Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0007709

Physical Location & Seq

Genomic Coordinates Forward (+)

28145176 .. 28149701

Gene Structure 4526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g26970.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGCAGCCAAGCCCTTCTTCTTCTTCTTCCTCTCTCTCCTACCTTTGCTTATCTCTGCTTCAAACCCAGACTCCGCGCCGCTCTTAGCCTTCAAGGCCACGTCGGACGCCTCCAACCTTCTCGCCACGTGGAACTCCACCTCCGACTCCTGCAACTTCGCCGGAGTCTCCTGCACCCGCAACCGCGTCTCCCGCCTCGTCCTCGAAGGCCTCGACCTCCGCGGCTCCTTCGCCGCGTTAACCGGGCTGACTCAGCTCCGAGTTCTCAGCCTGAAGCGTAACCGTCTCTCCGGGCCCATTCCCGACCTCTCTAACCTCACCTCCCTCAAGCTCCTCTTCCTCTCCTACAACGACTTCTCCGGCGTGTTTCCCGCCTCCCTGACGTCACTCTTCCGCCTTTACCGCCTCGATCTGGCGTACAACAACTTGACCGGTGATATTCCCGACGAGGTCAACCATTTGACTCACCTCCTCACTCTCCGCCTCGAAGCCAACCGATTCTCCGGCTCGATTTCCGGCCTCAACCTCCCGAATCTCCAGGAGTTCAACGTCTCGGCGAACCGTCTCTACGGCGAGATTCCCAAGTCGTTCTCTATCTTCTCTGAGTCCGCATTTGCCGAAAACCCGGGTCTCTGCGGTGCTCCGGTTCACAGCTGTAAAAACGTAACCGACCCGACCCGACCCGGATCCGGTGGAGCTATTGCCTCTCCTGTAATGCCAGCCGGCAGCCCAACCGTAGTAGCGTCCTCTCCGACTTCATTGCCTTCAAGCTCTACCTCCGTGAATTCAGGAAAGTCCACGTCACACCACAACGGCGGCCGGAAGATTAGTCCGGCGGCTCTTATCGGCATCATAGTAGGCGATGTCTTGGTGCTTCTTTTGGTGTCTTTGTTCTTGTACTGCTACTTCTGGCGGAACTTCTCGGCCAAAATGCGGCAGGGAAAGAGCAGCTCGAAGCTTATGGAGACGGAGAAGATAGTCTACTCGTCGAGCCCCTACTCCGCCCAGCCCACATTCGAGAGGGGGCAGATGGTGTTTTTCGAGGGAGTGAGGCGTTTCGAGCTGGAGGACTTGCTGAGAGCCTCGGCGGAGATGCTGGGGAAAGGTGGCTTCGGGACGGCGTACAAGGCTGTTTTGGATGATGGTAATGTGGTGGCGGTGAAGCGGCTCAAGGATGCTCAAATCGGTGGGAAGACGCAGTTCGAGCAGCACATGGCGGTGCTGGGAAGGCTTAGCCATCTTAACGTAGTGAGCTTGAGGGCTTATTATTTCGCTAGGGAGGAGAAGCTGCTGGTGTATGACTACATGCCCAATGGAAGCTTGTTTTGGCTCCTTCATGGCAACAGAGGCCCTGGCAGAACCCCACTGGACTGGACCACCAGGCTGAAAATTGCAGCCGGAGCTGCACGAGGTTTGGCCTTCATTCACAGCTCCTGTGCTCCCCTTAAGCTCACTCACGGTAACATCAAATCAACTAACGTTCTTTTGGACAAGAACGGCAATGCTCGTGTCTCCGACTTCGGACTCTCGGCATTCTCGCCTTCCGCTTCCGCCACGTCGGCGCCGCGGTCGTGCGGGTACCGCGCTCCGGAGCTGGTGGACGGTAGGAAAGTGACGCAGAAGTCTGACGTGTATGGTTTTGGTGTTCTTTTGCTGGAGATGTTGACCGGGAAATGCCCGTCTGCGGTGGTGGATGGCGGGTCTGGCGGTGGCTATGGGGGATTGGTGGACCTGCCGAGGTGGGTTCAGTCTGTGGTGAGAGAGGAGTGGACTGCCGAGGTGTTTGACTTGGAGTTGATGAGGTACAAGGACATTGAGGAGGAGATGGTGGGGCTTTTGCAGGTTGCAATGGCTTGTACGACGGCTATGCCTGATCAGCGGCCAAAGATGAGCCAGGTGGTGAAGATGATCGACGAGATTCGCGGCGTGGCGGTGTCACCGCCTCATGAGGCGCTTGATTCCATGACGGAGTCACCCGCATTGTCGGAGGACACTTGCGGAGCAAGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 Pkinase Pkinase_Tyr

