No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62450 |
| fragaria_vesca | FvH4_4g16990 |
| malus_domestica | MD16G1176900.v1.1 |
| prunus_persica | Prupe.1G143700_v2.0.a1 Prupe.1G143700_v2.0.a1 |
| pyrus_communis | pycom16g14840 |
| rosa_chinensis | RchiOBHm_Chr1g0363231 RchiOBHm_Chr4g0420661 |
| rosa_multiflora | Rmu_sc0011080.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00293290 Rroxscaffold_5G00363200 Rroxscaffold_6G00393620 |
| rosa_rugosa | Rorug01G0335000 Rorug03G0345100 Rorug05G0255300 Rorug05G0255400 Rorug05G0255500 |
| rosa_samantha | Rh4AG226800 Rh4BG229400 Rh4CG241800 Rh4DG225100 |
| rosa_wichuraiana | Rw1G027870 Rw4G019630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 159 |
| AclWI | GGATC | 1 cut(s) | 56 |
| AcsI | RAATTY | 1 cut(s) | 40 |
| AgsI | TTSAA | 1 cut(s) | 35 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 138, 170 |
| AluBI | AGCT | 2 cut(s) | 70, 165 |
| AluI | AGCT | 2 cut(s) | 70, 165 |
| AlwI | GGATC | 1 cut(s) | 56 |
| ApoI | RAATTY | 1 cut(s) | 40 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 190 |
| AspS9I | GGNCC | 1 cut(s) | 6 |
| AvaII | GGWCC | 1 cut(s) | 6 |
| BccI | CCATC | 2 cut(s) | 68, 95 |
| BclI | TGATCA | 1 cut(s) | 111 |
| Bme18I | GGWCC | 1 cut(s) | 6 |
| BmgT120I | GGNCC | 1 cut(s) | 6 |
| BpuEI | CTTGAG | 1 cut(s) | 32 |
| BsaBI | GATNNNNATC | 1 cut(s) | 78 |
| Bse8I | GATNNNNATC | 1 cut(s) | 78 |
| BseJI | GATNNNNATC | 1 cut(s) | 78 |
| Bsp143I | GATC | 2 cut(s) | 61, 111 |
| BspACI | CCGC | 1 cut(s) | 159 |
| BspHI | TCATGA | 1 cut(s) | 139 |
| BspPI | GGATC | 1 cut(s) | 56 |
| BssMI | GATC | 2 cut(s) | 61, 111 |
| BstKTI | GATC | 2 cut(s) | 64, 114 |
| BstMBI | GATC | 2 cut(s) | 61, 111 |
| BstX2I | RGATCY | 1 cut(s) | 61 |
| BstYI | RGATCY | 1 cut(s) | 61 |
| CciI | TCATGA | 1 cut(s) | 139 |
| Cfr13I | GGNCC | 1 cut(s) | 6 |
| CviAII | CATG | 2 cut(s) | 140, 150 |
| CviJI | RGCY | 2 cut(s) | 70, 165 |
| CviKI_1 | RGCY | 2 cut(s) | 70, 165 |
| DpnI | GATC | 2 cut(s) | 63, 113 |
| DpnII | GATC | 2 cut(s) | 61, 111 |
| EciI | GGCGGA | 1 cut(s) | 174 |
| Eco47I | GGWCC | 1 cut(s) | 6 |
| FaeI | CATG | 2 cut(s) | 143, 153 |
| FaiI | YATR | 3 cut(s) | 141, 151, 183 |
| FatI | CATG | 2 cut(s) | 139, 149 |
| FbaI | TGATCA | 1 cut(s) | 111 |
| Hin1II | CATG | 2 cut(s) | 143, 153 |
| HindIII | AAGCTT | 1 cut(s) | 68 |
| HinfI | GANTC | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 1 cut(s) | 169 |
| Hpy188III | TCNNGA | 2 cut(s) | 32, 140 |
| Hsp92II | CATG | 2 cut(s) | 143, 153 |
| Ksp22I | TGATCA | 1 cut(s) | 111 |
| Kzo9I | GATC | 2 cut(s) | 61, 111 |
| LpnPI | CCDG | 1 cut(s) | 100 |
| MaeIII | GTNAC | 1 cut(s) | 215 |
| MalI | GATC | 2 cut(s) | 63, 113 |
| MboI | GATC | 2 cut(s) | 61, 111 |
| MboII | GAAGA | 3 cut(s) | 110, 155, 191 |
| MflI | RGATCY | 1 cut(s) | 61 |
| MluCI | AATT | 1 cut(s) | 40 |
| MnlI | CCTC | 1 cut(s) | 214 |
| MroXI | GAANNNNTTC | 1 cut(s) | 190 |
| NdeII | GATC | 2 cut(s) | 61, 111 |
| NlaIII | CATG | 2 cut(s) | 143, 153 |
| NmuCI | GTSAC | 1 cut(s) | 215 |
| PagI | TCATGA | 1 cut(s) | 139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 190 |
| PfeI | GAWTC | 1 cut(s) | 136 |
| PspPI | GGNCC | 1 cut(s) | 6 |
| PsuI | RGATCY | 1 cut(s) | 61 |
| Sau3AI | GATC | 2 cut(s) | 61, 111 |
| Sau96I | GGNCC | 1 cut(s) | 6 |
| SetI | ASST | 4 cut(s) | 72, 119, 167, 178 |
| SgeI | CNNG | 8 cut(s) | 22, 44, 61, 83, 127, 132, 152, 162 |
| SinI | GGWCC | 1 cut(s) | 6 |
| SmlI | CTYRAG | 1 cut(s) | 47 |
| SmoI | CTYRAG | 1 cut(s) | 47 |
| Sse9I | AATT | 1 cut(s) | 40 |
| SsiI | CCGC | 1 cut(s) | 159 |
| TasI | AATT | 1 cut(s) | 40 |
| TfiI | GAWTC | 1 cut(s) | 136 |
| TseFI | GTSAC | 1 cut(s) | 215 |
| Tsp45I | GTSAC | 1 cut(s) | 215 |
| TspDTI | ATGAA | 3 cut(s) | 71, 128, 156 |
| VpaK11BI | GGWCC | 1 cut(s) | 6 |
| XapI | RAATTY | 1 cut(s) | 40 |
| XmnI | GAANNNNTTC | 1 cut(s) | 190 |