Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0007709

Physical Location & Seq

Genomic Coordinates Reverse (-)

9365320 .. 9368619

Gene Structure 3300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006655

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGGTAAAACTAATAAACTCACGCTTTAGTCATGATGCCAGCGCCCTGACCTCCACGTGTCGCCATCTCGTCCCATCAATCTCATTAACCCACAACACAGTCATTAATATCAACGGCCAGATGGATGTGACGGTAACGTATCCCACTCATGTACGTGAAAACGACATAGATTCCGAGCGTTACAACTACTCACCGGACACTGGCACTGAAACGTCAAGGGCATCACTGTCATTTCAGGTCAAATCACCCCCCACAGTAAAACCAAGTACAATGTTACCTGCTTTTCCAGACCTCCAGGCTCCAGCTCTTTTCAATATACACTATGCCCCTCAACTTCCCATTAATTACGTTCATACCCTATCCCCTCTATTTTTCACTACCTCACTCCCTCTGCTCTCATTTGCAGAGACAGTAATGGCAGCCAAGGCCTTCTTCTTCTTTCTCTCTCTACTATTTCTCATTATCTCTCTAATCCACGCAACTTCAAACCCAGATTCCGAGCCTCTCTTAGCGTTCAAGGCCACGTCGGACGCTTCCAATGCTCTCGCCACGTGGAACTCTTCCTCCGACCCGTGCACCAACTGGGCCGGAGTCTCCTGCACCCGGAGCCGGGTATCCAGGCTCGTCCTCGAGAACCTCGGCCTTAGCGGCTCGTTCGCAGGGCTGACCGGTTTGACTCAGCTCCGAGTTCTCAGCCTGAAGCGGAACCGCCTCTCCGGCCCCATTCCCGACCTCTCTAACCTCACATCCCTCAAGCTCCTCTTCCTCTCCTACAACGACTTCTCCGGCGACTTTCCCGCTTCCGTAACGTCTCTTTTCCGGCTTCACCGCCTCGATCTCGCCTACAACAACTTGTCCAGTGAAATTCCCGAGACGGTCAACCATTTGACTCATCTCCTCACTCTCCGCCTCGAAGCTAACCGATTTTCCGGCTCGATTTCCGGCCTCAACATCCCTAACCTCCAGGAGTTCAACGTCTCGGCTAACCGTTTGTCCGGCGAAATTCCCAAGTCGTTGTCTATTTTCTCCGAGTCTGCATTTGCGCAAAACCCGGGTCTGTGCGGGTCTCCGGTTCAGAACTGTAAAACAGAAACCGACCCTACTCGACCCGGAGGAGCTATTGCGTCTCCTGTAATTCCTGCCGGAAACCCAACCGTAGTGGCGTCCTCACCGACTTCATTGCCATCAAGCTCTACGCCCACCAAATCGGAAAAGTCGACATCCCACCACAATGGAGGTTCCAAAATTAGTCCGGTGGCTCTGATCGCCATAATAGTCGGCGACGTGTTGGTCCTCTTTTTGGTCTCGCTGCTGCTCTACTGCTACTTCTGGAGGAACTTCGCGGCCAAAATGCGGCAGGGCAAGAGCAGCTCCAAGCTTCTGGAGACAGAGAAGATAGTCTACTCGTCGAGCCCATACTCGGCCCAGCCCTCTTTCGAGAGGGGACAGATGGTGTTTTTCGAAGGCGTGAAGCGTTTCGAGCTGGAGGACTTGCTGAGAGCCTCGGCGGAGATGTTGGGGAAAGGTGGGTTCGGGACGGCGTACAAGGCGGTTTTGGACGACGGCAATGTTGTGGCGGTGAAGAGGCTCAAGGATGCTCAAATTGGTGGGAAGAATCAGTTTGAGCAGCACATGGCGGTGCTGGGCAAGCTTAACCATCTCAACATTGTGAGCTTGCGGGCTTATTATTTCGCTAGGGAGGAGAAGTTGCTGGTCTACGATTACATGCCAAATGGAAGCTTGTTTTGGCTTCTTCATGGTAACAGAGGACCTGGAAGAACCCCACTGGACTGGACCACCAGACTGAAAATTGCAGCCGGAGCTGCACGAGGGCTAGCTTTCATTCACTGCTCCTGCGCTTCCCTTAAGCTCACCCACGGCAACATCAAATCCACCAACATTCTCTTGGACAAGACCGGCAATGCTCGTGTCTCCGACTTCGGACTTTCGGCTTTTTCGCCTTCCTCTTCCGCCGCGGCGGCCCCGCGGTCGTGCGGGTACCGCGCTCCCGAGTTGGTGGAGGGTCGGAAAGTAACGCAGAAGTCGGACGTGTATGCTTTCGGTGTTCTTTTGCTGGAGATATTGACCGGGAAATGCCCGTCCGCGGTGGTGGATGGAGGGTCCGGAGGTGGCTACGGCGGGTTGGTGGACCTGCCGAGGTGGGTTCAGTCAGTGGTGAGAGAGGAGTGGACTGCCGAGGTGTTTGACTTGGAGTTGATGAGGTACAAGGATATTGAGGAGGAGATGGTGGGGCTTTTGCAGGTTGCAATGGTTTGCACAACGGCAGTGCCTGATCAACGGCCGAGGATGAGCCAGGTGGTGAAGATGATCGACGAGATTCGCGGCGTGGCGGGGTCGCCGCCTCATGAGGCGTTTGATTCCATGACGGAGTCGCCGGCTTTGTCCGAGGACACTTGCGGAGCAAGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 Pkinase Pkinase_Tyr

Protein Analysis

811

Amino Acids

87.84

Weight (kDa)

7.91

Isoelectric Point (pI)

43.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	163 - 201	1.5e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	225 - 314	2.6e-07	Leucine-rich repeat region
PK_Tyr_Ser-Thr	PF07714	504 - 776	8.5e-36	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	504 - 703	1.2e-35	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68400
fragaria_vesca	FvH4_4g26930 FvH4_4g26970
malus_domestica	MD13G1036800.v1.1 MD13G1038100.v1.1 MD13G1038400.v1.1 MD13G1260200.v1.1
prunus_persica	Prupe.1G314900_v2.0.a1
pyrus_communis	pycom13g03310 pycom13g03320 pycom16g03410
rosa_chinensis	RchiOBHm_Chr4g0434721
rosa_laevigata	RLG00000006655
rosa_multiflora	Rmu_sc0004538.1_g000001 Rmu_sc0008439.1_g000001 Rmu_sc0017904.1_g000007
rosa_roxburghii	Rroxscaffold_5G00375930
rosa_rugosa	Rorug04G0277800
rosa_samantha	Rh4AG334200 Rh4BG342600 Rh4CG357000 Rh4DG336300
rosa_wichuraiana	Rw4G029010 Rw4G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1289
Acc16I	TGCGCA	1 cut(s)	1044
Acc36I	ACCTGC	3 cut(s)	286, 2160, 2251
Acc65I	GGTACC	1 cut(s)	1998
AccB1I	GGYRCC	1 cut(s)	1998
AccI	GTMKAC	3 cut(s)	1217, 1401, 1716
AccII	CGCG	6 cut(s)	1343, 1976, 1987, 2004, 2105, 2343
AccIII	TCCGGA	1 cut(s)	2123
AcoI	YGGCCR	3 cut(s)	115, 1344, 2300
AcsI	RAATTY	2 cut(s)	864, 1002
AcuI	CTGAAG	1 cut(s)	719
AcvI	CACGTG	2 cut(s)	57, 552
AcyI	GRCGYC	1 cut(s)	1163
AfaI	GTAC	5 cut(s)	153, 268, 1544, 2000, 2225
AfiI	CCNNNNNNNGG	8 cut(s)	200, 603, 609, 610, 1300, 1353, 1420, 2104
AflII	CTTAAG	1 cut(s)	1865
AflIII	ACRYGT	3 cut(s)	56, 1284, 2049
AgeI	ACCGGT	1 cut(s)	668
AgsI	TTSAA	4 cut(s)	313, 486, 517, 973
AjiI	CACGTC	3 cut(s)	525, 1285, 2050
AjnI	CCWGG	5 cut(s)	294, 617, 963, 1771, 2313