Protein Analysis

671

Amino Acids

72.35

Weight (kDa)

8.65

Isoelectric Point (pI)

39.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	22 - 59	1.4e-06	Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr	PF07714	364 - 636	4.4e-36	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	364 - 565	7.3e-36	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68400
fragaria_vesca	FvH4_4g26930 FvH4_4g26970
malus_domestica	MD13G1036800.v1.1 MD13G1038100.v1.1 MD13G1038400.v1.1 MD13G1260200.v1.1
prunus_persica	Prupe.1G314900_v2.0.a1
pyrus_communis	pycom13g03310 pycom13g03320 pycom16g03410
rosa_chinensis	RchiOBHm_Chr4g0434721
rosa_laevigata	RLG00000006655
rosa_multiflora	Rmu_sc0004538.1_g000001 Rmu_sc0008439.1_g000001 Rmu_sc0017904.1_g000007
rosa_roxburghii	Rroxscaffold_5G00375930
rosa_rugosa	Rorug04G0277800
rosa_samantha	Rh4AG334200 Rh4BG342600 Rh4CG357000 Rh4DG336300
rosa_wichuraiana	Rw4G029010 Rw4G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1621
AatII	GACGTC	1 cut(s)	386
Acc36I	ACCTGC	2 cut(s)	1740, 1831
Acc65I	GGTACC	1 cut(s)	1578
AccB1I	GGYRCC	2 cut(s)	1561, 1578
AccBSI	CCGCTC	1 cut(s)	82
AccI	GTMKAC	1 cut(s)	981
AccII	CGCG	7 cut(s)	77, 186, 222, 236, 1567, 1584, 1923
AccIII	TCCGGA	1 cut(s)	1588
AclI	AACGTT	1 cut(s)	1479
AclWI	GGATC	2 cut(s)	681, 694
AcoI	YGGCCR	3 cut(s)	817, 924, 1880
AcsI	RAATTY	1 cut(s)	784
AcuI	CTGAAG	1 cut(s)	293
AcvI	CACGTG	1 cut(s)	129
AcyI	GRCGYC	3 cut(s)	108, 383, 1562
AfaI	GTAC	6 cut(s)	419, 899, 1124, 1580, 1805, 1858
AfiI	CCNNNNNNNGG	5 cut(s)	412, 689, 933, 1588, 1684
AflII	CTTAAG	1 cut(s)	1445
AflIII	ACRYGT	1 cut(s)	1629
AgeI	ACCGGT	1 cut(s)	431
AgsI	TTSAA	4 cut(s)	63, 94, 547, 768
AjiI	CACGTC	4 cut(s)	102, 801, 1557, 1630
AjnI	CCWGG	4 cut(s)	537, 1351, 1379, 1893
AjuI	GAANNNNNNNTTGG	3 cut(s)	34, 1309, 1341
AloI	GAACNNNNNNTCC	2 cut(s)	125, 157
Alw21I	GWGCWC	2 cut(s)	643, 1441
Alw26I	GTCTC	8 cut(s)	172, 193, 290, 556, 569, 635, 959, 1516
AlwI	GGATC	2 cut(s)	681, 694
