Rmu_sc0017904.1_g000007

Leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017904.1
Physical Location & Seq
Reverse (-)
17417 .. 19674
2258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017904.1_g000007.1.cds

Sequence Viewer

Length: 1083 bp
atgcggcagggcaagagcagctcgaagcttctggagacagagaagatagtctactcgtcgagcccatactcggcccagcccactttcgagaggggacagatggtgtttttcgaaggcgtgaagcgtttcgagctggaggacttgctgagagcctcggcggagatgttggggaaaggtgggttcgggacggcgtacaaggcggttttggacgacggcaatgttgtggcggtgaagaggctcaaggatgctcaaattggtgggaagaatcagtttgagcagcacatggcggtgctgggcaagcttagccatctcaacattgtgagcttgagggcttattatttcgctagggaggagaagttgctggtctacgattacatgccaaatggaagcttgttttggcttcttcatggtaacagaggacctggaagaaccccactggactggaccaccagactgaaaattgcagccggagctgcacgagggctaggtttcattcacagctcctgcgctccccttaagctcacccatggcaacatcaaatccaccaacattctcttggacaagaccggcaatgctcgtgtctccgacttcggactttcggccttttcgccttccacctccgccgcgtcggctccgcggtcgtgcgggtaccgcgctcccgagttgctggagggtcggaaagtaacgcagaagtcggacgtgtatgctttcggtgttcttttgctggagatattgaccgggaaatgcccgtcagctgtcgtggatggggggtccggcggcggatacggtgggttggtggacctgccgaggtgggtccagtctgtggtgagagaggagtggactgccgaggtgttcgacttggagttgatgaggtacaaggacatagaggaggagatggtggggcttttgcaggttgcaatggcttgcacaacggcagtgcctgatcaacggccgaggatgagccaggtggtgaagatgatcgacgagattcgcggcgtggcggggtcgccgcctcatgaggcgtttgattccatgacggagtcgccggctttgtccgaggacacttgcggagcaagtcagtga

Protein Analysis

360

Amino Acids

39.2

Weight (kDa)

