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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62450 |
| fragaria_vesca | FvH4_4g16990 |
| malus_domestica | MD16G1176900.v1.1 |
| prunus_persica | Prupe.1G143700_v2.0.a1 Prupe.1G143700_v2.0.a1 |
| pyrus_communis | pycom16g14840 |
| rosa_chinensis | RchiOBHm_Chr1g0363231 RchiOBHm_Chr4g0420661 |
| rosa_multiflora | Rmu_sc0011080.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00293290 Rroxscaffold_5G00363200 Rroxscaffold_6G00393620 |
| rosa_rugosa | Rorug01G0335000 Rorug03G0345100 Rorug05G0255300 Rorug05G0255400 Rorug05G0255500 |
| rosa_samantha | Rh4AG226800 Rh4BG229400 Rh4CG241800 Rh4DG225100 |
| rosa_wichuraiana | Rw1G027870 Rw4G019630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 283 |
| AccI | GTMKAC | 1 cut(s) | 695 |
| AciI | CCGC | 2 cut(s) | 572, 722 |
| AcuI | CTGAAG | 3 cut(s) | 261, 570, 675 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 132 |
| AflII | CTTAAG | 1 cut(s) | 475 |
| AflIII | ACRYGT | 1 cut(s) | 421 |
| AgsI | TTSAA | 2 cut(s) | 672, 711 |
| AjnI | CCWGG | 1 cut(s) | 622 |
| AluBI | AGCT | 3 cut(s) | 15, 336, 544 |
| AluI | AGCT | 3 cut(s) | 15, 336, 544 |
| Alw26I | GTCTC | 3 cut(s) | 69, 230, 350 |
| AoxI | GGCC | 2 cut(s) | 557, 620 |
| AseI | ATTAAT | 1 cut(s) | 300 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 643 |
| AspS9I | GGNCC | 1 cut(s) | 450 |
| AsuHPI | GGTGA | 1 cut(s) | 605 |
| AvaII | GGWCC | 1 cut(s) | 450 |
| BanI | GGYRCC | 1 cut(s) | 283 |
| BbsI | GAAGAC | 2 cut(s) | 95, 518 |
| BciT130I | CCWGG | 1 cut(s) | 624 |
| BclI | TGATCA | 1 cut(s) | 391 |
| BcoDI | GTCTC | 3 cut(s) | 69, 230, 350 |
| BfaI | CTAG | 3 cut(s) | 216, 413, 587 |
| BfrI | CTTAAG | 1 cut(s) | 475 |
| BglII | AGATCT | 1 cut(s) | 148 |
| Bme1390I | CCNGG | 1 cut(s) | 624 |
| Bme18I | GGWCC | 1 cut(s) | 450 |
| BmgT120I | GGNCC | 1 cut(s) | 450 |
| BmiI | GGNNCC | 2 cut(s) | 268, 285 |
| BmrFI | CCNGG | 1 cut(s) | 624 |
| BmsI | GCATC | 2 cut(s) | 124, 573 |
| BpiI | GAAGAC | 2 cut(s) | 95, 518 |
| BpmI | CTGGAG | 1 cut(s) | 374 |
| BsaI | GGTCTC | 1 cut(s) | 69 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 132 |
| Bse3DI | GCAATG | 3 cut(s) | 169, 503, 508 |
| BseBI | CCWGG | 1 cut(s) | 624 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 132 |
| BseMI | GCAATG | 3 cut(s) | 169, 503, 508 |
| BseMII | CTCAG | 3 cut(s) | 80, 122, 213 |
| BseRI | GAGGAG | 2 cut(s) | 243, 388 |
| BshFI | GGCC | 2 cut(s) | 559, 622 |
| BshNI | GGYRCC | 1 cut(s) | 283 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 132 |
| BsmAI | GTCTC | 3 cut(s) | 69, 230, 350 |
| BsmI | GAATGC | 1 cut(s) | 476 |
| BsnI | GGCC | 2 cut(s) | 559, 622 |
| Bso31I | GGTCTC | 1 cut(s) | 69 |
| Bsp143I | GATC | 3 cut(s) | 34, 148, 391 |
| BspACI | CCGC | 2 cut(s) | 572, 722 |
| BspANI | GGCC | 2 cut(s) | 559, 622 |
| BspCNI | CTCAG | 3 cut(s) | 79, 123, 212 |
| BspHI | TCATGA | 1 cut(s) | 388 |
| BspLI | GGNNCC | 2 cut(s) | 268, 285 |
