Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0007709

Physical Location & Seq

Genomic Coordinates Forward (+)

2551099 .. 2553676

Gene Structure 2578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1036800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGCAGCCACGGCCGCCGTGGCCACTCTTCTCCTCACGAGCTTCTTCTTCGCTGCTCTCCACGTCTCTTCGAATCCAGATACCAAACCTCTCCTATCATTCAAAGCAACGTCGGACGCATCCAACAAGCTCACCACGTGGAACTCCACCTCCGTTGACCCGTGCACCTGGACCGGCGTCTCCTGCACCAACAACCGAGTCTCCCGACTTGTTCTCGAGAACCTCGACCTCCGCGGCTCGTTCCAGCCACTCACCGCGCTAACTCAGCTCCGAGTTCTGAGCCTCAAGCGTAACCGCCTATCCGGCCCCATTCCGGACCTCTCCAACTTCACCGCCCTCAAACTCTTATTCCTCTCCTACAACGAACTCTCCGGCGACTTTCCAGCCTCCGTGTCCTCTCTCTTCCGCCTCTACCGCCTCGATCTGTCCTACAACAACCTATCCGGCAAGATTCCCGCAACGGTCAACCATTTGAATCATCTTCTCACTCTCCGGCTCGAGGCGAACCGTTTCTCCGGTTCGAGCTGCAAGGGTACACCAAACGACCCGACCCGGCCTGGATCTGACGGAGCCATTGCGTCTCCTGTAATGCCTGCTGCTAACCCAACCGTCGTAGCGTCGTCGCCGAGTTCGTTACCCGGGAACTCAGCGCTGAACAAATCGGGAAATCCTCACCGAAGTGGTAGCGCGAAAATGAGTCCGGAGGCTCTAATCGCCATTATAGTTGGCGACGCTTTGGTTCTCGTGCTGGTTTCGCTGCTACTGTACTGCTACTTCTGGCGGAATTTCAGCGCCAAAATGCGGCAGGGCAAGGGGGGCTCGAAGCTTCTAGAAACTGAGAAGATCGTGTACTCGTCGAGCCCCTACTCCGCCGCCCAACCAGTGTTCGAGCGGGGTCGGATGGTGTTCTTCGAAGCAGTAAAGCGTTTCGAGCTCGAGGACTTGCTCAGGGCCTCGGCGGAGATGCTGGGGAAAGGCGGGTTCGGGACGGCGTACAAGGCGGTTCTCGACGATGGCAACGTGGTGGCGGTTAAGAGGCTCAAGGATGCTCAGATTGGCGGGAAGACTCAGTTCGAGCAGCACATGGCGGTGCTGGGGCGGCTCAGCCATCCCAACATTGTGAGCTTGAGGGCTTATTACTTCGCCAGGGAGGAGAAATTGTTGGTATACGATTACATGCCCAATGGCAGCCTGTTCTGGGTTCTCCACGGAAACCGTGGACCCGGTCGGACTCCGCTGGACTGGACAACGAGGCTGAAAATCGCAGCCGGAGCCGCTCGAGGCTTGGCCTGCATTCACGACTCATGCGGGCCGCTTAAGCTCACCCACGGTAACATCAAGTCCACCAACATCCTCTTAGACAAGACCGGTAACGCCCGCGTCTCCGACTTCGGACTCTCCGTCTTCGTGCCTCCTCCGCCCGCCACGTCGTCCGCTCCGCGATCCTGCGGCTACCGCGCTCCCGAGACGTTGGACGGTCGGAAGTTGACGCAGAAATCAGACGTGTACGCTTTCGGTGTTCTCCTGCTGGAGCTGCTCACGGGGAAGTGTCCCTCCGTGGTGGATAATGGCGGGTCCGGGGGAGGATACGGTGGGCTTGTGGACCTGCCCAGGTGGGTCCAGTCTGTGGTCAGGGAAGAATGGACGGTGGAGGTGTTTGACTTGGAGCTGATGAGGTACAAGGATATTGAGGAGGAGATGGTGGGGCTTTTGCAGATTGCAATGGCTTGTACGGCCGCTTCGCCTGATCAACGTCCCAGGATGAGCCAGGTGGTGAAAATGATTGACGAGATTCGGGGCCTGTCTGGTTCGCCGAGTCACGAGACCGGCTTTGAATCCATGTCCGAGTCGTCGGCCTTGTCGGAGGACACTTGCGGAGCAAGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 Pkinase Pkinase_Tyr

