Belongs to the AAA ATPase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G50140 AT1G50140 AT1G50140 AT1G50140 AT1G50140 AT3G19740 |
| fragaria_vesca | FvH4_4g36860 FvH4_4g36860 FvH4_4g36860 |
| malus_domestica | MD13G1006500.v1.1 MD16G1001500.v1.1 |
| prunus_persica | Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 |
| pyrus_communis | pycom13g00540 pycom16g00410 |
| rosa_chinensis | RchiOBHm_Chr4g0446611 |
| rosa_laevigata | RLG00000005645 |
| rosa_multiflora | Rmu_sc0036387.1_g000001 Rmu_ssc0000144.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00387010 |
| rosa_rugosa | Rorug04G0372800 Rorug04G0372900 Rorug04G0373000 Rorug04G0373100 |
| rosa_samantha | Rh4AG434400 Rh4BG443600 Rh4CG460900 Rh4DG442400 |
| rosa_wichuraiana | Rw4G037140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1673 |
| AccBSI | CCGCTC | 1 cut(s) | 1275 |
| AccII | CGCG | 1 cut(s) | 736 |
| AciI | CCGC | 4 cut(s) | 666, 1275, 2308, 3048 |
| AclWI | GGATC | 2 cut(s) | 1175, 2607 |
| AcoI | YGGCCR | 1 cut(s) | 2657 |
| AcsI | RAATTY | 5 cut(s) | 1569, 1649, 1669, 2125, 2631 |
| AcuI | CTGAAG | 4 cut(s) | 665, 837, 990, 1127 |
| AfaI | GTAC | 3 cut(s) | 850, 1812, 2181 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1456, 1673, 2143, 2318, 2348, 2655, 2976 |
| AflII | CTTAAG | 2 cut(s) | 1703, 1724 |
| AflIII | ACRYGT | 2 cut(s) | 236, 1147 |
| AgeI | ACCGGT | 1 cut(s) | 2411 |
| AhlI | ACTAGT | 2 cut(s) | 905, 2254 |
| AjnI | CCWGG | 5 cut(s) | 691, 2185, 2341, 2779, 2874 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2453, 2485 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2769, 2801 |
| Alw21I | GWGCWC | 4 cut(s) | 691, 730, 2224, 2539 |
| Alw26I | GTCTC | 4 cut(s) | 167, 542, 1406, 2112 |
| AlwI | GGATC | 2 cut(s) | 1175, 2607 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 122, 698, 1064, 1592, 2387 |
| Ama87I | CYCGRG | 1 cut(s) | 1895 |
| AoxI | GGCC | 8 cut(s) | 371, 1136, 1232, 1446, 2309, 2657, 2933, 2978 |
| ApoI | RAATTY | 5 cut(s) | 1569, 1649, 1669, 2125, 2631 |
| AseI | ATTAAT | 1 cut(s) | 1032 |
| AsiGI | ACCGGT | 1 cut(s) | 2411 |
| AspLEI | GCGC | 1 cut(s) | 736 |
| AspS9I | GGNCC | 7 cut(s) | 1136, 1199, 1447, 1589, 1921, 2336, 2978 |
| AvaI | CYCGRG | 1 cut(s) | 1895 |
| AvaII | GGWCC | 4 cut(s) | 1199, 1589, 1921, 2336 |
| BanII | GRGCYC | 2 cut(s) | 730, 1050 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1794, 1826 |
| BauI | CACGAG | 4 cut(s) | 758, 2055, 2292, 2538 |
| BbsI | GAAGAC | 3 cut(s) | 1356, 2281, 2360 |
| Bbv12I | GWGCWC | 4 cut(s) | 691, 730, 2224, 2539 |
| BceAI | ACGGC | 1 cut(s) | 144 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2036, 2070 |
| BciT130I | CCWGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| BciVI | GTATCC | 2 cut(s) | 1374, 2813 |
| BcoDI | GTCTC | 4 cut(s) | 167, 542, 1406, 2112 |
| BcuI | ACTAGT | 2 cut(s) | 905, 2254 |
| BfaI | CTAG | 9 cut(s) | 12, 144, 357, 477, 906, 1518, 2255, 2568, 2774 |
| BfmI | CTRYAG | 2 cut(s) | 265, 2045 |
| BfrI | CTTAAG | 2 cut(s) | 1703, 1724 |
| BfuI | GTATCC | 2 cut(s) | 1374, 2813 |
| BglII | AGATCT | 1 cut(s) | 739 |
| BlpI | GCTNAGC | 1 cut(s) | 1068 |