AjuI	GAANNNNNNNTTGG	4 cut(s)	416, 448, 1729, 1761
AloI	GAACNNNNNNTCC	4 cut(s)	548, 580, 698, 730
Alw21I	GWGCWC	1 cut(s)	578
Alw44I	GTGCAC	1 cut(s)	574
AlwNI	CAGNNNCTG	1 cut(s)	2291
Ama87I	CYCGRG	4 cut(s)	629, 869, 1051, 2009
Aor13HI	TCCGGA	1 cut(s)	2123
ApaLI	GTGCAC	1 cut(s)	574
ApeKI	GCWGC	7 cut(s)	419, 1309, 1312, 1368, 1627, 1814, 1823
ApoI	RAATTY	2 cut(s)	864, 1002
ArsI	GACNNNNNNTTYG	2 cut(s)	1039, 1071
AseI	ATTAAT	2 cut(s)	105, 342
AsiGI	ACCGGT	1 cut(s)	668
Asp700I	GAANNNNTTC	1 cut(s)	1475
Asp718I	GGTACC	1 cut(s)	1998
AspLEI	GCGC	4 cut(s)	44, 1045, 1859, 2006
AspS9I	GGNCC	9 cut(s)	585, 719, 1291, 1423, 1769, 1794, 1981, 2121, 2149
AsuC2I	CCSGG	6 cut(s)	604, 611, 1052, 1053, 1110, 2089
AsuHPI	GGTGA	8 cut(s)	183, 237, 818, 1161, 1591, 1864, 2188, 2332
AsuII	TTCGAA	1 cut(s)	1461
AsuNHI	GCTAGC	1 cut(s)	1834
AvaI	CYCGRG	4 cut(s)	629, 869, 1051, 2009
AvaII	GGWCC	5 cut(s)	1291, 1769, 1794, 2121, 2149
BaeGI	GKGCMC	1 cut(s)	578
BanI	GGYRCC	1 cut(s)	1998
BanII	GRGCYC	1 cut(s)	1415
BarI	GAAGNNNNNNTAC	2 cut(s)	1385, 1417
BauI	CACGAG	2 cut(s)	1827, 1926
BbrPI	CACGTG	2 cut(s)	57, 552
Bbv12I	GWGCWC	1 cut(s)	578
BbvI	GCAGC	7 cut(s)	431, 1296, 1299, 1380, 1639, 1810, 1826
BccI	CCATC	8 cut(s)	72, 82, 115, 1192, 1444, 1665, 2108, 2239
BceAI	ACGGC	7 cut(s)	130, 1554, 1579, 1894, 2152, 2298, 2315
BcgI	CGANNNNNNTGC	2 cut(s)	1162, 1196
BciT130I	CCWGG	5 cut(s)	296, 619, 965, 1773, 2315
BciVI	GTATCC	2 cut(s)	150, 625
BclI	TGATCA	1 cut(s)	2293
BcnI	CCSGG	6 cut(s)	604, 611, 1052, 1053, 1110, 2089
BfaI	CTAG	2 cut(s)	1695, 1835
BfoI	RGCGCY	1 cut(s)	45
BfrI	CTTAAG	1 cut(s)	1865
BfuAI	ACCTGC	3 cut(s)	286, 2160, 2251
BfuI	GTATCC	2 cut(s)	150, 625
BglI	GCCNNNNNGGC	3 cut(s)	648, 717, 1979
Bme18I	GGWCC	5 cut(s)	1291, 1769, 1794, 2121, 2149
BmeT110I	CYCGRG	4 cut(s)	629, 869, 1051, 2009
BmgBI	CACGTC	3 cut(s)	525, 1285, 2050
BmgT120I	GGNCC	9 cut(s)	585, 719, 1291, 1423, 1769, 1794, 1981, 2121, 2149
BmiI	GGNNCC	8 cut(s)	300, 608, 707, 721, 1240, 1983, 2000, 2122
BmrI	ACTGGG	1 cut(s)	592
BmsI	GCATC	3 cut(s)	25, 230, 1585
BmtI	GCTAGC	1 cut(s)	1838
BmuI	ACTGGG	1 cut(s)	592
BpmI	CTGGAG	7 cut(s)	278, 285, 947, 1351, 1403, 1505, 2096
Bpu10I	CCTNAGC	1 cut(s)	644
Bpu14I	TTCGAA	1 cut(s)	1461
BpuEI	CTTGAG	2 cut(s)	737, 1574
BpuMI	CCSGG	6 cut(s)	604, 611, 1052, 1053, 1110, 2089
