Rh4AG225700
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
52658909 .. 52663988
5080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG225700.1

Sequence Viewer

Length: 1455 bp
ATGGGAAAGAAGTCGACAGACATTGAAAATGGGGGTATTAATAGGCATGAGGAGTTGGAGCAGCCTTTCATTCAGCCAAAGAGAGTTGTTGCTCATGAAGATGGTGACAGCGGGAATACTATCAAAAATGGATCAATTGGGATGGTTTTGCTTAGCACAGGCGTTGCAGTTTGCGGCTCTTTCCAATTTGGAATATGTGTGGGCTATTCAGCACCCAGTCAATCTGCTATCAGGAAAGATCTTCGTCTCTCTATAACTGAGTATTCCATGTTTGGCTCTATCCTATCAATTGGTGCAGTGTTGGGTGCTTTTACAAGTGGTAAGATTGCAGATTCTCTCGGCCGAAAAGGGGCAATGTGGGTGTCTTCTGTCATTTGCACTGCAGGATGGCTAGCCATCTACTTCGCTCAGGGAGCTACATTACTTGATATAGGAAGGTTTCTAACTGGTTATGGAATTTCATCTTTCTCGTATGTGGTCCCAGTATTTATAGCCGAAATAGCGCCCAAAAATCTCCGTGGAGGGCTTGCAACATTGAATCAGCTCTTCATTATCCTTGGAGCATCGTTTACGTTCATAATAGGAACAATCTTATCCTGGAGAACATTATCTCTAATCGCAATTTTGCCTTGCATTATCCTGGTTTTGGGTCAATGGTTTATTCCAGAGTCACCTAGATGGCTGGCAAAGGTCGGCCGAGAGGAAGAATTTGAAGTTGCACTACAGAGGCTCCATGGAAAAGATGCTGATGTATCTGGTGAAAAGGCGGAAATTCAAGAATACATAGTTACTTCACAAAGTCTTCCGAAAGCCAATATCTTGGATTTGTTTCAAAGAAGATATATTCGATCTGTCATAATTGGGGTTGGATTAATGGTCTTTCAACAATTTGCTGGTATTAACGGAGTACAATTTTATGCAAGCGAAACCTTTGAAGCAGCTGGATTTTCAGGCAGTATTGGAACCACAGCTTATGCATGTCTTCAGGTCCCAATCACTCTATTAGGAGCATTTCTAATGGATAAGTCAGGAAGGAGAGTTCTCGTAATGGTTTCAGCAGCTGGAATGTTCATAGGCTCTATTCTTGTTGGAATTTCTTTCTCTCTGAAGGGAGATGGTTTGCTACTGGATTGGGTACCGATACTTGCTGTGTCCGGTGTGCTGGTTTACGTTGCATTTTTTTCGATTGGTATGGGAGCAGGACCTTGGGTGATAATGTCCGAGATTTTCCCAATTAATGTGAAGGGAGTGGGTGGAAGCTTGGTGGTGTTTGTGAACTGGTCTGGTGCTTGGGTAGTTTCCTATACTTACAACTCTCTTATGAACTGGAGTTCCTCAGGAACATACTACCTGTATGGTGCAGTCTGTGTCTTGACAATCCTATTTGTGGCCAAGGTAGTACCAGAGACCAAAGGAAAAACACTAGAAGAAATTCAAGCATCACTCAATCCATGA

Protein Analysis

484

Amino Acids

51.99

Weight (kDa)