Protein Analysis

630

Amino Acids

67.96

Weight (kDa)

8.92

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	25 - 63	1.8e-09	Leucine rich repeat N-terminal domain
Pkinase	PF00069	320 - 525	1.7e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	321 - 594	7.1e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007709)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68400
fragaria_vesca	FvH4_4g26930 FvH4_4g26970
malus_domestica	MD13G1036800.v1.1 MD13G1038100.v1.1 MD13G1038400.v1.1 MD13G1260200.v1.1
prunus_persica	Prupe.1G314900_v2.0.a1
pyrus_communis	pycom13g03310 pycom13g03320 pycom16g03410
rosa_chinensis	RchiOBHm_Chr4g0434721
rosa_laevigata	RLG00000006655
rosa_multiflora	Rmu_sc0004538.1_g000001 Rmu_sc0008439.1_g000001 Rmu_sc0017904.1_g000007
rosa_roxburghii	Rroxscaffold_5G00375930
rosa_rugosa	Rorug04G0277800
rosa_samantha	Rh4AG334200 Rh4BG342600 Rh4CG357000 Rh4DG336300
rosa_wichuraiana	Rw4G029010 Rw4G029150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1614
AccB7I	CCANNNNNTGG	1 cut(s)	1627
AccBSI	CCGCTC	3 cut(s)	892, 1277, 1436
AccI	GTMKAC	1 cut(s)	1167
AccII	CGCG	6 cut(s)	234, 257, 689, 1380, 1441, 1458
AccIII	TCCGGA	2 cut(s)	313, 700
AclWI	GGATC	2 cut(s)	568, 1437
AcoI	YGGCCR	3 cut(s)	12, 21, 1734
AcsI	RAATTY	1 cut(s)	784
AcvI	CACGTG	1 cut(s)	138
AcyI	GRCGYC	1 cut(s)	177
AdeI	CACNNNGTG	1 cut(s)	138
AfaI	GTAC	7 cut(s)	535, 767, 851, 995, 1508, 1679, 1732
AfeI	AGCGCT	1 cut(s)	651
AfiI	CCNNNNNNNGG	5 cut(s)	313, 499, 801, 1198, 1627
AflII	CTTAAG	1 cut(s)	1316
AflIII	ACRYGT	1 cut(s)	1503
AgeI	ACCGGT	1 cut(s)	1367
AgsI	TTSAA	3 cut(s)	103, 475, 1835
AhdI	GACNNNNNGTC	1 cut(s)	1400
AjiI	CACGTC	3 cut(s)	64, 1428, 1504
AjnI	CCWGG	6 cut(s)	167, 556, 1145, 1610, 1757, 1767
AleI	CACNNNNGTG	1 cut(s)	678
AloI	GAACNNNNNNTCC	4 cut(s)	134, 166, 497, 529
Alw21I	GWGCWC	2 cut(s)	167, 936
Alw26I	GTCTC	7 cut(s)	70, 184, 205, 585, 1387, 1460, 1817
Alw44I	GTGCAC	1 cut(s)	163
AlwI	GGATC	2 cut(s)	568, 1437
Ama87I	CYCGRG	6 cut(s)	215, 497, 638, 935, 1278, 1463
Aor13HI	TCCGGA	2 cut(s)	313, 700
Aor51HI	AGCGCT	1 cut(s)	651
ApaLI	GTGCAC	1 cut(s)	163