BsaAI	YACGTR	3 cut(s)	57, 155, 552
BsaHI	GRCGYC	1 cut(s)	1163
BsaI	GGTCTC	2 cut(s)	1071, 1309
BsaWI	WCCGGW	5 cut(s)	193, 668, 1069, 1252, 2123
BsaXI	ACNNNNNCTCC	8 cut(s)	548, 578, 698, 728, 767, 797, 1691, 1721
Bsc4I	CCNNNNNNNGG	8 cut(s)	200, 603, 609, 610, 1300, 1353, 1420, 2104
Bse118I	RCCGGY	3 cut(s)	668, 1916, 2395
Bse1I	ACTGG	5 cut(s)	205, 587, 858, 1791, 1796
Bse3DI	GCAATG	4 cut(s)	1178, 1573, 1927, 2274
BseAI	TCCGGA	1 cut(s)	2123
BseBI	CCWGG	5 cut(s)	296, 619, 965, 1773, 2315
BseGI	GGATG	7 cut(s)	130, 746, 951, 1220, 1600, 2119, 2313
BseLI	CCNNNNNNNGG	8 cut(s)	200, 603, 609, 610, 1300, 1353, 1420, 2104
BseMI	GCAATG	4 cut(s)	1178, 1573, 1927, 2274
BseMII	CTCAG	3 cut(s)	692, 706, 1487
BseNI	ACTGG	5 cut(s)	205, 587, 858, 1791, 1796
BseRI	GAGGAG	7 cut(s)	749, 887, 1128, 1715, 2198, 2252, 2255
BseSI	GKGCMC	1 cut(s)	578
BseX3I	CGGCCG	1 cut(s)	2300
BseXI	GCAGC	7 cut(s)	431, 1296, 1299, 1380, 1639, 1810, 1826
BseYI	CCCAGC	2 cut(s)	1425, 1642
BsgI	GTGCAG	2 cut(s)	583, 1809
Bsh1236I	CGCG	6 cut(s)	1343, 1976, 1987, 2004, 2105, 2343
Bsh1285I	CGRYCG	2 cut(s)	1991, 2303
BshNI	GGYRCC	1 cut(s)	1998
BshTI	ACCGGT	1 cut(s)	668
BsiEI	CGRYCG	2 cut(s)	1991, 2303
BsiHKAI	GWGCWC	1 cut(s)	578
BsiHKCI	CYCGRG	4 cut(s)	629, 869, 1051, 2009
BslFI	GGGAC	3 cut(s)	56, 1458, 1549
BslI	CCNNNNNNNGG	8 cut(s)	200, 603, 609, 610, 1300, 1353, 1420, 2104
BsmBI	CGTCTC	4 cut(s)	816, 866, 982, 1131
BsmFI	GGGAC	3 cut(s)	56, 1458, 1549
Bso31I	GGTCTC	2 cut(s)	1071, 1309
BsoBI	CYCGRG	4 cut(s)	629, 869, 1051, 2009
Bsp119I	TTCGAA	1 cut(s)	1461
Bsp1286I	GDGCHC	2 cut(s)	578, 1415
Bsp13I	TCCGGA	1 cut(s)	2123
Bsp143I	GATC	4 cut(s)	835, 1263, 2293, 2328
BspCNI	CTCAG	3 cut(s)	691, 705, 1488
BspEI	TCCGGA	1 cut(s)	2123
BspFNI	CGCG	6 cut(s)	1343, 1976, 1987, 2004, 2105, 2343
BspHI	TCATGA	2 cut(s)	31, 2365
BspLI	GGNNCC	8 cut(s)	300, 608, 707, 721, 1240, 1983, 2000, 2122
BspMI	ACCTGC	3 cut(s)	286, 2160, 2251
BspOI	GCTAGC	1 cut(s)	1838
BspT104I	TTCGAA	1 cut(s)	1461
BspT107I	GGYRCC	1 cut(s)	1998
BspTI	CTTAAG	1 cut(s)	1865
BspTNI	GGTCTC	2 cut(s)	1071, 1309
BsrDI	GCAATG	4 cut(s)	1178, 1573, 1927, 2274
BsrFI	RCCGGY	3 cut(s)	668, 1916, 2395
BsrI	ACTGG	5 cut(s)	205, 587, 858, 1791, 1796
BssAI	RCCGGY	3 cut(s)	668, 1916, 2395
BssMI	GATC	4 cut(s)	835, 1263, 2293, 2328
BssNI	GRCGYC	1 cut(s)	1163