7.55

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 58 - 429 1.6e-25 Major Facilitator Superfamily
Sugar_tr PF00083 84 - 480 1.1e-89 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1135
AccB1I GGYRCC 1 cut(s) 1135
AccI GTMKAC 1 cut(s) 14
AciI CCGC 3 cut(s) 111, 174, 767
AclWI GGATC 1 cut(s) 139
AcoI YGGCCR 3 cut(s) 340, 694, 1389
AcsI RAATTY 5 cut(s) 456, 707, 771, 1092, 1431
AcuI CTGAAG 2 cut(s) 968, 1127
AfaI GTAC 3 cut(s) 909, 1137, 1401
AfiI CCNNNNNNNGG 3 cut(s) 349, 646, 1387
AgsI TTSAA 8 cut(s) 26, 538, 713, 776, 833, 884, 935, 1436
AjnI CCWGG 2 cut(s) 596, 639
AloI GAACNNNNNNTCC 4 cut(s) 1023, 1055, 1316, 1348
AluBI AGCT 6 cut(s) 416, 544, 941, 971, 1061, 1260
AluI AGCT 6 cut(s) 416, 544, 941, 971, 1061, 1260
Alw26I GTCTC 2 cut(s) 251, 1400
AlwI GGATC 1 cut(s) 139
AlwNI CAGNNNCTG 1 cut(s) 1061
AoxI GGCC 3 cut(s) 340, 694, 1389
ApeKI GCWGC 3 cut(s) 61, 938, 1058
ApoI RAATTY 5 cut(s) 456, 707, 771, 1092, 1431
AseI ATTAAT 3 cut(s) 39, 872, 1236
Asp700I GAANNNNTTC 1 cut(s) 1431
Asp718I GGTACC 1 cut(s) 1135
AspLEI GCGC 1 cut(s) 505
AspS9I GGNCC 3 cut(s) 478, 988, 1202
AsuHPI GGTGA 4 cut(s) 116, 663, 770, 1222
AsuNHI GCTAGC 1 cut(s) 391
AvaII GGWCC 3 cut(s) 478, 988, 1202
AxyI CCTNAGG 1 cut(s) 1336
BalI TGGCCA 1 cut(s) 1391
BanI GGYRCC 1 cut(s) 1135
BarI GAAGNNNNNNTAC 2 cut(s) 705, 737
BbsI GAAGAC 3 cut(s) 357, 794, 974
BbvI GCAGC 3 cut(s) 73, 950, 1070
BccI CCATC 6 cut(s) 95, 136, 381, 404, 672, 1109
BcgI CGANNNNNNTGC 2 cut(s) 1164, 1198
BciT130I CCWGG 2 cut(s) 598, 641
BcoDI GTCTC 2 cut(s) 251, 1400
BfaI CTAG 3 cut(s) 392, 675, 1424
BfmI CTRYAG 2 cut(s) 381, 722
BfoI RGCGCY 1 cut(s) 506
BglII AGATCT 1 cut(s) 238
BisI GCNGC 4 cut(s) 62, 175, 939, 1059
BlpI GCTNAGC 1 cut(s) 152
BlsI GCNGC 4 cut(s) 63, 176, 940, 1060
Bme1390I CCNGG 2 cut(s) 598, 641
Bme18I GGWCC 3 cut(s) 478, 988, 1202
BmgT120I GGNCC 3 cut(s) 478, 988, 1202
BmiI GGNNCC 5 cut(s) 480, 731, 964, 990, 1137
BmrFI CCNGG 2 cut(s) 598, 641
BmrI ACTGGG 2 cut(s) 210, 476
BmsI GCATC 3 cut(s) 572, 733, 1448
BmtI GCTAGC 1 cut(s) 395
BmuI ACTGGG 2 cut(s) 210, 476
BpiI GAAGAC 3 cut(s) 357, 794, 974
BpmI CTGGAG 2 cut(s) 619, 1348
Bpu10I CCTNAGC 1 cut(s) 408
Bpu1102I GCTNAGC 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 1400
BsaJI CCNNGG 5 cut(s) 517, 556, 733, 1205, 1392
BsaWI WCCGGW 1 cut(s) 1154
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bsc4I CCNNNNNNNGG 3 cut(s) 349, 646, 1387
Bse1I ACTGG 6 cut(s) 216, 451, 482, 1131, 1283, 1331
Bse21I CCTNAGG 1 cut(s) 1336
Bse3DI GCAATG 1 cut(s) 360
BseBI CCWGG 2 cut(s) 598, 641
BseDI CCNNGG 5 cut(s) 517, 556, 733, 1205, 1392
BseGI GGATG 2 cut(s) 147, 392