AlwNI	CAGNNNCTG	1 cut(s)	1434
Ama87I	CYCGRG	1 cut(s)	625
Aor13HI	TCCGGA	1 cut(s)	1588
AoxI	GGCC	9 cut(s)	96, 208, 293, 517, 817, 924, 1348, 1416, 1880
ApaI	GGGCCC	1 cut(s)	297
ApeKI	GCWGC	7 cut(s)	5, 726, 948, 1207, 1288, 1394, 1403
ApoI	RAATTY	1 cut(s)	784
AsiGI	ACCGGT	1 cut(s)	431
Asp718I	GGTACC	1 cut(s)	1578
AspLEI	GCGC	4 cut(s)	79, 1564, 1586, 1954
AspS9I	GGNCC	5 cut(s)	293, 294, 1349, 1374, 1729
AsuC2I	CCSGG	6 cut(s)	244, 292, 626, 627, 684, 1669
AsuHPI	GGTGA	8 cut(s)	310, 446, 458, 1171, 1768, 1912, 1929, 1965
AvaI	CYCGRG	1 cut(s)	625
AvaII	GGWCC	2 cut(s)	1374, 1729
BaeGI	GKGCMC	1 cut(s)	297
BamHI	GGATCC	1 cut(s)	686
BanI	GGYRCC	2 cut(s)	1561, 1578
BanII	GRGCYC	2 cut(s)	297, 995
BarI	GAAGNNNNNNTAC	4 cut(s)	890, 922, 965, 997
BauI	CACGAG	2 cut(s)	1407, 1506
BbrPI	CACGTG	1 cut(s)	129
BbsI	GAAGAC	1 cut(s)	1199
Bbv12I	GWGCWC	2 cut(s)	643, 1441
BbvI	GCAGC	7 cut(s)	17, 738, 960, 1219, 1275, 1390, 1406
BccI	CCATC	5 cut(s)	1024, 1136, 1245, 1688, 1819
BceAI	ACGGC	5 cut(s)	586, 829, 1134, 1513, 1878
BcgI	CGANNNNNNTGC	4 cut(s)	742, 776, 1849, 1883
BciT130I	CCWGG	4 cut(s)	539, 1353, 1381, 1895
BclI	TGATCA	1 cut(s)	1873
BcnI	CCSGG	6 cut(s)	244, 292, 626, 627, 684, 1669
BcoDI	GTCTC	8 cut(s)	172, 193, 290, 556, 569, 635, 959, 1516
BfaI	CTAG	1 cut(s)	1275
BfoI	RGCGCY	2 cut(s)	1565, 1955
BfrI	CTTAAG	1 cut(s)	1445
BfuAI	ACCTGC	2 cut(s)	1740, 1831
BglI	GCCNNNNNGGC	2 cut(s)	95, 1559
BlpI	GCTNAGC	1 cut(s)	1232
Bme18I	GGWCC	2 cut(s)	1374, 1729
BmeT110I	CYCGRG	1 cut(s)	625
BmgBI	CACGTC	4 cut(s)	102, 801, 1557, 1630
BmgT120I	GGNCC	5 cut(s)	293, 294, 1349, 1374, 1729
BmiI	GGNNCC	6 cut(s)	226, 295, 688, 1331, 1563, 1580
BmsI	GCATC	3 cut(s)	858, 1083, 1165
BpiI	GAAGAC	1 cut(s)	1199
BpmI	CTGGAG	3 cut(s)	521, 1085, 1676
Bpu1102I	GCTNAGC	1 cut(s)	1232
BpuEI	CTTGAG	3 cut(s)	311, 1154, 1276
BpuMI	CCSGG	6 cut(s)	244, 292, 626, 627, 684, 1669
BsaAI	YACGTR	1 cut(s)	129
BsaHI	GRCGYC	3 cut(s)	108, 383, 1562
BsaI	GGTCTC	1 cut(s)	635
BsaJI	CCNNGG	7 cut(s)	220, 625, 1083, 1351, 1565, 1736, 1776
BsaWI	WCCGGW	4 cut(s)	431, 643, 689, 1588
Bsc4I	CCNNNNNNNGG	5 cut(s)	412, 689, 933, 1588, 1684
Bse118I	RCCGGY	2 cut(s)	431, 722
