Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000144.1

Orthogroup ID

OG0004154

Physical Location & Seq

Genomic Coordinates Reverse (-)

5147 .. 15109

Gene Structure 9963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000144.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2973 bp

atgcttcaactgtccaattctataaagccaagctacgttcatcatggttcttctcaatcgttgggacgtattacagttcctgcaaactactactcagatgctagttttattagaagccgtctcatagattcgttctcattgcgaagtggtgtatctgctaatagttgcactggtttgcaagtgaggtctaatacgtgtttgaagggtagtcagttacgcttctacagctcagaaggcgatggaagtaatgcaaatgagggtaaacagttaccagtgaaagactttgataaagaaaagacttggcaagaaaaggctaggaaagatgttaggccttctgatgcacacgctctacttggggagcaagatcaaacggaatggcttaatagtcacaaacttaccattgagagtaaaaagaaagaatcaccttttttgactagacgagagaagttcaaaaatgagtttctatggagggttgttccatgggagaagataactgtttcatgggagacgtttccttactatatcgatgaacccaccaaaaatcttttgatggaatgtgctgctgctcatttgaaacacaaaaagttcacttctacttatggttctcgtttgacatcttcaagcgggagaatactgcttcagagtgctccaggcactgagctttaccgtgaaagattagttagagctcttgcgcaagatcttcaagttccactactcgtgcttgacagcagtgttcttgctccttatgattttggtgatgattgtcaaacggagtctgaatcagaggatgatggtgtggaggagtgtacttcagagtcagagattgatgatgagaatgatgcgagtaatgaagaagaatggactagtagtaatgaggcaaagtcagattgtagtgataaagatgaagttgatgtgcatgcaaaggctgaagcagccctcaagaagcttgttcctcttgaacaattttctaagatggtatctggggaaattaatgttgaatctgagccctcaaagtcagaagctgctgagcctaccgataaatccaaagaatccaaacgaccactgaagaaaggtgatcgggtgaagtatattgggcctactttacgtgttgaagctgataacaggcctttaccgaatggtcaacgtggggaggtatatgaggtgagcggagatcgaattgctgttatattggatataaatgacgacacaggaagtgatgtggataaagaggagaaaggagaagaccagcctgcaaacccaccagtttattggatacatgcaaatcatgtcgagcatgttgatgagactcagactgaggattgttatattgcaatggaggccctacgtgaggtattgcatgccaatcaacctcttattgtctattttccagactcatctcaatggttgtctagggcagttcccaagtcaaacaggaaggactttgtcaataaggtgcaagaaatttttgaccagttatcaggtcctgttgttttaatctgtggacagaacaaaactgaatccgagtcaaaggagaaagagaaatttacgatgatactaccaaattttggtcgtcttgcaaagctgcctgtttctcttaagcgtcttactgagggacttaaggcaacaaagcgatctgatgaggatgaaatatataagctcttctcaaatgtgttctgcatacatcccccaaaggaagaagaggtacttcggacattcaataaacagattgaagaagatgggagaattgtgatgtcaaggagcaatttgaatgaattacataaggttctcgaggaacatgagctatcatgcatggacctattgcaagtagatactgatggtgtgatcttgacaaagcgaaaagctgagaaagtagttggctgggctaaaagccattacttatcatcttgtcttgttccttccgttaaaggtgacagactgcagcttcctcgtgaaagccttgaagtagcaatttcacgtttgaaggagcaagaaagtttgtctcggaaaccctctcaaaatttgaagaaccttgcgaaggatgaatatgagagtaactttgtttcagcggttgtacctcctggtgaaattggtgtcaggtttgatgatgtaggtgctctggaggaggtgaagaaggctttgaatgaactagtcattcttccaatgagaagaccagagcttttctctcgtggaaacttgttgcggccttgcaaagggatattactttttggtcctcctggaactgggaagacccttcttgcgaaggcacttgcaacagaagctggggcaaactttatcagcattaccggttcaactctaacatcaaagtggtttggagatgctgaaaagctgaccaaagctctcttctcttttgccagcaagcttgctcccgtcattatatttgtcgatgaggttgatagtttgcttggtgctcgtggtggttcttttgagcatgaggcaactagaagaatgagaaatgagttcatggcagcttgggatggattgcggtccaaagacagtcaaagaattcttattctcggagccacaaatcggccatttgaccttgatgatgctgttattcgtcgcttaccaagaaggatatatgttgatttaccagatgttgaaaatcgcaagaagattttgagtatctttcttgctcaagagaatctagaacctggtttccaatttgataaactttcagaggcaaccgagggatactctggcagtgatttgaagaacctctgtattgctgctgcatatagacctgtccaggaactattagaagaagaaaccaaggacagcaaaagtgatttatctccacctttaaggccacttgatttggatgactttattcaatcaaaagccaaggttgggccatctgtgtcatatgatgctgcaagcatgaacgagcttaggaaatggaatgagcaatacggtgaaggcggaagcaggagaaaatcaccatttggtttttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

990

Amino Acids

111.22

Weight (kDa)

5.4

Isoelectric Point (pI)

53.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50140 AT1G50140 AT1G50140 AT1G50140 AT1G50140 AT3G19740
fragaria_vesca	FvH4_4g36860 FvH4_4g36860 FvH4_4g36860
malus_domestica	MD13G1006500.v1.1 MD16G1001500.v1.1
prunus_persica	Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1
pyrus_communis	pycom13g00540 pycom16g00410
rosa_chinensis	RchiOBHm_Chr4g0446611
rosa_laevigata	RLG00000005645
rosa_multiflora	Rmu_sc0036387.1_g000001 Rmu_ssc0000144.1_g000003
rosa_roxburghii	Rroxscaffold_5G00387010
rosa_rugosa	Rorug04G0372800 Rorug04G0372900 Rorug04G0373000 Rorug04G0373100
rosa_samantha	Rh4AG434400 Rh4BG443600 Rh4CG460900 Rh4DG442400
rosa_wichuraiana	Rw4G037140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	693
AccB7I	CCANNNNNTGG	1 cut(s)	1565
AccBSI	CCGCTC	1 cut(s)	1167
AciI	CCGC	6 cut(s)	624, 1167, 2066, 2200, 2503, 2940
