG	9 cut(s)	553, 610, 679, 979, 1072, 1447, 2132, 2468, 2581
BstH2I	RGCGCY	1 cut(s)	248
BstHHI	GCGC	1 cut(s)	247
BstKTI	GATC	6 cut(s)	447, 1153, 1942, 2297, 2422, 2707
BstMAI	GTCTC	1 cut(s)	2126
BstMBI	GATC	6 cut(s)	444, 1150, 1939, 2294, 2419, 2704
BstMCI	CGRYCG	1 cut(s)	1259
BstMWI	GCNNNNNNNGC	3 cut(s)	32, 421, 2891
BstNI	CCWGG	3 cut(s)	1050, 1174, 2728
BstNSI	RCATGY	3 cut(s)	419, 493, 2900
BstSCI	CCNGG	5 cut(s)	1022, 1023, 1048, 1172, 2726
BstSFI	CTRYAG	3 cut(s)	759, 1869, 2457
BstSLI	GKGCMC	3 cut(s)	986, 1878, 2180
BstV1I	GCAGC	8 cut(s)	71, 453, 756, 949, 1332, 1457, 1855, 2299
BstV2I	GAAGAC	4 cut(s)	183, 1226, 2253, 2541
BstX2I	RGATCY	1 cut(s)	1150
BstYI	RGATCY	1 cut(s)	1150
BsuRI	GGCC	9 cut(s)	1119, 1793, 1876, 1888, 2172, 2658, 2679, 2802, 2939
BtsCI	GGATG	9 cut(s)	553, 610, 679, 979, 1072, 1447, 2132, 2468, 2581
BtsI	GCAGTG	3 cut(s)	631, 1157, 1878
BveI	ACCTGC	1 cut(s)	2083
Cac8I	GCNNGC	4 cut(s)	417, 491, 1337, 1930
CaiI	CAGNNNCTG	2 cut(s)	1916, 1976
CciI	TCATGA	1 cut(s)	949
CfoI	GCGC	1 cut(s)	247
Cfr9I	CCCGGG	1 cut(s)	1023
CseI	GACGC	2 cut(s)	1096, 2891
Csp6I	GTAC	4 cut(s)	1095, 1479, 2223, 2466
CspCI	CAANNNNNGTGG	4 cut(s)	1225, 1260, 2598, 2633
CviQI	GTAC	4 cut(s)	1095, 1479, 2223, 2466
DpnI	GATC	6 cut(s)	446, 1152, 1941, 2296, 2421, 2706
DpnII	GATC	6 cut(s)	444, 1150, 1939, 2294, 2419, 2704
DraI	TTTAAA	1 cut(s)	2163
EaeI	YGGCCR	3 cut(s)	1117, 2656, 2677
Eam1104I	CTCTTC	7 cut(s)	510, 1689, 1743, 1774, 1801, 2067, 2564
EarI	CTCTTC	7 cut(s)	510, 1689, 1743, 1774, 1801, 2067, 2564
Ecl136II	GAGCTC	2 cut(s)	809, 1699
Eco130I	CCWWGG	2 cut(s)	909, 1685
Eco147I	AGGCCT	2 cut(s)	1793, 2939
Eco24I	GRGCYC	3 cut(s)	811, 1701, 1878
Eco32I	GATATC	1 cut(s)	1594
Eco47I	GGWCC	5 cut(s)	204, 1052, 2590, 2604, 2730
Eco53kI	GAGCTC	2 cut(s)	809, 1699
Eco57I	CTGAAG	5 cut(s)	288, 1659, 1743, 2088, 2364
Eco88I	CYCGRG	2 cut(s)	1023, 1209
EcoICRI	GAGCTC	2 cut(s)	809, 1699
EcoNI	CCTNNNNNAGG	1 cut(s)	2918
EcoO109I	RGGNCCY	6 cut(s)	204, 1052, 1874, 1887, 2590, 2604
EcoRI	GAATTC	1 cut(s)	1036
EcoRII	CCWGG	3 cut(s)	1048, 1172, 2726