BseLI CCNNNNNNNGG 3 cut(s) 349, 646, 1387
BseMI GCAATG 1 cut(s) 360
BseMII CTCAG 3 cut(s) 249, 422, 1350
BseNI ACTGG 6 cut(s) 216, 451, 482, 1131, 1283, 1331
BseRI GAGGAG 1 cut(s) 65
BseX3I CGGCCG 2 cut(s) 340, 694
BseXI GCAGC 3 cut(s) 73, 950, 1070
BsgI GTGCAG 2 cut(s) 315, 1380
Bsh1285I CGRYCG 2 cut(s) 343, 697
BshFI GGCC 3 cut(s) 342, 696, 1391
BshNI GGYRCC 1 cut(s) 1135
BsiEI CGRYCG 2 cut(s) 343, 697
BsiSI CCGG 1 cut(s) 1155
BslFI GGGAC 2 cut(s) 464, 974
BslI CCNNNNNNNGG 3 cut(s) 349, 646, 1387
BsmAI GTCTC 2 cut(s) 251, 1400
BsmBI CGTCTC 1 cut(s) 251
BsmFI GGGAC 2 cut(s) 464, 974
BsnI GGCC 3 cut(s) 342, 696, 1391
Bso31I GGTCTC 1 cut(s) 1400
Bsp143I GATC 3 cut(s) 131, 238, 848
Bsp1720I GCTNAGC 1 cut(s) 152
Bsp19I CCATGG 1 cut(s) 733
BspACI CCGC 3 cut(s) 111, 174, 767
BspANI GGCC 3 cut(s) 342, 696, 1391
BspCNI CTCAG 3 cut(s) 250, 421, 1349
BspHI TCATGA 1 cut(s) 94
BspLI GGNNCC 5 cut(s) 480, 731, 964, 990, 1137
BspMAI CTGCAG 1 cut(s) 385
BspOI GCTAGC 1 cut(s) 395
BspPI GGATC 1 cut(s) 139
BspQI GCTCTTC 1 cut(s) 551
BspT107I GGYRCC 1 cut(s) 1135
BspTNI GGTCTC 1 cut(s) 1400
BsrDI GCAATG 1 cut(s) 360
BsrI ACTGG 6 cut(s) 216, 451, 482, 1131, 1283, 1331
BssECI CCNNGG 5 cut(s) 517, 556, 733, 1205, 1392
BssMI GATC 3 cut(s) 131, 238, 848
BssT1I CCWWGG 4 cut(s) 556, 733, 1205, 1392
Bst2UI CCWGG 2 cut(s) 598, 641
Bst6I CTCTTC 1 cut(s) 551
BstC8I GCNNGC 4 cut(s) 393, 528, 684, 922
BstDEI CTNAG 4 cut(s) 152, 258, 408, 1336
BstDSI CCRYGG 2 cut(s) 517, 733
BstF5I GGATG 2 cut(s) 147, 392
BstH2I RGCGCY 1 cut(s) 506
BstHHI GCGC 1 cut(s) 505
BstKTI GATC 3 cut(s) 134, 241, 851
BstMAI GTCTC 2 cut(s) 251, 1400
BstMBI GATC 3 cut(s) 131, 238, 848
BstMCI CGRYCG 2 cut(s) 343, 697
BstMWI GCNNNNNNNGC 2 cut(s) 413, 500
BstNI CCWGG 2 cut(s) 598, 641
BstNSI RCATGY 1 cut(s) 981
BstSCI CCNGG 2 cut(s) 596, 639
BstSFI CTRYAG 2 cut(s) 381, 722
BstV1I GCAGC 3 cut(s) 73, 950, 1070
BstV2I GAAGAC 3 cut(s) 357, 794, 974
BstX2I RGATCY 1 cut(s) 238
BstXI CCANNNNNNTGG 1 cut(s) 820
BstYI RGATCY 1 cut(s) 238
BstZI CGGCCG 2 cut(s) 340, 694
Bsu36I CCTNAGG 1 cut(s) 1336
BsuRI GGCC 3 cut(s) 342, 696, 1391
BtgI CCRYGG 2 cut(s) 517, 733
BtsCI GGATG 2 cut(s) 147, 392
BtsI GCAGTG 2 cut(s) 303, 378
BtsIMutI CAGTG 2 cut(s) 303, 378
Cac8I GCNNGC 4 cut(s) 393, 528, 684, 922
CaiI CAGNNNCTG 1 cut(s) 1061
CciI TCATGA 1 cut(s) 94
CfoI GCGC 1 cut(s) 505
Cfr13I GGNCC 3 cut(s) 478, 988, 1202
Csp6I GTAC 3 cut(s) 908, 1136, 1400
CviAII CATG 6 cut(s) 47, 95, 268, 734, 978, 1452
CviQI GTAC 3 cut(s) 908, 1136, 1400
DdeI CTNAG 4 cut(s) 152, 258, 408, 1336
DpnI GATC 3 cut(s) 133, 240, 850
DpnII GATC 3 cut(s) 131, 238, 848