Bse1I	ACTGG	2 cut(s)	1371, 1376
Bse3DI	GCAATG	3 cut(s)	758, 1507, 1854
BseAI	TCCGGA	1 cut(s)	1588
BseBI	CCWGG	4 cut(s)	539, 1353, 1381, 1895
BseDI	CCNNGG	7 cut(s)	220, 625, 1083, 1351, 1565, 1736, 1776
BseGI	GGATG	3 cut(s)	1144, 1180, 1699
BseLI	CCNNNNNNNGG	5 cut(s)	412, 689, 933, 1588, 1684
BseMI	GCAATG	3 cut(s)	758, 1507, 1854
BseMII	CTCAG	4 cut(s)	266, 280, 594, 1067
BseNI	ACTGG	2 cut(s)	1371, 1376
BseRI	GAGGAG	6 cut(s)	323, 461, 1295, 1778, 1832, 1835
BseSI	GKGCMC	1 cut(s)	297
BseX3I	CGGCCG	1 cut(s)	817
BseXI	GCAGC	7 cut(s)	17, 738, 960, 1219, 1275, 1390, 1406
BseYI	CCCAGC	3 cut(s)	1005, 1096, 1222
BsgI	GTGCAG	2 cut(s)	157, 1389
Bsh1236I	CGCG	7 cut(s)	77, 186, 222, 236, 1567, 1584, 1923
Bsh1285I	CGRYCG	2 cut(s)	820, 1571
BshFI	GGCC	9 cut(s)	98, 210, 295, 519, 819, 926, 1350, 1418, 1882
BshNI	GGYRCC	2 cut(s)	1561, 1578
BshTI	ACCGGT	1 cut(s)	431
BsiEI	CGRYCG	2 cut(s)	820, 1571
BsiHKAI	GWGCWC	2 cut(s)	643, 1441
BsiHKCI	CYCGRG	1 cut(s)	625
BslFI	GGGAC	1 cut(s)	1129
BslI	CCNNNNNNNGG	5 cut(s)	412, 689, 933, 1588, 1684
BsmAI	GTCTC	8 cut(s)	172, 193, 290, 556, 569, 635, 959, 1516
BsmBI	CGTCTC	5 cut(s)	193, 290, 556, 569, 959
BsmFI	GGGAC	1 cut(s)	1129
BsmI	GAATGC	1 cut(s)	1532
BsnI	GGCC	9 cut(s)	98, 210, 295, 519, 819, 926, 1350, 1418, 1882
Bso31I	GGTCTC	1 cut(s)	635
BsoBI	CYCGRG	1 cut(s)	625
Bsp120I	GGGCCC	1 cut(s)	293
Bsp1286I	GDGCHC	4 cut(s)	297, 643, 995, 1441
Bsp13I	TCCGGA	1 cut(s)	1588
Bsp143I	GATC	4 cut(s)	409, 686, 1873, 1908
Bsp1720I	GCTNAGC	1 cut(s)	1232
BspANI	GGCC	9 cut(s)	98, 210, 295, 519, 819, 926, 1350, 1418, 1882
BspCNI	CTCAG	4 cut(s)	265, 279, 595, 1068
BspEI	TCCGGA	1 cut(s)	1588
BspFNI	CGCG	7 cut(s)	77, 186, 222, 236, 1567, 1584, 1923
BspHI	TCATGA	1 cut(s)	1945
BspLI	GGNNCC	6 cut(s)	226, 295, 688, 1331, 1563, 1580
BspMI	ACCTGC	2 cut(s)	1740, 1831
BspPI	GGATC	2 cut(s)	681, 694
BspT107I	GGYRCC	2 cut(s)	1561, 1578
BspTI	CTTAAG	1 cut(s)	1445
BspTNI	GGTCTC	1 cut(s)	635
BsrBI	CCGCTC	1 cut(s)	82
BsrDI	GCAATG	3 cut(s)	758, 1507, 1854
BsrFI	RCCGGY	2 cut(s)	431, 722
BsrI	ACTGG	2 cut(s)	1371, 1376
BssAI	RCCGGY	2 cut(s)	431, 722
BssECI	CCNNGG	7 cut(s)	220, 625, 1083, 1351, 1565, 1736, 1776
BssMI	GATC	4 cut(s)	409, 686, 1873, 1908
