Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0007978

Physical Location & Seq

Genomic Coordinates Reverse (-)

33498867 .. 33501923

Gene Structure 3057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g36690.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGTCAAACTTCTGTGATTTTCAAATCCACATTAATGGTCTGCAAACATTCTTTGTGAATGAGGAGATTTTATCAACATATTCAGGGAGGTTGAAGAAGATCATCAAGCAAGAAAGGAGAAGAGCTCAGATTACGTACCCGGGGATTGAAATCGATGACTTCCCTGGAGGCCCTGATGGGTTTGAGTTGATCTCAAGATTCTGTTACAGCAATGGAAGAATCACAATAACAGTTTCAAATGTGTCCCTCCTCCATTGTTGTGCAGTCTTTCTTGGTATGACTGAGAAAGTCTCAACCAACAATCTCTTGAAACAAACAGAAACCTTTCTTGAGGGACTGTTTGACTGGTCATGGAAAGAAATACTAGTCTGCCTCAAAAGCTGTGAGTCTTTCTTGAACTATGCAGATTCTTCAGGTCTTGTAGACAAACTCATTTGTGCAGTTATAGCAAAGATTGCTCAGAATTCCGACATAGGCAGCCTCATTGTTACTCCTTCTTCATCGTCTTCATCTCCGGAAACTACATCTGGGTTCAGAGTGTCTTCCTCATTTAGGAACACCCCTGAGTCACTCAAGCCAAGTTCATCAAGTAAAGCTTGGTGGTTTGATGATGTGTCCATTTTACCCCCAAAGATCATTGAGAAACTCATCCAAAGTTTGGGGGCTTATGGTTCTGAAAATAACAGCTTGATCCTCACAAGGTTTCTCCTTCATTACCTTAAAGTCTCAGCCCAAAGAAAAAAAAGCAATACTAGTCACACATCATCTGAATTTGGTGGTCTTGCAGACACAGCTACTCATGGGGTTATTTTGGTGGGTAAAAAAGTATTTTCCTGCAGAGCCCTGTTTTGGGTTTTGAGGATTGTGTCTGGTTTTGGAATCAGTAAAGAGTACAGACTTGGTTTGGAGAGATTAATTGGTGGGATGCTTGATGAAGCAACATTGGATGACTTGTTAGTATCTGGGCATGACAGGGGTGTTTATGATGTCAATCTTGTTATAAGGTTGATAAGAGTGTTTGCTAAAAGTGAGGGTGTTTCTGTGCAAAAGTTGAGGAAAGCTGGTAGGTTGATTGATAAGTATCTAGGTGAAATATCACCTGATCAGAATCTCAAGATTTCTAAATTTCTTGGAGTTGCAGAGAGTTTACCAGATTCTGCCAGGGACTGCTTTGATGGGGCCTACAGAGCCATTGATATCTATCTTGAGTCTCACCCAACTCTTTCATTTGAGGAGAGGTCAAGATTGTGCAGATGCCTAAATTATGAAAAGCTGAGCCTCGAAGCATGTAAAGAGCTCGCAAAGAATCCGAAAATCCCACCAAGAGTTGCAATTCAAGCGCTCATTTCTCAGCAATCCAAAGTAACAGCAACAGAAGAATTTGTACATGCCAGTCCATGTAGTACTGCAAGTGCAAGCAATCATTTTAATTCCCATTCGCATTCCAGTTCCTATTCCCATATGGTTCTGTACAACAATGGTGGTGCTGGTGCTGATAAAGATAGTTTTCCAGAAGAAAGCAGCTTAGATACAAAGCTAAATTTGCAGAGGATGCAATGGAGGGTGGTGGAGTTGGAGAAACTGTGCAGGGAAATGAAGGGTCAGATGTCAAAGATGGTTAAGAATAATGTCTTGAGTAGCAGTACCCCAACTCATGGTAGAGCTCTTCCTAGACTTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

561

Amino Acids

62.21

Weight (kDa)

8.59

Isoelectric Point (pI)

