Rmu_sc0002248.1_g000042
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002248.1
Physical Location & Seq
Reverse (-)
145423 .. 150299
4877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002248.1_g000042.1.cds

Sequence Viewer

Length: 1803 bp
atggcaattgggcagtgcagagatgttgagaacgggggaaccaatagtcttgaggatttggaacagccctttatcaaacaagagaagaaggttgatgctgattatgaagatggtagtactggttcaattgggatggttttgcttagcacatgtgttgcagtttgtggctctttcgagttcggatcatgtgtgggctattcagcacccactcaatcagctatcagggaggatctcaatctctctctagctcagttctccatgtttggctctatactgactattggtgcaatgctgggtgctatcacaagtggtaggattgcggactttcatggtcgaaagggggcaatgagcatgtcagccactttctgtattacaggatggctagccatctatttctctgagggagctttgtcacttgacataggaaggtttttaactggatatggaattggagttttctcttatgtgatcccaatatttatagcagaaatcgcgcccaaaaatctccgtggagggcttacaacattaaatcagctcatgattgttactggatcctcagtttcatttgtattaggaacaattataagttggaggacactagctatagctggaatccttccctgcattgtcttgcttgttggtctatggtttgttcccgagtcccctagatggctggcaaagattggccatgagaaagagttccaagttgcactgcaaagacttcgcggaaaatatgcagatatatctgatgaaacagctgaaataaaagaatatattgtcactctacaaagccttccaaaatccggagtgttggatttgtttcaaagcaaatacattcgtttggtgattattggagttggattgatggtatttcaacagtttggaggtattaatgggataggattctacgcaagtcaaacctttgaagaagctggtatctcaagcaaaattggaaccatagcttatgcatgtgttcaggtcccaattactgtagtgggagcaatgcttatcgataggtcaggaaggagacctcttataatggtttcagcaactggaacattcctaggctgttttctagcaggaacttctttctttcttaaggaatatggtttgctgcttaattgggtaccaacaatagctgtgtctggtgtgctgatttatattgcatttttctcaatcggaatgggagcagttccttgggtgataatgtctgagatctttccaatccatgtgaaaggagctgctggtagcttagtggtgcttgtgaactggttgggtgcttgggcagtctcttatacttacaacttccttatgagctggagttcctcaagaacttattatatgtattctggattctctttgttgactatcctatttgtggcaaagttgatattggctctattgaagtgtcttctccattttgatccggaggtgaactttcacataggagggactagagctacaagaacagccccaccctctgccatcaccaccacagcacaccactaccagcagccacagaccggcctccagcctgcccagtcggtcgcctgctctgatcccactaccgctgccggacagccagatcgatcttccggaccacagccccgcattcgaccgcaaccacagccaagcccccgtcctcgcatcaaccccgcctgtgccgatcccagcagcccactgcattgtcacctgcaatacactggcctgcagtacaccaccgagactctagcctgcgccgatcccgcctgcagcagcccgagcgactgcccagcctcggcgatccgtcgcagcccagtgtga

Protein Analysis

600

Amino Acids

64.56

Weight (kDa)

7.48

Isoelectric Point (pI)

48.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 584, 1037
AarI CACCTGC 1 cut(s) 1701
Acc36I ACCTGC 1 cut(s) 1701
Acc65I GGTACC 1 cut(s) 1126
AccB1I GGYRCC 1 cut(s) 1126
AccII CGCG 2 cut(s) 494, 726
AccIII TCCGGA 3 cut(s) 803, 1426, 1595
AciI CCGC 7 cut(s) 320, 726, 1569, 1609, 1619, 1656, 1746
AcoI YGGCCR 1 cut(s) 685
AfaI GTAC 3 cut(s) 118, 1128, 1715
AfiI CCNNNNNNNGG 5 cut(s) 669, 803, 1378, 1523, 1777
AflII CTTAAG 1 cut(s) 1097
AflIII ACRYGT 1 cut(s) 149
AgsI TTSAA 5 cut(s) 126, 824, 875, 926, 1405
Alw26I GTCTC 3 cut(s) 1021, 1294, 1718
AlwNI CAGNNNCTG 1 cut(s) 1052
Ama87I CYCGRG 2 cut(s) 656, 1759
Aor13HI TCCGGA 3 cut(s) 803, 1426, 1595
AoxI GGCC 3 cut(s) 685, 1525, 1705
ApeKI GCWGC 8 cut(s) 1114, 1241, 1513, 1571, 1674, 1752, 1755, 1791
AseI ATTAAT 1 cut(s) 891
Asp700I GAANNNNTTC 1 cut(s) 698
Asp718I GGTACC 1 cut(s) 1126
AspA2I CCTAGG 1 cut(s) 1063
AspLEI GCGC 2 cut(s) 496, 1739
AspS9I GGNCC 2 cut(s) 979, 1598
AsuHPI GGTGA 5 cut(s) 856, 1213, 1444, 1480, 1682
AsuNHI GCTAGC 1 cut(s) 382
AvaI CYCGRG 2 cut(s) 656, 1759
AvaII GGWCC 2 cut(s) 979, 1598
AvrII CCTAGG 1 cut(s) 1063
BalI TGGCCA 1 cut(s) 687
BamHI GGATCC 1 cut(s) 551
BanI GGYRCC 1 cut(s) 1126
BbsI GAAGAC 1 cut(s) 1403
BbvI GCAGC 7 cut(s) 1101, 1228, 1525, 1558, 1686, 1764, 1767
BccI CCATC 7 cut(s) 104, 127, 372, 395, 663, 859, 1493
BcgI CGANNNNNNTGC 2 cut(s) 704, 738
BcoDI GTCTC 3 cut(s) 1021, 1294, 1718
BfaI CTAG 8 cut(s) 245, 383, 599, 666, 1064, 1076, 1455, 1730
BfmI CTRYAG 4 cut(s) 603, 990, 1709, 1750
BfrI CTTAAG 1 cut(s) 1097
BfuAI ACCTGC 1 cut(s) 1701
BglII AGATCT 1 cut(s) 1215
BisI GCNGC 8 cut(s) 1115, 1242, 1514, 1572, 1675, 1753, 1756, 1792
BlnI CCTAGG 1 cut(s) 1063
BlpI GCTNAGC 1 cut(s) 143
BlsI GCNGC 8 cut(s) 1116, 1243, 1515, 1573, 1676, 1754, 1757, 1793
BmcAI AGTACT 1 cut(s) 118
Bme18I GGWCC 2 cut(s) 979, 1598
BmeT110I CYCGRG 2 cut(s) 656, 1759
BmgT120I GGNCC 2 cut(s) 979, 1598
BmiI GGNNCC 5 cut(s) 40, 553, 955, 981, 1128
BmrI ACTGGG 2 cut(s) 1534, 1790
BmsI GCATC 2 cut(s) 85, 1656
BmtI GCTAGC 1 cut(s) 386
BmuI ACTGGG 2 cut(s) 1534, 1790
BpiI GAAGAC 1 cut(s) 1403
BpmI CTGGAG 2 cut(s) 1339, 1514
Bpu1102I GCTNAGC 1 cut(s) 143
BpuEI CTTGAG 3 cut(s) 71, 925, 1312
Bsa29I ATCGAT 2 cut(s) 1011, 1588
BsaBI GATNNNNATC 1 cut(s) 234
BsaI GGTCTC 1 cut(s) 1021
BsaJI CCNNGG 4 cut(s) 508, 1063, 1196, 1776
BsaWI WCCGGW 3 cut(s) 803, 1426, 1595
