FvH4_4g36860

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
33586297 .. 33597609
11313 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g36860.t1

Sequence Viewer

Length: 3084 bp
ATGATGTATGCAAGGAGAATTAAGTGCAGAAATCAGAGATGGATGCTTCAGCTGTCCAAATCAATAAAGCCAAACTACGTTTGTTCTTCTCAATCTTTGGGCCGCACAACAGTTCCTTCAAACTATCACTCACATGCTAGTTTTATTAGAAGCCGTCCCATAGATTCGTTCACATTGCGAAGTGTTGCTTCTGCTAATAGTTGCACTGATTTGCAAGTGAGGTCAAATACGTGTTTGAAGGGTAGTCAGTTACGCTTCTTCAGTTCAGAAGGCGATGGAAGAAATGCAAACGAGGGTAAACAGCTGCCAGTGAAAGATGGTGCTAAGTTTGATAAAGAAAAGACTTCGCAAGAAAAGGCCGGGAAAGATGTGAGGCGTTCTGATGCACACGCTCTACTTGGAGAGCAAGATCAAAAGGAATGGCTTAATAGTCGCAAACTTACCATTGAGAGTAAAAAGAAAGAATCACCTTTCTTGACCAGACAAGAGAAGTTCAAAAATGAGTTTCTATGGAGAGTTGTTCCATGGGAGAAGATAACTGTTTCATGGGAGACTTTTCCTTACCACATCGATGAACCCACCAAAACTCTTTTGATGGAATGCGCGGCTGCTCATTTGAAACATAAAAAGTTCACTTCTACTTATGGTTCTCGTTTGACATCTTCAAGCGGCAGAATACTGCTTCAGAGTGCTCCAGGCACTGAGCTTTACCGTGAAAGATTAGTTAGGGCTCTAGCACGAGATCTTCAAGTTCCACTACTCGTGCTGGACAGCAGTGTTCTTGCTCCTTATGATTTTGGTGATGATTGTGAAAATGAGTCTGAATCAGACGATGATGCTGTGGATGAGGGTACATCAGAGTCAGAGATTGATGATGAGAATGATGCTAGTAATGAAGAAGACTGGACTAGTAGTAATGAGGCAAAGTCAGATGGTAGTGACAAAGATGAAGCTGATCTGCATGCAAAGGCTGAAGCAGCCCTCAAGAAGCTTATTCCTATTGATCAATTTTCAAAGATGGTATCTGGGGAGATTGATGTTGAATCTGAGTCCTCAAAGTCAGAAGCTGCTGAACCCACAGATAAATCCAAAGAGTCCAAACAACCACTGAAGAAAGGTGATCGGGTGAAGTATGTTGGGCCTACTTTACGCGTTGAAGCTGATAACAGGATCATGTTGGGGAAAATATCAACATCTGATGGTCCAAGGAAAGCGTATACCATTTTCCGTGGCAGGCCTTTACCGAATGGTCAACTTGGGGAGGTATTTGAGGTGAGCGGAGATCGAATTGCTGTTATATTGGATATAAATGATGACCCTGGAAGTGATGTGGATAAAGAGGAGAAAGAAGAAGACCAGCCTGCGAATCCACCAGTTTACTGGATACATGCAAATCATGTTGAGCATCTTACTGACACTCAGACTGAGGATTGCTACTTTGCAATGGAGGCCCTACGTGAGGTCTTGCATGCCAAGCAACCTCTTATTGTCTATTTTCCAGACTCTTCTCAATGGTTGTCTAGGGCAGTTCCCAAGTCAAGCAGGAAGGAGTTTGTCAATAAGGTGCAAGAAATTTTTGACCAGTTATCAGGTCCTGTTGTTTTAATCTGTGGGCAGAACAAAGCTGAGTCCGAGTCAAAGGAGAAAGAGAAATTCACGATGATACTACCAAATTTTGGGCGTCTTGCAAAGCTGCCTGTTTCTCTTAAGCGTCTTACCGAGGGACTGAAGGCAACAAAAAGATCTGATGATGATGAAATATATAAGCTCTTCTCAAATGTGTTCTGCATACAGCCCCCAAAGGAAGAAGAGGTACTTCGAACATTCAATAAACAGATCGAAGAGGACGGTAGAATTGTGATGTCAAGGAGCAATTTGAATGAATTACATAAGGTTCTCGAGGAACATGAGCTATCATGCGTGGACCTATTACAAGTAGATACTGATGGTGTGATCTTGACAAAGCGAAAAGCTGAGAAAGTAGTTGGCTGGGCTAAAAGCCATTACTTGTCATCTTGTCTTGTTCCTTCCATTAAAGGTGACAGACTGCAGCTGCCTCGTGAAAGCCTTGAAGTAGCAATTTCACGTTTGAAGGAGCAAGAAAATTTGTCTCGGAAACCCTCTCAAAATTTGAAGAACCTTGCGAAGGATGAATATGAGAGTAACTTTGTTTCGGCAGTTGTACCTCCTGGTGAAATTGGTGTCAGGTTTGACGATGTAGGTGCTCTGGAGGAGGTGAAGAAGGCTTTGAATGAACTAGTCATTCTTCCAATGAGAAGACCAGAGCTTTTCTCTCATGGAAACTTGTTGCGGCCTTGCAAAGGGATATTACTTTTTGGTCCCCCTGGAACTGGGAAGACCCTTCTCGCCAAGGCACTTGCAACAGAAGCTGGGGCAAACTTTATCAGCATTACTGGTTCAACTCTAACATCAAAGTGGTTCGGAGATGCTGAAAAGCTGACCAAAGCTCTCTTCTCTTTTGCCAGCAAGCTTGCTCCCGTCATTATATTTGTTGACGAGGTTGATAGTTTGCTTGGTGCTCGTGGTGGTTCTTTTGAGCATGAGGCAACTAGAAGAATGAGAAATGAGTTCATGGCAGCTTGGGATGGATTGCGATCTAAAGACAGTCAAAGAATACTTATTCTCGGTGCCACAAATCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGCTTACCAAGAAGGATATATGTTGATTTACCAGATGTTGAAAATCGTAAGAAGATTTTGAGTATATTTCTTGCTCAAGAGAATCTAGAACCCGGTTTCCAATTTGAGAAACTCTCAGAGGCAACAGAGGGATACTCTGGCAGTGATTTGAAGAACCTCTGTATTGCTGCTGCATATAGGCCTGTCCAGGAACTATTAGAAGAAGAAACCAAGGACAGCAAAGGTGATTTATCTGCAGCTTTAAGGCCACTTAACTTGGATGACTTTATTCAATCAAAAGCCAAGGTTGGGCCATCTGTGTCATATGATGCTGCAAGTATGAACGAGCTTAGGAAATGGAATGAGCAATACGGTGAAGGCGGAAGCAGAAGAAAATCACCATTTGGTTTTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1028

Amino Acids

115.35

Weight (kDa)

5.84

Isoelectric Point (pI)

51.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7751 PF24933 638 - 695 6e-07 Domain of unknown function (DUF7751)
AAA PF00004 776 - 906 8.8e-37 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 930 - 967 1.4e-10 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2648
AccB7I CCANNNNNTGG 1 cut(s) 1676
AccBSI CCGCTC 1 cut(s) 1278
AccI GTMKAC 1 cut(s) 1217
AccII CGCG 2 cut(s) 605, 1152
AciI CCGC 6 cut(s) 103, 605, 669, 1278, 2311, 3051
AclWI GGATC 1 cut(s) 1178
AcoI YGGCCR 1 cut(s) 2660
AcsI RAATTY 5 cut(s) 1572, 1652, 1672, 2104, 2128
AcuI CTGAAG 6 cut(s) 32, 244, 668, 993, 1130, 1748