| Bme1390I | CCNGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| Bme18I | GGWCC | 4 cut(s) | 1199, 1589, 1921, 2336 |
| BmeT110I | CYCGRG | 1 cut(s) | 1895 |
| BmgT120I | GGNCC | 7 cut(s) | 1136, 1199, 1447, 1589, 1921, 2336, 2978 |
| BmiI | GGNNCC | 1 cut(s) | 2647 |
| BmrFI | CCNGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| BmrI | ACTGGG | 1 cut(s) | 2358 |
| BmsI | GCATC | 6 cut(s) | 33, 370, 871, 2434, 2665, 2986 |
| BmuI | ACTGGG | 1 cut(s) | 2358 |
| BpiI | GAAGAC | 3 cut(s) | 1356, 2281, 2360 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2273, 2305, 2807, 2839 |
| BpmI | CTGGAG | 2 cut(s) | 675, 2246 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3017 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1068 |
| BpuEI | CTTGAG | 2 cut(s) | 965, 2748 |
| Bsa29I | ATCGAT | 1 cut(s) | 567 |
| BsaAI | YACGTR | 3 cut(s) | 237, 1148, 1454 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2611 |
| BsaJI | CCNNGG | 5 cut(s) | 521, 1202, 2814, 2898, 2970 |
| BsaWI | WCCGGW | 1 cut(s) | 2411 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1456, 1673, 2143, 2318, 2348, 2655, 2976 |
| Bse118I | RCCGGY | 1 cut(s) | 2411 |
| Bse1I | ACTGG | 5 cut(s) | 217, 314, 1370, 1579, 2353 |
| Bse3DI | GCAATG | 2 cut(s) | 179, 1446 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2611 |
| BseBI | CCWGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| BseCI | ATCGAT | 1 cut(s) | 567 |
| BseDI | CCNNGG | 5 cut(s) | 521, 1202, 2814, 2898, 2970 |
| BseGI | GGATG | 6 cut(s) | 48, 835, 1756, 1789, 2152, 2608 |
| BseJI | GATNNNNATC | 1 cut(s) | 2611 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1456, 1673, 2143, 2318, 2348, 2655, 2976 |
| BseMI | GCAATG | 2 cut(s) | 179, 1446 |
| BseMII | CTCAG | 9 cut(s) | 150, 285, 690, 1035, 1059, 1413, 1430, 1707, 1962 |
| BseNI | ACTGG | 5 cut(s) | 217, 314, 1370, 1579, 2353 |
| BseRI | GAGGAG | 3 cut(s) | 857, 1352, 2243 |
| BseYI | CCCAGC | 2 cut(s) | 1986, 2387 |
| BsgI | GTGCAG | 1 cut(s) | 46 |
| Bsh1236I | CGCG | 1 cut(s) | 736 |
| BshFI | GGCC | 8 cut(s) | 373, 1138, 1234, 1448, 2311, 2659, 2935, 2980 |
| BshTI | ACCGGT | 1 cut(s) | 2411 |
| BshVI | ATCGAT | 1 cut(s) | 567 |
| BsiHKAI | GWGCWC | 4 cut(s) | 691, 730, 2224, 2539 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1895 |
| BsiSI | CCGG | 1 cut(s) | 2412 |
| BslFI | GGGAC | 2 cut(s) | 120, 1734 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1456, 1673, 2143, 2318, 2348, 2655, 2976 |
| BsmAI | GTCTC | 4 cut(s) | 167, 542, 1406, 2112 |
| BsmBI | CGTCTC | 2 cut(s) | 167, 542 |
| BsmFI | GGGAC | 2 cut(s) | 120, 1734 |
| BsnI | GGCC | 8 cut(s) | 373, 1138, 1234, 1448, 2311, 2659, 2935, 2980 |
| BsoBI | CYCGRG | 1 cut(s) | 1895 |
| Bsp1286I | GDGCHC | 5 cut(s) | 691, 730, 1050, 2224, 2539 |
| Bsp143I | GATC | 8 cut(s) | 406, 739, 1117, 1167, 1279, 1739, 1950, 2612 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1068 |
| Bsp19I | CCATGG | 1 cut(s) | 521 |
| BspACI | CCGC | 4 cut(s) | 666, 1275, 2308, 3048 |
| BspANI | GGCC | 8 cut(s) | 373, 1138, 1234, 1448, 2311, 2659, 2935, 2980 |
| BspCNI | CTCAG | 9 cut(s) | 149, 284, 691, 1036, 1060, 1414, 1429, 1708, 1963 |
| BspDI | ATCGAT | 1 cut(s) | 567 |
| BspFNI | CGCG | 1 cut(s) | 736 |
| BspLI | GGNNCC | 1 cut(s) | 2647 |