Bsc4I CCNNNNNNNGG 5 cut(s) 669, 803, 1378, 1523, 1777
Bse118I RCCGGY 1 cut(s) 1523
Bse1I ACTGG 8 cut(s) 124, 442, 553, 1057, 1274, 1540, 1708, 1796
Bse3DI GCAATG 3 cut(s) 294, 351, 1008
Bse8I GATNNNNATC 1 cut(s) 234
BseAI TCCGGA 3 cut(s) 803, 1426, 1595
BseCI ATCGAT 2 cut(s) 1011, 1588
BseDI CCNNGG 4 cut(s) 508, 1063, 1196, 1776
BseGI GGATG 2 cut(s) 138, 383
BseJI GATNNNNATC 1 cut(s) 234
BseLI CCNNNNNNNGG 5 cut(s) 669, 803, 1378, 1523, 1777
BseMI GCAATG 3 cut(s) 294, 351, 1008
BseMII CTCAG 4 cut(s) 263, 390, 570, 1203
BseNI ACTGG 8 cut(s) 124, 442, 553, 1057, 1274, 1540, 1708, 1796
BseXI GCAGC 7 cut(s) 1101, 1228, 1525, 1558, 1686, 1764, 1767
BseYI CCCAGC 3 cut(s) 292, 1670, 1771
BsgI GTGCAG 1 cut(s) 37
Bsh1236I CGCG 2 cut(s) 494, 726
Bsh1285I CGRYCG 2 cut(s) 1548, 1619
BshFI GGCC 3 cut(s) 687, 1527, 1707
BshNI GGYRCC 1 cut(s) 1126
BshVI ATCGAT 2 cut(s) 1011, 1588
BsiEI CGRYCG 2 cut(s) 1548, 1619
BsiHKCI CYCGRG 2 cut(s) 656, 1759
BsiSI CCGG 5 cut(s) 804, 1427, 1524, 1575, 1596
BslFI GGGAC 3 cut(s) 646, 965, 1465
BslI CCNNNNNNNGG 5 cut(s) 669, 803, 1378, 1523, 1777
BsmAI GTCTC 3 cut(s) 1021, 1294, 1718
BsmFI GGGAC 3 cut(s) 646, 965, 1465
BsmI GAATGC 1 cut(s) 1611
BsnI GGCC 3 cut(s) 687, 1527, 1707
Bso31I GGTCTC 1 cut(s) 1021
BsoBI CYCGRG 2 cut(s) 656, 1759
Bsp13I TCCGGA 3 cut(s) 803, 1426, 1595
Bsp1720I GCTNAGC 1 cut(s) 143
BspACI CCGC 7 cut(s) 320, 726, 1569, 1609, 1619, 1656, 1746
BspANI GGCC 3 cut(s) 687, 1527, 1707
BspCNI CTCAG 4 cut(s) 262, 391, 569, 1204
BspDI ATCGAT 2 cut(s) 1011, 1588
BspEI TCCGGA 3 cut(s) 803, 1426, 1595
BspFNI CGCG 2 cut(s) 494, 726
BspHI TCATGA 1 cut(s) 537
BspLI GGNNCC 5 cut(s) 40, 553, 955, 981, 1128
BspMAI CTGCAG 2 cut(s) 1713, 1754
BspMI ACCTGC 1 cut(s) 1701
BspOI GCTAGC 1 cut(s) 386
BspT107I GGYRCC 1 cut(s) 1126
BspTI CTTAAG 1 cut(s) 1097
BspTNI GGTCTC 1 cut(s) 1021
BsrDI GCAATG 3 cut(s) 294, 351, 1008
BsrFI RCCGGY 1 cut(s) 1523
BsrI ACTGG 8 cut(s) 124, 442, 553, 1057, 1274, 1540, 1708, 1796
BssAI RCCGGY 1 cut(s) 1523
BssECI CCNNGG 4 cut(s) 508, 1063, 1196, 1776
BssT1I CCWWGG 2 cut(s) 1063, 1196
Bst4CI ACNGT 2 cut(s) 879, 991
BstAFI CTTAAG 1 cut(s) 1097
BstC8I GCNNGC 7 cut(s) 384, 675, 1536, 1552, 1709, 1735, 1750
BstDEI CTNAG 6 cut(s) 143, 249, 399, 556, 1212, 1252