AcyI GRCGYC 1 cut(s) 1681
AfaI GTAC 3 cut(s) 853, 1815, 2184
AfiI CCNNNNNNNGG 7 cut(s) 1459, 1676, 2146, 2321, 2351, 2658, 2979
AflII CTTAAG 1 cut(s) 1706
AflIII ACRYGT 2 cut(s) 230, 1150
AhlI ACTAGT 2 cut(s) 908, 2257
AjnI CCWGG 5 cut(s) 694, 1318, 2188, 2344, 2877
AjuI GAANNNNNNNTTGG 2 cut(s) 2456, 2488
AloI GAACNNNNNNTCC 2 cut(s) 2772, 2804
Alw21I GWGCWC 3 cut(s) 694, 2227, 2542
Alw26I GTCTC 2 cut(s) 545, 2115
AlwI GGATC 1 cut(s) 1178
AlwNI CAGNNNCTG 4 cut(s) 701, 1067, 1595, 2390
Ama87I CYCGRG 1 cut(s) 1898
ApoI RAATTY 5 cut(s) 1572, 1652, 1672, 2104, 2128
AspLEI GCGC 1 cut(s) 605
AspS9I GGNCC 8 cut(s) 100, 1139, 1202, 1450, 1592, 1924, 2339, 2981
AsuC2I CCSGG 2 cut(s) 361, 2784
AsuII TTCGAA 1 cut(s) 1819
AvaI CYCGRG 1 cut(s) 1898
AvaII GGWCC 4 cut(s) 1202, 1592, 1924, 2339
BanI GGYRCC 1 cut(s) 2648
BanII GRGCYC 1 cut(s) 733
BarI GAAGNNNNNNTAC 2 cut(s) 1797, 1829
BauI CACGAG 4 cut(s) 738, 761, 2058, 2541
BbsI GAAGAC 4 cut(s) 906, 1359, 2284, 2363
Bbv12I GWGCWC 3 cut(s) 694, 2227, 2542
BceAI ACGGC 1 cut(s) 138
BcgI CGANNNNNNTGC 4 cut(s) 2039, 2073, 2204, 2238
BciT130I CCWGG 5 cut(s) 696, 1320, 2190, 2346, 2879
BciVI GTATCC 2 cut(s) 1377, 2816
BclI TGATCA 1 cut(s) 1003
BcnI CCSGG 2 cut(s) 361, 2784
BcoDI GTCTC 2 cut(s) 545, 2115
BcuI ACTAGT 2 cut(s) 908, 2257
BfaI CTAG 8 cut(s) 138, 734, 888, 909, 1521, 2258, 2571, 2777
BfmI CTRYAG 2 cut(s) 2048, 2925
BfrI CTTAAG 1 cut(s) 1706
BfuI GTATCC 2 cut(s) 1377, 2816
BglII AGATCT 2 cut(s) 742, 1742
Bme1390I CCNGG 7 cut(s) 361, 696, 1320, 2190, 2346, 2784, 2879
Bme18I GGWCC 4 cut(s) 1202, 1592, 1924, 2339
BmeT110I CYCGRG 1 cut(s) 1898
BmgT120I GGNCC 8 cut(s) 100, 1139, 1202, 1450, 1592, 1924, 2339, 2981
BmiI GGNNCC 2 cut(s) 2341, 2650
BmrFI CCNGG 7 cut(s) 361, 696, 1320, 2190, 2346, 2784, 2879
BmrI ACTGGG 1 cut(s) 2361
BmsI GCATC 8 cut(s) 33, 373, 826, 874, 1414, 2437, 2668, 2989
BmuI ACTGGG 1 cut(s) 2361
BpiI GAAGAC 4 cut(s) 906, 1359, 2284, 2363
BplI GAGNNNNNCTC 6 cut(s) 2276, 2308, 2789, 2821, 2810, 2842
BpmI CTGGAG 2 cut(s) 678, 2249