AcoI	YGGCCR	1 cut(s)	2549
AcsI	RAATTY	5 cut(s)	1461, 1541, 1561, 2017, 2523
AcuI	CTGAAG	4 cut(s)	623, 795, 948, 1085
AfaI	GTAC	3 cut(s)	808, 1704, 2073
AfiI	CCNNNNNNNGG	7 cut(s)	1348, 1565, 2035, 2210, 2240, 2547, 2868
AflII	CTTAAG	2 cut(s)	1595, 1616
AflIII	ACRYGT	2 cut(s)	194, 1105
AgeI	ACCGGT	1 cut(s)	2303
AhlI	ACTAGT	2 cut(s)	863, 2146
AjnI	CCWGG	5 cut(s)	649, 2077, 2233, 2671, 2766
AjuI	GAANNNNNNNTTGG	2 cut(s)	2345, 2377
AloI	GAACNNNNNNTCC	2 cut(s)	2661, 2693
Alw21I	GWGCWC	4 cut(s)	649, 688, 2116, 2431
Alw26I	GTCTC	4 cut(s)	125, 500, 1298, 2004
AlwNI	CAGNNNCTG	5 cut(s)	80, 656, 1022, 1484, 2279
Ama87I	CYCGRG	1 cut(s)	1787
AoxI	GGCC	8 cut(s)	329, 1094, 1124, 1338, 2201, 2549, 2825, 2870
ApoI	RAATTY	5 cut(s)	1461, 1541, 1561, 2017, 2523
AseI	ATTAAT	1 cut(s)	990
AsiGI	ACCGGT	1 cut(s)	2303
AspLEI	GCGC	1 cut(s)	694
AspS9I	GGNCC	7 cut(s)	1094, 1339, 1481, 1813, 2228, 2505, 2870
AvaI	CYCGRG	1 cut(s)	1787
AvaII	GGWCC	4 cut(s)	1481, 1813, 2228, 2505
BanII	GRGCYC	2 cut(s)	688, 1008
BarI	GAAGNNNNNNTAC	2 cut(s)	1686, 1718
BauI	CACGAG	4 cut(s)	716, 1947, 2184, 2430
BbsI	GAAGAC	3 cut(s)	1248, 2173, 2252
Bbv12I	GWGCWC	4 cut(s)	649, 688, 2116, 2431
BccI	CCATC	8 cut(s)	233, 544, 785, 967, 1730, 1829, 2489, 2881
BceAI	ACGGC	1 cut(s)	102
BcgI	CGANNNNNNTGC	2 cut(s)	1928, 1962
BciT130I	CCWGG	5 cut(s)	651, 2079, 2235, 2673, 2768
BciVI	GTATCC	2 cut(s)	1266, 2705
BcoDI	GTCTC	4 cut(s)	125, 500, 1298, 2004
BcuI	ACTAGT	2 cut(s)	863, 2146
BfaI	CTAG	8 cut(s)	102, 315, 435, 864, 1410, 2147, 2460, 2666
BfmI	CTRYAG	2 cut(s)	223, 1937
BfrI	CTTAAG	2 cut(s)	1595, 1616
BfuI	GTATCC	2 cut(s)	1266, 2705
BglII	AGATCT	1 cut(s)	697
BlpI	GCTNAGC	1 cut(s)	1026
Bme1390I	CCNGG	5 cut(s)	651, 2079, 2235, 2673, 2768
Bme18I	GGWCC	4 cut(s)	1481, 1813, 2228, 2505
BmeT110I	CYCGRG	1 cut(s)	1787
BmgT120I	GGNCC	7 cut(s)	1094, 1339, 1481, 1813, 2228, 2505, 2870
BmiI	GGNNCC	1 cut(s)	2539
BmrFI	CCNGG	5 cut(s)	651, 2079, 2235, 2673, 2768
BmrI	ACTGGG	1 cut(s)	2250
BmsI	GCATC	6 cut(s)	88, 328, 829, 2326, 2557, 2878
BmuI	ACTGGG	1 cut(s)	2250
BpiI	GAAGAC	3 cut(s)	1248, 2173, 2252
BplI	GAGNNNNNCTC	4 cut(s)	2165, 2197, 2699, 2731