BssSI	CACGAG	2 cut(s)	1827, 1926
BssT1I	CCWWGG	1 cut(s)	423
Bst2BI	CACGAG	2 cut(s)	1827, 1926
Bst2UI	CCWGG	5 cut(s)	296, 619, 965, 1773, 2315
Bst4CI	ACNGT	9 cut(s)	100, 133, 228, 256, 412, 877, 989, 1082, 1156
Bst6I	CTCTTC	4 cut(s)	565, 767, 1577, 1972
BstACI	GRCGYC	1 cut(s)	1163
BstAFI	CTTAAG	1 cut(s)	1865
BstBAI	YACGTR	3 cut(s)	57, 155, 552
BstBI	TTCGAA	1 cut(s)	1461
BstC8I	GCNNGC	6 cut(s)	40, 1649, 1676, 1680, 1836, 2397
BstDEI	CTNAG	5 cut(s)	508, 644, 678, 692, 1496
BstDSI	CCRYGG	4 cut(s)	1876, 1974, 1985, 2103
BstF5I	GGATG	7 cut(s)	130, 746, 951, 1220, 1600, 2119, 2313
BstFNI	CGCG	6 cut(s)	1343, 1976, 1987, 2004, 2105, 2343
BstH2I	RGCGCY	1 cut(s)	45
BstHHI	GCGC	4 cut(s)	44, 1045, 1859, 2006
BstKTI	GATC	4 cut(s)	838, 1266, 2296, 2331
BstMBI	GATC	4 cut(s)	835, 1263, 2293, 2328
BstMCI	CGRYCG	2 cut(s)	1991, 2303
BstNI	CCWGG	5 cut(s)	296, 619, 965, 1773, 2315
BstNSI	RCATGY	1 cut(s)	1729
BstSLI	GKGCMC	1 cut(s)	578
BstUI	CGCG	6 cut(s)	1343, 1976, 1987, 2004, 2105, 2343
BstV1I	GCAGC	7 cut(s)	431, 1296, 1299, 1380, 1639, 1810, 1826
BstXI	CCANNNNNNTGG	3 cut(s)	1232, 1381, 1791
BstZI	CGGCCG	1 cut(s)	2300
BsuI	GTATCC	2 cut(s)	150, 625
BtgI	CCRYGG	4 cut(s)	1876, 1974, 1985, 2103
BtrI	CACGTC	3 cut(s)	525, 1285, 2050
BtsCI	GGATG	7 cut(s)	130, 746, 951, 1220, 1600, 2119, 2313
BtsI	GCAGTG	2 cut(s)	1846, 2292
BtsIMutI	CAGTG	8 cut(s)	198, 204, 224, 865, 1784, 1846, 2178, 2292
BveI	ACCTGC	3 cut(s)	286, 2160, 2251
Cac8I	GCNNGC	6 cut(s)	40, 1649, 1676, 1680, 1836, 2397
CaiI	CAGNNNCTG	1 cut(s)	2291
CciI	TCATGA	2 cut(s)	31, 2365
CfoI	GCGC	4 cut(s)	44, 1045, 1859, 2006
Cfr10I	RCCGGY	3 cut(s)	668, 1916, 2395
Cfr13I	GGNCC	9 cut(s)	585, 719, 1291, 1423, 1769, 1794, 1981, 2121, 2149
Cfr42I	CCGCGG	3 cut(s)	1977, 1988, 2106
Cfr9I	CCCGGG	1 cut(s)	1051
CseI	GACGC	3 cut(s)	539, 1113, 1152
Csp6I	GTAC	5 cut(s)	152, 267, 1543, 1999, 2224
CspAI	ACCGGT	1 cut(s)	668
CspCI	CAANNNNNGTGG	2 cut(s)	1140, 1175
CviAII	CATG	7 cut(s)	32, 149, 1633, 1726, 1757, 2366, 2383
CviQI	GTAC	5 cut(s)	152, 267, 1543, 1999, 2224
DdeI	CTNAG	5 cut(s)	508, 644, 678, 692, 1496
DpnI	GATC	4 cut(s)	837, 1265, 2295, 2330
DpnII	GATC	4 cut(s)	835, 1263, 2293, 2328
DrdI	GACNNNNNNGTC	1 cut(s)	1289
DseDI	GACNNNNNNGTC	1 cut(s)	1289
EaeI	YGGCCR	3 cut(s)	115, 1344, 2300
EagI	CGGCCG	1 cut(s)	2300