40.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	200 - 343	6e-22	NPH3 family
NPH3	PF03000	345 - 404	2.3e-20	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007978)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19850
fragaria_vesca	FvH4_4g36690 FvH4_4g36690
malus_domestica	MD13G1008200.v1.1
prunus_persica	Prupe.1G344900_v2.0.a1 Prupe.1G344900_v2.0.a1
pyrus_communis	pycom05g06860 pycom07g12620 pycom13g00670 pycom16g00540 pycom16g00550 pycom16g04040
rosa_chinensis	RchiOBHm_Chr4g0446401
rosa_laevigata	RLG00000005664
rosa_multiflora	Rmu_sc0008360.1_g000004 Rmu_sc0010778.1_g000006 Rmu_sc0018598.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386840
rosa_rugosa	Rorug04G0371100
rosa_samantha	Rh4AG432600 Rh4BG441800 Rh4CG459100 Rh4DG440500
rosa_wichuraiana	Rw4G036950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1001
AccB7I	CCANNNNNTGG	2 cut(s)	658, 1655
AccI	GTMKAC	1 cut(s)	423
AccIII	TCCGGA	1 cut(s)	514
AclWI	GGATC	1 cut(s)	685
AcsI	RAATTY	5 cut(s)	463, 770, 1124, 1379, 1540
AcuI	CTGAAG	1 cut(s)	396
AfaI	GTAC	6 cut(s)	137, 893, 1386, 1405, 1472, 1645
AfeI	AGCGCT	1 cut(s)	1341
AfiI	CCNNNNNNNGG	5 cut(s)	552, 658, 849, 850, 1655
AgsI	TTSAA	7 cut(s)	23, 94, 149, 237, 310, 397, 1337
AhlI	ACTAGT	2 cut(s)	364, 752
AjnI	CCWGG	2 cut(s)	163, 1160
Alw21I	GWGCWC	3 cut(s)	127, 1299, 1666
Alw26I	GTCTC	3 cut(s)	295, 730, 1215
AlwI	GGATC	1 cut(s)	685
AlwNI	CAGNNNCTG	2 cut(s)	1157, 1167
Ama87I	CYCGRG	1 cut(s)	139
Aor13HI	TCCGGA	1 cut(s)	514
Aor51HI	AGCGCT	1 cut(s)	1341
AoxI	GGCC	2 cut(s)	169, 1179
ApeKI	GCWGC	2 cut(s)	477, 1521
ApoI	RAATTY	5 cut(s)	463, 770, 1124, 1379, 1540
AseI	ATTAAT	2 cut(s)	33, 914
Asp700I	GAANNNNTTC	1 cut(s)	324
AspLEI	GCGC	1 cut(s)	1342
AspS9I	GGNCC	2 cut(s)	170, 1179
AsuC2I	CCSGG	2 cut(s)	140, 141
AsuHPI	GGTGA	3 cut(s)	1089, 1100, 1205
AvaI	CYCGRG	1 cut(s)	139
BanII	GRGCYC	4 cut(s)	127, 844, 1299, 1666
BarI	GAAGNNNNNNTAC	2 cut(s)	1368, 1400
BbsI	GAAGAC	2 cut(s)	498, 534
Bbv12I	GWGCWC	3 cut(s)	127, 1299, 1666
BbvI	GCAGC	2 cut(s)	489, 1533
BccI	CCATC	3 cut(s)	170, 1169, 1609
BciT130I	CCWGG	2 cut(s)	165, 1162
BclI	TGATCA	1 cut(s)	1102
BcnI	CCSGG	2 cut(s)	140, 141
BcoDI	GTCTC	3 cut(s)	295, 730, 1215
BcuI	ACTAGT	2 cut(s)	364, 752
BfaI	CTAG	4 cut(s)	365, 753, 1085, 1671
BfmI	CTRYAG	2 cut(s)	835, 1183
BfoI	RGCGCY	1 cut(s)	1343
BisI	GCNGC	2 cut(s)	478, 1522
BlpI	GCTNAGC	1 cut(s)	1274
BlsI	GCNGC	2 cut(s)	479, 1523