BpmI	CTGGAG	2 cut(s)	633, 2138
Bpu10I	CCTNAGC	1 cut(s)	2909
Bpu1102I	GCTNAGC	1 cut(s)	1026
BpuEI	CTTGAG	2 cut(s)	923, 2640
Bsa29I	ATCGAT	1 cut(s)	525
BsaAI	YACGTR	3 cut(s)	195, 1106, 1346
BsaJI	CCNNGG	4 cut(s)	479, 2706, 2790, 2862
BsaWI	WCCGGW	1 cut(s)	2303
Bsc4I	CCNNNNNNNGG	7 cut(s)	1348, 1565, 2035, 2210, 2240, 2547, 2868
Bse118I	RCCGGY	1 cut(s)	2303
Bse1I	ACTGG	5 cut(s)	175, 272, 1262, 1471, 2245
Bse3DI	GCAATG	2 cut(s)	137, 1338
BseBI	CCWGG	5 cut(s)	651, 2079, 2235, 2673, 2768
BseCI	ATCGAT	1 cut(s)	525
BseDI	CCNNGG	4 cut(s)	479, 2706, 2790, 2862
BseGI	GGATG	6 cut(s)	793, 1648, 1681, 2044, 2500, 2845
BseLI	CCNNNNNNNGG	7 cut(s)	1348, 1565, 2035, 2210, 2240, 2547, 2868
BseMI	GCAATG	2 cut(s)	137, 1338
BseMII	CTCAG	9 cut(s)	108, 243, 648, 993, 1017, 1305, 1322, 1599, 1854
BseNI	ACTGG	5 cut(s)	175, 272, 1262, 1471, 2245
BseRI	GAGGAG	3 cut(s)	815, 1244, 2135
BseYI	CCCAGC	2 cut(s)	1878, 2279
BshFI	GGCC	8 cut(s)	331, 1096, 1126, 1340, 2203, 2551, 2827, 2872
BshTI	ACCGGT	1 cut(s)	2303
BshVI	ATCGAT	1 cut(s)	525
BsiHKAI	GWGCWC	4 cut(s)	649, 688, 2116, 2431
BsiHKCI	CYCGRG	1 cut(s)	1787
BsiSI	CCGG	1 cut(s)	2304
BslFI	GGGAC	2 cut(s)	78, 1626
BslI	CCNNNNNNNGG	7 cut(s)	1348, 1565, 2035, 2210, 2240, 2547, 2868
BsmAI	GTCTC	4 cut(s)	125, 500, 1298, 2004
BsmBI	CGTCTC	2 cut(s)	125, 500
BsmFI	GGGAC	2 cut(s)	78, 1626
BsnI	GGCC	8 cut(s)	331, 1096, 1126, 1340, 2203, 2551, 2827, 2872
BsoBI	CYCGRG	1 cut(s)	1787
Bsp1286I	GDGCHC	5 cut(s)	649, 688, 1008, 2116, 2431
Bsp143I	GATC	6 cut(s)	364, 697, 1075, 1171, 1631, 1842
Bsp1720I	GCTNAGC	1 cut(s)	1026
Bsp19I	CCATGG	1 cut(s)	479
BspACI	CCGC	6 cut(s)	624, 1167, 2066, 2200, 2503, 2940
BspANI	GGCC	8 cut(s)	331, 1096, 1126, 1340, 2203, 2551, 2827, 2872
BspCNI	CTCAG	9 cut(s)	107, 242, 649, 994, 1018, 1306, 1321, 1600, 1855
BspDI	ATCGAT	1 cut(s)	525
BspLI	GGNNCC	1 cut(s)	2539
BspMAI	CTGCAG	1 cut(s)	1941
BspQI	GCTCTTC	1 cut(s)	1664
BspTI	CTTAAG	2 cut(s)	1595, 1616
BsrBI	CCGCTC	1 cut(s)	1167
BsrDI	GCAATG	2 cut(s)	137, 1338
BsrFI	RCCGGY	1 cut(s)	2303
BsrI	ACTGG	5 cut(s)	175, 272, 1262, 1471, 2245
BssAI	RCCGGY	1 cut(s)	2303
BssECI	CCNNGG	4 cut(s)	479, 2706, 2790, 2862