| BspT107I | GGYRCC | 1 cut(s) | 283 |
| BspTI | CTTAAG | 1 cut(s) | 475 |
| BspTNI | GGTCTC | 1 cut(s) | 69 |
| BsrDI | GCAATG | 3 cut(s) | 169, 503, 508 |
| BssMI | GATC | 3 cut(s) | 34, 148, 391 |
| BssNAI | GTATAC | 1 cut(s) | 696 |
| Bst1107I | GTATAC | 1 cut(s) | 696 |
| Bst2UI | CCWGG | 1 cut(s) | 624 |
| Bst4CI | ACNGT | 2 cut(s) | 275, 718 |
| BstAFI | CTTAAG | 1 cut(s) | 475 |
| BstC8I | GCNNGC | 1 cut(s) | 160 |
| BstDEI | CTNAG | 3 cut(s) | 66, 131, 199 |
| BstKTI | GATC | 3 cut(s) | 37, 151, 394 |
| BstMAI | GTCTC | 3 cut(s) | 69, 230, 350 |
| BstMBI | GATC | 3 cut(s) | 34, 148, 391 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 21 |
| BstNI | CCWGG | 1 cut(s) | 624 |
| BstNSI | RCATGY | 2 cut(s) | 425, 521 |
| BstSCI | CCNGG | 1 cut(s) | 622 |
| BstV2I | GAAGAC | 2 cut(s) | 95, 518 |
| BstX2I | RGATCY | 1 cut(s) | 148 |
| BstYI | RGATCY | 1 cut(s) | 148 |
| BstZ17I | GTATAC | 1 cut(s) | 696 |
| BsuRI | GGCC | 2 cut(s) | 559, 622 |
| BtsIMutI | CAGTG | 1 cut(s) | 74 |
| Cac8I | GCNNGC | 1 cut(s) | 160 |
| CciI | TCATGA | 1 cut(s) | 388 |
| Cfr13I | GGNCC | 1 cut(s) | 450 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 699, 734 |
| CviAII | CATG | 7 cut(s) | 211, 280, 389, 422, 486, 518, 565 |
| CviJI | RGCY | 8 cut(s) | 15, 215, 220, 336, 544, 559, 622, 728 |
| CviKI_1 | RGCY | 8 cut(s) | 15, 215, 220, 336, 544, 559, 622, 728 |
| DdeI | CTNAG | 3 cut(s) | 66, 131, 199 |
| DpnI | GATC | 3 cut(s) | 36, 150, 393 |
| DpnII | GATC | 3 cut(s) | 34, 148, 391 |
| Eco31I | GGTCTC | 1 cut(s) | 69 |
| Eco47I | GGWCC | 1 cut(s) | 450 |
| Eco57I | CTGAAG | 3 cut(s) | 261, 570, 675 |
| EcoO109I | RGGNCCY | 1 cut(s) | 450 |
| EcoRII | CCWGG | 1 cut(s) | 622 |
| FaeI | CATG | 7 cut(s) | 214, 283, 392, 425, 489, 521, 568 |
| FatI | CATG | 7 cut(s) | 210, 279, 388, 421, 485, 517, 564 |
| FbaI | TGATCA | 1 cut(s) | 391 |
| FblI | GTMKAC | 1 cut(s) | 695 |
| FspBI | CTAG | 3 cut(s) | 216, 413, 587 |
| GsuI | CTGGAG | 1 cut(s) | 374 |
| HaeIII | GGCC | 2 cut(s) | 559, 622 |
| Hin1II | CATG | 7 cut(s) | 214, 283, 392, 425, 489, 521, 568 |
| HindIII | AAGCTT | 2 cut(s) | 13, 542 |
| HinfI | GANTC | 4 cut(s) | 122, 246, 482, 662 |
| HphI | GGTGA | 1 cut(s) | 605 |
| Hpy166II | GTNNAC | 1 cut(s) | 696 |
| Hpy188I | TCNGA | 6 cut(s) | 202, 325, 396, 499, 582, 655 |
| Hpy188III | TCNNGA | 4 cut(s) | 119, 126, 389, 548 |
| Hpy8I | GTNNAC | 1 cut(s) | 696 |
| HpyAV | CCTTC | 4 cut(s) | 80, 236, 437, 441 |
| HpyCH4III | ACNGT | 2 cut(s) | 275, 718 |
| HpyCH4IV | ACGT | 1 cut(s) | 327 |
| HpyCH4V | TGCA | 4 cut(s) | 115, 489, 508, 513 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 21 |
| HpyF3I | CTNAG | 3 cut(s) | 66, 131, 199 |
| HpySE526I | ACGT | 1 cut(s) | 327 |
| Hsp92II | CATG | 7 cut(s) | 214, 283, 392, 425, 489, 521, 568 |
| Ksp22I | TGATCA | 1 cut(s) | 391 |
| Kzo9I | GATC | 3 cut(s) | 34, 148, 391 |
| LpnPI | CCDG | 8 cut(s) | 104, 139, 300, 338, 507, 561, 609, 636 |
| LweI | GCATC | 2 cut(s) | 124, 573 |