BmcAI	AGTACT	1 cut(s)	1405
Bme1390I	CCNGG	4 cut(s)	140, 141, 165, 1162
BmeT110I	CYCGRG	1 cut(s)	139
BmgT120I	GGNCC	2 cut(s)	170, 1179
BmiI	GGNNCC	1 cut(s)	1180
BmrFI	CCNGG	4 cut(s)	140, 141, 165, 1162
BmsI	GCATC	3 cut(s)	915, 1244, 1542
BpiI	GAAGAC	2 cut(s)	498, 534
BplI	GAGNNNNNCTC	6 cut(s)	109, 141, 176, 208, 275, 307
BpmI	CTGGAG	1 cut(s)	186
Bpu1102I	GCTNAGC	1 cut(s)	1274
BpuEI	CTTGAG	6 cut(s)	178, 350, 557, 1097, 1226, 1654
BpuMI	CCSGG	2 cut(s)	140, 141
Bsa29I	ATCGAT	1 cut(s)	153
BsaAI	YACGTR	1 cut(s)	135
BsaBI	GATNNNNATC	5 cut(s)	149, 990, 1080, 1107, 1200
BsaJI	CCNNGG	4 cut(s)	139, 140, 163, 1161
BsaWI	WCCGGW	1 cut(s)	514
BsaXI	ACNNNNNCTCC	2 cut(s)	1568, 1598
Bsc4I	CCNNNNNNNGG	5 cut(s)	552, 658, 849, 850, 1655
Bse1I	ACTGG	3 cut(s)	350, 1392, 1446
Bse3DI	GCAATG	2 cut(s)	217, 1562
Bse8I	GATNNNNATC	5 cut(s)	149, 990, 1080, 1107, 1200
BseAI	TCCGGA	1 cut(s)	514
BseBI	CCWGG	2 cut(s)	165, 1162
BseCI	ATCGAT	1 cut(s)	153
BseDI	CCNNGG	4 cut(s)	139, 140, 163, 1161
BseGI	GGATG	4 cut(s)	648, 930, 952, 1557
BseJI	GATNNNNATC	5 cut(s)	149, 990, 1080, 1107, 1200
BseLI	CCNNNNNNNGG	5 cut(s)	552, 658, 849, 850, 1655
BseMI	GCAATG	2 cut(s)	217, 1562
BseMII	CTCAG	7 cut(s)	140, 273, 473, 555, 741, 1265, 1364
BseNI	ACTGG	3 cut(s)	350, 1392, 1446
BseRI	GAGGAG	3 cut(s)	77, 239, 1247
BseXI	GCAGC	2 cut(s)	489, 1533
BsgI	GTGCAG	4 cut(s)	282, 459, 1270, 1606
BshFI	GGCC	2 cut(s)	171, 1181
BshVI	ATCGAT	1 cut(s)	153
BsiHKAI	GWGCWC	3 cut(s)	127, 1299, 1666
BsiHKCI	CYCGRG	1 cut(s)	139
BsiSI	CCGG	2 cut(s)	140, 515
BslFI	GGGAC	3 cut(s)	229, 348, 1178
BslI	CCNNNNNNNGG	5 cut(s)	552, 658, 849, 850, 1655
BsmAI	GTCTC	3 cut(s)	295, 730, 1215
BsmFI	GGGAC	3 cut(s)	229, 348, 1178
BsmI	GAATGC	1 cut(s)	1441
BsnI	GGCC	2 cut(s)	171, 1181
BsoBI	CYCGRG	1 cut(s)	139
Bsp1286I	GDGCHC	4 cut(s)	127, 844, 1299, 1666
Bsp13I	TCCGGA	1 cut(s)	514
Bsp1407I	TGTACA	2 cut(s)	1384, 1470
Bsp143I	GATC	5 cut(s)	99, 189, 633, 690, 1102
Bsp1720I	GCTNAGC	1 cut(s)	1274
BspANI	GGCC	2 cut(s)	171, 1181
BspCNI	CTCAG	7 cut(s)	139, 274, 472, 556, 740, 1266, 1363
BspDI	ATCGAT	1 cut(s)	153
BspEI	TCCGGA	1 cut(s)	514
BspLI	GGNNCC	1 cut(s)	1180
BspMAI	CTGCAG	1 cut(s)	839
BspPI	GGATC	1 cut(s)	685
BspQI	GCTCTTC	2 cut(s)	115, 1671
BsrDI	GCAATG	2 cut(s)	217, 1562
BsrGI	TGTACA	2 cut(s)	1384, 1470
BsrI	ACTGG	3 cut(s)	350, 1392, 1446
BssECI	CCNNGG	4 cut(s)	139, 140, 163, 1161