7.01

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 810, 901
Acc65I GGTACC 1 cut(s) 648
AccB1I GGYRCC 1 cut(s) 648
AccB7I CCANNNNNTGG 1 cut(s) 823
AccI GTMKAC 2 cut(s) 51, 366
AccII CGCG 4 cut(s) 626, 637, 654, 993
AcoI YGGCCR 1 cut(s) 950
AfaI GTAC 3 cut(s) 194, 650, 875
AfiI CCNNNNNNNGG 2 cut(s) 70, 823
AflII CTTAAG 1 cut(s) 515
AflIII ACRYGT 1 cut(s) 699
AjiI CACGTC 1 cut(s) 700
AjnI CCWGG 2 cut(s) 421, 963
AjuI GAANNNNNNNTTGG 2 cut(s) 379, 411
Alw26I GTCTC 2 cut(s) 29, 586
AlwNI CAGNNNCTG 2 cut(s) 504, 941
Ama87I CYCGRG 1 cut(s) 659
AoxI GGCC 3 cut(s) 72, 600, 950
ApeKI GCWGC 4 cut(s) 18, 277, 464, 473
Asp700I GAANNNNTTC 1 cut(s) 125
Asp718I GGTACC 1 cut(s) 648
AspLEI GCGC 2 cut(s) 509, 656
AspS9I GGNCC 6 cut(s) 73, 419, 444, 771, 799, 814
AsuC2I CCSGG 1 cut(s) 739
AsuHPI GGTGA 4 cut(s) 241, 514, 838, 982
AsuII TTCGAA 1 cut(s) 111
AvaI CYCGRG 1 cut(s) 659
AvaII GGWCC 5 cut(s) 419, 444, 771, 799, 814
BanI GGYRCC 1 cut(s) 648
BanII GRGCYC 1 cut(s) 65
BarI GAAGNNNNNNTAC 2 cut(s) 35, 67
BauI CACGAG 2 cut(s) 477, 576
BbvI GCAGC 4 cut(s) 30, 289, 460, 476
BccI CCATC 4 cut(s) 94, 315, 758, 889
BceAI ACGGC 4 cut(s) 204, 229, 948, 965
BciT130I CCWGG 2 cut(s) 423, 965
BciVI GTATCC 1 cut(s) 776
BclI TGATCA 1 cut(s) 943
BcnI CCSGG 1 cut(s) 739
BcoDI GTCTC 2 cut(s) 29, 586
BfaI CTAG 2 cut(s) 345, 485
BfrI CTTAAG 1 cut(s) 515
BfuAI ACCTGC 2 cut(s) 810, 901
BfuI GTATCC 1 cut(s) 776
BglI GCCNNNNNGGC 1 cut(s) 629
BisI GCNGC 9 cut(s) 5, 19, 278, 465, 474, 624, 778, 994, 1010
BlpI GCTNAGC 1 cut(s) 302
BlsI GCNGC 9 cut(s) 6, 20, 279, 466, 475, 625, 779, 995, 1011
Bme1390I CCNGG 3 cut(s) 423, 739, 965
Bme18I GGWCC 5 cut(s) 419, 444, 771, 799, 814
BmeT110I CYCGRG 1 cut(s) 659
BmgBI CACGTC 1 cut(s) 700
BmgT120I GGNCC 6 cut(s) 73, 419, 444, 771, 799, 814
BmiI GGNNCC 4 cut(s) 633, 650, 772, 815
BmrFI CCNGG 3 cut(s) 423, 739, 965
BmsI GCATC 1 cut(s) 235
BpmI CTGGAG 4 cut(s) 53, 155, 689, 746
Bpu1102I GCTNAGC 1 cut(s) 302
Bpu14I TTCGAA 1 cut(s) 111
BpuEI CTTGAG 2 cut(s) 224, 346
BpuMI CCSGG 1 cut(s) 739
BsaJI CCNNGG 7 cut(s) 153, 526, 635, 806, 846, 953, 1056
BsaXI ACNNNNNCTCC 2 cut(s) 341, 371
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 823
Bse118I RCCGGY 2 cut(s) 566, 1045
Bse1I ACTGG 3 cut(s) 441, 446, 817
Bse3DI GCAATG 3 cut(s) 223, 577, 924
BseBI CCWGG 2 cut(s) 423, 965
BseDI CCNNGG 7 cut(s) 153, 526, 635, 806, 846, 953, 1056
BseGI GGATG 3 cut(s) 250, 769, 963
BseLI CCNNNNNNNGG 2 cut(s) 70, 823
BseMI GCAATG 3 cut(s) 223, 577, 924
BseMII CTCAG 1 cut(s) 137
BseNI ACTGG 3 cut(s) 441, 446, 817
BseRI GAGGAG 4 cut(s) 365, 848, 902, 905
BseX3I CGGCCG 1 cut(s) 950
BseXI GCAGC 4 cut(s) 30, 289, 460, 476
BseYI CCCAGC 2 cut(s) 75, 292
BsgI GTGCAG 1 cut(s) 459
Bsh1236I CGCG 4 cut(s) 626, 637, 654, 993