Eam1104I	CTCTTC	4 cut(s)	565, 767, 1577, 1972
EarI	CTCTTC	4 cut(s)	565, 767, 1577, 1972
EciI	GGCGGA	3 cut(s)	896, 1523, 1960
EclXI	CGGCCG	1 cut(s)	2300
Eco130I	CCWWGG	1 cut(s)	423
Eco147I	AGGCCT	1 cut(s)	428
Eco24I	GRGCYC	1 cut(s)	1415
Eco31I	GGTCTC	2 cut(s)	1071, 1309
Eco47I	GGWCC	5 cut(s)	1291, 1769, 1794, 2121, 2149
Eco52I	CGGCCG	1 cut(s)	2300
Eco57I	CTGAAG	1 cut(s)	719
Eco72I	CACGTG	2 cut(s)	57, 552
Eco88I	CYCGRG	4 cut(s)	629, 869, 1051, 2009
EcoO109I	RGGNCCY	1 cut(s)	1769
EcoRII	CCWGG	5 cut(s)	294, 617, 963, 1771, 2313
EcoT14I	CCWWGG	1 cut(s)	423
EcoT38I	GRGCYC	1 cut(s)	1415
ErhI	CCWWGG	1 cut(s)	423
Esp3I	CGTCTC	4 cut(s)	816, 866, 982, 1131
FaeI	CATG	7 cut(s)	35, 152, 1636, 1729, 1760, 2369, 2386
FalI	AAGNNNNNCTT	4 cut(s)	416, 448, 746, 778
FaqI	GGGAC	3 cut(s)	56, 1458, 1549
FatI	CATG	7 cut(s)	31, 148, 1632, 1725, 1756, 2365, 2382
FauI	CCCGC	7 cut(s)	805, 1055, 1671, 1988, 1992, 2132, 2344
FbaI	TGATCA	1 cut(s)	2293
FblI	GTMKAC	3 cut(s)	1217, 1401, 1716
FokI	GGATG	7 cut(s)	137, 733, 938, 1207, 1607, 2126, 2320
FriOI	GRGCYC	1 cut(s)	1415
FspBI	CTAG	2 cut(s)	1695, 1835
FspI	TGCGCA	1 cut(s)	1044
GlaI	GCGC	4 cut(s)	43, 1044, 1858, 2005
GsaI	CCCAGC	2 cut(s)	1429, 1646
GsuI	CTGGAG	7 cut(s)	278, 285, 947, 1351, 1403, 1505, 2096
HaeII	RGCGCY	1 cut(s)	45
HgaI	GACGC	3 cut(s)	539, 1113, 1152
HhaI	GCGC	4 cut(s)	44, 1045, 1859, 2006
Hin1I	GRCGYC	1 cut(s)	1163
Hin1II	CATG	7 cut(s)	35, 152, 1636, 1729, 1760, 2369, 2386
Hin6I	GCGC	4 cut(s)	42, 1043, 1857, 2004
HinP1I	GCGC	4 cut(s)	42, 1043, 1857, 2004
HincII	GTYRAC	2 cut(s)	880, 1218
HindII	GTYRAC	2 cut(s)	880, 1218
HindIII	AAGCTT	3 cut(s)	1376, 1649, 1738
HphI	GGTGA	8 cut(s)	183, 237, 818, 1161, 1591, 1864, 2188, 2332
Hpy166II	GTNNAC	7 cut(s)	576, 880, 1218, 1402, 1717, 2149, 2190
Hpy8I	GTNNAC	7 cut(s)	576, 880, 1218, 1402, 1717, 2149, 2190
Hpy99I	CGWCG	5 cut(s)	529, 1286, 1411, 1565, 2336
HpyAV	CCTTC	3 cut(s)	439, 1457, 1971
HpyCH4III	ACNGT	9 cut(s)	100, 133, 228, 256, 412, 877, 989, 1082, 1156
HpyCH4V	TGCA	9 cut(s)	404, 576, 600, 1037, 1814, 1826, 2260, 2267, 2277
HpyF3I	CTNAG	5 cut(s)	508, 644, 678, 692, 1496
Hsp92I	GRCGYC	1 cut(s)	1163
Hsp92II	CATG	7 cut(s)	35, 152, 1636, 1729, 1760, 2369, 2386
HspAI	GCGC	4 cut(s)	42, 1043, 1857, 2004
Kpn2I	TCCGGA	1 cut(s)	2123
KpnI	GGTACC	1 cut(s)	2002