BssNI	GRCGYC	3 cut(s)	108, 383, 1562
BssSI	CACGAG	2 cut(s)	1407, 1506
Bst2BI	CACGAG	2 cut(s)	1407, 1506
Bst2UI	CCWGG	4 cut(s)	539, 1353, 1381, 1895
Bst4CI	ACNGT	5 cut(s)	284, 563, 736, 1460, 1604
Bst6I	CTCTTC	2 cut(s)	341, 395
BstACI	GRCGYC	3 cut(s)	108, 383, 1562
BstAFI	CTTAAG	1 cut(s)	1445
BstBAI	YACGTR	1 cut(s)	129
BstC8I	GCNNGC	2 cut(s)	720, 724
BstDEI	CTNAG	6 cut(s)	85, 252, 266, 603, 1076, 1232
BstDSI	CCRYGG	2 cut(s)	220, 1565
BstF5I	GGATG	3 cut(s)	1144, 1180, 1699
BstFNI	CGCG	7 cut(s)	77, 186, 222, 236, 1567, 1584, 1923
BstH2I	RGCGCY	2 cut(s)	1565, 1955
BstHHI	GCGC	4 cut(s)	79, 1564, 1586, 1954
BstKTI	GATC	4 cut(s)	412, 689, 1876, 1911
BstMAI	GTCTC	8 cut(s)	172, 193, 290, 556, 569, 635, 959, 1516
BstMBI	GATC	4 cut(s)	409, 686, 1873, 1908
BstMCI	CGRYCG	2 cut(s)	820, 1571
BstNI	CCWGG	4 cut(s)	539, 1353, 1381, 1895
BstNSI	RCATGY	1 cut(s)	1309
BstSLI	GKGCMC	1 cut(s)	297
BstUI	CGCG	7 cut(s)	77, 186, 222, 236, 1567, 1584, 1923
BstV1I	GCAGC	7 cut(s)	17, 738, 960, 1219, 1275, 1390, 1406
BstV2I	GAAGAC	1 cut(s)	1199
BstX2I	RGATCY	1 cut(s)	686
BstXI	CCANNNNNNTGG	1 cut(s)	1371
BstYI	RGATCY	1 cut(s)	686
BstZI	CGGCCG	1 cut(s)	817
BsuRI	GGCC	9 cut(s)	98, 210, 295, 519, 819, 926, 1350, 1418, 1882
BtgI	CCRYGG	2 cut(s)	220, 1565
BtgZI	GCGATG	1 cut(s)	876
BtrI	CACGTC	4 cut(s)	102, 801, 1557, 1630
BtsCI	GGATG	3 cut(s)	1144, 1180, 1699
BtsIMutI	CAGTG	1 cut(s)	1364
BveI	ACCTGC	2 cut(s)	1740, 1831
Cac8I	GCNNGC	2 cut(s)	720, 724
CaiI	CAGNNNCTG	1 cut(s)	1434
CciI	TCATGA	1 cut(s)	1945
CfoI	GCGC	4 cut(s)	79, 1564, 1586, 1954
Cfr10I	RCCGGY	2 cut(s)	431, 722
Cfr13I	GGNCC	5 cut(s)	293, 294, 1349, 1374, 1729
Cfr42I	CCGCGG	2 cut(s)	223, 1568
Cfr9I	CCCGGG	1 cut(s)	625
CseI	GACGC	5 cut(s)	116, 175, 732, 1204, 1624
Csp6I	GTAC	6 cut(s)	418, 898, 1123, 1579, 1804, 1857
CspAI	ACCGGT	1 cut(s)	431
CviAII	CATG	5 cut(s)	1213, 1306, 1337, 1946, 1963
CviQI	GTAC	6 cut(s)	418, 898, 1123, 1579, 1804, 1857
DdeI	CTNAG	6 cut(s)	85, 252, 266, 603, 1076, 1232
DinI	GGCGCC	1 cut(s)	1563
DpnI	GATC	4 cut(s)	411, 688, 1875, 1910
DpnII	GATC	4 cut(s)	409, 686, 1873, 1908
DrdI	GACNNNNNNGTC	1 cut(s)	1621
DseDI	GACNNNNNNGTC	1 cut(s)	1621