Bpu10I CCTNAGC 1 cut(s) 3020
Bpu14I TTCGAA 1 cut(s) 1819
BpuEI CTTGAG 2 cut(s) 968, 2751
BpuMI CCSGG 2 cut(s) 361, 2784
Bsa29I ATCGAT 1 cut(s) 570
BsaAI YACGTR 2 cut(s) 231, 1457
BsaBI GATNNNNATC 1 cut(s) 2614
BsaHI GRCGYC 1 cut(s) 1681
BsaJI CCNNGG 9 cut(s) 524, 1205, 1228, 1318, 1719, 2344, 2370, 2901, 2973
Bsc4I CCNNNNNNNGG 7 cut(s) 1459, 1676, 2146, 2321, 2351, 2658, 2979
Bse1I ACTGG 7 cut(s) 308, 908, 1373, 1385, 1582, 2356, 2419
Bse3DI GCAATG 2 cut(s) 173, 1449
Bse8I GATNNNNATC 1 cut(s) 2614
BseBI CCWGG 5 cut(s) 696, 1320, 2190, 2346, 2879
BseCI ATCGAT 1 cut(s) 570
BseDI CCNNGG 9 cut(s) 524, 1205, 1228, 1318, 1719, 2344, 2370, 2901, 2973
BseGI GGATG 5 cut(s) 48, 850, 2155, 2611, 2956
BseJI GATNNNNATC 1 cut(s) 2614
BseLI CCNNNNNNNGG 7 cut(s) 1459, 1676, 2146, 2321, 2351, 2658, 2979
BseMI GCAATG 2 cut(s) 173, 1449
BseMII CTCAG 7 cut(s) 693, 1038, 1416, 1433, 1617, 1965, 2820
BseNI ACTGG 7 cut(s) 308, 908, 1373, 1385, 1582, 2356, 2419
BseRI GAGGAG 2 cut(s) 1355, 2246
BseYI CCCAGC 2 cut(s) 1989, 2390
BsgI GTGCAG 1 cut(s) 46
Bsh1236I CGCG 2 cut(s) 605, 1152
BshNI GGYRCC 1 cut(s) 2648
BshVI ATCGAT 1 cut(s) 570
BsiHKAI GWGCWC 3 cut(s) 694, 2227, 2542
BsiHKCI CYCGRG 1 cut(s) 1898
BsiSI CCGG 2 cut(s) 360, 2784
BslFI GGGAC 3 cut(s) 141, 1737, 2325
BslI CCNNNNNNNGG 7 cut(s) 1459, 1676, 2146, 2321, 2351, 2658, 2979
BsmAI GTCTC 2 cut(s) 545, 2115
BsmFI GGGAC 3 cut(s) 141, 1737, 2325
BsmI GAATGC 1 cut(s) 605
BsoBI CYCGRG 1 cut(s) 1898
Bsp119I TTCGAA 1 cut(s) 1819
Bsp1286I GDGCHC 4 cut(s) 694, 733, 2227, 2542
Bsp19I CCATGG 1 cut(s) 524
BspACI CCGC 6 cut(s) 103, 605, 669, 1278, 2311, 3051
BspCNI CTCAG 7 cut(s) 694, 1039, 1417, 1432, 1618, 1966, 2819
BspDI ATCGAT 1 cut(s) 570
BspFNI CGCG 2 cut(s) 605, 1152
BspLI GGNNCC 2 cut(s) 2341, 2650
BspMAI CTGCAG 2 cut(s) 2052, 2929
BspPI GGATC 1 cut(s) 1178
BspQI GCTCTTC 1 cut(s) 1775
BspT104I TTCGAA 1 cut(s) 1819
BspT107I GGYRCC 1 cut(s) 2648
BspTI CTTAAG 1 cut(s) 1706
BsrBI CCGCTC 1 cut(s) 1278
BsrDI GCAATG 2 cut(s) 173, 1449