Bsh1285I CGRYCG 2 cut(s) 641, 953
BshFI GGCC 3 cut(s) 74, 602, 952
BshNI GGYRCC 1 cut(s) 648
BsiEI CGRYCG 2 cut(s) 641, 953
BsiHKCI CYCGRG 1 cut(s) 659
BsiSI CCGG 5 cut(s) 468, 567, 738, 774, 1046
BslFI GGGAC 2 cut(s) 108, 199
BslI CCNNNNNNNGG 2 cut(s) 70, 823
BsmAI GTCTC 2 cut(s) 29, 586
BsmFI GGGAC 2 cut(s) 108, 199
BsnI GGCC 3 cut(s) 74, 602, 952
BsoBI CYCGRG 1 cut(s) 659
Bsp119I TTCGAA 1 cut(s) 111
Bsp1286I GDGCHC 1 cut(s) 65
Bsp143I GATC 2 cut(s) 943, 978
Bsp1720I GCTNAGC 1 cut(s) 302
Bsp19I CCATGG 1 cut(s) 526
BspANI GGCC 3 cut(s) 74, 602, 952
BspCNI CTCAG 1 cut(s) 138
BspFNI CGCG 4 cut(s) 626, 637, 654, 993
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 4 cut(s) 633, 650, 772, 815
BspMI ACCTGC 2 cut(s) 810, 901
BspT104I TTCGAA 1 cut(s) 111
BspT107I GGYRCC 1 cut(s) 648
BspTI CTTAAG 1 cut(s) 515
BsrDI GCAATG 3 cut(s) 223, 577, 924
BsrFI RCCGGY 2 cut(s) 566, 1045
BsrI ACTGG 3 cut(s) 441, 446, 817
BssAI RCCGGY 2 cut(s) 566, 1045
BssECI CCNNGG 7 cut(s) 153, 526, 635, 806, 846, 953, 1056
BssMI GATC 2 cut(s) 943, 978
BssSI CACGAG 2 cut(s) 477, 576
BssT1I CCWWGG 1 cut(s) 526
Bst2BI CACGAG 2 cut(s) 477, 576
Bst2UI CCWGG 2 cut(s) 423, 965
Bst4CI ACNGT 1 cut(s) 788
Bst6I CTCTTC 1 cut(s) 227
BstAFI CTTAAG 1 cut(s) 515
BstBI TTCGAA 1 cut(s) 111
BstC8I GCNNGC 3 cut(s) 299, 925, 1047
BstDEI CTNAG 2 cut(s) 146, 302
BstDSI CCRYGG 2 cut(s) 526, 635
BstF5I GGATG 3 cut(s) 250, 769, 963
BstFNI CGCG 4 cut(s) 626, 637, 654, 993
BstHHI GCGC 2 cut(s) 509, 656
BstKTI GATC 2 cut(s) 946, 981
BstMAI GTCTC 2 cut(s) 29, 586
BstMBI GATC 2 cut(s) 943, 978
BstMCI CGRYCG 2 cut(s) 641, 953
BstMWI GCNNNNNNNGC 9 cut(s) 18, 130, 197, 298, 303, 470, 473, 629, 651
BstNI CCWGG 2 cut(s) 423, 965
BstNSI RCATGY 1 cut(s) 379
BstSCI CCNGG 3 cut(s) 421, 737, 963
BstUI CGCG 4 cut(s) 626, 637, 654, 993
BstV1I GCAGC 4 cut(s) 30, 289, 460, 476
BstXI CCANNNNNNTGG 1 cut(s) 441
BstZI CGGCCG 1 cut(s) 950
BsuI GTATCC 1 cut(s) 776
BsuRI GGCC 3 cut(s) 74, 602, 952
BtgI CCRYGG 2 cut(s) 526, 635
BtrI CACGTC 1 cut(s) 700
BtsCI GGATG 3 cut(s) 250, 769, 963
BtsI GCAGTG 1 cut(s) 942
BtsIMutI CAGTG 2 cut(s) 434, 942
BveI ACCTGC 2 cut(s) 810, 901
Cac8I GCNNGC 3 cut(s) 299, 925, 1047
CaiI CAGNNNCTG 2 cut(s) 504, 941
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 2 cut(s) 509, 656
Cfr10I RCCGGY 2 cut(s) 566, 1045
Cfr13I GGNCC 6 cut(s) 73, 419, 444, 771, 799, 814
Cfr42I CCGCGG 1 cut(s) 638
CseI GACGC 1 cut(s) 615
Csp6I GTAC 3 cut(s) 193, 649, 874
CviAII CATG 6 cut(s) 283, 376, 407, 527, 1016, 1033
CviQI GTAC 3 cut(s) 193, 649, 874
DdeI CTNAG 2 cut(s) 146, 302
DpnI GATC 2 cut(s) 945, 980
DpnII GATC 2 cut(s) 943, 978
EaeI YGGCCR 1 cut(s) 950
EagI CGGCCG 1 cut(s) 950
Eam1104I CTCTTC 1 cut(s) 227
EarI CTCTTC 1 cut(s) 227