EaeI	YGGCCR	3 cut(s)	817, 924, 1880
EagI	CGGCCG	1 cut(s)	817
Eam1104I	CTCTTC	2 cut(s)	341, 395
EarI	CTCTTC	2 cut(s)	341, 395
EciI	GGCGGA	6 cut(s)	383, 470, 928, 991, 1103, 1540
EclXI	CGGCCG	1 cut(s)	817
Eco147I	AGGCCT	1 cut(s)	210
Eco24I	GRGCYC	2 cut(s)	297, 995
Eco31I	GGTCTC	1 cut(s)	635
Eco47I	GGWCC	2 cut(s)	1374, 1729
Eco52I	CGGCCG	1 cut(s)	817
Eco57I	CTGAAG	1 cut(s)	293
Eco72I	CACGTG	1 cut(s)	129
Eco88I	CYCGRG	1 cut(s)	625
EcoO109I	RGGNCCY	1 cut(s)	1349
EcoRI	GAATTC	1 cut(s)	784
EcoRII	CCWGG	4 cut(s)	537, 1351, 1379, 1893
EcoT38I	GRGCYC	2 cut(s)	297, 995
EgeI	GGCGCC	1 cut(s)	1563
EheI	GGCGCC	1 cut(s)	1563
Esp3I	CGTCTC	5 cut(s)	193, 290, 556, 569, 959
FaeI	CATG	5 cut(s)	1216, 1309, 1340, 1949, 1966
FalI	AAGNNNNNCTT	3 cut(s)	34, 320, 352
FaqI	GGGAC	1 cut(s)	1129
FatI	CATG	5 cut(s)	1212, 1305, 1336, 1945, 1962
FauI	CCCGC	6 cut(s)	185, 200, 379, 1568, 1691, 1984
FbaI	TGATCA	1 cut(s)	1873
FblI	GTMKAC	1 cut(s)	981
FokI	GGATG	3 cut(s)	1151, 1187, 1706
FriOI	GRGCYC	2 cut(s)	297, 995
FspBI	CTAG	1 cut(s)	1275
GlaI	GCGC	4 cut(s)	78, 1563, 1585, 1953
GsaI	CCCAGC	3 cut(s)	1009, 1100, 1226
GsuI	CTGGAG	3 cut(s)	521, 1085, 1676
HaeII	RGCGCY	2 cut(s)	1565, 1955
HaeIII	GGCC	9 cut(s)	98, 210, 295, 519, 819, 926, 1350, 1418, 1882
HgaI	GACGC	5 cut(s)	116, 175, 732, 1204, 1624
HhaI	GCGC	4 cut(s)	79, 1564, 1586, 1954
Hin1I	GRCGYC	3 cut(s)	108, 383, 1562
Hin1II	CATG	5 cut(s)	1216, 1309, 1340, 1949, 1966
Hin6I	GCGC	4 cut(s)	77, 1562, 1584, 1952
HinP1I	GCGC	4 cut(s)	77, 1562, 1584, 1952
HincII	GTYRAC	3 cut(s)	240, 454, 1665
HindII	GTYRAC	3 cut(s)	240, 454, 1665
HindIII	AAGCTT	2 cut(s)	956, 1318
HpaI	GTTAAC	1 cut(s)	240
HphI	GGTGA	8 cut(s)	310, 446, 458, 1171, 1768, 1912, 1929, 1965
Hpy166II	GTNNAC	9 cut(s)	240, 454, 649, 798, 982, 1600, 1665, 1729, 1770
Hpy188I	TCNGA	9 cut(s)	106, 145, 260, 604, 753, 1516, 1523, 1627, 1987
Hpy188III	TCNNGA	8 cut(s)	302, 443, 529, 789, 1018, 1114, 1589, 1946
Hpy8I	GTNNAC	9 cut(s)	240, 454, 649, 798, 982, 1600, 1665, 1729, 1770
Hpy99I	CGWCG	6 cut(s)	106, 449, 991, 1561, 1864, 1916
HpyCH4III	ACNGT	5 cut(s)	284, 563, 736, 1460, 1604
HpyCH4V	TGCA	6 cut(s)	153, 174, 1394, 1406, 1840, 1847
