Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G18840 |
| fragaria_vesca | FvH4_4g16900 FvH4_4g16900 FvH4_4g16900 |
| malus_domestica | MD13G1175900.v1.1 |
| prunus_persica | Prupe.1G144800_v2.0.a1 Prupe.1G144800_v2.0.a1 Prupe.1G144900_v2.0.a1 |
| pyrus_communis | pycom13g15160 |
| rosa_chinensis | RchiOBHm_Chr4g0420471 RchiOBHm_Chr4g0420481 |
| rosa_laevigata | RLG00000007758 RLG00000007760 |
| rosa_multiflora | Rmu_sc0002248.1_g000042 Rmu_sc0020995.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00363090 Rroxscaffold_5G00363100 |
| rosa_rugosa | Rorug04G0164000 Rorug04G0164000 Rorug04G0164100 Rorug04G0164200 Rorug04G0164200 |
| rosa_samantha | Rh4AG225700 Rh4AG225800 Rh4BG228300 Rh4BG228400 Rh4CG240000 Rh4CG240100 Rh4DG224100 Rh4DG224200 |
| rosa_wichuraiana | Rw4G019480 Rw4G019490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 115 |
| AgsI | TTSAA | 1 cut(s) | 115 |
| AjnI | CCWGG | 1 cut(s) | 155 |
| AluBI | AGCT | 1 cut(s) | 25 |
| AluI | AGCT | 1 cut(s) | 25 |
| AlwI | GGATC | 1 cut(s) | 115 |
| AoxI | GGCC | 1 cut(s) | 108 |
| ApeKI | GCWGC | 1 cut(s) | 25 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 14, 46 |
| AspS9I | GGNCC | 1 cut(s) | 108 |
| AsuHPI | GGTGA | 1 cut(s) | 112 |
| BbvI | GCAGC | 1 cut(s) | 12 |
| BccI | CCATC | 1 cut(s) | 91 |
| BciT130I | CCWGG | 1 cut(s) | 157 |
| BclI | TGATCA | 1 cut(s) | 76 |
| BfmI | CTRYAG | 1 cut(s) | 26 |
| BisI | GCNGC | 1 cut(s) | 26 |
| BlsI | GCNGC | 1 cut(s) | 27 |
| Bme1390I | CCNGG | 1 cut(s) | 157 |
| BmgT120I | GGNCC | 1 cut(s) | 108 |
| BmrFI | CCNGG | 1 cut(s) | 157 |
| BseBI | CCWGG | 1 cut(s) | 157 |
| BseXI | GCAGC | 1 cut(s) | 12 |
| BshFI | GGCC | 1 cut(s) | 110 |
| BslFI | GGGAC | 1 cut(s) | 53 |
| BsmFI | GGGAC | 1 cut(s) | 53 |
| BsnI | GGCC | 1 cut(s) | 110 |
| Bsp143I | GATC | 2 cut(s) | 76, 120 |
| BspANI | GGCC | 1 cut(s) | 110 |
| BspMAI | CTGCAG | 1 cut(s) | 30 |
| BspPI | GGATC | 1 cut(s) | 115 |
| BssMI | GATC | 2 cut(s) | 76, 120 |
| Bst2UI | CCWGG | 1 cut(s) | 157 |
| BstKTI | GATC | 2 cut(s) | 79, 123 |
| BstMBI | GATC | 2 cut(s) | 76, 120 |
| BstNI | CCWGG | 1 cut(s) | 157 |
| BstSCI | CCNGG | 1 cut(s) | 155 |
| BstSFI | CTRYAG | 1 cut(s) | 26 |
| BstV1I | GCAGC | 1 cut(s) | 12 |
| BsuRI | GGCC | 1 cut(s) | 110 |