BsrI ACTGG 7 cut(s) 308, 908, 1373, 1385, 1582, 2356, 2419
BssECI CCNNGG 9 cut(s) 524, 1205, 1228, 1318, 1719, 2344, 2370, 2901, 2973
BssNAI GTATAC 1 cut(s) 1218
BssNI GRCGYC 1 cut(s) 1681
BssSI CACGAG 4 cut(s) 738, 761, 2058, 2541
BssT1I CCWWGG 5 cut(s) 524, 1205, 2370, 2901, 2973
Bst1107I GTATAC 1 cut(s) 1218
Bst2BI CACGAG 4 cut(s) 738, 761, 2058, 2541
Bst2UI CCWGG 5 cut(s) 696, 1320, 2190, 2346, 2879
Bst4CI ACNGT 6 cut(s) 112, 541, 713, 1850, 2627, 3044
Bst6I CTCTTC 5 cut(s) 1510, 1775, 1803, 1836, 2477
BstACI GRCGYC 1 cut(s) 1681
BstAFI CTTAAG 1 cut(s) 1706
BstBAI YACGTR 2 cut(s) 231, 1457
BstBI TTCGAA 1 cut(s) 1819
BstC8I GCNNGC 7 cut(s) 963, 1235, 1362, 1470, 2485, 2489, 2493
BstDEI CTNAG 9 cut(s) 324, 702, 1047, 1419, 1425, 1626, 1974, 2806, 3020
BstDSI CCRYGG 2 cut(s) 524, 1228
BstENI CCTNNNNNAGG 3 cut(s) 1457, 2144, 2319
BstF5I GGATG 5 cut(s) 48, 850, 2155, 2611, 2956
BstFNI CGCG 2 cut(s) 605, 1152
BstHHI GCGC 1 cut(s) 605
BstMAI GTCTC 2 cut(s) 545, 2115
BstMWI GCNNNNNNNGC 4 cut(s) 977, 1448, 1474, 2387
BstNI CCWGG 5 cut(s) 696, 1320, 2190, 2346, 2879
BstNSI RCATGY 4 cut(s) 137, 965, 1391, 1472
BstSCI CCNGG 7 cut(s) 359, 694, 1318, 2188, 2344, 2782, 2877
BstSFI CTRYAG 2 cut(s) 2048, 2925
BstUI CGCG 2 cut(s) 605, 1152
BstV2I GAAGAC 4 cut(s) 906, 1359, 2284, 2363
BstX2I RGATCY 2 cut(s) 742, 1742
BstXI CCANNNNNNTGG 1 cut(s) 1380
BstYI RGATCY 2 cut(s) 742, 1742
BstZ17I GTATAC 1 cut(s) 1218
Bsu15I ATCGAT 1 cut(s) 570
BsuI GTATCC 2 cut(s) 1377, 2816
BsuTUI ATCGAT 1 cut(s) 570
BtgI CCRYGG 2 cut(s) 524, 1228
BtgZI GCGATG 1 cut(s) 288
BtsCI GGATG 5 cut(s) 48, 850, 2155, 2611, 2956
BtsI GCAGTG 2 cut(s) 781, 2839
BtsIMutI CAGTG 6 cut(s) 204, 315, 699, 781, 1106, 2839
Cac8I GCNNGC 7 cut(s) 963, 1235, 1362, 1470, 2485, 2489, 2493
CaiI CAGNNNCTG 4 cut(s) 701, 1067, 1595, 2390
CfoI GCGC 1 cut(s) 605
Cfr13I GGNCC 8 cut(s) 100, 1139, 1202, 1450, 1592, 1924, 2339, 2981
ClaI ATCGAT 1 cut(s) 570
CseI GACGC 2 cut(s) 1670, 1700
Csp6I GTAC 3 cut(s) 852, 1814, 2183
CspCI CAANNNNNGTGG 2 cut(s) 2928, 2963