EcoRV	GATATC	1 cut(s)	1594
EcoT14I	CCWWGG	2 cut(s)	909, 1685
EcoT22I	ATGCAT	1 cut(s)	799
EcoT38I	GRGCYC	3 cut(s)	811, 1701, 1878
ErhI	CCWWGG	2 cut(s)	909, 1685
FalI	AAGNNNNNCTT	4 cut(s)	231, 263, 818, 850
FaqI	GGGAC	2 cut(s)	1856, 2800
FauI	CCCGC	1 cut(s)	765
FauNDI	CATATG	1 cut(s)	2815
FbaI	TGATCA	1 cut(s)	2419
FokI	GGATG	9 cut(s)	560, 617, 686, 986, 1079, 1454, 2139, 2475, 2588
FriOI	GRGCYC	3 cut(s)	811, 1701, 1878
FspBI	CTAG	7 cut(s)	755, 1332, 1929, 2136, 2451, 2886, 2915
GlaI	GCGC	1 cut(s)	246
GsuI	CTGGAG	2 cut(s)	825, 1953
HaeII	RGCGCY	1 cut(s)	248
HaeIII	GGCC	9 cut(s)	1119, 1793, 1876, 1888, 2172, 2658, 2679, 2802, 2939
HapII	CCGG	3 cut(s)	1024, 1347, 1859
HgaI	GACGC	2 cut(s)	1096, 2891
HhaI	GCGC	1 cut(s)	247
Hin6I	GCGC	1 cut(s)	245
HinP1I	GCGC	1 cut(s)	245
HincII	GTYRAC	2 cut(s)	163, 2324
HindII	GTYRAC	2 cut(s)	163, 2324
HpaII	CCGG	3 cut(s)	1024, 1347, 1859
HphI	GGTGA	7 cut(s)	125, 425, 706, 1910, 2255, 2578, 2840
Hpy166II	GTNNAC	7 cut(s)	163, 527, 984, 1817, 2324, 2513, 2733
Hpy188III	TCNNGA	8 cut(s)	804, 950, 1209, 1496, 1562, 1943, 2055, 2405
Hpy8I	GTNNAC	7 cut(s)	163, 527, 984, 1817, 2324, 2513, 2733
Hpy99I	CGWCG	1 cut(s)	1112
HpyAV	CCTTC	4 cut(s)	16, 233, 2327, 2557
HpyCH4III	ACNGT	8 cut(s)	947, 1099, 1132, 1344, 1478, 1558, 2051, 2933
HpyCH4IV	ACGT	2 cut(s)	870, 1009
HpyF10VI	GCNNNNNNNGC	3 cut(s)	32, 421, 2891
HpySE526I	ACGT	2 cut(s)	870, 1009
HspAI	GCGC	1 cut(s)	245
Ksp22I	TGATCA	1 cut(s)	2419
Kzo9I	GATC	6 cut(s)	444, 1150, 1939, 2294, 2419, 2704
LguI	GCTCTTC	1 cut(s)	1689
LmnI	GCTCC	7 cut(s)	40, 85, 806, 919, 1704, 2776, 2835
Lsp1109I	GCAGC	8 cut(s)	71, 453, 756, 949, 1332, 1457, 1855, 2299
LweI	GCATC	9 cut(s)	109, 784, 1057, 1432, 1537, 2344, 2566, 2638, 2881
MaeI	CTAG	7 cut(s)	755, 1332, 1929, 2136, 2451, 2886, 2915
MaeII	ACGT	2 cut(s)	870, 1009
MaeIII	GTNAC	9 cut(s)	431, 628, 635, 716, 776, 1155, 1759, 2231, 2411
MalI	GATC	6 cut(s)	446, 1152, 1941, 2296, 2421, 2706
MboI	GATC	6 cut(s)	444, 1150, 1939, 2294, 2419, 2704
MfeI	CAATTG	2 cut(s)	2280, 2427
