Belongs to the NPH3 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19850 |
| fragaria_vesca | FvH4_4g36690 FvH4_4g36690 |
| malus_domestica | MD13G1008200.v1.1 |
| prunus_persica | Prupe.1G344900_v2.0.a1 Prupe.1G344900_v2.0.a1 |
| pyrus_communis | pycom05g06860 pycom07g12620 pycom13g00670 pycom16g00540 pycom16g00550 pycom16g04040 |
| rosa_chinensis | RchiOBHm_Chr4g0446401 |
| rosa_laevigata | RLG00000005664 |
| rosa_multiflora | Rmu_sc0008360.1_g000004 Rmu_sc0010778.1_g000006 Rmu_sc0018598.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00386840 |
| rosa_rugosa | Rorug04G0371100 |
| rosa_samantha | Rh4AG432600 Rh4BG441800 Rh4CG459100 Rh4DG440500 |
| rosa_wichuraiana | Rw4G036950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 344 |
| AccI | GTMKAC | 1 cut(s) | 54 |
| AciI | CCGC | 1 cut(s) | 6 |
| AclWI | GGATC | 2 cut(s) | 131, 652 |
| AcsI | RAATTY | 2 cut(s) | 115, 442 |
| AfaI | GTAC | 1 cut(s) | 342 |
| AflIII | ACRYGT | 2 cut(s) | 219, 468 |
| AgsI | TTSAA | 2 cut(s) | 216, 334 |
| AhlI | ACTAGT | 1 cut(s) | 343 |
| AjiI | CACGTC | 2 cut(s) | 471, 580 |
| AjnI | CCWGG | 1 cut(s) | 119 |
| AluBI | AGCT | 9 cut(s) | 49, 71, 268, 360, 549, 654, 694, 700, 736 |
| AluI | AGCT | 9 cut(s) | 49, 71, 268, 360, 549, 654, 694, 700, 736 |
| Alw21I | GWGCWC | 2 cut(s) | 551, 702 |
| AlwI | GGATC | 2 cut(s) | 131, 652 |
| AoxI | GGCC | 2 cut(s) | 148, 582 |
| ApeKI | GCWGC | 5 cut(s) | 25, 37, 46, 360, 704 |
| ApoI | RAATTY | 2 cut(s) | 115, 442 |
| AspS9I | GGNCC | 3 cut(s) | 149, 583, 711 |
| AsuC2I | CCSGG | 2 cut(s) | 144, 530 |
| AsuHPI | GGTGA | 1 cut(s) | 81 |
| AvaII | GGWCC | 1 cut(s) | 711 |
| BanII | GRGCYC | 2 cut(s) | 551, 702 |
| BauI | CACGAG | 1 cut(s) | 751 |
| BbsI | GAAGAC | 1 cut(s) | 474 |
| Bbv12I | GWGCWC | 2 cut(s) | 551, 702 |
| BbvI | GCAGC | 5 cut(s) | 37, 49, 58, 347, 691 |
| BccI | CCATC | 4 cut(s) | 94, 149, 545, 728 |
| BceAI | ACGGC | 1 cut(s) | 208 |
| BciT130I | CCWGG | 1 cut(s) | 121 |
| BcnI | CCSGG | 2 cut(s) | 144, 530 |
| BcuI | ACTAGT | 1 cut(s) | 343 |
| BfaI | CTAG | 2 cut(s) | 72, 344 |
| BisI | GCNGC | 5 cut(s) | 26, 38, 47, 361, 705 |
| BlsI | GCNGC | 5 cut(s) | 27, 39, 48, 362, 706 |
| Bme1390I | CCNGG | 3 cut(s) | 121, 144, 530 |
| Bme18I | GGWCC | 1 cut(s) | 711 |
| BmgBI | CACGTC | 2 cut(s) | 471, 580 |