| MaeI | CTAG | 3 cut(s) | 216, 413, 587 |
| MaeII | ACGT | 1 cut(s) | 327 |
| MaeIII | GTNAC | 3 cut(s) | 168, 247, 275 |
| MalI | GATC | 3 cut(s) | 36, 150, 393 |
| MboI | GATC | 3 cut(s) | 34, 148, 391 |
| MboII | GAAGA | 4 cut(s) | 95, 518, 563, 660 |
| MflI | RGATCY | 1 cut(s) | 148 |
| MluCI | AATT | 1 cut(s) | 308 |
| MlyI | GAGTC | 1 cut(s) | 255 |
| MmeI | TCCRAC | 3 cut(s) | 36, 244, 397 |
| MnlI | CCTC | 7 cut(s) | 126, 221, 366, 374, 451, 618, 718 |
| MroXI | GAANNNNTTC | 1 cut(s) | 643 |
| MseI | TTAA | 5 cut(s) | 153, 300, 362, 408, 476 |
| MspCI | CTTAAG | 1 cut(s) | 475 |
| MspR9I | CCNGG | 1 cut(s) | 624 |
| Mva1269I | GAATGC | 1 cut(s) | 476 |
| MvaI | CCWGG | 1 cut(s) | 624 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 21 |
| NdeII | GATC | 3 cut(s) | 34, 148, 391 |
| NlaIII | CATG | 7 cut(s) | 214, 283, 392, 425, 489, 521, 568 |
| NlaIV | GGNNCC | 2 cut(s) | 268, 285 |
| NmuCI | GTSAC | 1 cut(s) | 247 |
| NspI | RCATGY | 2 cut(s) | 425, 521 |
| PagI | TCATGA | 1 cut(s) | 388 |
| PciI | ACATGT | 1 cut(s) | 421 |
| PctI | GAATGC | 1 cut(s) | 476 |
| PdmI | GAANNNNTTC | 1 cut(s) | 643 |
| PfeI | GAWTC | 3 cut(s) | 122, 482, 662 |
| PleI | GAGTC | 1 cut(s) | 254 |
| PpsI | GAGTC | 1 cut(s) | 254 |
| PpuMI | RGGWCCY | 1 cut(s) | 450 |
| PscI | ACATGT | 1 cut(s) | 421 |
| PshBI | ATTAAT | 1 cut(s) | 300 |
| Psp5II | RGGWCCY | 1 cut(s) | 450 |
| Psp6I | CCWGG | 1 cut(s) | 622 |
| PspGI | CCWGG | 1 cut(s) | 622 |
| PspN4I | GGNNCC | 2 cut(s) | 268, 285 |
| PspPI | GGNCC | 1 cut(s) | 450 |
| PspPPI | RGGWCCY | 1 cut(s) | 450 |
| PsuI | RGATCY | 1 cut(s) | 148 |
| SaqAI | TTAA | 5 cut(s) | 153, 300, 362, 408, 476 |
| Sau3AI | GATC | 3 cut(s) | 34, 148, 391 |
| Sau96I | GGNCC | 1 cut(s) | 450 |
| SchI | GAGTC | 1 cut(s) | 255 |
| ScrFI | CCNGG | 1 cut(s) | 624 |
| SfaNI | GCATC | 2 cut(s) | 124, 573 |
| SinI | GGWCC | 1 cut(s) | 450 |
| SmlI | CTYRAG | 1 cut(s) | 475 |
| SmoI | CTYRAG | 1 cut(s) | 475 |
| Sse9I | AATT | 1 cut(s) | 308 |
| SsiI | CCGC | 2 cut(s) | 572, 722 |
| SspI | AATATT | 1 cut(s) | 644 |
| SspMI | CTAG | 3 cut(s) | 216, 413, 587 |
| StyD4I | CCNGG | 1 cut(s) | 622 |
| TaaI | ACNGT | 2 cut(s) | 275, 718 |
| TaiI | ACGT | 1 cut(s) | 330 |
| TaqI | TCGA | 3 cut(s) | 33, 84, 730 |
| TasI | AATT | 1 cut(s) | 308 |
| TfiI | GAWTC | 3 cut(s) | 122, 482, 662 |
| Tru1I | TTAA | 5 cut(s) | 153, 300, 362, 408, 476 |
| Tru9I | TTAA | 5 cut(s) | 153, 300, 362, 408, 476 |
| TscAI | CASTG | 1 cut(s) | 74 |
| TseFI | GTSAC | 1 cut(s) | 247 |
| Tsp45I | GTSAC | 1 cut(s) | 247 |
| TspDTI | ATGAA | 7 cut(s) | 131, 200, 377, 636, 654, 696, 717 |
| TspRI | CASTG | 1 cut(s) | 74 |
| Vha464I | CTTAAG | 1 cut(s) | 475 |
| VpaK11BI | GGWCC | 1 cut(s) | 450 |
| VspI | ATTAAT | 1 cut(s) | 300 |
| XceI | RCATGY | 2 cut(s) | 425, 521 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 13, 571 |
| XmiI | GTMKAC | 1 cut(s) | 695 |
| XmnI | GAANNNNTTC | 1 cut(s) | 643 |
| XspI | CTAG | 3 cut(s) | 216, 413, 587 |