ApeKI	GCWGC	9 cut(s)	5, 53, 525, 596, 757, 1078, 1188, 1265, 1534
ApoI	RAATTY	1 cut(s)	784
AsiGI	ACCGGT	1 cut(s)	1367
Asp700I	GAANNNNTTC	1 cut(s)	509
AspLEI	GCGC	5 cut(s)	259, 652, 689, 794, 1460
AsuC2I	CCSGG	5 cut(s)	553, 639, 640, 1224, 1579
AsuHPI	GGTGA	6 cut(s)	124, 244, 322, 665, 1315, 1786
AsuII	TTCGAA	2 cut(s)	71, 912
AvaI	CYCGRG	6 cut(s)	215, 497, 638, 935, 1278, 1463
AvaII	GGWCC	6 cut(s)	171, 316, 1220, 1575, 1603, 1618
BaeGI	GKGCMC	1 cut(s)	167
BalI	TGGCCA	1 cut(s)	23
BanII	GRGCYC	3 cut(s)	821, 863, 936
BarI	GAAGNNNNNNTAC	6 cut(s)	758, 790, 833, 865, 1723, 1755
BauI	CACGAG	3 cut(s)	37, 743, 1820
BbrPI	CACGTG	1 cut(s)	138
BbsI	GAAGAC	2 cut(s)	1070, 1396
Bbv12I	GWGCWC	2 cut(s)	167, 936
BbvI	GCAGC	9 cut(s)	17, 40, 512, 583, 744, 1090, 1200, 1277, 1521
BccI	CCATC	4 cut(s)	895, 1007, 1116, 1693
BceAI	ACGGC	4 cut(s)	2, 27, 1005, 1749
BciT130I	CCWGG	6 cut(s)	169, 558, 1147, 1612, 1759, 1769
BciVI	GTATCC	1 cut(s)	1580
BclI	TGATCA	1 cut(s)	1747
BcnI	CCSGG	5 cut(s)	553, 639, 640, 1224, 1579
BcoDI	GTCTC	7 cut(s)	70, 184, 205, 585, 1387, 1460, 1817
BfaI	CTAG	1 cut(s)	830
BfoI	RGCGCY	2 cut(s)	653, 795
BfrI	CTTAAG	1 cut(s)	1316
BfuAI	ACCTGC	1 cut(s)	1614
BfuI	GTATCC	1 cut(s)	1580
BglI	GCCNNNNNGGC	2 cut(s)	20, 303
BlpI	GCTNAGC	1 cut(s)	1103
Bme18I	GGWCC	6 cut(s)	171, 316, 1220, 1575, 1603, 1618
BmeRI	GACNNNNNGTC	1 cut(s)	1400
BmeT110I	CYCGRG	6 cut(s)	215, 497, 638, 935, 1278, 1463
BmgBI	CACGTC	3 cut(s)	64, 1428, 1504
BmiI	GGNNCC	7 cut(s)	307, 571, 1222, 1273, 1576, 1619, 1799
BmsI	GCATC	3 cut(s)	128, 954, 1036
BoxI	GACNNNNGTC	1 cut(s)	176
BpiI	GAAGAC	2 cut(s)	1070, 1396
BpmI	CTGGAG	1 cut(s)	1550
Bpu10I	CCTNAGC	1 cut(s)	947
Bpu1102I	GCTNAGC	1 cut(s)	1103
Bpu14I	TTCGAA	2 cut(s)	71, 912
BpuEI	CTTGAG	3 cut(s)	269, 1025, 1147
BpuMI	CCSGG	5 cut(s)	553, 639, 640, 1224, 1579
BsaAI	YACGTR	1 cut(s)	138
BsaHI	GRCGYC	1 cut(s)	177
BsaI	GGTCTC	1 cut(s)	1817
BsaWI	WCCGGW	4 cut(s)	313, 515, 700, 1367
Bsc4I	CCNNNNNNNGG	5 cut(s)	313, 499, 801, 1198, 1627
Bse118I	RCCGGY	3 cut(s)	173, 1367, 1826
Bse1I	ACTGG	3 cut(s)	881, 1247, 1621
Bse3DI	GCAATG	2 cut(s)	573, 1728
BseAI	TCCGGA	2 cut(s)	313, 700
BseBI	CCWGG	6 cut(s)	169, 558, 1147, 1612, 1759, 1769
BseGI	GGATG	6 cut(s)	119, 906, 1051, 1108, 1350, 1767