BssMI	GATC	6 cut(s)	364, 697, 1075, 1171, 1631, 1842
BssSI	CACGAG	4 cut(s)	716, 1947, 2184, 2430
BssT1I	CCWWGG	3 cut(s)	479, 2790, 2862
Bst2BI	CACGAG	4 cut(s)	716, 1947, 2184, 2430
Bst2UI	CCWGG	5 cut(s)	651, 2079, 2235, 2673, 2768
Bst4CI	ACNGT	7 cut(s)	12, 76, 267, 496, 668, 2516, 2933
Bst6I	CTCTTC	3 cut(s)	1664, 1692, 2366
BstAFI	CTTAAG	2 cut(s)	1595, 1616
BstBAI	YACGTR	3 cut(s)	195, 1106, 1346
BstC8I	GCNNGC	7 cut(s)	918, 1251, 1359, 2374, 2378, 2382, 2896
BstDSI	CCRYGG	1 cut(s)	479
BstENI	CCTNNNNNAGG	3 cut(s)	1346, 2033, 2208
BstF5I	GGATG	6 cut(s)	793, 1648, 1681, 2044, 2500, 2845
BstHHI	GCGC	1 cut(s)	694
BstKTI	GATC	6 cut(s)	367, 700, 1078, 1174, 1634, 1845
BstMAI	GTCTC	4 cut(s)	125, 500, 1298, 2004
BstMBI	GATC	6 cut(s)	364, 697, 1075, 1171, 1631, 1842
BstMWI	GCNNNNNNNGC	5 cut(s)	225, 234, 932, 1337, 2276
BstNI	CCWGG	5 cut(s)	651, 2079, 2235, 2673, 2768
BstNSI	RCATGY	4 cut(s)	920, 1280, 1298, 1361
BstSCI	CCNGG	5 cut(s)	649, 2077, 2233, 2671, 2766
BstSFI	CTRYAG	2 cut(s)	223, 1937
BstV2I	GAAGAC	3 cut(s)	1248, 2173, 2252
BstX2I	RGATCY	1 cut(s)	697
BstXI	CCANNNNNNTGG	1 cut(s)	1269
BstYI	RGATCY	1 cut(s)	697
Bsu15I	ATCGAT	1 cut(s)	525
BsuI	GTATCC	2 cut(s)	1266, 2705
BsuRI	GGCC	8 cut(s)	331, 1096, 1126, 1340, 2203, 2551, 2827, 2872
BsuTUI	ATCGAT	1 cut(s)	525
BtgI	CCRYGG	1 cut(s)	479
BtgZI	GCGATG	1 cut(s)	252
BtsCI	GGATG	6 cut(s)	793, 1648, 1681, 2044, 2500, 2845
BtsI	GCAGTG	2 cut(s)	736, 2728
BtsIMutI	CAGTG	6 cut(s)	168, 279, 654, 736, 1061, 2728
Cac8I	GCNNGC	7 cut(s)	918, 1251, 1359, 2374, 2378, 2382, 2896
CaiI	CAGNNNCTG	5 cut(s)	80, 656, 1022, 1484, 2279
CfoI	GCGC	1 cut(s)	694
Cfr10I	RCCGGY	1 cut(s)	2303
Cfr13I	GGNCC	7 cut(s)	1094, 1339, 1481, 1813, 2228, 2505, 2870
ClaI	ATCGAT	1 cut(s)	525
CseI	GACGC	1 cut(s)	1589
CsiI	ACCWGGT	1 cut(s)	2671
Csp6I	GTAC	3 cut(s)	807, 1703, 2072
CspAI	ACCGGT	1 cut(s)	2303
CspCI	CAANNNNNGTGG	2 cut(s)	2817, 2852
CviQI	GTAC	3 cut(s)	807, 1703, 2072
DpnI	GATC	6 cut(s)	366, 699, 1077, 1173, 1633, 1844
DpnII	GATC	6 cut(s)	364, 697, 1075, 1171, 1631, 1842
EaeI	YGGCCR	1 cut(s)	2549
Eam1104I	CTCTTC	3 cut(s)	1664, 1692, 2366
EarI	CTCTTC	3 cut(s)	1664, 1692, 2366