BstDSI CCRYGG 1 cut(s) 508
BstF5I GGATG 2 cut(s) 138, 383
BstFNI CGCG 2 cut(s) 494, 726
BstHHI GCGC 2 cut(s) 496, 1739
BstMAI GTCTC 3 cut(s) 1021, 1294, 1718
BstMCI CGRYCG 2 cut(s) 1548, 1619
BstMWI GCNNNNNNNGC 4 cut(s) 491, 1627, 1745, 1761
BstNSI RCATGY 3 cut(s) 153, 355, 972
BstSFI CTRYAG 4 cut(s) 603, 990, 1709, 1750
BstUI CGCG 2 cut(s) 494, 726
BstV1I GCAGC 7 cut(s) 1101, 1228, 1525, 1558, 1686, 1764, 1767
BstV2I GAAGAC 1 cut(s) 1403
BstX2I RGATCY 3 cut(s) 229, 551, 1215
BstYI RGATCY 3 cut(s) 229, 551, 1215
Bsu15I ATCGAT 2 cut(s) 1011, 1588
BsuRI GGCC 3 cut(s) 687, 1527, 1707
BsuTUI ATCGAT 2 cut(s) 1011, 1588
BtgI CCRYGG 1 cut(s) 508
BtsCI GGATG 2 cut(s) 138, 383
BtsI GCAGTG 3 cut(s) 20, 710, 1679
BtsIMutI CAGTG 5 cut(s) 20, 710, 1679, 1701, 1803
BveI ACCTGC 1 cut(s) 1701
Cac8I GCNNGC 7 cut(s) 384, 675, 1536, 1552, 1709, 1735, 1750
CaiI CAGNNNCTG 1 cut(s) 1052
CciI TCATGA 1 cut(s) 537
CfoI GCGC 2 cut(s) 496, 1739
Cfr10I RCCGGY 1 cut(s) 1523
Cfr13I GGNCC 2 cut(s) 979, 1598
ClaI ATCGAT 2 cut(s) 1011, 1588
Csp6I GTAC 3 cut(s) 117, 1127, 1714
CviAII CATG 9 cut(s) 150, 186, 259, 329, 352, 538, 689, 969, 1229
CviQI GTAC 3 cut(s) 117, 1127, 1714
DdeI CTNAG 6 cut(s) 143, 249, 399, 556, 1212, 1252
EaeI YGGCCR 1 cut(s) 685
Eco130I CCWWGG 2 cut(s) 1063, 1196
Eco31I GGTCTC 1 cut(s) 1021
Eco47I GGWCC 2 cut(s) 979, 1598
Eco88I CYCGRG 2 cut(s) 656, 1759
EcoO109I RGGNCCY 1 cut(s) 979
EcoT14I CCWWGG 2 cut(s) 1063, 1196
EcoT22I ATGCAT 1 cut(s) 970
ErhI CCWWGG 2 cut(s) 1063, 1196
FaeI CATG 9 cut(s) 153, 189, 262, 332, 355, 541, 692, 972, 1232
FaqI GGGAC 3 cut(s) 646, 965, 1465
FatI CATG 9 cut(s) 149, 185, 258, 328, 351, 537, 688, 968, 1228
FauI CCCGC 3 cut(s) 1616, 1663, 1753
Fnu4HI GCNGC 8 cut(s) 1115, 1242, 1514, 1572, 1675, 1753, 1756, 1792
FokI GGATG 2 cut(s) 145, 390
Fsp4HI GCNGC 8 cut(s) 1115, 1242, 1514, 1572, 1675, 1753, 1756, 1792
FspBI CTAG 8 cut(s) 245, 383, 599, 666, 1064, 1076, 1455, 1730
GlaI GCGC 2 cut(s) 495, 1738
GluI GCNGC 8 cut(s) 1115, 1242, 1514, 1572, 1675, 1753, 1756, 1792
GsaI CCCAGC 3 cut(s) 296, 1674, 1775
GsuI CTGGAG 2 cut(s) 1339, 1514
HaeIII GGCC 3 cut(s) 687, 1527, 1707
HapII CCGG 5 cut(s) 804, 1427, 1524, 1575, 1596
HhaI GCGC 2 cut(s) 496, 1739
Hin1II CATG 9 cut(s) 153, 189, 262, 332, 355, 541, 692, 972, 1232
