FvH4_4g16900
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
20836435 .. 20840314
3880 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g16900.t1

Sequence Viewer

Length: 1473 bp
ATGGCAATTGGGCAGTGCAGAGATGTTGAGAATGGGGGAACCAATAGTCTTGAGGATTTGGAACAGCCCTTTATCAAACAAGAGAAGAAGATTGTTGGTAATTATGAAGGTGGTAGTACTGGTTCAATTGGGATGGTGTTGCTTAGCACAGGTGTTGCTGTTTGTGGCTCTTTCGAGTTCGGATCATGTGTGGGCTATTCAGCACCCACTCAATCAGCTATCAGGGAAGATCTCTATCTCTCTCTAGCTCAGTTCTCCATGTTTGGCTCTATACTGACAATTGGTGCAATGCTGGGTGCTATAACGAGTGGTCGTATAGCGGACTTTCTTGGTCGAAAAGGGGCAATGAGAATGTCAGCTACTTTCTGTATTACAGGATGGCTAGCCATCTATTTCTCTGAGGGAGCTCTGTCACTTGACATCGGAAGGTTTTTAACTGGATATGGAATTGGAGTTTTCTCCTATGTGGTCCCAATATTTATAGCAGAAATTGCGCCCAAGAACCTCCGTGGAGGGCTTACAACACTAAATCAGCTCATGATTGTTACTGGAGCATCAGTTTCATTTGTAATAGGAACAATTATAAGTTGGAGGACACTAGCTATGACTGGAATCCTTCCCTGCATTGTCTTGCTTGTTGGACTATGGTTTGTTCCTGAGTCCCCTAGATGGCTGGCAAAGATTGGCCATGAGAAAGAGTTCCAAGTTGCACTACAAAGACTCCGTGGAAAATATGCAGATATATCTGATGAAACAGCTGAAATAAAAGAATATATTCTCACGCTACAAAGCCTTCCAAAATCAAGAGTGTTGGATTTGTTTCAGAGCAAATACGTTCGTTCTGTGATTATTGGGGTTGGGTTGATGGTATTTCAGCAGTTTGGAGGTATTAATGGAATAGGATTCTATGCAAGTCAAACCTTTGAAGAAGCTGGTATCTCGAGCAAAATTGGAACCATAGCTTATGCATGTGTTCAGGTCCCAATTACTGTAGTGGGGGCAATGCTGATCGATAAGTCAGGAAGGAGACCTCTTATAATGGTTTCAGCAACAGGGACTTTCCTAGGCTGTTTTCTAGCAGGAACTTCTTTCTTTCTTAAGGAATATGGTTTGCTGCTTCATTGGGTACCAACAATAGCTGTGTCTGGTGTGCTGATTTACATTGCATTTTTCTCGATCGGAATGGGAGCAGTTCCATGGGTGATAATGTCTGAGATCTTTCCAATCCATGTGAAAGGAGCTGCTGGTAGCTTAGTGGTTCTTGTGAACTGGTTGGGTGCTTGGGGAGTCTCTTATACTTACAACTTCCTTATGAGATGGAGTTCCTATAGAACTTATTACATGTATTCTGGATTCTCTTTGTTGACTATCCTATTTGTGGCAAAGTTGGTGCCAGAGACCAAAGGAAAAACACTAGAAGAAATACAGGCATGCATCAATTCAGACAGAAGAGAACAAGATATCTTGAACTGA

Protein Analysis

491

Amino Acids

53.31

Weight (kDa)

8.3

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 66 - 427 9.1e-23 Major Facilitator Superfamily
Sugar_tr PF00083 77 - 476 1.2e-89 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 584, 1037
Acc65I GGTACC 1 cut(s) 1126
AccB1I GGYRCC 2 cut(s) 1126, 1390
AciI CCGC 1 cut(s) 320