MflI	RGATCY	1 cut(s)	1150
MhlI	GDGCHC	5 cut(s)	811, 986, 1701, 1878, 2180
MlsI	TGGCCA	1 cut(s)	1119
MluNI	TGGCCA	1 cut(s)	1119
MlyI	GAGTC	5 cut(s)	332, 593, 1148, 1604, 2441
MmeI	TCCRAC	4 cut(s)	358, 1193, 1467, 2058
Mox20I	TGGCCA	1 cut(s)	1119
Mph1103I	ATGCAT	1 cut(s)	799
MroXI	GAANNNNTTC	2 cut(s)	301, 957
MscI	TGGCCA	1 cut(s)	1119
MslI	CAYNNNNRTG	1 cut(s)	2241
Msp20I	TGGCCA	1 cut(s)	1119
MspA1I	CMGCKG	2 cut(s)	62, 466
MspCI	CTTAAG	1 cut(s)	2662
MspI	CCGG	3 cut(s)	1024, 1347, 1859
MspR9I	CCNGG	5 cut(s)	1024, 1025, 1050, 1174, 2728
MunI	CAATTG	2 cut(s)	2280, 2427
Mva1269I	GAATGC	3 cut(s)	1585, 2314, 2779
MvaI	CCWGG	3 cut(s)	1050, 1174, 2728
MwoI	GCNNNNNNNGC	3 cut(s)	32, 421, 2891
NciI	CCSGG	2 cut(s)	1024, 1025
NdeI	CATATG	1 cut(s)	2815
NdeII	GATC	6 cut(s)	444, 1150, 1939, 2294, 2419, 2704
NheI	GCTAGC	1 cut(s)	1928
NlaIV	GGNNCC	7 cut(s)	36, 205, 915, 1876, 2591, 2606, 2801
NmuCI	GTSAC	5 cut(s)	431, 628, 635, 1155, 1759
NsiI	ATGCAT	1 cut(s)	799
NspI	RCATGY	3 cut(s)	419, 493, 2900
NspV	TTCGAA	1 cut(s)	453
PacI	TTAATTAA	1 cut(s)	564
PaeI	GCATGC	2 cut(s)	419, 493
PaeR7I	CTCGAG	1 cut(s)	1209
PagI	TCATGA	1 cut(s)	949
PceI	AGGCCT	2 cut(s)	1793, 2939
PciI	ACATGT	1 cut(s)	2896
PciSI	GCTCTTC	1 cut(s)	1689
PctI	GAATGC	3 cut(s)	1585, 2314, 2779
PdmI	GAANNNNTTC	2 cut(s)	301, 957
PflMI	CCANNNNNTGG	1 cut(s)	2077
PleI	GAGTC	5 cut(s)	331, 592, 1147, 1604, 2440
PpsI	GAGTC	5 cut(s)	331, 592, 1147, 1604, 2440
PpuMI	RGGWCCY	4 cut(s)	204, 1052, 2590, 2604
PscI	ACATGT	1 cut(s)	2896
PshBI	ATTAAT	1 cut(s)	560
Psp124BI	GAGCTC	2 cut(s)	811, 1701
Psp5II	RGGWCCY	4 cut(s)	204, 1052, 2590, 2604
Psp6I	CCWGG	3 cut(s)	1048, 1172, 2726
PspGI	CCWGG	3 cut(s)	1048, 1172, 2726
PspN4I	GGNNCC	7 cut(s)	36, 205, 915, 1876, 2591, 2606, 2801
PspOMI	GGGCCC	1 cut(s)	1874
PspPPI	RGGWCCY	4 cut(s)	204, 1052, 2590, 2604
PstI	CTGCAG	2 cut(s)	1873, 2461
PstNI	CAGNNNCTG	2 cut(s)	1916, 1976
PsuI	RGATCY	1 cut(s)	1150
PvuII	CAGCTG	2 cut(s)	62, 466
RsaI	GTAC	4 cut(s)	1096, 1480, 2224, 2467
RsaNI	GTAC	4 cut(s)	1095, 1479, 2223, 2466
RseI	CAYNNNNRTG	1 cut(s)	2241