Hin6I GCGC 2 cut(s) 494, 1737
HinP1I GCGC 2 cut(s) 494, 1737
HincII GTYRAC 1 cut(s) 1365
HindII GTYRAC 1 cut(s) 1365
HinfI GANTC 5 cut(s) 612, 659, 903, 1353, 1726
HpaII CCGG 5 cut(s) 804, 1427, 1524, 1575, 1596
HphI GGTGA 5 cut(s) 856, 1213, 1444, 1480, 1682
Hpy166II GTNNAC 4 cut(s) 1267, 1365, 1435, 1716
Hpy188I TCNGA 6 cut(s) 182, 400, 748, 1181, 1213, 1558
Hpy188III TCNNGA 9 cut(s) 50, 538, 656, 804, 1020, 1329, 1350, 1427, 1596
Hpy8I GTNNAC 4 cut(s) 1267, 1365, 1435, 1716
Hpy99I CGWCG 1 cut(s) 1791
HpyAV CCTTC 5 cut(s) 82, 420, 626, 803, 1017
HpyCH4III ACNGT 2 cut(s) 879, 991
HpyF10VI GCNNNNNNNGC 4 cut(s) 491, 1627, 1745, 1761
HpyF3I CTNAG 6 cut(s) 143, 249, 399, 556, 1212, 1252
Hsp92II CATG 9 cut(s) 153, 189, 262, 332, 355, 541, 692, 972, 1232
HspAI GCGC 2 cut(s) 494, 1737
Kpn2I TCCGGA 3 cut(s) 803, 1426, 1595
KpnI GGTACC 1 cut(s) 1130
LmnI GCTCC 4 cut(s) 404, 998, 1187, 1238
Lsp1109I GCAGC 7 cut(s) 1101, 1228, 1525, 1558, 1686, 1764, 1767
LweI GCATC 2 cut(s) 85, 1656
MaeI CTAG 8 cut(s) 245, 383, 599, 666, 1064, 1076, 1455, 1730
MaeIII GTNAC 4 cut(s) 411, 544, 778, 1688
MboII GAAGA 5 cut(s) 97, 119, 938, 1403, 1584
MfeI CAATTG 2 cut(s) 6, 126
MflI RGATCY 3 cut(s) 229, 551, 1215
MlsI TGGCCA 1 cut(s) 687
MluCI AATT 7 cut(s) 6, 126, 447, 579, 948, 984, 1120
MluNI TGGCCA 1 cut(s) 687
MlyI GAGTC 2 cut(s) 668, 1720
MmeI TCCRAC 3 cut(s) 569, 792, 838
Mox20I TGGCCA 1 cut(s) 687
Mph1103I ATGCAT 1 cut(s) 970
MroI TCCGGA 3 cut(s) 803, 1426, 1595
MroXI GAANNNNTTC 1 cut(s) 698
MscI TGGCCA 1 cut(s) 687
MseI TTAA 5 cut(s) 434, 527, 891, 1098, 1119
Msp20I TGGCCA 1 cut(s) 687
MspA1I CMGCKG 2 cut(s) 758, 1571
MspCI CTTAAG 1 cut(s) 1097
MspI CCGG 5 cut(s) 804, 1427, 1524, 1575, 1596
MunI CAATTG 2 cut(s) 6, 126
Mva1269I GAATGC 1 cut(s) 1611
MvnI CGCG 2 cut(s) 494, 726
MwoI GCNNNNNNNGC 4 cut(s) 491, 1627, 1745, 1761
NheI GCTAGC 1 cut(s) 382
NlaIII CATG 9 cut(s) 153, 189, 262, 332, 355, 541, 692, 972, 1232
NlaIV GGNNCC 5 cut(s) 40, 553, 955, 981, 1128
NmeAIII GCCGAG 1 cut(s) 1757
NmuCI GTSAC 3 cut(s) 411, 778, 1688
NsiI ATGCAT 1 cut(s) 970
NspI RCATGY 3 cut(s) 153, 355, 972
PagI TCATGA 1 cut(s) 537
PaqCI CACCTGC 1 cut(s) 1701
PciI ACATGT 1 cut(s) 149
PctI GAATGC 1 cut(s) 1611
PdmI GAANNNNTTC 1 cut(s) 698