AclWI GGATC 1 cut(s) 190
AcoI YGGCCR 1 cut(s) 685
AfaI GTAC 2 cut(s) 118, 1128
AfiI CCNNNNNNNGG 2 cut(s) 669, 1378
AflII CTTAAG 1 cut(s) 1097
AflIII ACRYGT 1 cut(s) 1341
AgsI TTSAA 3 cut(s) 126, 926, 1468
Alw21I GWGCWC 1 cut(s) 409
Alw26I GTCTC 3 cut(s) 1021, 1294, 1391
AlwI GGATC 1 cut(s) 190
Ama87I CYCGRG 1 cut(s) 940
AoxI GGCC 1 cut(s) 685
ApeKI GCWGC 2 cut(s) 1114, 1241
AseI ATTAAT 1 cut(s) 891
Asp700I GAANNNNTTC 2 cut(s) 698, 774
Asp718I GGTACC 1 cut(s) 1126
AspA2I CCTAGG 1 cut(s) 1063
AspLEI GCGC 1 cut(s) 496
AspS9I GGNCC 2 cut(s) 469, 979
AsuHPI GGTGA 1 cut(s) 1213
AsuNHI GCTAGC 1 cut(s) 382
AvaI CYCGRG 1 cut(s) 940
AvaII GGWCC 2 cut(s) 469, 979
AvrII CCTAGG 1 cut(s) 1063
BalI TGGCCA 1 cut(s) 687
BanI GGYRCC 2 cut(s) 1126, 1390
BanII GRGCYC 1 cut(s) 409
Bbv12I GWGCWC 1 cut(s) 409
BbvI GCAGC 2 cut(s) 1101, 1228
BccI CCATC 6 cut(s) 127, 372, 395, 663, 859, 1311
BcgI CGANNNNNNTGC 2 cut(s) 1155, 1189
BcoDI GTCTC 3 cut(s) 1021, 1294, 1391
BfaI CTAG 7 cut(s) 245, 383, 599, 666, 1064, 1076, 1415
BfmI CTRYAG 2 cut(s) 990, 1327
BfrI CTTAAG 1 cut(s) 1097
BglII AGATCT 2 cut(s) 229, 1215
BisI GCNGC 2 cut(s) 1115, 1242
BlnI CCTAGG 1 cut(s) 1063
BlpI GCTNAGC 1 cut(s) 143
BlsI GCNGC 2 cut(s) 1116, 1243
BmcAI AGTACT 1 cut(s) 118
Bme18I GGWCC 2 cut(s) 469, 979
BmeT110I CYCGRG 1 cut(s) 940
BmgT120I GGNCC 2 cut(s) 469, 979
BmiI GGNNCC 6 cut(s) 40, 471, 955, 981, 1128, 1392
BmsI GCATC 2 cut(s) 563, 1443
BmtI GCTAGC 1 cut(s) 386
BpmI CTGGAG 1 cut(s) 570
Bpu1102I GCTNAGC 1 cut(s) 143
BpuEI CTTGAG 1 cut(s) 71
Bsa29I ATCGAT 1 cut(s) 1011
BsaBI GATNNNNATC 1 cut(s) 234
BsaI GGTCTC 2 cut(s) 1021, 1391
BsaJI CCNNGG 4 cut(s) 508, 724, 1063, 1196
BsaXI ACNNNNNCTCC 4 cut(s) 543, 573, 705, 735
Bsc4I CCNNNNNNNGG 2 cut(s) 669, 1378
Bse1I ACTGG 5 cut(s) 124, 442, 553, 613, 1274
Bse3DI GCAATG 4 cut(s) 294, 351, 1008, 1161
Bse8I GATNNNNATC 1 cut(s) 234
BseCI ATCGAT 1 cut(s) 1011
BseDI CCNNGG 4 cut(s) 508, 724, 1063, 1196
BseGI GGATG 2 cut(s) 138, 383
BseJI GATNNNNATC 1 cut(s) 234
BseLI CCNNNNNNNGG 2 cut(s) 669, 1378