HpyF3I	CTNAG	6 cut(s)	85, 252, 266, 603, 1076, 1232
Hsp92I	GRCGYC	3 cut(s)	108, 383, 1562
Hsp92II	CATG	5 cut(s)	1216, 1309, 1340, 1949, 1966
HspAI	GCGC	4 cut(s)	77, 1562, 1584, 1952
KasI	GGCGCC	1 cut(s)	1561
Kpn2I	TCCGGA	1 cut(s)	1588
KpnI	GGTACC	1 cut(s)	1582
KroI	GCCGGC	1 cut(s)	722
KroNI	GCCGGC	1 cut(s)	724
Ksp22I	TGATCA	1 cut(s)	1873
KspAI	GTTAAC	1 cut(s)	240
KspI	CCGCGG	2 cut(s)	223, 1568
Kzo9I	GATC	4 cut(s)	409, 686, 1873, 1908
Lsp1109I	GCAGC	7 cut(s)	17, 738, 960, 1219, 1275, 1390, 1406
LweI	GCATC	3 cut(s)	858, 1083, 1165
MaeI	CTAG	1 cut(s)	1275
MaeIII	GTNAC	8 cut(s)	278, 384, 664, 801, 1460, 1612, 1935, 1971
MalI	GATC	4 cut(s)	411, 688, 1875, 1910
MbiI	CCGCTC	1 cut(s)	82
MboI	GATC	4 cut(s)	409, 686, 1873, 1908
MflI	RGATCY	1 cut(s)	686
MhlI	GDGCHC	4 cut(s)	297, 643, 995, 1441
MluCI	AATT	2 cut(s)	784, 1389
Mly113I	GGCGCC	1 cut(s)	1562
MlyI	GAGTC	8 cut(s)	65, 140, 174, 244, 457, 614, 1518, 1979
MmeI	TCCRAC	6 cut(s)	84, 138, 168, 776, 1539, 1965
MroI	TCCGGA	1 cut(s)	1588
MroNI	GCCGGC	1 cut(s)	722
MseI	TTAA	3 cut(s)	239, 1242, 1446
MslI	CAYNNNNRTG	1 cut(s)	1217
MspA1I	CMGCKG	4 cut(s)	222, 654, 1567, 1879
MspCI	CTTAAG	1 cut(s)	1445
Mva1269I	GAATGC	1 cut(s)	1532
MvaI	CCWGG	4 cut(s)	539, 1353, 1381, 1895
MvnI	CGCG	7 cut(s)	77, 186, 222, 236, 1567, 1584, 1923
NaeI	GCCGGC	1 cut(s)	724
NarI	GGCGCC	1 cut(s)	1562
NciI	CCSGG	6 cut(s)	244, 292, 626, 627, 684, 1669
NdeII	GATC	4 cut(s)	409, 686, 1873, 1908
NgoMIV	GCCGGC	1 cut(s)	722
NlaIII	CATG	5 cut(s)	1216, 1309, 1340, 1949, 1966
NlaIV	GGNNCC	6 cut(s)	226, 295, 688, 1331, 1563, 1580
NmeAIII	GCCGAG	6 cut(s)	533, 902, 1064, 1508, 1761, 1801
NmuCI	GTSAC	5 cut(s)	384, 801, 1612, 1935, 1971
NspI	RCATGY	1 cut(s)	1309
PagI	TCATGA	1 cut(s)	1945
PceI	AGGCCT	1 cut(s)	210
PcsI	WCGNNNNNNNCGW	1 cut(s)	210
PctI	GAATGC	1 cut(s)	1532
PdiI	GCCGGC	1 cut(s)	724
PfeI	GAWTC	5 cut(s)	498, 532, 577, 1918, 1958
PflFI	GACNNNGTC	2 cut(s)	449, 1969
PfoI	TCCNGGA	1 cut(s)	537
PinAI	ACCGGT	1 cut(s)	431
PleI	GAGTC	8 cut(s)	65, 140, 173, 244, 457, 613, 1518, 1978
PluTI	GGCGCC	1 cut(s)	1565
PmaCI	CACGTG	1 cut(s)	129
PmlI	CACGTG	1 cut(s)	129
PpsI	GAGTC	8 cut(s)	65, 140, 173, 244, 457, 613, 1518, 1978