BssMI	GATC	5 cut(s)	99, 189, 633, 690, 1102
Bst2UI	CCWGG	2 cut(s)	165, 1162
Bst4CI	ACNGT	3 cut(s)	232, 339, 1584
Bst6I	CTCTTC	2 cut(s)	115, 1671
BstAPI	GCANNNNNTGC	2 cut(s)	455, 1552
BstAUI	TGTACA	2 cut(s)	1384, 1470
BstBAI	YACGTR	1 cut(s)	135
BstC8I	GCNNGC	2 cut(s)	1299, 1417
BstDEI	CTNAG	8 cut(s)	126, 282, 459, 564, 727, 1274, 1350, 1525
BstENI	CCTNNNNNAGG	1 cut(s)	550
BstF5I	GGATG	4 cut(s)	648, 930, 952, 1557
BstH2I	RGCGCY	1 cut(s)	1343
BstHHI	GCGC	1 cut(s)	1342
BstKTI	GATC	5 cut(s)	102, 192, 636, 693, 1105
BstMAI	GTCTC	3 cut(s)	295, 730, 1215
BstMBI	GATC	5 cut(s)	99, 189, 633, 690, 1102
BstMWI	GCNNNNNNNGC	8 cut(s)	378, 446, 455, 791, 1187, 1337, 1543, 1552
BstNI	CCWGG	2 cut(s)	165, 1162
BstNSI	RCATGY	2 cut(s)	1290, 1391
BstSCI	CCNGG	4 cut(s)	138, 139, 163, 1160
BstSFI	CTRYAG	2 cut(s)	835, 1183
BstSNI	TACGTA	1 cut(s)	135
BstV1I	GCAGC	2 cut(s)	489, 1533
BstV2I	GAAGAC	2 cut(s)	498, 534
BstXI	CCANNNNNNTGG	1 cut(s)	35
Bsu15I	ATCGAT	1 cut(s)	153
BsuRI	GGCC	2 cut(s)	171, 1181
BsuTUI	ATCGAT	1 cut(s)	153
BtsCI	GGATG	4 cut(s)	648, 930, 952, 1557
Cac8I	GCNNGC	2 cut(s)	1299, 1417
CaiI	CAGNNNCTG	2 cut(s)	1157, 1167
CfoI	GCGC	1 cut(s)	1342
Cfr13I	GGNCC	2 cut(s)	170, 1179
Cfr9I	CCCGGG	1 cut(s)	139
ClaI	ATCGAT	1 cut(s)	153
Csp6I	GTAC	6 cut(s)	136, 892, 1385, 1404, 1471, 1644
CspCI	CAANNNNNGTGG	2 cut(s)	1462, 1497
CviAII	CATG	7 cut(s)	351, 800, 968, 1287, 1388, 1398, 1655
CviQI	GTAC	6 cut(s)	136, 892, 1385, 1404, 1471, 1644
DdeI	CTNAG	8 cut(s)	126, 282, 459, 564, 727, 1274, 1350, 1525
DpnI	GATC	5 cut(s)	101, 191, 635, 692, 1104
DpnII	GATC	5 cut(s)	99, 189, 633, 690, 1102
Eam1104I	CTCTTC	2 cut(s)	115, 1671
EarI	CTCTTC	2 cut(s)	115, 1671
Ecl136II	GAGCTC	3 cut(s)	125, 1297, 1664
Eco105I	TACGTA	1 cut(s)	135
Eco24I	GRGCYC	4 cut(s)	127, 844, 1299, 1666
Eco32I	GATATC	1 cut(s)	1198
Eco47III	AGCGCT	1 cut(s)	1341
Eco53kI	GAGCTC	3 cut(s)	125, 1297, 1664
Eco57I	CTGAAG	1 cut(s)	396
Eco88I	CYCGRG	1 cut(s)	139
EcoICRI	GAGCTC	3 cut(s)	125, 1297, 1664
EcoNI	CCTNNNNNAGG	1 cut(s)	550
EcoO109I	RGGNCCY	2 cut(s)	170, 1179
EcoRI	GAATTC	1 cut(s)	463
EcoRII	CCWGG	2 cut(s)	163, 1160
EcoRV	GATATC	1 cut(s)	1198
EcoT38I	GRGCYC	4 cut(s)	127, 844, 1299, 1666
FaeI	CATG	7 cut(s)	354, 803, 971, 1290, 1391, 1401, 1658
FalI	AAGNNNNNCTT	2 cut(s)	580, 612
FaqI	GGGAC	3 cut(s)	229, 348, 1178
FatI	CATG	7 cut(s)	350, 799, 967, 1286, 1387, 1397, 1654
FauNDI	CATATG	1 cut(s)	1461
FbaI	TGATCA	1 cut(s)	1102