BseMI GCAATG 4 cut(s) 294, 351, 1008, 1161
BseMII CTCAG 4 cut(s) 263, 390, 648, 1203
BseNI ACTGG 5 cut(s) 124, 442, 553, 613, 1274
BseXI GCAGC 2 cut(s) 1101, 1228
BseYI CCCAGC 1 cut(s) 292
BsgI GTGCAG 1 cut(s) 37
Bsh1285I CGRYCG 1 cut(s) 1179
BshFI GGCC 1 cut(s) 687
BshNI GGYRCC 2 cut(s) 1126, 1390
BshVI ATCGAT 1 cut(s) 1011
BsiEI CGRYCG 1 cut(s) 1179
BsiHKAI GWGCWC 1 cut(s) 409
BsiHKCI CYCGRG 1 cut(s) 940
BslFI GGGAC 4 cut(s) 455, 646, 965, 1069
BslI CCNNNNNNNGG 2 cut(s) 669, 1378
BsmAI GTCTC 3 cut(s) 1021, 1294, 1391
BsmFI GGGAC 4 cut(s) 455, 646, 965, 1069
BsnI GGCC 1 cut(s) 687
Bso31I GGTCTC 2 cut(s) 1021, 1391
BsoBI CYCGRG 1 cut(s) 940
Bsp1286I GDGCHC 1 cut(s) 409
Bsp143I GATC 5 cut(s) 182, 229, 1008, 1176, 1215
Bsp1720I GCTNAGC 1 cut(s) 143
Bsp19I CCATGG 1 cut(s) 1196
BspACI CCGC 1 cut(s) 320
BspANI GGCC 1 cut(s) 687
BspCNI CTCAG 4 cut(s) 262, 391, 649, 1204
BspDI ATCGAT 1 cut(s) 1011
BspHI TCATGA 1 cut(s) 537
BspLI GGNNCC 6 cut(s) 40, 471, 955, 981, 1128, 1392
BspOI GCTAGC 1 cut(s) 386
BspPI GGATC 1 cut(s) 190
BspT107I GGYRCC 2 cut(s) 1126, 1390
BspTI CTTAAG 1 cut(s) 1097
BspTNI GGTCTC 2 cut(s) 1021, 1391
BsrDI GCAATG 4 cut(s) 294, 351, 1008, 1161
BsrI ACTGG 5 cut(s) 124, 442, 553, 613, 1274
BssECI CCNNGG 4 cut(s) 508, 724, 1063, 1196
BssMI GATC 5 cut(s) 182, 229, 1008, 1176, 1215
BssT1I CCWWGG 2 cut(s) 1063, 1196
Bst4CI ACNGT 1 cut(s) 991
Bst6I CTCTTC 1 cut(s) 1444
BstAFI CTTAAG 1 cut(s) 1097
BstAPI GCANNNNNTGC 1 cut(s) 491
BstC8I GCNNGC 3 cut(s) 384, 675, 1432
BstDEI CTNAG 6 cut(s) 143, 249, 399, 657, 1212, 1252
BstDSI CCRYGG 3 cut(s) 508, 724, 1196
BstF5I GGATG 2 cut(s) 138, 383
BstHHI GCGC 1 cut(s) 496
BstKTI GATC 5 cut(s) 185, 232, 1011, 1179, 1218
BstMAI GTCTC 3 cut(s) 1021, 1294, 1391
BstMBI GATC 5 cut(s) 182, 229, 1008, 1176, 1215
BstMCI CGRYCG 1 cut(s) 1179
BstMWI GCNNNNNNNGC 1 cut(s) 491
BstNSI RCATGY 3 cut(s) 972, 1345, 1434
BstSFI CTRYAG 2 cut(s) 990, 1327
BstV1I GCAGC 2 cut(s) 1101, 1228
BstX2I RGATCY 2 cut(s) 229, 1215
BstYI RGATCY 2 cut(s) 229, 1215