PfeI GAWTC 3 cut(s) 612, 903, 1353
PkrI GCNGC 8 cut(s) 1116, 1243, 1515, 1573, 1676, 1754, 1757, 1793
PleI GAGTC 2 cut(s) 667, 1720
PpsI GAGTC 2 cut(s) 667, 1720
PpuMI RGGWCCY 1 cut(s) 979
PscI ACATGT 1 cut(s) 149
PshBI ATTAAT 1 cut(s) 891
PsiI TTATAA 2 cut(s) 584, 1037
Psp5II RGGWCCY 1 cut(s) 979
PspFI CCCAGC 3 cut(s) 292, 1670, 1771
PspN4I GGNNCC 5 cut(s) 40, 553, 955, 981, 1128
PspPI GGNCC 2 cut(s) 979, 1598
PspPPI RGGWCCY 1 cut(s) 979
PsrI GAACNNNNNNTAC 2 cut(s) 106, 138
PstI CTGCAG 2 cut(s) 1713, 1754
PstNI CAGNNNCTG 1 cut(s) 1052
PsuI RGATCY 3 cut(s) 229, 551, 1215
PvuII CAGCTG 1 cut(s) 758
RsaI GTAC 3 cut(s) 118, 1128, 1715
RsaNI GTAC 3 cut(s) 117, 1127, 1714
SaqAI TTAA 5 cut(s) 434, 527, 891, 1098, 1119
SatI GCNGC 8 cut(s) 1115, 1242, 1514, 1572, 1675, 1753, 1756, 1792
Sau96I GGNCC 2 cut(s) 979, 1598
ScaI AGTACT 1 cut(s) 118
SchI GAGTC 2 cut(s) 668, 1720
SfaNI GCATC 2 cut(s) 85, 1656
SfcI CTRYAG 4 cut(s) 603, 990, 1709, 1750
SinI GGWCC 2 cut(s) 979, 1598
SmlI CTYRAG 4 cut(s) 50, 940, 1097, 1327
SmoI CTYRAG 4 cut(s) 50, 940, 1097, 1327
Sse9I AATT 7 cut(s) 6, 126, 447, 579, 948, 984, 1120
SsiI CCGC 7 cut(s) 320, 726, 1569, 1609, 1619, 1656, 1746
SspI AATATT 1 cut(s) 477
SspMI CTAG 8 cut(s) 245, 383, 599, 666, 1064, 1076, 1455, 1730
StyI CCWWGG 2 cut(s) 1063, 1196
TaaI ACNGT 2 cut(s) 879, 991
TaqI TCGA 5 cut(s) 174, 334, 1011, 1588, 1615
TaqII GACCGA 1 cut(s) 1534
TasI AATT 7 cut(s) 6, 126, 447, 579, 948, 984, 1120
TatI WGTACW 2 cut(s) 116, 1713
TfiI GAWTC 3 cut(s) 612, 903, 1353
Tru1I TTAA 5 cut(s) 434, 527, 891, 1098, 1119
Tru9I TTAA 5 cut(s) 434, 527, 891, 1098, 1119
TscAI CASTG 5 cut(s) 20, 717, 1686, 1708, 1803
TseFI GTSAC 3 cut(s) 411, 778, 1688
TseI GCWGC 8 cut(s) 1114, 1241, 1513, 1571, 1674, 1752, 1755, 1791
Tsp45I GTSAC 3 cut(s) 411, 778, 1688
TspDTI ATGAA 4 cut(s) 120, 317, 552, 765
TspGWI ACGGA 2 cut(s) 497, 1775
TspRI CASTG 5 cut(s) 20, 717, 1686, 1708, 1803
Vha464I CTTAAG 1 cut(s) 1097
VpaK11BI GGWCC 2 cut(s) 979, 1598
VspI ATTAAT 1 cut(s) 891
XceI RCATGY 3 cut(s) 153, 355, 972
XmaJI CCTAGG 1 cut(s) 1063
XmnI GAANNNNTTC 1 cut(s) 698
XspI CTAG 8 cut(s) 245, 383, 599, 666, 1064, 1076, 1455, 1730
ZrmI AGTACT 1 cut(s) 118
Zsp2I ATGCAT 1 cut(s) 970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.