BseLI	CCNNNNNNNGG	5 cut(s)	313, 499, 801, 1198, 1627
BseMI	GCAATG	2 cut(s)	573, 1728
BseMII	CTCAG	8 cut(s)	269, 278, 660, 828, 961, 1064, 1082, 1117
BseNI	ACTGG	3 cut(s)	881, 1247, 1621
BseRI	GAGGAG	5 cut(s)	23, 1166, 1404, 1706, 1709
BseSI	GKGCMC	1 cut(s)	167
BseX3I	CGGCCG	2 cut(s)	12, 1734
BseXI	GCAGC	9 cut(s)	17, 40, 512, 583, 744, 1090, 1200, 1277, 1521
BseYI	CCCAGC	2 cut(s)	967, 1093
BsgI	GTGCAG	1 cut(s)	169
Bsh1236I	CGCG	6 cut(s)	234, 257, 689, 1380, 1441, 1458
Bsh1285I	CGRYCG	4 cut(s)	15, 1228, 1480, 1737
BshTI	ACCGGT	1 cut(s)	1367
BsiEI	CGRYCG	4 cut(s)	15, 1228, 1480, 1737
BsiHKAI	GWGCWC	2 cut(s)	167, 936
BsiHKCI	CYCGRG	6 cut(s)	215, 497, 638, 935, 1278, 1463
BslFI	GGGAC	3 cut(s)	1000, 1536, 1740
BslI	CCNNNNNNNGG	5 cut(s)	313, 499, 801, 1198, 1627
BsmAI	GTCTC	7 cut(s)	70, 184, 205, 585, 1387, 1460, 1817
BsmBI	CGTCTC	5 cut(s)	70, 184, 585, 1387, 1460
BsmFI	GGGAC	3 cut(s)	1000, 1536, 1740
BsmI	GAATGC	1 cut(s)	1293
Bso31I	GGTCTC	1 cut(s)	1817
BsoBI	CYCGRG	6 cut(s)	215, 497, 638, 935, 1278, 1463
Bsp119I	TTCGAA	2 cut(s)	71, 912
Bsp1286I	GDGCHC	4 cut(s)	167, 821, 863, 936
Bsp13I	TCCGGA	2 cut(s)	313, 700
Bsp143I	GATC	5 cut(s)	421, 560, 843, 1442, 1747
Bsp1720I	GCTNAGC	1 cut(s)	1103
BspCNI	CTCAG	8 cut(s)	270, 277, 659, 829, 960, 1063, 1081, 1116
BspEI	TCCGGA	2 cut(s)	313, 700
BspFNI	CGCG	6 cut(s)	234, 257, 689, 1380, 1441, 1458
BspLI	GGNNCC	7 cut(s)	307, 571, 1222, 1273, 1576, 1619, 1799
BspMI	ACCTGC	1 cut(s)	1614
BspPI	GGATC	2 cut(s)	568, 1437
BspT104I	TTCGAA	2 cut(s)	71, 912
BspTI	CTTAAG	1 cut(s)	1316
BspTNI	GGTCTC	1 cut(s)	1817
BsrBI	CCGCTC	3 cut(s)	892, 1277, 1436
BsrDI	GCAATG	2 cut(s)	573, 1728
BsrFI	RCCGGY	3 cut(s)	173, 1367, 1826
BsrI	ACTGG	3 cut(s)	881, 1247, 1621
BssAI	RCCGGY	3 cut(s)	173, 1367, 1826
BssMI	GATC	5 cut(s)	421, 560, 843, 1442, 1747
BssNAI	GTATAC	1 cut(s)	1168
BssNI	GRCGYC	1 cut(s)	177
BssSI	CACGAG	3 cut(s)	37, 743, 1820
Bst1107I	GTATAC	1 cut(s)	1168
Bst2BI	CACGAG	3 cut(s)	37, 743, 1820
Bst2UI	CCWGG	6 cut(s)	169, 558, 1147, 1612, 1759, 1769
Bst4CI	ACNGT	9 cut(s)	463, 509, 610, 765, 1217, 1331, 1478, 1592, 1648
Bst6I	CTCTTC	3 cut(s)	33, 73, 407
BstACI	GRCGYC	1 cut(s)	177
BstAFI	CTTAAG	1 cut(s)	1316