Bsu15I ATCGAT 1 cut(s) 1011
BsuRI GGCC 1 cut(s) 687
BsuTUI ATCGAT 1 cut(s) 1011
BtgI CCRYGG 3 cut(s) 508, 724, 1196
BtsCI GGATG 2 cut(s) 138, 383
BtsI GCAGTG 1 cut(s) 20
BtsIMutI CAGTG 1 cut(s) 20
Cac8I GCNNGC 3 cut(s) 384, 675, 1432
CciI TCATGA 1 cut(s) 537
CfoI GCGC 1 cut(s) 496
Cfr13I GGNCC 2 cut(s) 469, 979
ClaI ATCGAT 1 cut(s) 1011
Csp6I GTAC 2 cut(s) 117, 1127
CviAII CATG 9 cut(s) 186, 259, 538, 689, 969, 1197, 1229, 1342, 1431
CviQI GTAC 2 cut(s) 117, 1127
DdeI CTNAG 6 cut(s) 143, 249, 399, 657, 1212, 1252
DpnI GATC 5 cut(s) 184, 231, 1010, 1178, 1217
DpnII GATC 5 cut(s) 182, 229, 1008, 1176, 1215
EaeI YGGCCR 1 cut(s) 685
Eam1104I CTCTTC 1 cut(s) 1444
EarI CTCTTC 1 cut(s) 1444
Ecl136II GAGCTC 1 cut(s) 407
Eco130I CCWWGG 2 cut(s) 1063, 1196
Eco24I GRGCYC 1 cut(s) 409
Eco31I GGTCTC 2 cut(s) 1021, 1391
Eco32I GATATC 1 cut(s) 1462
Eco47I GGWCC 2 cut(s) 469, 979
Eco53kI GAGCTC 1 cut(s) 407
Eco88I CYCGRG 1 cut(s) 940
EcoICRI GAGCTC 1 cut(s) 407
EcoO109I RGGNCCY 1 cut(s) 979
EcoRV GATATC 1 cut(s) 1462
EcoT14I CCWWGG 2 cut(s) 1063, 1196
EcoT22I ATGCAT 2 cut(s) 970, 1436
EcoT38I GRGCYC 1 cut(s) 409
ErhI CCWWGG 2 cut(s) 1063, 1196
FaeI CATG 9 cut(s) 189, 262, 541, 692, 972, 1200, 1232, 1345, 1434
FaqI GGGAC 4 cut(s) 455, 646, 965, 1069
FatI CATG 9 cut(s) 185, 258, 537, 688, 968, 1196, 1228, 1341, 1430
Fnu4HI GCNGC 2 cut(s) 1115, 1242
FokI GGATG 2 cut(s) 145, 390
FriOI GRGCYC 1 cut(s) 409
Fsp4HI GCNGC 2 cut(s) 1115, 1242
FspBI CTAG 7 cut(s) 245, 383, 599, 666, 1064, 1076, 1415
GlaI GCGC 1 cut(s) 495
GluI GCNGC 2 cut(s) 1115, 1242
GsaI CCCAGC 1 cut(s) 296
GsuI CTGGAG 1 cut(s) 570
HaeIII GGCC 1 cut(s) 687
HhaI GCGC 1 cut(s) 496
Hin1II CATG 9 cut(s) 189, 262, 541, 692, 972, 1200, 1232, 1345, 1434
Hin6I GCGC 1 cut(s) 494
HinP1I GCGC 1 cut(s) 494
HincII GTYRAC 1 cut(s) 1365
HindII GTYRAC 1 cut(s) 1365
HinfI GANTC 6 cut(s) 612, 659, 720, 903, 1287, 1353
HphI GGTGA 1 cut(s) 1213
Hpy166II GTNNAC 2 cut(s) 1267, 1365
Hpy188I TCNGA 8 cut(s) 182, 400, 425, 748, 825, 1181, 1213, 1444