CviQI GTAC 3 cut(s) 852, 1814, 2183
DdeI CTNAG 9 cut(s) 324, 702, 1047, 1419, 1425, 1626, 1974, 2806, 3020
EaeI YGGCCR 1 cut(s) 2660
Eam1104I CTCTTC 5 cut(s) 1510, 1775, 1803, 1836, 2477
EarI CTCTTC 5 cut(s) 1510, 1775, 1803, 1836, 2477
EciI GGCGGA 1 cut(s) 3066
Eco130I CCWWGG 5 cut(s) 524, 1205, 2370, 2901, 2973
Eco147I AGGCCT 2 cut(s) 1237, 2872
Eco24I GRGCYC 1 cut(s) 733
Eco47I GGWCC 4 cut(s) 1202, 1592, 1924, 2339
Eco57I CTGAAG 6 cut(s) 32, 244, 668, 993, 1130, 1748
Eco88I CYCGRG 1 cut(s) 1898
EcoNI CCTNNNNNAGG 3 cut(s) 1457, 2144, 2319
EcoO109I RGGNCCY 2 cut(s) 1450, 1592
EcoRII CCWGG 5 cut(s) 694, 1318, 2188, 2344, 2877
EcoT14I CCWWGG 5 cut(s) 524, 1205, 2370, 2901, 2973
EcoT38I GRGCYC 1 cut(s) 733
ErhI CCWWGG 5 cut(s) 524, 1205, 2370, 2901, 2973
FalI AAGNNNNNCTT 4 cut(s) 172, 204, 1800, 1832
FaqI GGGAC 3 cut(s) 141, 1737, 2325
FauNDI CATATG 1 cut(s) 2995
FbaI TGATCA 1 cut(s) 1003
FblI GTMKAC 1 cut(s) 1217
FokI GGATG 5 cut(s) 55, 857, 2162, 2618, 2963
FriOI GRGCYC 1 cut(s) 733
FspBI CTAG 8 cut(s) 138, 734, 888, 909, 1521, 2258, 2571, 2777
GlaI GCGC 1 cut(s) 604
GsaI CCCAGC 2 cut(s) 1993, 2394
GsuI CTGGAG 2 cut(s) 678, 2249
HapII CCGG 2 cut(s) 360, 2784
HgaI GACGC 2 cut(s) 1670, 1700
HhaI GCGC 1 cut(s) 605
Hin1I GRCGYC 1 cut(s) 1681
Hin6I GCGC 1 cut(s) 603
HinP1I GCGC 1 cut(s) 603
HincII GTYRAC 2 cut(s) 1253, 2515
HindII GTYRAC 2 cut(s) 1253, 2515
HindIII AAGCTT 2 cut(s) 989, 2489
HpaII CCGG 2 cut(s) 360, 2784
Hpy166II GTNNAC 8 cut(s) 171, 299, 633, 1218, 1253, 1378, 1924, 2515
Hpy8I GTNNAC 8 cut(s) 171, 299, 633, 1218, 1253, 1378, 1924, 2515
Hpy99I CGWCG 1 cut(s) 2694
HpyCH4III ACNGT 6 cut(s) 112, 541, 713, 1850, 2627, 3044
HpyCH4IV ACGT 4 cut(s) 78, 230, 1456, 2086
HpyF10VI GCNNNNNNNGC 4 cut(s) 977, 1448, 1474, 2387
HpyF3I CTNAG 9 cut(s) 324, 702, 1047, 1419, 1425, 1626, 1974, 2806, 3020
HpySE526I ACGT 4 cut(s) 78, 230, 1456, 2086
Hsp92I GRCGYC 1 cut(s) 1681
HspAI GCGC 1 cut(s) 603
Ksp22I TGATCA 1 cut(s) 1003
LguI GCTCTTC 1 cut(s) 1775
LmnI GCTCC 5 cut(s) 697, 790, 1869, 2095, 2500