BstBAI	YACGTR	1 cut(s)	138
BstBI	TTCGAA	2 cut(s)	71, 912
BstC8I	GCNNGC	5 cut(s)	594, 1291, 1310, 1378, 1422
BstDEI	CTNAG	9 cut(s)	264, 278, 646, 837, 947, 1050, 1068, 1103, 1357
BstDSI	CCRYGG	7 cut(s)	9, 18, 232, 1207, 1216, 1327, 1557
BstF5I	GGATG	6 cut(s)	119, 906, 1051, 1108, 1350, 1767
BstFNI	CGCG	6 cut(s)	234, 257, 689, 1380, 1441, 1458
BstH2I	RGCGCY	2 cut(s)	653, 795
BstHHI	GCGC	5 cut(s)	259, 652, 689, 794, 1460
BstKTI	GATC	5 cut(s)	424, 563, 846, 1445, 1750
BstMAI	GTCTC	7 cut(s)	70, 184, 205, 585, 1387, 1460, 1817
BstMBI	GATC	5 cut(s)	421, 560, 843, 1442, 1747
BstMCI	CGRYCG	4 cut(s)	15, 1228, 1480, 1737
BstNI	CCWGG	6 cut(s)	169, 558, 1147, 1612, 1759, 1769
BstNSI	RCATGY	1 cut(s)	1180
BstPAI	GACNNNNGTC	1 cut(s)	176
BstSLI	GKGCMC	1 cut(s)	167
BstUI	CGCG	6 cut(s)	234, 257, 689, 1380, 1441, 1458
BstV1I	GCAGC	9 cut(s)	17, 40, 512, 583, 744, 1090, 1200, 1277, 1521
BstV2I	GAAGAC	2 cut(s)	1070, 1396
BstX2I	RGATCY	1 cut(s)	560
BstYI	RGATCY	1 cut(s)	560
BstZ17I	GTATAC	1 cut(s)	1168
BstZI	CGGCCG	2 cut(s)	12, 1734
BsuI	GTATCC	1 cut(s)	1580
BtgI	CCRYGG	7 cut(s)	9, 18, 232, 1207, 1216, 1327, 1557
BtrI	CACGTC	3 cut(s)	64, 1428, 1504
BtsCI	GGATG	6 cut(s)	119, 906, 1051, 1108, 1350, 1767
BtsIMutI	CAGTG	1 cut(s)	888
BveI	ACCTGC	1 cut(s)	1614
Cac8I	GCNNGC	5 cut(s)	594, 1291, 1310, 1378, 1422
CfoI	GCGC	5 cut(s)	259, 652, 689, 794, 1460
Cfr10I	RCCGGY	3 cut(s)	173, 1367, 1826
Cfr42I	CCGCGG	1 cut(s)	235
Cfr9I	CCCGGG	1 cut(s)	638
CseI	GACGC	7 cut(s)	125, 166, 567, 606, 740, 1369, 1498
Csp6I	GTAC	7 cut(s)	534, 766, 850, 994, 1507, 1678, 1731
CspAI	ACCGGT	1 cut(s)	1367
CspCI	CAANNNNNGTGG	2 cut(s)	136, 171
CviAII	CATG	4 cut(s)	1084, 1177, 1305, 1840
CviQI	GTAC	7 cut(s)	534, 766, 850, 994, 1507, 1678, 1731
DdeI	CTNAG	9 cut(s)	264, 278, 646, 837, 947, 1050, 1068, 1103, 1357
DpnI	GATC	5 cut(s)	423, 562, 845, 1444, 1749
DpnII	GATC	5 cut(s)	421, 560, 843, 1442, 1747
DraIII	CACNNNGTG	1 cut(s)	138
DriI	GACNNNNNGTC	1 cut(s)	1400
EaeI	YGGCCR	3 cut(s)	12, 21, 1734
EagI	CGGCCG	2 cut(s)	12, 1734
Eam1104I	CTCTTC	3 cut(s)	33, 73, 407
Eam1105I	GACNNNNNGTC	1 cut(s)	1400
EarI	CTCTTC	3 cut(s)	33, 73, 407
EciI	GGCGGA	5 cut(s)	395, 796, 859, 974, 1407