Hpy188III TCNNGA 9 cut(s) 50, 538, 656, 804, 940, 1020, 1174, 1350, 1465
Hpy8I GTNNAC 2 cut(s) 1267, 1365
HpyAV CCTTC 5 cut(s) 101, 420, 626, 803, 1017
HpyCH4III ACNGT 1 cut(s) 991
HpyCH4IV ACGT 1 cut(s) 834
HpyCH4V TGCA 9 cut(s) 18, 287, 624, 710, 737, 911, 968, 1166, 1434
HpyF10VI GCNNNNNNNGC 1 cut(s) 491
HpyF3I CTNAG 6 cut(s) 143, 249, 399, 657, 1212, 1252
HpySE526I ACGT 1 cut(s) 834
Hsp92II CATG 9 cut(s) 189, 262, 541, 692, 972, 1200, 1232, 1345, 1434
HspAI GCGC 1 cut(s) 494
KpnI GGTACC 1 cut(s) 1130
Kzo9I GATC 5 cut(s) 182, 229, 1008, 1176, 1215
LmnI GCTCC 4 cut(s) 404, 551, 1187, 1238
Lsp1109I GCAGC 2 cut(s) 1101, 1228
LweI GCATC 2 cut(s) 563, 1443
MaeI CTAG 7 cut(s) 245, 383, 599, 666, 1064, 1076, 1415
MaeII ACGT 1 cut(s) 834
MaeIII GTNAC 2 cut(s) 411, 544
MalI GATC 5 cut(s) 184, 231, 1010, 1178, 1217
MboI GATC 5 cut(s) 182, 229, 1008, 1176, 1215
MboII GAAGA 6 cut(s) 97, 100, 239, 938, 1430, 1461
MfeI CAATTG 3 cut(s) 6, 126, 279
MflI RGATCY 2 cut(s) 229, 1215
MhlI GDGCHC 1 cut(s) 409
MlsI TGGCCA 1 cut(s) 687
MluNI TGGCCA 1 cut(s) 687
MlyI GAGTC 3 cut(s) 668, 714, 1296
MmeI TCCRAC 3 cut(s) 569, 619, 792
MnlI CCTC 7 cut(s) 46, 394, 506, 515, 585, 878, 1041
Mox20I TGGCCA 1 cut(s) 687
Mph1103I ATGCAT 2 cut(s) 970, 1436
MroXI GAANNNNTTC 2 cut(s) 698, 774
MscI TGGCCA 1 cut(s) 687
MseI TTAA 3 cut(s) 434, 891, 1098
Msp20I TGGCCA 1 cut(s) 687
MspA1I CMGCKG 1 cut(s) 758
MspCI CTTAAG 1 cut(s) 1097
MunI CAATTG 3 cut(s) 6, 126, 279
MwoI GCNNNNNNNGC 1 cut(s) 491
NcoI CCATGG 1 cut(s) 1196
NdeII GATC 5 cut(s) 182, 229, 1008, 1176, 1215
NheI GCTAGC 1 cut(s) 382
NlaIII CATG 9 cut(s) 189, 262, 541, 692, 972, 1200, 1232, 1345, 1434
NlaIV GGNNCC 6 cut(s) 40, 471, 955, 981, 1128, 1392
NmuCI GTSAC 1 cut(s) 411
NsiI ATGCAT 2 cut(s) 970, 1436
NspI RCATGY 3 cut(s) 972, 1345, 1434
PaeI GCATGC 1 cut(s) 1434
PaeR7I CTCGAG 1 cut(s) 940
PagI TCATGA 1 cut(s) 537
PciI ACATGT 1 cut(s) 1341
PdmI GAANNNNTTC 2 cut(s) 698, 774
PfeI GAWTC 3 cut(s) 612, 903, 1353
PkrI GCNGC 2 cut(s) 1116, 1243
Ple19I CGATCG 1 cut(s) 1179