EciI GGCGGA 3 cut(s) 173, 610, 795
EclXI CGGCCG 1 cut(s) 950
Eco130I CCWWGG 1 cut(s) 526
Eco24I GRGCYC 1 cut(s) 65
Eco47I GGWCC 5 cut(s) 419, 444, 771, 799, 814
Eco52I CGGCCG 1 cut(s) 950
Eco88I CYCGRG 1 cut(s) 659
EcoO109I RGGNCCY 1 cut(s) 419
EcoRII CCWGG 2 cut(s) 421, 963
EcoT14I CCWWGG 1 cut(s) 526
EcoT38I GRGCYC 1 cut(s) 65
ErhI CCWWGG 1 cut(s) 526
FaeI CATG 6 cut(s) 286, 379, 410, 530, 1019, 1036
FaiI YATR 9 cut(s) 67, 284, 377, 408, 528, 705, 884, 1017, 1034
FaqI GGGAC 2 cut(s) 108, 199
FatI CATG 6 cut(s) 282, 375, 406, 526, 1015, 1032
FauI CCCGC 2 cut(s) 638, 994
FbaI TGATCA 1 cut(s) 943
FblI GTMKAC 2 cut(s) 51, 366
Fnu4HI GCNGC 9 cut(s) 5, 19, 278, 465, 474, 624, 778, 994, 1010
FokI GGATG 3 cut(s) 257, 776, 970
FriOI GRGCYC 1 cut(s) 65
Fsp4HI GCNGC 9 cut(s) 5, 19, 278, 465, 474, 624, 778, 994, 1010
FspBI CTAG 2 cut(s) 345, 485
GlaI GCGC 2 cut(s) 508, 655
GluI GCNGC 9 cut(s) 5, 19, 278, 465, 474, 624, 778, 994, 1010
GsaI CCCAGC 2 cut(s) 79, 296
GsuI CTGGAG 4 cut(s) 53, 155, 689, 746
HaeIII GGCC 3 cut(s) 74, 602, 952
HapII CCGG 5 cut(s) 468, 567, 738, 774, 1046
HgaI GACGC 1 cut(s) 615
HhaI GCGC 2 cut(s) 509, 656
Hin1II CATG 6 cut(s) 286, 379, 410, 530, 1019, 1036
Hin6I GCGC 2 cut(s) 507, 654
HinP1I GCGC 2 cut(s) 507, 654
HindIII AAGCTT 3 cut(s) 26, 299, 388
HinfI GANTC 4 cut(s) 265, 988, 1028, 1040
HpaII CCGG 5 cut(s) 468, 567, 738, 774, 1046
HphI GGTGA 4 cut(s) 241, 514, 838, 982
Hpy166II GTNNAC 4 cut(s) 52, 367, 799, 840
Hpy188I TCNGA 5 cut(s) 586, 593, 678, 697, 1057
Hpy188III TCNNGA 5 cut(s) 32, 88, 184, 659, 1016
Hpy8I GTNNAC 4 cut(s) 52, 367, 799, 840
Hpy99I CGWCG 4 cut(s) 61, 215, 631, 986
HpyAV CCTTC 2 cut(s) 107, 621
HpyCH4III ACNGT 1 cut(s) 788
HpyCH4IV ACGT 1 cut(s) 699
HpyCH4V TGCA 5 cut(s) 464, 476, 910, 917, 927
HpyF10VI GCNNNNNNNGC 9 cut(s) 18, 130, 197, 298, 303, 470, 473, 629, 651
HpyF3I CTNAG 2 cut(s) 146, 302
HpySE526I ACGT 1 cut(s) 699
Hsp92II CATG 6 cut(s) 286, 379, 410, 530, 1019, 1036
HspAI GCGC 2 cut(s) 507, 654
KpnI GGTACC 1 cut(s) 652
KroI GCCGGC 1 cut(s) 1045
KroNI GCCGGC 1 cut(s) 1047
Ksp22I TGATCA 1 cut(s) 943
KspI CCGCGG 1 cut(s) 638
Kzo9I GATC 2 cut(s) 943, 978
LmnI GCTCC 6 cut(s) 470, 506, 514, 637, 661, 1070
Lsp1109I GCAGC 4 cut(s) 30, 289, 460, 476
LweI GCATC 1 cut(s) 235
MaeI CTAG 2 cut(s) 345, 485
MaeII ACGT 1 cut(s) 699
MaeIII GTNAC 2 cut(s) 410, 682
MalI GATC 2 cut(s) 945, 980
MboI GATC 2 cut(s) 943, 978
MboII GAAGA 6 cut(s) 55, 244, 274, 395, 438, 985
MhlI GDGCHC 1 cut(s) 65
MluCI AATT 2 cut(s) 252, 459
MlyI GAGTC 1 cut(s) 1049
MmeI TCCRAC 3 cut(s) 609, 656, 675
MroNI GCCGGC 1 cut(s) 1045
MroXI GAANNNNTTC 1 cut(s) 125
MseI TTAA 1 cut(s) 516
MslI CAYNNNNRTG 1 cut(s) 287
MspA1I CMGCKG 2 cut(s) 637, 755