KroI	GCCGGC	1 cut(s)	2395
KroNI	GCCGGC	1 cut(s)	2397
Ksp22I	TGATCA	1 cut(s)	2293
KspI	CCGCGG	3 cut(s)	1977, 1988, 2106
Kzo9I	GATC	4 cut(s)	835, 1263, 2293, 2328
Lsp1109I	GCAGC	7 cut(s)	431, 1296, 1299, 1380, 1639, 1810, 1826
LweI	GCATC	3 cut(s)	25, 230, 1585
MaeI	CTAG	2 cut(s)	1695, 1835
MaeIII	GTNAC	7 cut(s)	127, 133, 179, 273, 805, 1760, 2032
MalI	GATC	4 cut(s)	837, 1265, 2295, 2330
MboI	GATC	4 cut(s)	835, 1263, 2293, 2328
MhlI	GDGCHC	2 cut(s)	578, 1415
MluCI	AATT	7 cut(s)	343, 864, 1002, 1134, 1245, 1602, 1809
MlyI	GAGTC	5 cut(s)	600, 670, 883, 1040, 2399
MmeI	TCCRAC	5 cut(s)	507, 591, 1959, 2006, 2025
MroI	TCCGGA	1 cut(s)	2123
MroNI	GCCGGC	1 cut(s)	2395
MroXI	GAANNNNTTC	1 cut(s)	1475
MseI	TTAA	5 cut(s)	86, 105, 342, 1653, 1866
MslI	CAYNNNNRTG	3 cut(s)	153, 1230, 1637
MspA1I	CMGCKG	3 cut(s)	1976, 1987, 2105
MspCI	CTTAAG	1 cut(s)	1865
MvaI	CCWGG	5 cut(s)	296, 619, 965, 1773, 2315
MvnI	CGCG	6 cut(s)	1343, 1976, 1987, 2004, 2105, 2343
NaeI	GCCGGC	1 cut(s)	2397
NciI	CCSGG	6 cut(s)	604, 611, 1052, 1053, 1110, 2089
NdeII	GATC	4 cut(s)	835, 1263, 2293, 2328
NgoMIV	GCCGGC	1 cut(s)	2395
NheI	GCTAGC	1 cut(s)	1834
NlaIII	CATG	7 cut(s)	35, 152, 1636, 1729, 1760, 2369, 2386
NlaIV	GGNNCC	8 cut(s)	300, 608, 707, 721, 1240, 1983, 2000, 2122
NmeAIII	GCCGAG	7 cut(s)	618, 959, 1400, 1484, 2181, 2221, 2328
NmuCI	GTSAC	1 cut(s)	127
NsbI	TGCGCA	1 cut(s)	1044
NspI	RCATGY	1 cut(s)	1729
NspV	TTCGAA	1 cut(s)	1461
PaeR7I	CTCGAG	1 cut(s)	629
PagI	TCATGA	2 cut(s)	31, 2365
PceI	AGGCCT	1 cut(s)	428
PcsI	WCGNNNNNNNCGW	1 cut(s)	1214
PdiI	GCCGGC	1 cut(s)	2397
PdmI	GAANNNNTTC	1 cut(s)	1475
PfeI	GAWTC	5 cut(s)	170, 494, 1615, 2338, 2378
PflFI	GACNNNGTC	1 cut(s)	2389
PfoI	TCCNGGA	1 cut(s)	963
PinAI	ACCGGT	1 cut(s)	668
PleI	GAGTC	5 cut(s)	599, 670, 883, 1039, 2398
PmaCI	CACGTG	2 cut(s)	57, 552
PmlI	CACGTG	2 cut(s)	57, 552
PpsI	GAGTC	5 cut(s)	599, 670, 883, 1039, 2398
Ppu21I	YACGTR	3 cut(s)	57, 155, 552
PpuMI	RGGWCCY	1 cut(s)	1769
PshBI	ATTAAT	2 cut(s)	105, 342
Psp5II	RGGWCCY	1 cut(s)	1769
Psp6I	CCWGG	5 cut(s)	294, 617, 963, 1771, 2313
PspCI	CACGTG	2 cut(s)	57, 552
PspFI	CCCAGC	2 cut(s)	1425, 1642
PspGI	CCWGG	5 cut(s)	294, 617, 963, 1771, 2313
PspN4I	GGNNCC	8 cut(s)	300, 608, 707, 721, 1240, 1983, 2000, 2122
PspPI	GGNCC	9 cut(s)	585, 719, 1291, 1423, 1769, 1794, 1981, 2121, 2149