EaeI YGGCCR 3 cut(s) 340, 694, 1389
EagI CGGCCG 2 cut(s) 340, 694
Eam1104I CTCTTC 1 cut(s) 551
EarI CTCTTC 1 cut(s) 551
EciI GGCGGA 1 cut(s) 782
EclXI CGGCCG 2 cut(s) 340, 694
Eco130I CCWWGG 4 cut(s) 556, 733, 1205, 1392
Eco31I GGTCTC 1 cut(s) 1400
Eco47I GGWCC 3 cut(s) 478, 988, 1202
Eco52I CGGCCG 2 cut(s) 340, 694
Eco57I CTGAAG 2 cut(s) 968, 1127
Eco81I CCTNAGG 1 cut(s) 1336
EcoO109I RGGNCCY 2 cut(s) 988, 1202
EcoRII CCWGG 2 cut(s) 596, 639
EcoT14I CCWWGG 4 cut(s) 556, 733, 1205, 1392
EcoT22I ATGCAT 1 cut(s) 979
ErhI CCWWGG 4 cut(s) 556, 733, 1205, 1392
Esp3I CGTCTC 1 cut(s) 251
FaeI CATG 6 cut(s) 50, 98, 271, 737, 981, 1455
FaqI GGGAC 2 cut(s) 464, 974
FatI CATG 6 cut(s) 46, 94, 267, 733, 977, 1451
FauI CCCGC 1 cut(s) 104
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 4 cut(s) 62, 175, 939, 1059
FokI GGATG 2 cut(s) 154, 399
Fsp4HI GCNGC 4 cut(s) 62, 175, 939, 1059
FspBI CTAG 3 cut(s) 392, 675, 1424
GlaI GCGC 1 cut(s) 504
GluI GCNGC 4 cut(s) 62, 175, 939, 1059
GsuI CTGGAG 2 cut(s) 619, 1348
HaeII RGCGCY 1 cut(s) 506
HaeIII GGCC 3 cut(s) 342, 696, 1391
HapII CCGG 1 cut(s) 1155
HhaI GCGC 1 cut(s) 505
Hin1II CATG 6 cut(s) 50, 98, 271, 737, 981, 1455
Hin6I GCGC 1 cut(s) 503
HinP1I GCGC 1 cut(s) 503
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HindIII AAGCTT 1 cut(s) 1258
HinfI GANTC 3 cut(s) 332, 538, 668
HpaII CCGG 1 cut(s) 1155
HphI GGTGA 4 cut(s) 116, 663, 770, 1222
Hpy166II GTNNAC 4 cut(s) 15, 570, 1168, 1276
Hpy188I TCNGA 3 cut(s) 807, 1107, 1222
Hpy188III TCNNGA 7 cut(s) 95, 232, 665, 776, 1029, 1338, 1372
Hpy8I GTNNAC 4 cut(s) 15, 570, 1168, 1276
HpyAV CCTTC 4 cut(s) 429, 1026, 1102, 1237
HpyCH4IV ACGT 2 cut(s) 572, 1170
HpyF10VI GCNNNNNNNGC 2 cut(s) 413, 500
HpyF3I CTNAG 4 cut(s) 152, 258, 408, 1336
HpySE526I ACGT 2 cut(s) 572, 1170
Hsp92II CATG 6 cut(s) 50, 98, 271, 737, 981, 1455
HspAI GCGC 1 cut(s) 503
KpnI GGTACC 1 cut(s) 1139
Kzo9I GATC 3 cut(s) 131, 238, 848
LguI GCTCTTC 1 cut(s) 551
LmnI GCTCC 6 cut(s) 58, 413, 560, 735, 1007, 1196
Lsp1109I GCAGC 3 cut(s) 73, 950, 1070
LweI GCATC 3 cut(s) 572, 733, 1448
MaeI CTAG 3 cut(s) 392, 675, 1424
MaeII ACGT 2 cut(s) 572, 1170
MaeIII GTNAC 3 cut(s) 104, 669, 787
MalI GATC 3 cut(s) 133, 240, 850
MboI GATC 3 cut(s) 131, 238, 848
MboII GAAGA 9 cut(s) 110, 233, 357, 538, 716, 794, 849, 974, 1439
MfeI CAATTG 2 cut(s) 135, 288
MflI RGATCY 1 cut(s) 238
MlsI TGGCCA 1 cut(s) 1391
MluNI TGGCCA 1 cut(s) 1391
MlyI GAGTC 1 cut(s) 677
MmeI TCCRAC 3 cut(s) 36, 847, 1069
MnlI CCTC 5 cut(s) 43, 515, 694, 720, 1345
Mox20I TGGCCA 1 cut(s) 1391
Mph1103I ATGCAT 1 cut(s) 979
MroXI GAANNNNTTC 1 cut(s) 1431
MscI TGGCCA 1 cut(s) 1391