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 5 cut(s) 468, 567, 738, 774, 1046
MspR9I CCNGG 3 cut(s) 423, 739, 965
MvaI CCWGG 2 cut(s) 423, 965
MvnI CGCG 4 cut(s) 626, 637, 654, 993
MwoI GCNNNNNNNGC 9 cut(s) 18, 130, 197, 298, 303, 470, 473, 629, 651
NaeI GCCGGC 1 cut(s) 1047
NciI CCSGG 1 cut(s) 739
NcoI CCATGG 1 cut(s) 526
NdeII GATC 2 cut(s) 943, 978
NgoMIV GCCGGC 1 cut(s) 1045
NlaIII CATG 6 cut(s) 286, 379, 410, 530, 1019, 1036
NlaIV GGNNCC 4 cut(s) 633, 650, 772, 815
NmeAIII GCCGAG 5 cut(s) 50, 134, 831, 871, 978
NspI RCATGY 1 cut(s) 379
NspV TTCGAA 1 cut(s) 111
PagI TCATGA 1 cut(s) 1015
PdiI GCCGGC 1 cut(s) 1047
PdmI GAANNNNTTC 1 cut(s) 125
PfeI GAWTC 3 cut(s) 265, 988, 1028
PflFI GACNNNGTC 1 cut(s) 1039
PflMI CCANNNNNTGG 1 cut(s) 823
PkrI GCNGC 9 cut(s) 6, 20, 279, 466, 475, 625, 779, 995, 1011
PleI GAGTC 1 cut(s) 1048
PpsI GAGTC 1 cut(s) 1048
PpuMI RGGWCCY 1 cut(s) 419
Psp5II RGGWCCY 1 cut(s) 419
Psp6I CCWGG 2 cut(s) 421, 963
PspFI CCCAGC 2 cut(s) 75, 292
PspGI CCWGG 2 cut(s) 421, 963
PspN4I GGNNCC 4 cut(s) 633, 650, 772, 815
PspPI GGNCC 6 cut(s) 73, 419, 444, 771, 799, 814
PspPPI RGGWCCY 1 cut(s) 419
PstNI CAGNNNCTG 2 cut(s) 504, 941
PsyI GACNNNGTC 1 cut(s) 1039
PvuII CAGCTG 1 cut(s) 755
RsaI GTAC 3 cut(s) 194, 650, 875
RsaNI GTAC 3 cut(s) 193, 649, 874
RseI CAYNNNNRTG 1 cut(s) 287
SacII CCGCGG 1 cut(s) 638
SaqAI TTAA 1 cut(s) 516
SatI GCNGC 9 cut(s) 5, 19, 278, 465, 474, 624, 778, 994, 1010
Sau3AI GATC 2 cut(s) 943, 978
Sau96I GGNCC 6 cut(s) 73, 419, 444, 771, 799, 814
SchI GAGTC 1 cut(s) 1049
ScrFI CCNGG 3 cut(s) 423, 739, 965
SduI GDGCHC 1 cut(s) 65
SfaNI GCATC 1 cut(s) 235
Sfr303I CCGCGG 1 cut(s) 638
SfuI TTCGAA 1 cut(s) 111
SgrBI CCGCGG 1 cut(s) 638
SinI GGWCC 5 cut(s) 419, 444, 771, 799, 814
SmiMI CAYNNNNRTG 1 cut(s) 287
SmlI CTYRAG 3 cut(s) 239, 325, 515
SmoI CTYRAG 3 cut(s) 239, 325, 515
Sse9I AATT 2 cut(s) 252, 459
SspMI CTAG 2 cut(s) 345, 485
StyD4I CCNGG 3 cut(s) 421, 737, 963
StyI CCWWGG 1 cut(s) 526
TaaI ACNGT 1 cut(s) 788
TaiI ACGT 1 cut(s) 702
TaqI TCGA 7 cut(s) 23, 59, 87, 111, 129, 855, 981
TasI AATT 2 cut(s) 252, 459
TauI GCSGC 5 cut(s) 7, 626, 780, 996, 1012
TfiI GAWTC 3 cut(s) 265, 988, 1028
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TscAI CASTG 2 cut(s) 441, 942
TseI GCWGC 4 cut(s) 18, 277, 464, 473
TspDTI ATGAA 2 cut(s) 395, 481
TspGWI ACGGA 1 cut(s) 1052
TspRI CASTG 2 cut(s) 441, 942
Tth111I GACNNNGTC 1 cut(s) 1039
Van91I CCANNNNNTGG 1 cut(s) 823
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 5 cut(s) 419, 444, 771, 799, 814
XceI RCATGY 1 cut(s) 379
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XmiI GTMKAC 2 cut(s) 51, 366
XmnI GAANNNNTTC 1 cut(s) 125
XspI CTAG 2 cut(s) 345, 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.