PspPPI	RGGWCCY	1 cut(s)	1769
PstNI	CAGNNNCTG	1 cut(s)	2291
PsyI	GACNNNGTC	1 cut(s)	2389
RsaI	GTAC	5 cut(s)	153, 268, 1544, 2000, 2225
RsaNI	GTAC	5 cut(s)	152, 267, 1543, 1999, 2224
RseI	CAYNNNNRTG	3 cut(s)	153, 1230, 1637
SacII	CCGCGG	3 cut(s)	1977, 1988, 2106
SalI	GTCGAC	1 cut(s)	1216
SaqAI	TTAA	5 cut(s)	86, 105, 342, 1653, 1866
Sau3AI	GATC	4 cut(s)	835, 1263, 2293, 2328
Sau96I	GGNCC	9 cut(s)	585, 719, 1291, 1423, 1769, 1794, 1981, 2121, 2149
SchI	GAGTC	5 cut(s)	600, 670, 883, 1040, 2399
SduI	GDGCHC	2 cut(s)	578, 1415
SfaNI	GCATC	3 cut(s)	25, 230, 1585
Sfr274I	CTCGAG	1 cut(s)	629
Sfr303I	CCGCGG	3 cut(s)	1977, 1988, 2106
SfuI	TTCGAA	1 cut(s)	1461
SgrBI	CCGCGG	3 cut(s)	1977, 1988, 2106
SinI	GGWCC	5 cut(s)	1291, 1769, 1794, 2121, 2149
SlaI	CTCGAG	1 cut(s)	629
SmaI	CCCGGG	1 cut(s)	1053
SmiMI	CAYNNNNRTG	3 cut(s)	153, 1230, 1637
SmlI	CTYRAG	4 cut(s)	629, 752, 1589, 1865
SmoI	CTYRAG	4 cut(s)	629, 752, 1589, 1865
Sse9I	AATT	7 cut(s)	343, 864, 1002, 1134, 1245, 1602, 1809
SseBI	AGGCCT	1 cut(s)	428
SspMI	CTAG	2 cut(s)	1695, 1835
StuI	AGGCCT	1 cut(s)	428
StyI	CCWWGG	1 cut(s)	423
TaaI	ACNGT	9 cut(s)	100, 133, 228, 256, 412, 877, 989, 1082, 1156
TasI	AATT	7 cut(s)	343, 864, 1002, 1134, 1245, 1602, 1809
TatI	WGTACW	1 cut(s)	266
TauI	GCSGC	8 cut(s)	651, 1346, 1357, 1976, 1979, 1982, 2346, 2362
TfiI	GAWTC	5 cut(s)	170, 494, 1615, 2338, 2378
Tru1I	TTAA	5 cut(s)	86, 105, 342, 1653, 1866
Tru9I	TTAA	5 cut(s)	86, 105, 342, 1653, 1866
TscAI	CASTG	8 cut(s)	205, 211, 231, 865, 1791, 1853, 2178, 2292
TseFI	GTSAC	1 cut(s)	127
TseI	GCWGC	7 cut(s)	419, 1309, 1312, 1368, 1627, 1814, 1823
Tsp45I	GTSAC	1 cut(s)	127
TspDTI	ATGAA	4 cut(s)	341, 1167, 1745, 1831
TspGWI	ACGGA	2 cut(s)	793, 2402
TspMI	CCCGGG	1 cut(s)	1051
TspRI	CASTG	8 cut(s)	205, 211, 231, 865, 1791, 1853, 2178, 2292
Tth111I	GACNNNGTC	1 cut(s)	2389
Vha464I	CTTAAG	1 cut(s)	1865
VneI	GTGCAC	1 cut(s)	574
VpaK11BI	GGWCC	5 cut(s)	1291, 1769, 1794, 2121, 2149
VspI	ATTAAT	2 cut(s)	105, 342
XapI	RAATTY	2 cut(s)	864, 1002
XceI	RCATGY	1 cut(s)	1729
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1903
XhoI	CTCGAG	1 cut(s)	629
XmaI	CCCGGG	1 cut(s)	1051
XmiI	GTMKAC	3 cut(s)	1217, 1401, 1716
XmnI	GAANNNNTTC	1 cut(s)	1475
XspI	CTAG	2 cut(s)	1695, 1835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.