| Cfr13I | GGNCC | 1 cut(s) | 108 |
| CviAII | CATG | 1 cut(s) | 34 |
| CviJI | RGCY | 3 cut(s) | 25, 110, 139 |
| CviKI_1 | RGCY | 3 cut(s) | 25, 110, 139 |
| DpnI | GATC | 2 cut(s) | 78, 122 |
| DpnII | GATC | 2 cut(s) | 76, 120 |
| Eco32I | GATATC | 1 cut(s) | 39 |
| EcoRII | CCWGG | 1 cut(s) | 155 |
| EcoRV | GATATC | 1 cut(s) | 39 |
| FaeI | CATG | 1 cut(s) | 37 |
| FaiI | YATR | 4 cut(s) | 35, 81, 179, 187 |
| FaqI | GGGAC | 1 cut(s) | 53 |
| FatI | CATG | 1 cut(s) | 33 |
| FbaI | TGATCA | 1 cut(s) | 76 |
| Fnu4HI | GCNGC | 1 cut(s) | 26 |
| Fsp4HI | GCNGC | 1 cut(s) | 26 |
| GluI | GCNGC | 1 cut(s) | 26 |
| HaeIII | GGCC | 1 cut(s) | 110 |
| Hin1II | CATG | 1 cut(s) | 37 |
| HinfI | GANTC | 2 cut(s) | 12, 103 |
| HphI | GGTGA | 1 cut(s) | 112 |
| Hpy166II | GTNNAC | 1 cut(s) | 165 |
| Hpy188III | TCNNGA | 1 cut(s) | 16 |
| Hpy8I | GTNNAC | 1 cut(s) | 165 |
| HpyAV | CCTTC | 1 cut(s) | 121 |
| HpyCH4V | TGCA | 2 cut(s) | 28, 174 |
| Hsp92II | CATG | 1 cut(s) | 37 |
| Ksp22I | TGATCA | 1 cut(s) | 76 |
| Kzo9I | GATC | 2 cut(s) | 76, 120 |
| LpnPI | CCDG | 3 cut(s) | 137, 142, 169 |
| Lsp1109I | GCAGC | 1 cut(s) | 12 |
| MalI | GATC | 2 cut(s) | 78, 122 |
| MboI | GATC | 2 cut(s) | 76, 120 |
| MboII | GAAGA | 3 cut(s) | 64, 103, 106 |
| MluCI | AATT | 1 cut(s) | 63 |
| MlyI | GAGTC | 1 cut(s) | 21 |
| MmeI | TCCRAC | 1 cut(s) | 68 |
| MspR9I | CCNGG | 1 cut(s) | 157 |
| MvaI | CCWGG | 1 cut(s) | 157 |
| NdeII | GATC | 2 cut(s) | 76, 120 |
| NlaIII | CATG | 1 cut(s) | 37 |
| PfeI | GAWTC | 1 cut(s) | 103 |
| PkrI | GCNGC | 1 cut(s) | 27 |
| PleI | GAGTC | 1 cut(s) | 20 |
| PpsI | GAGTC | 1 cut(s) | 20 |
| Psp6I | CCWGG | 1 cut(s) | 155 |
| PspGI | CCWGG | 1 cut(s) | 155 |
| PspPI | GGNCC | 1 cut(s) | 108 |
| PstI | CTGCAG | 1 cut(s) | 30 |
| SatI | GCNGC | 1 cut(s) | 26 |
| Sau3AI | GATC | 2 cut(s) | 76, 120 |
| Sau96I | GGNCC | 1 cut(s) | 108 |
| SchI | GAGTC | 1 cut(s) | 21 |
| ScrFI | CCNGG | 1 cut(s) | 157 |
| SetI | ASST | 2 cut(s) | 27, 158 |
| SfcI | CTRYAG | 1 cut(s) | 26 |
| SgeI | CNNG | 8 cut(s) | 21, 28, 46, 61, 119, 136, 168, 169 |
| Sse9I | AATT | 1 cut(s) | 63 |
| StyD4I | CCNGG | 1 cut(s) | 155 |
| TasI | AATT | 1 cut(s) | 63 |
| TfiI | GAWTC | 1 cut(s) | 103 |
| TseI | GCWGC | 1 cut(s) | 25 |
| TspDTI | ATGAA | 2 cut(s) | 17, 72 |