Ecl136II	GAGCTC	1 cut(s)	934
EclXI	CGGCCG	2 cut(s)	12, 1734
Eco24I	GRGCYC	3 cut(s)	821, 863, 936
Eco31I	GGTCTC	1 cut(s)	1817
Eco47I	GGWCC	6 cut(s)	171, 316, 1220, 1575, 1603, 1618
Eco47III	AGCGCT	1 cut(s)	651
Eco52I	CGGCCG	2 cut(s)	12, 1734
Eco53kI	GAGCTC	1 cut(s)	934
Eco72I	CACGTG	1 cut(s)	138
Eco88I	CYCGRG	6 cut(s)	215, 497, 638, 935, 1278, 1463
EcoICRI	GAGCTC	1 cut(s)	934
EcoO109I	RGGNCCY	2 cut(s)	951, 1798
EcoRII	CCWGG	6 cut(s)	167, 556, 1145, 1610, 1757, 1767
EcoT38I	GRGCYC	3 cut(s)	821, 863, 936
Esp3I	CGTCTC	5 cut(s)	70, 184, 585, 1387, 1460
FaeI	CATG	4 cut(s)	1087, 1180, 1308, 1843
FaiI	YATR	6 cut(s)	722, 1085, 1168, 1178, 1306, 1841
FaqI	GGGAC	3 cut(s)	1000, 1536, 1740
FatI	CATG	4 cut(s)	1083, 1176, 1304, 1839
FauI	CCCGC	8 cut(s)	463, 885, 971, 1052, 1301, 1385, 1429, 1565
FbaI	TGATCA	1 cut(s)	1747
FblI	GTMKAC	1 cut(s)	1167
FokI	GGATG	6 cut(s)	106, 913, 1058, 1095, 1337, 1774
FriOI	GRGCYC	3 cut(s)	821, 863, 936
FspBI	CTAG	1 cut(s)	830
GlaI	GCGC	5 cut(s)	258, 651, 688, 793, 1459
GsaI	CCCAGC	2 cut(s)	971, 1097
GsuI	CTGGAG	1 cut(s)	1550
HaeII	RGCGCY	2 cut(s)	653, 795
HgaI	GACGC	7 cut(s)	125, 166, 567, 606, 740, 1369, 1498
HhaI	GCGC	5 cut(s)	259, 652, 689, 794, 1460
Hin1I	GRCGYC	1 cut(s)	177
Hin1II	CATG	4 cut(s)	1087, 1180, 1308, 1843
Hin6I	GCGC	5 cut(s)	257, 650, 687, 792, 1458
HinP1I	GCGC	5 cut(s)	257, 650, 687, 792, 1458
HincII	GTYRAC	3 cut(s)	157, 466, 1488
HindII	GTYRAC	3 cut(s)	157, 466, 1488
HindIII	AAGCTT	1 cut(s)	824
HphI	GGTGA	6 cut(s)	124, 244, 322, 665, 1315, 1786
Hpy99I	CGWCG	9 cut(s)	115, 614, 622, 625, 734, 859, 1013, 1432, 1855
HpyCH4III	ACNGT	9 cut(s)	463, 509, 610, 765, 1217, 1331, 1478, 1592, 1648
HpyCH4IV	ACGT	8 cut(s)	63, 110, 137, 1020, 1427, 1469, 1503, 1753
HpyCH4V	TGCA	6 cut(s)	165, 186, 528, 1293, 1714, 1721
HpyF3I	CTNAG	9 cut(s)	264, 278, 646, 837, 947, 1050, 1068, 1103, 1357
HpySE526I	ACGT	8 cut(s)	63, 110, 137, 1020, 1427, 1469, 1503, 1753
Hsp92I	GRCGYC	1 cut(s)	177
Hsp92II	CATG	4 cut(s)	1087, 1180, 1308, 1843
HspAI	GCGC	5 cut(s)	257, 650, 687, 792, 1458
Kpn2I	TCCGGA	2 cut(s)	313, 700
Ksp22I	TGATCA	1 cut(s)	1747
KspI	CCGCGG	1 cut(s)	235
Kzo9I	GATC	5 cut(s)	421, 560, 843, 1442, 1747