| BmgT120I | GGNCC | 3 cut(s) | 149, 583, 711 |
| BmiI | GGNNCC | 2 cut(s) | 712, 713 |
| BmrFI | CCNGG | 3 cut(s) | 121, 144, 530 |
| BmsI | GCATC | 3 cut(s) | 12, 512, 737 |
| BpiI | GAAGAC | 1 cut(s) | 474 |
| BpmI | CTGGAG | 1 cut(s) | 602 |
| BpuEI | CTTGAG | 3 cut(s) | 329, 338, 716 |
| BpuMI | CCSGG | 2 cut(s) | 144, 530 |
| Bsa29I | ATCGAT | 1 cut(s) | 132 |
| BsaBI | GATNNNNATC | 1 cut(s) | 128 |
| BsaJI | CCNNGG | 3 cut(s) | 250, 528, 685 |
| BsaWI | WCCGGW | 1 cut(s) | 392 |
| Bse1I | ACTGG | 1 cut(s) | 498 |
| Bse3DI | GCAATG | 1 cut(s) | 763 |
| Bse8I | GATNNNNATC | 1 cut(s) | 128 |
| BseBI | CCWGG | 1 cut(s) | 121 |
| BseCI | ATCGAT | 1 cut(s) | 132 |
| BseDI | CCNNGG | 3 cut(s) | 250, 528, 685 |
| BseGI | GGATG | 2 cut(s) | 27, 752 |
| BseJI | GATNNNNATC | 1 cut(s) | 128 |
| BseMI | GCAATG | 1 cut(s) | 763 |
| BseMII | CTCAG | 2 cut(s) | 452, 751 |
| BseNI | ACTGG | 1 cut(s) | 498 |
| BseRI | GAGGAG | 1 cut(s) | 605 |
| BseXI | GCAGC | 5 cut(s) | 37, 49, 58, 347, 691 |
| BseYI | CCCAGC | 3 cut(s) | 17, 707, 732 |
| BsgI | GTGCAG | 2 cut(s) | 65, 402 |
| BshFI | GGCC | 2 cut(s) | 150, 584 |
| BshVI | ATCGAT | 1 cut(s) | 132 |
| BsiHKAI | GWGCWC | 2 cut(s) | 551, 702 |
| BsiSI | CCGG | 4 cut(s) | 143, 393, 530, 555 |
| BslFI | GGGAC | 2 cut(s) | 327, 697 |
| BsmFI | GGGAC | 2 cut(s) | 327, 697 |
| BsnI | GGCC | 2 cut(s) | 150, 584 |
| Bsp1286I | GDGCHC | 2 cut(s) | 551, 702 |
| Bsp143I | GATC | 4 cut(s) | 108, 123, 432, 657 |
| BspACI | CCGC | 1 cut(s) | 6 |
| BspANI | GGCC | 2 cut(s) | 150, 584 |
| BspCNI | CTCAG | 2 cut(s) | 451, 750 |
| BspDI | ATCGAT | 1 cut(s) | 132 |
| BspLI | GGNNCC | 2 cut(s) | 712, 713 |
| BspPI | GGATC | 2 cut(s) | 131, 652 |
| BspQI | GCTCTTC | 1 cut(s) | 677 |
| BsrDI | GCAATG | 1 cut(s) | 763 |
| BsrI | ACTGG | 1 cut(s) | 498 |
| BssECI | CCNNGG | 3 cut(s) | 250, 528, 685 |
| BssMI | GATC | 4 cut(s) | 108, 123, 432, 657 |
| BssSI | CACGAG | 1 cut(s) | 751 |
| BssT1I | CCWWGG | 2 cut(s) | 250, 685 |
| Bst2BI | CACGAG | 1 cut(s) | 751 |
| Bst2UI | CCWGG | 1 cut(s) | 121 |
| Bst4CI | ACNGT | 2 cut(s) | 96, 211 |
| Bst6I | CTCTTC | 2 cut(s) | 526, 677 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 43, 425 |
| BstC8I | GCNNGC | 3 cut(s) | 426, 692, 702 |
| BstDEI | CTNAG | 2 cut(s) | 438, 737 |