EciI	GGCGGA	1 cut(s)	2955
Ecl136II	GAGCTC	1 cut(s)	686
Eco130I	CCWWGG	3 cut(s)	479, 2790, 2862
Eco147I	AGGCCT	2 cut(s)	331, 1126
Eco24I	GRGCYC	2 cut(s)	688, 1008
Eco47I	GGWCC	4 cut(s)	1481, 1813, 2228, 2505
Eco53kI	GAGCTC	1 cut(s)	686
Eco57I	CTGAAG	4 cut(s)	623, 795, 948, 1085
Eco88I	CYCGRG	1 cut(s)	1787
EcoICRI	GAGCTC	1 cut(s)	686
EcoNI	CCTNNNNNAGG	3 cut(s)	1346, 2033, 2208
EcoO109I	RGGNCCY	2 cut(s)	1339, 1481
EcoRI	GAATTC	1 cut(s)	2523
EcoRII	CCWGG	5 cut(s)	649, 2077, 2233, 2671, 2766
EcoT14I	CCWWGG	3 cut(s)	479, 2790, 2862
EcoT22I	ATGCAT	1 cut(s)	1811
EcoT38I	GRGCYC	2 cut(s)	688, 1008
ErhI	CCWWGG	3 cut(s)	479, 2790, 2862
Esp3I	CGTCTC	2 cut(s)	125, 500
FalI	AAGNNNNNCTT	2 cut(s)	1689, 1721
FaqI	GGGAC	2 cut(s)	78, 1626
FauI	CCCGC	1 cut(s)	617
FauNDI	CATATG	1 cut(s)	2884
FokI	GGATG	6 cut(s)	800, 1655, 1668, 2051, 2507, 2852
FriOI	GRGCYC	2 cut(s)	688, 1008
FspBI	CTAG	8 cut(s)	102, 315, 435, 864, 1410, 2147, 2460, 2666
FspI	TGCGCA	1 cut(s)	693
GlaI	GCGC	1 cut(s)	693
GsaI	CCCAGC	2 cut(s)	1882, 2283
GsuI	CTGGAG	2 cut(s)	633, 2138
HaeIII	GGCC	8 cut(s)	331, 1096, 1126, 1340, 2203, 2551, 2827, 2872
HapII	CCGG	1 cut(s)	2304
HgaI	GACGC	1 cut(s)	1589
HhaI	GCGC	1 cut(s)	694
Hin6I	GCGC	1 cut(s)	692
HinP1I	GCGC	1 cut(s)	692
HincII	GTYRAC	1 cut(s)	1142
HindII	GTYRAC	1 cut(s)	1142
HindIII	AAGCTT	2 cut(s)	944, 2378
HpaII	CCGG	1 cut(s)	2304
Hpy166II	GTNNAC	5 cut(s)	263, 588, 807, 1142, 1502
Hpy188III	TCNNGA	9 cut(s)	940, 956, 1388, 1787, 1846, 1949, 2117, 2657, 2666
Hpy8I	GTNNAC	5 cut(s)	263, 588, 807, 1142, 1502
Hpy99I	CGWCG	1 cut(s)	2583
HpyCH4III	ACNGT	7 cut(s)	12, 76, 267, 496, 668, 2516, 2933
HpyCH4IV	ACGT	8 cut(s)	36, 67, 194, 509, 1105, 1144, 1345, 1975
HpyF10VI	GCNNNNNNNGC	5 cut(s)	225, 234, 932, 1337, 2276
HpySE526I	ACGT	8 cut(s)	36, 67, 194, 509, 1105, 1144, 1345, 1975
HspAI	GCGC	1 cut(s)	692
Kzo9I	GATC	6 cut(s)	364, 697, 1075, 1171, 1631, 1842
LguI	GCTCTTC	1 cut(s)	1664
LmnI	GCTCC	7 cut(s)	358, 652, 745, 1758, 1984, 2389, 2537
LweI	GCATC	6 cut(s)	88, 328, 829, 2326, 2557, 2878
MabI	ACCWGGT	1 cut(s)	2671
MaeI	CTAG	8 cut(s)	102, 315, 435, 864, 1410, 2147, 2460, 2666