PleI GAGTC 3 cut(s) 667, 714, 1295
PpsI GAGTC 3 cut(s) 667, 714, 1295
PpuMI RGGWCCY 1 cut(s) 979
PscI ACATGT 1 cut(s) 1341
PshBI ATTAAT 1 cut(s) 891
PsiI TTATAA 2 cut(s) 584, 1037
Psp124BI GAGCTC 1 cut(s) 409
Psp5II RGGWCCY 1 cut(s) 979
PspFI CCCAGC 1 cut(s) 292
PspN4I GGNNCC 6 cut(s) 40, 471, 955, 981, 1128, 1392
PspPI GGNCC 2 cut(s) 469, 979
PspPPI RGGWCCY 1 cut(s) 979
PsrI GAACNNNNNNTAC 2 cut(s) 106, 138
PsuI RGATCY 2 cut(s) 229, 1215
PvuI CGATCG 1 cut(s) 1179
PvuII CAGCTG 1 cut(s) 758
RsaI GTAC 2 cut(s) 118, 1128
RsaNI GTAC 2 cut(s) 117, 1127
SacI GAGCTC 1 cut(s) 409
SaqAI TTAA 3 cut(s) 434, 891, 1098
SatI GCNGC 2 cut(s) 1115, 1242
Sau3AI GATC 5 cut(s) 182, 229, 1008, 1176, 1215
Sau96I GGNCC 2 cut(s) 469, 979
ScaI AGTACT 1 cut(s) 118
SchI GAGTC 3 cut(s) 668, 714, 1296
SduI GDGCHC 1 cut(s) 409
SfaNI GCATC 2 cut(s) 563, 1443
SfcI CTRYAG 2 cut(s) 990, 1327
Sfr274I CTCGAG 1 cut(s) 940
SinI GGWCC 2 cut(s) 469, 979
SlaI CTCGAG 1 cut(s) 940
SmlI CTYRAG 3 cut(s) 50, 940, 1097
SmoI CTYRAG 3 cut(s) 50, 940, 1097
SphI GCATGC 1 cut(s) 1434
SsiI CCGC 1 cut(s) 320
SspI AATATT 1 cut(s) 477
SspMI CTAG 7 cut(s) 245, 383, 599, 666, 1064, 1076, 1415
SstI GAGCTC 1 cut(s) 409
StyI CCWWGG 2 cut(s) 1063, 1196
TaaI ACNGT 1 cut(s) 991
TaiI ACGT 1 cut(s) 837
TaqI TCGA 5 cut(s) 174, 334, 941, 1011, 1175
TatI WGTACW 1 cut(s) 116
TfiI GAWTC 3 cut(s) 612, 903, 1353
Tru1I TTAA 3 cut(s) 434, 891, 1098
Tru9I TTAA 3 cut(s) 434, 891, 1098
TscAI CASTG 1 cut(s) 20
TseFI GTSAC 1 cut(s) 411
TseI GCWGC 2 cut(s) 1114, 1241
Tsp45I GTSAC 1 cut(s) 411
TspDTI ATGAA 4 cut(s) 120, 552, 765, 1109
TspGWI ACGGA 2 cut(s) 497, 713
TspRI CASTG 1 cut(s) 20
Vha464I CTTAAG 1 cut(s) 1097
VpaK11BI GGWCC 2 cut(s) 469, 979
VspI ATTAAT 1 cut(s) 891
XceI RCATGY 3 cut(s) 972, 1345, 1434
XhoI CTCGAG 1 cut(s) 940
XmaJI CCTAGG 1 cut(s) 1063
XmnI GAANNNNTTC 2 cut(s) 698, 774
XspI CTAG 7 cut(s) 245, 383, 599, 666, 1064, 1076, 1415
ZrmI AGTACT 1 cut(s) 118
Zsp2I ATGCAT 2 cut(s) 970, 1436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.