| BstF5I | GGATG | 2 cut(s) | 27, 752 |
| BstKTI | GATC | 4 cut(s) | 111, 126, 435, 660 |
| BstMBI | GATC | 4 cut(s) | 108, 123, 432, 657 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 34, 43, 46, 357, 425, 434, 555 |
| BstNI | CCWGG | 1 cut(s) | 121 |
| BstSCI | CCNGG | 3 cut(s) | 119, 142, 528 |
| BstV1I | GCAGC | 5 cut(s) | 37, 49, 58, 347, 691 |
| BstV2I | GAAGAC | 1 cut(s) | 474 |
| Bsu15I | ATCGAT | 1 cut(s) | 132 |
| BsuRI | GGCC | 2 cut(s) | 150, 584 |
| BsuTUI | ATCGAT | 1 cut(s) | 132 |
| BtgZI | GCGATG | 1 cut(s) | 706 |
| BtrI | CACGTC | 2 cut(s) | 471, 580 |
| BtsCI | GGATG | 2 cut(s) | 27, 752 |
| BtsI | GCAGTG | 2 cut(s) | 232, 419 |
| BtsIMutI | CAGTG | 3 cut(s) | 232, 419, 491 |
| Cac8I | GCNNGC | 3 cut(s) | 426, 692, 702 |
| Cfr13I | GGNCC | 3 cut(s) | 149, 583, 711 |
| ClaI | ATCGAT | 1 cut(s) | 132 |
| Csp6I | GTAC | 1 cut(s) | 341 |
| CviAII | CATG | 3 cut(s) | 256, 641, 667 |
| CviQI | GTAC | 1 cut(s) | 341 |
| DdeI | CTNAG | 2 cut(s) | 438, 737 |
| DpnI | GATC | 4 cut(s) | 110, 125, 434, 659 |
| DpnII | GATC | 4 cut(s) | 108, 123, 432, 657 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 344 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 344 |
| Eam1104I | CTCTTC | 2 cut(s) | 526, 677 |
| EarI | CTCTTC | 2 cut(s) | 526, 677 |
| Ecl136II | GAGCTC | 2 cut(s) | 549, 700 |
| Eco130I | CCWWGG | 2 cut(s) | 250, 685 |
| Eco24I | GRGCYC | 2 cut(s) | 551, 702 |
| Eco47I | GGWCC | 1 cut(s) | 711 |
| Eco53kI | GAGCTC | 2 cut(s) | 549, 700 |
| EcoICRI | GAGCTC | 2 cut(s) | 549, 700 |
| EcoO109I | RGGNCCY | 2 cut(s) | 149, 711 |
| EcoRI | GAATTC | 1 cut(s) | 442 |
| EcoRII | CCWGG | 1 cut(s) | 119 |
| EcoT14I | CCWWGG | 2 cut(s) | 250, 685 |
| EcoT38I | GRGCYC | 2 cut(s) | 551, 702 |
| ErhI | CCWWGG | 2 cut(s) | 250, 685 |
| FaeI | CATG | 3 cut(s) | 259, 644, 670 |
| FaiI | YATR | 4 cut(s) | 257, 642, 668, 744 |
| FaqI | GGGAC | 2 cut(s) | 327, 697 |
| FatI | CATG | 3 cut(s) | 255, 640, 666 |
| FblI | GTMKAC | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 5 cut(s) | 26, 38, 47, 361, 705 |
| FokI | GGATG | 2 cut(s) | 34, 759 |
| FriOI | GRGCYC | 2 cut(s) | 551, 702 |
| Fsp4HI | GCNGC | 5 cut(s) | 26, 38, 47, 361, 705 |
| FspBI | CTAG | 2 cut(s) | 72, 344 |
| GluI | GCNGC | 5 cut(s) | 26, 38, 47, 361, 705 |