LweI GCATC 8 cut(s) 33, 373, 826, 874, 1414, 2437, 2668, 2989
MaeI CTAG 8 cut(s) 138, 734, 888, 909, 1521, 2258, 2571, 2777
MaeII ACGT 4 cut(s) 78, 230, 1456, 2086
MaeIII GTNAC 4 cut(s) 249, 938, 2039, 2162
MbiI CCGCTC 1 cut(s) 1278
MflI RGATCY 2 cut(s) 742, 1742
MhlI GDGCHC 4 cut(s) 694, 733, 2227, 2542
MluI ACGCGT 1 cut(s) 1150
MlyI GAGTC 7 cut(s) 827, 869, 1058, 1103, 1496, 1637, 1643
MseI TTAA 7 cut(s) 21, 426, 1604, 1707, 2034, 2933, 2943
MslI CAYNNNNRTG 3 cut(s) 132, 570, 2434
MspA1I CMGCKG 3 cut(s) 52, 304, 2053
MspCI CTTAAG 1 cut(s) 1706
MspI CCGG 2 cut(s) 360, 2784
MspR9I CCNGG 7 cut(s) 361, 696, 1320, 2190, 2346, 2784, 2879
Mva1269I GAATGC 1 cut(s) 605
MvaI CCWGG 5 cut(s) 696, 1320, 2190, 2346, 2879
MvnI CGCG 2 cut(s) 605, 1152
MwoI GCNNNNNNNGC 4 cut(s) 977, 1448, 1474, 2387
NciI CCSGG 2 cut(s) 361, 2784
NcoI CCATGG 1 cut(s) 524
NdeI CATATG 1 cut(s) 2995
NlaIV GGNNCC 2 cut(s) 2341, 2650
NmuCI GTSAC 2 cut(s) 938, 2039
NspI RCATGY 4 cut(s) 137, 965, 1391, 1472
NspV TTCGAA 1 cut(s) 1819
PaeI GCATGC 2 cut(s) 965, 1472
PaeR7I CTCGAG 1 cut(s) 1898
PceI AGGCCT 2 cut(s) 1237, 2872
PciSI GCTCTTC 1 cut(s) 1775
PctI GAATGC 1 cut(s) 605
PfeI GAWTC 6 cut(s) 164, 464, 824, 1043, 1366, 2773
PflMI CCANNNNNTGG 1 cut(s) 1676
PfoI TCCNGGA 1 cut(s) 2877
PleI GAGTC 7 cut(s) 826, 868, 1057, 1102, 1496, 1636, 1642
PpsI GAGTC 7 cut(s) 826, 868, 1057, 1102, 1496, 1636, 1642
Ppu21I YACGTR 2 cut(s) 231, 1457
PpuMI RGGWCCY 1 cut(s) 1592
Psp5II RGGWCCY 1 cut(s) 1592
Psp6I CCWGG 5 cut(s) 694, 1318, 2188, 2344, 2877
PspFI CCCAGC 2 cut(s) 1989, 2390
PspGI CCWGG 5 cut(s) 694, 1318, 2188, 2344, 2877
PspN4I GGNNCC 2 cut(s) 2341, 2650
PspPI GGNCC 8 cut(s) 100, 1139, 1202, 1450, 1592, 1924, 2339, 2981
PspPPI RGGWCCY 1 cut(s) 1592
PstI CTGCAG 2 cut(s) 2052, 2929
PstNI CAGNNNCTG 4 cut(s) 701, 1067, 1595, 2390
PsuI RGATCY 2 cut(s) 742, 1742
PvuII CAGCTG 3 cut(s) 52, 304, 2053
RsaI GTAC 3 cut(s) 853, 1815, 2184
RsaNI GTAC 3 cut(s) 852, 1814, 2183
RseI CAYNNNNRTG 3 cut(s) 132, 570, 2434
