FvH4_4g16990

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
20899181 .. 20901288
2108 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g16990.t1

Sequence Viewer

Length: 216 bp
ATGAAGTTTCTTGATTGGTATTTGAAGATCGCATTTGGGTCGGCTCTGATTGGAGCTTCCATGGAGTTCTTCATGATTAAAACCGGCTTCTATGATAAAGTAACAGTTCTGGAGTCTGAAAAACGGGCTTGGGAGAGTTCACCAGAGGCTCAGGCGGTCAGAGAAGCTCTCAATCCTTGGAGAAATCATGATGTAGAAGCAAAGAAAGAATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

72

Amino Acids

8.23

Weight (kDa)

5.76

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 155
AgsI TTSAA 1 cut(s) 25
AluBI AGCT 2 cut(s) 56, 167
AluI AGCT 2 cut(s) 56, 167
AsuHPI GGTGA 1 cut(s) 132
BcgI CGANNNNNNTGC 2 cut(s) 21, 55
BplI GAGNNNNNCTC 2 cut(s) 153, 185
BpmI CTGGAG 1 cut(s) 131
Bpu10I CCTNAGC 1 cut(s) 150
BsaJI CCNNGG 2 cut(s) 60, 176
Bse118I RCCGGY 1 cut(s) 83
BseDI CCNNGG 2 cut(s) 60, 176
BseMII CTCAG 1 cut(s) 164
BsiSI CCGG 1 cut(s) 84
Bsp143I GATC 1 cut(s) 27
Bsp19I CCATGG 1 cut(s) 60
BspACI CCGC 1 cut(s) 155
BspCNI CTCAG 1 cut(s) 163
BspHI TCATGA 2 cut(s) 72, 187
BsrFI RCCGGY 1 cut(s) 83
BssAI RCCGGY 1 cut(s) 83
BssECI CCNNGG 2 cut(s) 60, 176
BssMI GATC 1 cut(s) 27
BssT1I CCWWGG 2 cut(s) 60, 176
Bst4CI ACNGT 1 cut(s) 106
BstDEI CTNAG 1 cut(s) 150
BstDSI CCRYGG 1 cut(s) 60
BstKTI GATC 1 cut(s) 30
BstMBI GATC 1 cut(s) 27
BtgI CCRYGG 1 cut(s) 60
CciI TCATGA 2 cut(s) 72, 187
Cfr10I RCCGGY 1 cut(s) 83
CviAII CATG 3 cut(s) 61, 73, 188
CviJI RGCY 6 cut(s) 44, 56, 87, 128, 149, 167
CviKI_1 RGCY 6 cut(s) 44, 56, 87, 128, 149, 167
DdeI CTNAG 1 cut(s) 150
DpnI GATC 1 cut(s) 29
DpnII GATC 1 cut(s) 27
Eco130I CCWWGG 2 cut(s) 60, 176
EcoT14I CCWWGG 2 cut(s) 60, 176
ErhI CCWWGG 2 cut(s) 60, 176
FaeI CATG 3 cut(s) 64, 76, 191
FaiI YATR 4 cut(s) 62, 74, 93, 189
FatI CATG 3 cut(s) 60, 72, 187
GsuI CTGGAG 1 cut(s) 131
HapII CCGG 1 cut(s) 84
Hin1II CATG 3 cut(s) 64, 76, 191
HinfI GANTC 2 cut(s) 113, 209
HpaII CCGG 1 cut(s) 84
HphI GGTGA 1 cut(s) 132
Hpy166II GTNNAC 1 cut(s) 140
Hpy188I TCNGA 3 cut(s) 48, 118, 161
Hpy188III TCNNGA 4 cut(s) 11, 73, 110, 188
Hpy8I GTNNAC 1 cut(s) 140
HpyCH4III ACNGT 1 cut(s) 106
HpyF3I CTNAG 1 cut(s) 150
Hsp92II CATG 3 cut(s) 64, 76, 191
Kzo9I GATC 1 cut(s) 27
LmnI GCTCC 1 cut(s) 53
LpnPI CCDG 4 cut(s) 95, 97, 137, 156
MaeIII GTNAC 1 cut(s) 100
MalI GATC 1 cut(s) 29
MboI GATC 1 cut(s) 27
MboII GAAGA 2 cut(s) 37, 61
MlyI GAGTC 1 cut(s) 122
MnlI CCTC 1 cut(s) 139
MseI TTAA 1 cut(s) 78
MspI CCGG 1 cut(s) 84
NcoI CCATGG 1 cut(s) 60
NdeII GATC 1 cut(s) 27
NlaIII CATG 3 cut(s) 64, 76, 191
PagI TCATGA 2 cut(s) 72, 187
PfeI GAWTC 1 cut(s) 209
PleI GAGTC 1 cut(s) 121
PpsI GAGTC 1 cut(s) 121
SaqAI TTAA 1 cut(s) 78
Sau3AI GATC 1 cut(s) 27
SchI GAGTC 1 cut(s) 122
SetI ASST 2 cut(s) 58, 169
SsiI CCGC 1 cut(s) 155
StyI CCWWGG 2 cut(s) 60, 176
TaaI ACNGT 1 cut(s) 106
TfiI GAWTC 1 cut(s) 209
Tru1I TTAA 1 cut(s) 78
Tru9I TTAA 1 cut(s) 78
TspDTI ATGAA 2 cut(s) 17, 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.