| GsaI | CCCAGC | 3 cut(s) | 21, 711, 736 |
| GsuI | CTGGAG | 1 cut(s) | 602 |
| HaeIII | GGCC | 2 cut(s) | 150, 584 |
| HapII | CCGG | 4 cut(s) | 143, 393, 530, 555 |
| Hin1II | CATG | 3 cut(s) | 259, 644, 670 |
| HincII | GTYRAC | 1 cut(s) | 55 |
| HindII | GTYRAC | 1 cut(s) | 55 |
| HindIII | AAGCTT | 1 cut(s) | 266 |
| HinfI | GANTC | 6 cut(s) | 79, 177, 198, 386, 516, 533 |
| HpaII | CCGG | 4 cut(s) | 143, 393, 530, 555 |
| HphI | GGTGA | 1 cut(s) | 81 |
| Hpy166II | GTNNAC | 1 cut(s) | 55 |
| Hpy188I | TCNGA | 3 cut(s) | 441, 448, 515 |
| Hpy188III | TCNNGA | 4 cut(s) | 174, 308, 355, 619 |
| Hpy8I | GTNNAC | 1 cut(s) | 55 |
| Hpy99I | CGWCG | 5 cut(s) | 17, 56, 59, 100, 475 |
| HpyAV | CCTTC | 4 cut(s) | 486, 596, 736, 756 |
| HpyCH4III | ACNGT | 2 cut(s) | 96, 211 |
| HpyCH4IV | ACGT | 5 cut(s) | 219, 339, 450, 470, 579 |
| HpyCH4V | TGCA | 8 cut(s) | 25, 46, 242, 289, 419, 428, 503, 756 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 34, 43, 46, 357, 425, 434, 555 |
| HpyF3I | CTNAG | 2 cut(s) | 438, 737 |
| HpySE526I | ACGT | 5 cut(s) | 219, 339, 450, 470, 579 |
| Hsp92II | CATG | 3 cut(s) | 259, 644, 670 |
| KflI | GGGWCCC | 1 cut(s) | 711 |
| Kzo9I | GATC | 4 cut(s) | 108, 123, 432, 657 |
| LguI | GCTCTTC | 1 cut(s) | 677 |
| Lsp1109I | GCAGC | 5 cut(s) | 37, 49, 58, 347, 691 |
| LweI | GCATC | 3 cut(s) | 12, 512, 737 |
| MaeI | CTAG | 2 cut(s) | 72, 344 |
| MaeII | ACGT | 5 cut(s) | 219, 339, 450, 470, 579 |
| MaeIII | GTNAC | 1 cut(s) | 182 |
| MalI | GATC | 4 cut(s) | 110, 125, 434, 659 |
| MboI | GATC | 4 cut(s) | 108, 123, 432, 657 |
| MboII | GAAGA | 6 cut(s) | 238, 364, 474, 480, 513, 664 |
| MhlI | GDGCHC | 2 cut(s) | 551, 702 |
| MluCI | AATT | 3 cut(s) | 115, 280, 442 |
| MlyI | GAGTC | 3 cut(s) | 88, 380, 510 |
| MnlI | CCTC | 9 cut(s) | 140, 287, 304, 362, 374, 470, 626, 671, 686 |
| MspI | CCGG | 4 cut(s) | 143, 393, 530, 555 |
| MspR9I | CCNGG | 3 cut(s) | 121, 144, 530 |
| MvaI | CCWGG | 1 cut(s) | 121 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 34, 43, 46, 357, 425, 434, 555 |
| NciI | CCSGG | 2 cut(s) | 144, 530 |
| NdeII | GATC | 4 cut(s) | 108, 123, 432, 657 |
| NlaIII | CATG | 3 cut(s) | 259, 644, 670 |
| NlaIV | GGNNCC | 2 cut(s) | 712, 713 |
| NmeAIII | GCCGAG | 1 cut(s) | 570 |