SapI GCTCTTC 1 cut(s) 1775
SaqAI TTAA 7 cut(s) 21, 426, 1604, 1707, 2034, 2933, 2943
Sau96I GGNCC 8 cut(s) 100, 1139, 1202, 1450, 1592, 1924, 2339, 2981
SchI GAGTC 7 cut(s) 827, 869, 1058, 1103, 1496, 1637, 1643
ScrFI CCNGG 7 cut(s) 361, 696, 1320, 2190, 2346, 2784, 2879
SduI GDGCHC 4 cut(s) 694, 733, 2227, 2542
SfaNI GCATC 8 cut(s) 33, 373, 826, 874, 1414, 2437, 2668, 2989
SfcI CTRYAG 2 cut(s) 2048, 2925
Sfr274I CTCGAG 1 cut(s) 1898
SfuI TTCGAA 1 cut(s) 1819
SinI GGWCC 4 cut(s) 1202, 1592, 1924, 2339
SlaI CTCGAG 1 cut(s) 1898
SmiMI CAYNNNNRTG 3 cut(s) 132, 570, 2434
SmlI CTYRAG 4 cut(s) 983, 1706, 1898, 2766
SmoI CTYRAG 4 cut(s) 983, 1706, 1898, 2766
SpeI ACTAGT 2 cut(s) 908, 2257
SphI GCATGC 2 cut(s) 965, 1472
SseBI AGGCCT 2 cut(s) 1237, 2872
SsiI CCGC 6 cut(s) 103, 605, 669, 1278, 2311, 3051
SspMI CTAG 8 cut(s) 138, 734, 888, 909, 1521, 2258, 2571, 2777
StuI AGGCCT 2 cut(s) 1237, 2872
StyD4I CCNGG 7 cut(s) 359, 694, 1318, 2188, 2344, 2782, 2877
StyI CCWWGG 5 cut(s) 524, 1205, 2370, 2901, 2973
TaaI ACNGT 6 cut(s) 112, 541, 713, 1850, 2627, 3044
TaiI ACGT 4 cut(s) 81, 233, 1459, 2089
TaqI TCGA 5 cut(s) 570, 1285, 1819, 1839, 1899
TauI GCSGC 4 cut(s) 105, 608, 672, 2314
TfiI GAWTC 6 cut(s) 164, 464, 824, 1043, 1366, 2773
Tru1I TTAA 7 cut(s) 21, 426, 1604, 1707, 2034, 2933, 2943
Tru9I TTAA 7 cut(s) 21, 426, 1604, 1707, 2034, 2933, 2943
TscAI CASTG 6 cut(s) 211, 315, 706, 781, 1113, 2839
TseFI GTSAC 2 cut(s) 938, 2039
Tsp45I GTSAC 2 cut(s) 938, 2039
TspGWI ACGGA 1 cut(s) 1217
TspRI CASTG 6 cut(s) 211, 315, 706, 781, 1113, 2839
Van91I CCANNNNNTGG 1 cut(s) 1676
Vha464I CTTAAG 1 cut(s) 1706
VpaK11BI GGWCC 4 cut(s) 1202, 1592, 1924, 2339
XagI CCTNNNNNAGG 3 cut(s) 1457, 2144, 2319
XapI RAATTY 5 cut(s) 1572, 1652, 1672, 2104, 2128
XbaI TCTAGA 1 cut(s) 2776
XceI RCATGY 4 cut(s) 137, 965, 1391, 1472
XcmI CCANNNNNNNNNTGG 1 cut(s) 1377
XhoI CTCGAG 1 cut(s) 1898
XmiI GTMKAC 1 cut(s) 1217
XspI CTAG 8 cut(s) 138, 734, 888, 909, 1521, 2258, 2571, 2777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.