FblI	GTMKAC	1 cut(s)	423
Fnu4HI	GCNGC	2 cut(s)	478, 1522
FokI	GGATG	4 cut(s)	635, 937, 959, 1564
FriOI	GRGCYC	4 cut(s)	127, 844, 1299, 1666
Fsp4HI	GCNGC	2 cut(s)	478, 1522
FspBI	CTAG	4 cut(s)	365, 753, 1085, 1671
GlaI	GCGC	1 cut(s)	1341
GluI	GCNGC	2 cut(s)	478, 1522
GsuI	CTGGAG	1 cut(s)	186
HaeII	RGCGCY	1 cut(s)	1343
HaeIII	GGCC	2 cut(s)	171, 1181
HapII	CCGG	2 cut(s)	140, 515
HhaI	GCGC	1 cut(s)	1342
Hin1II	CATG	7 cut(s)	354, 803, 971, 1290, 1391, 1401, 1658
Hin6I	GCGC	1 cut(s)	1340
HinP1I	GCGC	1 cut(s)	1340
HindIII	AAGCTT	1 cut(s)	594
HpaII	CCGG	2 cut(s)	140, 515
HphI	GGTGA	3 cut(s)	1089, 1100, 1205
Hpy166II	GTNNAC	2 cut(s)	424, 1148
Hpy188I	TCNGA	9 cut(s)	129, 462, 469, 536, 676, 769, 1107, 1311, 1605
Hpy8I	GTNNAC	2 cut(s)	424, 1148
HpyAV	CCTTC	3 cut(s)	504, 719, 1591
HpyCH4III	ACNGT	3 cut(s)	232, 339, 1584
HpyCH4IV	ACGT	1 cut(s)	134
HpyF10VI	GCNNNNNNNGC	8 cut(s)	378, 446, 455, 791, 1187, 1337, 1543, 1552
HpyF3I	CTNAG	8 cut(s)	126, 282, 459, 564, 727, 1274, 1350, 1525
HpySE526I	ACGT	1 cut(s)	134
Hsp92II	CATG	7 cut(s)	354, 803, 971, 1290, 1391, 1401, 1658
HspAI	GCGC	1 cut(s)	1340
Kpn2I	TCCGGA	1 cut(s)	514
Ksp22I	TGATCA	1 cut(s)	1102
Kzo9I	GATC	5 cut(s)	99, 189, 633, 690, 1102
LguI	GCTCTTC	2 cut(s)	115, 1671
Lsp1109I	GCAGC	2 cut(s)	489, 1533
LweI	GCATC	3 cut(s)	915, 1244, 1542
MaeI	CTAG	4 cut(s)	365, 753, 1085, 1671
MaeII	ACGT	1 cut(s)	134
MaeIII	GTNAC	5 cut(s)	203, 487, 567, 755, 1363
MalI	GATC	5 cut(s)	101, 191, 635, 692, 1104
MboI	GATC	5 cut(s)	99, 189, 633, 690, 1102
MhlI	GDGCHC	4 cut(s)	127, 844, 1299, 1666
MluCI	AATT	9 cut(s)	463, 770, 915, 1124, 1261, 1332, 1379, 1429, 1540
MlyI	GAGTC	3 cut(s)	395, 575, 1217
MmeI	TCCRAC	2 cut(s)	492, 1554
MroI	TCCGGA	1 cut(s)	514
MroXI	GAANNNNTTC	1 cut(s)	324
MseI	TTAA	5 cut(s)	33, 720, 914, 1428, 1620
MslI	CAYNNNNRTG	2 cut(s)	33, 258
MspI	CCGG	2 cut(s)	140, 515
MspR9I	CCNGG	4 cut(s)	140, 141, 165, 1162
Mva1269I	GAATGC	1 cut(s)	1441
MvaI	CCWGG	2 cut(s)	165, 1162
MwoI	GCNNNNNNNGC	8 cut(s)	378, 446, 455, 791, 1187, 1337, 1543, 1552
NciI	CCSGG	2 cut(s)	140, 141
NdeI	CATATG	1 cut(s)	1461
NdeII	GATC	5 cut(s)	99, 189, 633, 690, 1102
NlaIII	CATG	7 cut(s)	354, 803, 971, 1290, 1391, 1401, 1658
NlaIV	GGNNCC	1 cut(s)	1180
NmuCI	GTSAC	2 cut(s)	567, 755
NspI	RCATGY	2 cut(s)	1290, 1391
PciSI	GCTCTTC	2 cut(s)	115, 1671
PctI	GAATGC	1 cut(s)	1441
PdmI	GAANNNNTTC	1 cut(s)	324