MseI TTAA 4 cut(s) 39, 872, 900, 1236
MslI CAYNNNNRTG 2 cut(s) 99, 676
Msp20I TGGCCA 1 cut(s) 1391
MspA1I CMGCKG 3 cut(s) 111, 941, 1061
MspI CCGG 1 cut(s) 1155
MspR9I CCNGG 2 cut(s) 598, 641
MunI CAATTG 2 cut(s) 135, 288
MvaI CCWGG 2 cut(s) 598, 641
MwoI GCNNNNNNNGC 2 cut(s) 413, 500
NcoI CCATGG 1 cut(s) 733
NdeII GATC 3 cut(s) 131, 238, 848
NheI GCTAGC 1 cut(s) 391
NlaIII CATG 6 cut(s) 50, 98, 271, 737, 981, 1455
NlaIV GGNNCC 5 cut(s) 480, 731, 964, 990, 1137
NmeAIII GCCGAG 2 cut(s) 318, 722
NmuCI GTSAC 2 cut(s) 104, 669
NsiI ATGCAT 1 cut(s) 979
NspI RCATGY 1 cut(s) 981
PagI TCATGA 1 cut(s) 94
PciSI GCTCTTC 1 cut(s) 551
PdmI GAANNNNTTC 1 cut(s) 1431
PfeI GAWTC 2 cut(s) 332, 538
PfoI TCCNGGA 1 cut(s) 596
PkrI GCNGC 4 cut(s) 63, 176, 940, 1060
PleI GAGTC 1 cut(s) 676
PpsI GAGTC 1 cut(s) 676
PpuMI RGGWCCY 2 cut(s) 988, 1202
PshBI ATTAAT 3 cut(s) 39, 872, 1236
Psp5II RGGWCCY 2 cut(s) 988, 1202
Psp6I CCWGG 2 cut(s) 596, 639
PspGI CCWGG 2 cut(s) 596, 639
PspN4I GGNNCC 5 cut(s) 480, 731, 964, 990, 1137
PspPI GGNCC 3 cut(s) 478, 988, 1202
PspPPI RGGWCCY 2 cut(s) 988, 1202
PstI CTGCAG 1 cut(s) 385
PstNI CAGNNNCTG 1 cut(s) 1061
PsuI RGATCY 1 cut(s) 238
PvuII CAGCTG 2 cut(s) 941, 1061
RsaI GTAC 3 cut(s) 909, 1137, 1401
RsaNI GTAC 3 cut(s) 908, 1136, 1400
RseI CAYNNNNRTG 2 cut(s) 99, 676
SalI GTCGAC 1 cut(s) 13
SapI GCTCTTC 1 cut(s) 551
SaqAI TTAA 4 cut(s) 39, 872, 900, 1236
SatI GCNGC 4 cut(s) 62, 175, 939, 1059
Sau3AI GATC 3 cut(s) 131, 238, 848
Sau96I GGNCC 3 cut(s) 478, 988, 1202
SchI GAGTC 1 cut(s) 677
ScrFI CCNGG 2 cut(s) 598, 641
SfaNI GCATC 3 cut(s) 572, 733, 1448
SfcI CTRYAG 2 cut(s) 381, 722
SinI GGWCC 3 cut(s) 478, 988, 1202
SmiMI CAYNNNNRTG 2 cut(s) 99, 676
SsiI CCGC 3 cut(s) 111, 174, 767
SspMI CTAG 3 cut(s) 392, 675, 1424
StyD4I CCNGG 2 cut(s) 596, 639
StyI CCWWGG 4 cut(s) 556, 733, 1205, 1392
TaiI ACGT 2 cut(s) 575, 1173
TaqI TCGA 3 cut(s) 14, 847, 1184
TatI WGTACW 1 cut(s) 907
TauI GCSGC 1 cut(s) 177
TfiI GAWTC 2 cut(s) 332, 538
Tru1I TTAA 4 cut(s) 39, 872, 900, 1236
Tru9I TTAA 4 cut(s) 39, 872, 900, 1236
TscAI CASTG 2 cut(s) 303, 385
TseFI GTSAC 2 cut(s) 104, 669
TseI GCWGC 3 cut(s) 61, 938, 1058
Tsp45I GTSAC 2 cut(s) 104, 669
TspDTI ATGAA 7 cut(s) 58, 111, 450, 538, 565, 1060, 1337
TspGWI ACGGA 2 cut(s) 506, 918
TspRI CASTG 2 cut(s) 303, 385
VpaK11BI GGWCC 3 cut(s) 478, 988, 1202
VspI ATTAAT 3 cut(s) 39, 872, 1236
XapI RAATTY 5 cut(s) 456, 707, 771, 1092, 1431
XceI RCATGY 1 cut(s) 981
XmiI GTMKAC 1 cut(s) 14
XmnI GAANNNNTTC 1 cut(s) 1431
XspI CTAG 3 cut(s) 392, 675, 1424
Zsp2I ATGCAT 1 cut(s) 979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.