LmnI	GCTCC	8 cut(s)	273, 569, 1271, 1441, 1465, 1531, 1666, 1877
Lsp1109I	GCAGC	9 cut(s)	17, 40, 512, 583, 744, 1090, 1200, 1277, 1521
LweI	GCATC	3 cut(s)	128, 954, 1036
MaeI	CTAG	1 cut(s)	830
MaeII	ACGT	8 cut(s)	63, 110, 137, 1020, 1427, 1469, 1503, 1753
MaeIII	GTNAC	5 cut(s)	290, 633, 1331, 1370, 1817
MalI	GATC	5 cut(s)	423, 562, 845, 1444, 1749
MbiI	CCGCTC	3 cut(s)	892, 1277, 1436
MboI	GATC	5 cut(s)	421, 560, 843, 1442, 1747
MflI	RGATCY	1 cut(s)	560
MhlI	GDGCHC	4 cut(s)	167, 821, 863, 936
MlsI	TGGCCA	1 cut(s)	23
MluCI	AATT	2 cut(s)	784, 1157
MluNI	TGGCCA	1 cut(s)	23
MlyI	GAGTC	8 cut(s)	207, 706, 1060, 1225, 1295, 1389, 1825, 1856
MmeI	TCCRAC	9 cut(s)	93, 147, 348, 878, 1208, 1410, 1452, 1460, 1842
Mox20I	TGGCCA	1 cut(s)	23
MroI	TCCGGA	2 cut(s)	313, 700
MroXI	GAANNNNTTC	1 cut(s)	509
MscI	TGGCCA	1 cut(s)	23
MseI	TTAA	2 cut(s)	1032, 1317
MslI	CAYNNNNRTG	2 cut(s)	678, 1088
Msp20I	TGGCCA	1 cut(s)	23
MspA1I	CMGCKG	2 cut(s)	234, 1237
MspCI	CTTAAG	1 cut(s)	1316
Mva1269I	GAATGC	1 cut(s)	1293
MvaI	CCWGG	6 cut(s)	169, 558, 1147, 1612, 1759, 1769
MvnI	CGCG	6 cut(s)	234, 257, 689, 1380, 1441, 1458
NciI	CCSGG	5 cut(s)	553, 639, 640, 1224, 1579
NdeII	GATC	5 cut(s)	421, 560, 843, 1442, 1747
NlaIII	CATG	4 cut(s)	1087, 1180, 1308, 1843
NlaIV	GGNNCC	7 cut(s)	307, 571, 1222, 1273, 1576, 1619, 1799
NmeAIII	GCCGAG	3 cut(s)	651, 935, 1839
NmuCI	GTSAC	1 cut(s)	1817
NspI	RCATGY	1 cut(s)	1180
NspV	TTCGAA	2 cut(s)	71, 912
OliI	CACNNNNGTG	1 cut(s)	678
PaeR7I	CTCGAG	4 cut(s)	215, 497, 935, 1278
PcsI	WCGNNNNNNNCGW	4 cut(s)	222, 629, 1017, 1398
PctI	GAATGC	1 cut(s)	1293
PdmI	GAANNNNTTC	1 cut(s)	509
PfeI	GAWTC	5 cut(s)	73, 451, 475, 1792, 1835
PflFI	GACNNNGTC	1 cut(s)	1224
PflMI	CCANNNNNTGG	1 cut(s)	1627
PinAI	ACCGGT	1 cut(s)	1367
PleI	GAGTC	8 cut(s)	206, 705, 1060, 1225, 1295, 1389, 1824, 1855
PmaCI	CACGTG	1 cut(s)	138
PmlI	CACGTG	1 cut(s)	138
PpsI	GAGTC	8 cut(s)	206, 705, 1060, 1225, 1295, 1389, 1824, 1855
Ppu21I	YACGTR	1 cut(s)	138
PshAI	GACNNNNGTC	1 cut(s)	176
Psp124BI	GAGCTC	1 cut(s)	936
Psp6I	CCWGG	6 cut(s)	167, 556, 1145, 1610, 1757, 1767
PspCI	CACGTG	1 cut(s)	138
PspFI	CCCAGC	2 cut(s)	967, 1093
PspGI	CCWGG	6 cut(s)	167, 556, 1145, 1610, 1757, 1767