SacI	GAGCTC	2 cut(s)	811, 1701
SapI	GCTCTTC	1 cut(s)	1689
Sau3AI	GATC	6 cut(s)	444, 1150, 1939, 2294, 2419, 2704
ScaI	AGTACT	1 cut(s)	2224
SchI	GAGTC	5 cut(s)	332, 593, 1148, 1604, 2441
ScrFI	CCNGG	5 cut(s)	1024, 1025, 1050, 1174, 2728
SduI	GDGCHC	5 cut(s)	811, 986, 1701, 1878, 2180
SfaNI	GCATC	9 cut(s)	109, 784, 1057, 1432, 1537, 2344, 2566, 2638, 2881
SfcI	CTRYAG	3 cut(s)	759, 1869, 2457
Sfr274I	CTCGAG	1 cut(s)	1209
SfuI	TTCGAA	1 cut(s)	453
SinI	GGWCC	5 cut(s)	204, 1052, 2590, 2604, 2730
SlaI	CTCGAG	1 cut(s)	1209
SmaI	CCCGGG	1 cut(s)	1025
SmiMI	CAYNNNNRTG	1 cut(s)	2241
SmlI	CTYRAG	3 cut(s)	1209, 2630, 2662
SmoI	CTYRAG	3 cut(s)	1209, 2630, 2662
SphI	GCATGC	2 cut(s)	419, 493
SseBI	AGGCCT	2 cut(s)	1793, 2939
SsiI	CCGC	7 cut(s)	32, 469, 772, 1604, 2635, 2659, 2758
SspI	AATATT	1 cut(s)	751
SspMI	CTAG	7 cut(s)	755, 1332, 1929, 2136, 2451, 2886, 2915
SstI	GAGCTC	2 cut(s)	811, 1701
StuI	AGGCCT	2 cut(s)	1793, 2939
StyD4I	CCNGG	5 cut(s)	1022, 1023, 1048, 1172, 2726
StyI	CCWWGG	2 cut(s)	909, 1685
TaaI	ACNGT	8 cut(s)	947, 1099, 1132, 1344, 1478, 1558, 2051, 2933
TaiI	ACGT	2 cut(s)	873, 1012
TaqI	TCGA	6 cut(s)	453, 1110, 1210, 1259, 2293, 2404
TaqII	GACCGA	1 cut(s)	1245
TatI	WGTACW	2 cut(s)	1478, 2222
TauI	GCSGC	2 cut(s)	35, 2661
TseFI	GTSAC	5 cut(s)	431, 628, 635, 1155, 1759
TseI	GCWGC	8 cut(s)	59, 466, 769, 937, 1320, 1445, 1868, 2312
Tsp45I	GTSAC	5 cut(s)	431, 628, 635, 1155, 1759
TspMI	CCCGGG	1 cut(s)	1023
Van91I	CCANNNNNTGG	1 cut(s)	2077
Vha464I	CTTAAG	1 cut(s)	2662
VneI	GTGCAC	1 cut(s)	982
VpaK11BI	GGWCC	5 cut(s)	204, 1052, 2590, 2604, 2730
VspI	ATTAAT	1 cut(s)	560
XagI	CCTNNNNNAGG	1 cut(s)	2918
XapI	RAATTY	5 cut(s)	1036, 1826, 2112, 2209, 2548
XceI	RCATGY	3 cut(s)	419, 493, 2900
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2651
XhoI	CTCGAG	1 cut(s)	1209
XmaI	CCCGGG	1 cut(s)	1023
XmnI	GAANNNNTTC	2 cut(s)	301, 957
XspI	CTAG	7 cut(s)	755, 1332, 1929, 2136, 2451, 2886, 2915
ZrmI	AGTACT	1 cut(s)	2224
Zsp2I	ATGCAT	1 cut(s)	799

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.