MaeII	ACGT	8 cut(s)	36, 67, 194, 509, 1105, 1144, 1345, 1975
MaeIII	GTNAC	5 cut(s)	213, 267, 386, 1928, 2051
MalI	GATC	6 cut(s)	366, 699, 1077, 1173, 1633, 1844
MbiI	CCGCTC	1 cut(s)	1167
MboI	GATC	6 cut(s)	364, 697, 1075, 1171, 1631, 1842
MflI	RGATCY	1 cut(s)	697
MhlI	GDGCHC	5 cut(s)	649, 688, 1008, 2116, 2431
MlyI	GAGTC	5 cut(s)	782, 824, 1300, 1385, 1532
Mph1103I	ATGCAT	1 cut(s)	1811
MseI	TTAA	7 cut(s)	381, 990, 1493, 1596, 1617, 1923, 2822
MslI	CAYNNNNRTG	3 cut(s)	1299, 1399, 2323
MspA1I	CMGCKG	1 cut(s)	2066
MspCI	CTTAAG	2 cut(s)	1595, 1616
MspI	CCGG	1 cut(s)	2304
MspR9I	CCNGG	5 cut(s)	651, 2079, 2235, 2673, 2768
MvaI	CCWGG	5 cut(s)	651, 2079, 2235, 2673, 2768
MwoI	GCNNNNNNNGC	5 cut(s)	225, 234, 932, 1337, 2276
NcoI	CCATGG	1 cut(s)	479
NdeI	CATATG	1 cut(s)	2884
NdeII	GATC	6 cut(s)	364, 697, 1075, 1171, 1631, 1842
NlaIV	GGNNCC	1 cut(s)	2539
NmuCI	GTSAC	2 cut(s)	386, 1928
NsbI	TGCGCA	1 cut(s)	693
NsiI	ATGCAT	1 cut(s)	1811
NspI	RCATGY	4 cut(s)	920, 1280, 1298, 1361
PaeI	GCATGC	2 cut(s)	920, 1361
PaeR7I	CTCGAG	1 cut(s)	1787
PceI	AGGCCT	2 cut(s)	331, 1126
PciSI	GCTCTTC	1 cut(s)	1664
PfeI	GAWTC	7 cut(s)	128, 419, 779, 998, 1049, 1517, 2662
PflFI	GACNNNGTC	1 cut(s)	1442
PflMI	CCANNNNNTGG	1 cut(s)	1565
PfoI	TCCNGGA	2 cut(s)	2233, 2766
PinAI	ACCGGT	1 cut(s)	2303
PleI	GAGTC	5 cut(s)	781, 823, 1300, 1385, 1531
PpsI	GAGTC	5 cut(s)	781, 823, 1300, 1385, 1531
Ppu21I	YACGTR	3 cut(s)	195, 1106, 1346
PpuMI	RGGWCCY	1 cut(s)	1481
PshBI	ATTAAT	1 cut(s)	990
Psp124BI	GAGCTC	1 cut(s)	688
Psp5II	RGGWCCY	1 cut(s)	1481
Psp6I	CCWGG	5 cut(s)	649, 2077, 2233, 2671, 2766
PspFI	CCCAGC	2 cut(s)	1878, 2279
PspGI	CCWGG	5 cut(s)	649, 2077, 2233, 2671, 2766
PspN4I	GGNNCC	1 cut(s)	2539
PspPI	GGNCC	7 cut(s)	1094, 1339, 1481, 1813, 2228, 2505, 2870
PspPPI	RGGWCCY	1 cut(s)	1481
PstI	CTGCAG	1 cut(s)	1941
PstNI	CAGNNNCTG	5 cut(s)	80, 656, 1022, 1484, 2279
PsuI	RGATCY	1 cut(s)	697
PsyI	GACNNNGTC	1 cut(s)	1442
RsaI	GTAC	3 cut(s)	808, 1704, 2073
RsaNI	GTAC	3 cut(s)	807, 1703, 2072
RseI	CAYNNNNRTG	3 cut(s)	1299, 1399, 2323
SacI	GAGCTC	1 cut(s)	688
SapI	GCTCTTC	1 cut(s)	1664
SaqAI	TTAA	7 cut(s)	381, 990, 1493, 1596, 1617, 1923, 2822