PspN4I	GGNNCC	7 cut(s)	307, 571, 1222, 1273, 1576, 1619, 1799
PspXI	VCTCGAGB	3 cut(s)	497, 935, 1278
PsuI	RGATCY	1 cut(s)	560
PsyI	GACNNNGTC	1 cut(s)	1224
RsaI	GTAC	7 cut(s)	535, 767, 851, 995, 1508, 1679, 1732
RsaNI	GTAC	7 cut(s)	534, 766, 850, 994, 1507, 1678, 1731
RseI	CAYNNNNRTG	2 cut(s)	678, 1088
SacI	GAGCTC	1 cut(s)	936
SacII	CCGCGG	1 cut(s)	235
SaqAI	TTAA	2 cut(s)	1032, 1317
Sau3AI	GATC	5 cut(s)	421, 560, 843, 1442, 1747
SchI	GAGTC	8 cut(s)	207, 706, 1060, 1225, 1295, 1389, 1825, 1856
SduI	GDGCHC	4 cut(s)	167, 821, 863, 936
SfaNI	GCATC	3 cut(s)	128, 954, 1036
SfiI	GGCCNNNNNGGCC	1 cut(s)	20
Sfr274I	CTCGAG	4 cut(s)	215, 497, 935, 1278
Sfr303I	CCGCGG	1 cut(s)	235
SfuI	TTCGAA	2 cut(s)	71, 912
SgrBI	CCGCGG	1 cut(s)	235
SinI	GGWCC	6 cut(s)	171, 316, 1220, 1575, 1603, 1618
SlaI	CTCGAG	4 cut(s)	215, 497, 935, 1278
SmaI	CCCGGG	1 cut(s)	640
SmiMI	CAYNNNNRTG	2 cut(s)	678, 1088
SmlI	CTYRAG	8 cut(s)	215, 284, 497, 935, 1040, 1126, 1278, 1316
SmoI	CTYRAG	8 cut(s)	215, 284, 497, 935, 1040, 1126, 1278, 1316
Sse9I	AATT	2 cut(s)	784, 1157
SspMI	CTAG	1 cut(s)	830
SstI	GAGCTC	1 cut(s)	936
TaaI	ACNGT	9 cut(s)	463, 509, 610, 765, 1217, 1331, 1478, 1592, 1648
TaiI	ACGT	8 cut(s)	66, 113, 140, 1023, 1430, 1472, 1506, 1756
TasI	AATT	2 cut(s)	784, 1157
TatI	WGTACW	2 cut(s)	765, 849
TauI	GCSGC	9 cut(s)	17, 237, 805, 875, 1102, 1277, 1315, 1452, 1739
TfiI	GAWTC	5 cut(s)	73, 451, 475, 1792, 1835
Tru1I	TTAA	2 cut(s)	1032, 1317
Tru9I	TTAA	2 cut(s)	1032, 1317
TscAI	CASTG	1 cut(s)	888
TseFI	GTSAC	1 cut(s)	1817
TseI	GCWGC	9 cut(s)	5, 53, 525, 596, 757, 1078, 1188, 1265, 1534
Tsp45I	GTSAC	1 cut(s)	1817
TspGWI	ACGGA	6 cut(s)	142, 379, 582, 1224, 1390, 1546
TspMI	CCCGGG	1 cut(s)	638
TspRI	CASTG	1 cut(s)	888
Tth111I	GACNNNGTC	1 cut(s)	1224
Van91I	CCANNNNNTGG	1 cut(s)	1627
Vha464I	CTTAAG	1 cut(s)	1316
VneI	GTGCAC	1 cut(s)	163
VpaK11BI	GGWCC	6 cut(s)	171, 316, 1220, 1575, 1603, 1618
XapI	RAATTY	1 cut(s)	784
XbaI	TCTAGA	1 cut(s)	829
XceI	RCATGY	1 cut(s)	1180
XcmI	CCANNNNNNNNNTGG	2 cut(s)	16, 1214
XhoI	CTCGAG	4 cut(s)	215, 497, 935, 1278
XmaI	CCCGGG	1 cut(s)	638
XmiI	GTMKAC	1 cut(s)	1167
XmnI	GAANNNNTTC	1 cut(s)	509
XspI	CTAG	1 cut(s)	830

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.