Ppu21I	YACGTR	1 cut(s)	129
Psp1406I	AACGTT	1 cut(s)	1479
Psp6I	CCWGG	4 cut(s)	537, 1351, 1379, 1893
PspCI	CACGTG	1 cut(s)	129
PspFI	CCCAGC	3 cut(s)	1005, 1096, 1222
PspGI	CCWGG	4 cut(s)	537, 1351, 1379, 1893
PspN4I	GGNNCC	6 cut(s)	226, 295, 688, 1331, 1563, 1580
PspOMI	GGGCCC	1 cut(s)	293
PspPI	GGNCC	5 cut(s)	293, 294, 1349, 1374, 1729
PsrI	GAACNNNNNNTAC	2 cut(s)	551, 583
PstNI	CAGNNNCTG	1 cut(s)	1434
PsuI	RGATCY	1 cut(s)	686
PsyI	GACNNNGTC	2 cut(s)	449, 1969
PvuII	CAGCTG	1 cut(s)	654
RsaI	GTAC	6 cut(s)	419, 899, 1124, 1580, 1805, 1858
RsaNI	GTAC	6 cut(s)	418, 898, 1123, 1579, 1804, 1857
RseI	CAYNNNNRTG	1 cut(s)	1217
SacII	CCGCGG	2 cut(s)	223, 1568
SaqAI	TTAA	3 cut(s)	239, 1242, 1446
Sau3AI	GATC	4 cut(s)	409, 686, 1873, 1908
Sau96I	GGNCC	5 cut(s)	293, 294, 1349, 1374, 1729
SchI	GAGTC	8 cut(s)	65, 140, 174, 244, 457, 614, 1518, 1979
SduI	GDGCHC	4 cut(s)	297, 643, 995, 1441
SfaNI	GCATC	3 cut(s)	858, 1083, 1165
SfoI	GGCGCC	1 cut(s)	1563
Sfr303I	CCGCGG	2 cut(s)	223, 1568
SgrBI	CCGCGG	2 cut(s)	223, 1568
SinI	GGWCC	2 cut(s)	1374, 1729
SmaI	CCCGGG	1 cut(s)	627
SmiMI	CAYNNNNRTG	1 cut(s)	1217
SmlI	CTYRAG	4 cut(s)	326, 1169, 1255, 1445
SmoI	CTYRAG	4 cut(s)	326, 1169, 1255, 1445
Sse9I	AATT	2 cut(s)	784, 1389
SseBI	AGGCCT	1 cut(s)	210
SspDI	GGCGCC	1 cut(s)	1561
SspMI	CTAG	1 cut(s)	1275
StuI	AGGCCT	1 cut(s)	210
TaaI	ACNGT	5 cut(s)	284, 563, 736, 1460, 1604
TasI	AATT	2 cut(s)	784, 1389
TatI	WGTACW	1 cut(s)	897
TfiI	GAWTC	5 cut(s)	498, 532, 577, 1918, 1958
Tru1I	TTAA	3 cut(s)	239, 1242, 1446
Tru9I	TTAA	3 cut(s)	239, 1242, 1446
TscAI	CASTG	1 cut(s)	1371
TseFI	GTSAC	5 cut(s)	384, 801, 1612, 1935, 1971
TseI	GCWGC	7 cut(s)	5, 726, 948, 1207, 1288, 1394, 1403
Tsp45I	GTSAC	5 cut(s)	384, 801, 1612, 1935, 1971
TspDTI	ATGAA	3 cut(s)	747, 1325, 1411
TspGWI	ACGGA	3 cut(s)	769, 983, 1982
TspMI	CCCGGG	1 cut(s)	625
TspRI	CASTG	1 cut(s)	1371
Tth111I	GACNNNGTC	2 cut(s)	449, 1969
Vha464I	CTTAAG	1 cut(s)	1445
VpaK11BI	GGWCC	2 cut(s)	1374, 1729
XapI	RAATTY	1 cut(s)	784
XceI	RCATGY	1 cut(s)	1309
XmaI	CCCGGG	1 cut(s)	625
XmiI	GTMKAC	1 cut(s)	981
XspI	CTAG	1 cut(s)	1275
ZraI	GACGTC	1 cut(s)	384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.