Sau3AI	GATC	6 cut(s)	364, 697, 1075, 1171, 1631, 1842
Sau96I	GGNCC	7 cut(s)	1094, 1339, 1481, 1813, 2228, 2505, 2870
SchI	GAGTC	5 cut(s)	782, 824, 1300, 1385, 1532
ScrFI	CCNGG	5 cut(s)	651, 2079, 2235, 2673, 2768
SduI	GDGCHC	5 cut(s)	649, 688, 1008, 2116, 2431
SexAI	ACCWGGT	1 cut(s)	2671
SfaNI	GCATC	6 cut(s)	88, 328, 829, 2326, 2557, 2878
SfcI	CTRYAG	2 cut(s)	223, 1937
Sfr274I	CTCGAG	1 cut(s)	1787
SinI	GGWCC	4 cut(s)	1481, 1813, 2228, 2505
SlaI	CTCGAG	1 cut(s)	1787
SmiMI	CAYNNNNRTG	3 cut(s)	1299, 1399, 2323
SmlI	CTYRAG	5 cut(s)	938, 1595, 1616, 1787, 2655
SmoI	CTYRAG	5 cut(s)	938, 1595, 1616, 1787, 2655
SpeI	ACTAGT	2 cut(s)	863, 2146
SphI	GCATGC	2 cut(s)	920, 1361
SseBI	AGGCCT	2 cut(s)	331, 1126
SsiI	CCGC	6 cut(s)	624, 1167, 2066, 2200, 2503, 2940
SspMI	CTAG	8 cut(s)	102, 315, 435, 864, 1410, 2147, 2460, 2666
SstI	GAGCTC	1 cut(s)	688
StuI	AGGCCT	2 cut(s)	331, 1126
StyD4I	CCNGG	5 cut(s)	649, 2077, 2233, 2671, 2766
StyI	CCWWGG	3 cut(s)	479, 2790, 2862
TaaI	ACNGT	7 cut(s)	12, 76, 267, 496, 668, 2516, 2933
TaiI	ACGT	8 cut(s)	39, 70, 197, 512, 1108, 1147, 1348, 1978
TaqI	TCGA	5 cut(s)	525, 1174, 1290, 1788, 2403
TatI	WGTACW	1 cut(s)	806
TauI	GCSGC	1 cut(s)	2203
TfiI	GAWTC	7 cut(s)	128, 419, 779, 998, 1049, 1517, 2662
Tru1I	TTAA	7 cut(s)	381, 990, 1493, 1596, 1617, 1923, 2822
Tru9I	TTAA	7 cut(s)	381, 990, 1493, 1596, 1617, 1923, 2822
TscAI	CASTG	6 cut(s)	175, 279, 661, 736, 1068, 2728
TseFI	GTSAC	2 cut(s)	386, 1928
Tsp45I	GTSAC	2 cut(s)	386, 1928
TspGWI	ACGGA	3 cut(s)	386, 785, 1909
TspRI	CASTG	6 cut(s)	175, 279, 661, 736, 1068, 2728
Tth111I	GACNNNGTC	1 cut(s)	1442
Van91I	CCANNNNNTGG	1 cut(s)	1565
Vha464I	CTTAAG	2 cut(s)	1595, 1616
VpaK11BI	GGWCC	4 cut(s)	1481, 1813, 2228, 2505
VspI	ATTAAT	1 cut(s)	990
XagI	CCTNNNNNAGG	3 cut(s)	1346, 2033, 2208
XapI	RAATTY	5 cut(s)	1461, 1541, 1561, 2017, 2523
XbaI	TCTAGA	1 cut(s)	2665
XceI	RCATGY	4 cut(s)	920, 1280, 1298, 1361
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1266
XhoI	CTCGAG	1 cut(s)	1787
XspI	CTAG	8 cut(s)	102, 315, 435, 864, 1410, 2147, 2460, 2666
Zsp2I	ATGCAT	1 cut(s)	1811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.