PfeI	GAWTC	7 cut(s)	198, 219, 407, 879, 1108, 1154, 1306
PflMI	CCANNNNNTGG	2 cut(s)	658, 1655
PkrI	GCNGC	2 cut(s)	479, 1523
PleI	GAGTC	3 cut(s)	394, 574, 1216
PpsI	GAGTC	3 cut(s)	394, 574, 1216
Ppu21I	YACGTR	1 cut(s)	135
PshBI	ATTAAT	2 cut(s)	33, 914
PsiI	TTATAA	1 cut(s)	1001
Psp124BI	GAGCTC	3 cut(s)	127, 1299, 1666
Psp6I	CCWGG	2 cut(s)	163, 1160
PspGI	CCWGG	2 cut(s)	163, 1160
PspN4I	GGNNCC	1 cut(s)	1180
PspPI	GGNCC	2 cut(s)	170, 1179
PstI	CTGCAG	1 cut(s)	839
PstNI	CAGNNNCTG	2 cut(s)	1157, 1167
RsaI	GTAC	6 cut(s)	137, 893, 1386, 1405, 1472, 1645
RsaNI	GTAC	6 cut(s)	136, 892, 1385, 1404, 1471, 1644
RseI	CAYNNNNRTG	2 cut(s)	33, 258
SacI	GAGCTC	3 cut(s)	127, 1299, 1666
SapI	GCTCTTC	2 cut(s)	115, 1671
SaqAI	TTAA	5 cut(s)	33, 720, 914, 1428, 1620
SatI	GCNGC	2 cut(s)	478, 1522
Sau3AI	GATC	5 cut(s)	99, 189, 633, 690, 1102
Sau96I	GGNCC	2 cut(s)	170, 1179
ScaI	AGTACT	1 cut(s)	1405
SchI	GAGTC	3 cut(s)	395, 575, 1217
ScrFI	CCNGG	4 cut(s)	140, 141, 165, 1162
SduI	GDGCHC	4 cut(s)	127, 844, 1299, 1666
SfaNI	GCATC	3 cut(s)	915, 1244, 1542
SfcI	CTRYAG	2 cut(s)	835, 1183
SmaI	CCCGGG	1 cut(s)	141
SmiMI	CAYNNNNRTG	2 cut(s)	33, 258
SmlI	CTYRAG	6 cut(s)	193, 329, 572, 1112, 1205, 1633
SmoI	CTYRAG	6 cut(s)	193, 329, 572, 1112, 1205, 1633
SnaBI	TACGTA	1 cut(s)	135
SpeI	ACTAGT	2 cut(s)	364, 752
Sse9I	AATT	9 cut(s)	463, 770, 915, 1124, 1261, 1332, 1379, 1429, 1540
SspMI	CTAG	4 cut(s)	365, 753, 1085, 1671
SstI	GAGCTC	3 cut(s)	127, 1299, 1666
StyD4I	CCNGG	4 cut(s)	138, 139, 163, 1160
TaaI	ACNGT	3 cut(s)	232, 339, 1584
TaiI	ACGT	1 cut(s)	137
TaqI	TCGA	2 cut(s)	153, 1281
TasI	AATT	9 cut(s)	463, 770, 915, 1124, 1261, 1332, 1379, 1429, 1540
TatI	WGTACW	4 cut(s)	891, 1384, 1403, 1470
TfiI	GAWTC	7 cut(s)	198, 219, 407, 879, 1108, 1154, 1306
Tru1I	TTAA	5 cut(s)	33, 720, 914, 1428, 1620
Tru9I	TTAA	5 cut(s)	33, 720, 914, 1428, 1620
TseFI	GTSAC	2 cut(s)	567, 755
TseI	GCWGC	2 cut(s)	477, 1521
Tsp45I	GTSAC	2 cut(s)	567, 755
TspDTI	ATGAA	8 cut(s)	489, 498, 573, 701, 948, 1215, 1281, 1610
TspMI	CCCGGG	1 cut(s)	139
Van91I	CCANNNNNTGG	2 cut(s)	658, 1655
VspI	ATTAAT	2 cut(s)	33, 914
XagI	CCTNNNNNAGG	1 cut(s)	550
XapI	RAATTY	5 cut(s)	463, 770, 1124, 1379, 1540
XceI	RCATGY	2 cut(s)	1290, 1391
XmaI	CCCGGG	1 cut(s)	139
XmiI	GTMKAC	1 cut(s)	423
XmnI	GAANNNNTTC	1 cut(s)	324
XspI	CTAG	4 cut(s)	365, 753, 1085, 1671
ZrmI	AGTACT	1 cut(s)	1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.