| PciSI | GCTCTTC | 1 cut(s) | 677 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 476 |
| PfeI | GAWTC | 3 cut(s) | 177, 198, 533 |
| PfoI | TCCNGGA | 2 cut(s) | 119, 142 |
| PkrI | GCNGC | 5 cut(s) | 27, 39, 48, 362, 706 |
| PleI | GAGTC | 3 cut(s) | 87, 380, 510 |
| PpsI | GAGTC | 3 cut(s) | 87, 380, 510 |
| PpuMI | RGGWCCY | 1 cut(s) | 711 |
| Psp124BI | GAGCTC | 2 cut(s) | 551, 702 |
| Psp5II | RGGWCCY | 1 cut(s) | 711 |
| Psp6I | CCWGG | 1 cut(s) | 119 |
| PspFI | CCCAGC | 3 cut(s) | 17, 707, 732 |
| PspGI | CCWGG | 1 cut(s) | 119 |
| PspN4I | GGNNCC | 2 cut(s) | 712, 713 |
| PspPI | GGNCC | 3 cut(s) | 149, 583, 711 |
| PspPPI | RGGWCCY | 1 cut(s) | 711 |
| RsaI | GTAC | 1 cut(s) | 342 |
| RsaNI | GTAC | 1 cut(s) | 341 |
| SacI | GAGCTC | 2 cut(s) | 551, 702 |
| SalI | GTCGAC | 1 cut(s) | 53 |
| SapI | GCTCTTC | 1 cut(s) | 677 |
| SatI | GCNGC | 5 cut(s) | 26, 38, 47, 361, 705 |
| Sau3AI | GATC | 4 cut(s) | 108, 123, 432, 657 |
| Sau96I | GGNCC | 3 cut(s) | 149, 583, 711 |
| SchI | GAGTC | 3 cut(s) | 88, 380, 510 |
| ScrFI | CCNGG | 3 cut(s) | 121, 144, 530 |
| SduI | GDGCHC | 2 cut(s) | 551, 702 |
| SfaNI | GCATC | 3 cut(s) | 12, 512, 737 |
| SgrDI | CGTCGACG | 1 cut(s) | 53 |
| SinI | GGWCC | 1 cut(s) | 711 |
| SmlI | CTYRAG | 3 cut(s) | 308, 353, 695 |
| SmoI | CTYRAG | 3 cut(s) | 308, 353, 695 |
| SpeI | ACTAGT | 1 cut(s) | 343 |
| Sse9I | AATT | 3 cut(s) | 115, 280, 442 |
| SsiI | CCGC | 1 cut(s) | 6 |
| SspMI | CTAG | 2 cut(s) | 72, 344 |
| SstI | GAGCTC | 2 cut(s) | 551, 702 |
| StyD4I | CCNGG | 3 cut(s) | 119, 142, 528 |
| StyI | CCWWGG | 2 cut(s) | 250, 685 |
| TaaI | ACNGT | 2 cut(s) | 96, 211 |
| TaiI | ACGT | 5 cut(s) | 222, 342, 453, 473, 582 |
| TaqI | TCGA | 8 cut(s) | 54, 98, 126, 132, 175, 321, 375, 573 |
| TaqII | GACCGA | 1 cut(s) | 275 |
| TasI | AATT | 3 cut(s) | 115, 280, 442 |
| TfiI | GAWTC | 3 cut(s) | 177, 198, 533 |
| TscAI | CASTG | 3 cut(s) | 239, 426, 498 |
| TseI | GCWGC | 5 cut(s) | 25, 37, 46, 360, 704 |
| TspDTI | ATGAA | 2 cut(s) | 474, 657 |
| TspGWI | ACGGA | 1 cut(s) | 651 |
| TspRI | CASTG | 3 cut(s) | 239, 426, 498 |
| VpaK11BI | GGWCC | 1 cut(s) | 711 |
| XapI | RAATTY | 2 cut(s) | 115, 442 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 740 |
| XmiI | GTMKAC | 1 cut(s) | 54 |
| XspI | CTAG | 2 cut(s) | 72, 344 |