| BspMAI | CTGCAG | 1 cut(s) | 2049 |
| BspPI | GGATC | 2 cut(s) | 1175, 2607 |
| BspQI | GCTCTTC | 1 cut(s) | 1772 |
| BspTI | CTTAAG | 2 cut(s) | 1703, 1724 |
| BsrBI | CCGCTC | 1 cut(s) | 1275 |
| BsrDI | GCAATG | 2 cut(s) | 179, 1446 |
| BsrFI | RCCGGY | 1 cut(s) | 2411 |
| BsrI | ACTGG | 5 cut(s) | 217, 314, 1370, 1579, 2353 |
| BssAI | RCCGGY | 1 cut(s) | 2411 |
| BssECI | CCNNGG | 5 cut(s) | 521, 1202, 2814, 2898, 2970 |
| BssMI | GATC | 8 cut(s) | 406, 739, 1117, 1167, 1279, 1739, 1950, 2612 |
| BssSI | CACGAG | 4 cut(s) | 758, 2055, 2292, 2538 |
| BssT1I | CCWWGG | 4 cut(s) | 521, 1202, 2898, 2970 |
| Bst2BI | CACGAG | 4 cut(s) | 758, 2055, 2292, 2538 |
| Bst2UI | CCWGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| Bst4CI | ACNGT | 8 cut(s) | 54, 118, 309, 538, 710, 1219, 2624, 3041 |
| Bst6I | CTCTTC | 4 cut(s) | 1507, 1772, 1800, 2474 |
| BstAFI | CTTAAG | 2 cut(s) | 1703, 1724 |
| BstBAI | YACGTR | 3 cut(s) | 237, 1148, 1454 |
| BstC8I | GCNNGC | 8 cut(s) | 960, 1232, 1359, 1467, 2482, 2486, 2490, 3004 |
| BstDSI | CCRYGG | 1 cut(s) | 521 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1454, 2141, 2316 |
| BstF5I | GGATG | 6 cut(s) | 48, 835, 1756, 1789, 2152, 2608 |
| BstFNI | CGCG | 1 cut(s) | 736 |
| BstHHI | GCGC | 1 cut(s) | 736 |
| BstKTI | GATC | 8 cut(s) | 409, 742, 1120, 1170, 1282, 1742, 1953, 2615 |
| BstMAI | GTCTC | 4 cut(s) | 167, 542, 1406, 2112 |
| BstMBI | GATC | 8 cut(s) | 406, 739, 1117, 1167, 1279, 1739, 1950, 2612 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 267, 276, 974, 1445, 2384 |
| BstNI | CCWGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| BstNSI | RCATGY | 5 cut(s) | 389, 962, 1388, 1406, 1469 |
| BstSCI | CCNGG | 5 cut(s) | 691, 2185, 2341, 2779, 2874 |
| BstSFI | CTRYAG | 2 cut(s) | 265, 2045 |
| BstUI | CGCG | 1 cut(s) | 736 |
| BstV2I | GAAGAC | 3 cut(s) | 1356, 2281, 2360 |
| BstX2I | RGATCY | 1 cut(s) | 739 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1377 |
| BstYI | RGATCY | 1 cut(s) | 739 |
| Bsu15I | ATCGAT | 1 cut(s) | 567 |
| BsuI | GTATCC | 2 cut(s) | 1374, 2813 |
| BsuRI | GGCC | 8 cut(s) | 373, 1138, 1234, 1448, 2311, 2659, 2935, 2980 |
| BsuTUI | ATCGAT | 1 cut(s) | 567 |
| BtgI | CCRYGG | 1 cut(s) | 521 |
| BtgZI | GCGATG | 1 cut(s) | 294 |
| BtsCI | GGATG | 6 cut(s) | 48, 835, 1756, 1789, 2152, 2608 |
| BtsI | GCAGTG | 2 cut(s) | 778, 2836 |
| BtsIMutI | CAGTG | 6 cut(s) | 210, 321, 696, 778, 1103, 2836 |
| Cac8I | GCNNGC | 8 cut(s) | 960, 1232, 1359, 1467, 2482, 2486, 2490, 3004 |
| CaiI | CAGNNNCTG | 5 cut(s) | 122, 698, 1064, 1592, 2387 |
| CfoI | GCGC | 1 cut(s) | 736 |
| Cfr10I | RCCGGY | 1 cut(s) | 2411 |
| Cfr13I | GGNCC | 7 cut(s) | 1136, 1199, 1447, 1589, 1921, 2336, 2978 |
| ClaI | ATCGAT | 1 cut(s) | 567 |
| CseI | GACGC | 1 cut(s) | 1697 |
| CsiI | ACCWGGT | 1 cut(s) | 2779 |
| Csp6I | GTAC | 3 cut(s) | 849, 1811, 2180 |
| CspAI | ACCGGT | 1 cut(s) | 2411 |
| CviQI | GTAC | 3 cut(s) | 849, 1811, 2180 |
| DpnI | GATC | 8 cut(s) | 408, 741, 1119, 1169, 1281, 1741, 1952, 2614 |
| DpnII | GATC | 8 cut(s) | 406, 739, 1117, 1167, 1279, 1739, 1950, 2612 |
| EaeI | YGGCCR | 1 cut(s) | 2657 |
| Eam1104I | CTCTTC | 4 cut(s) | 1507, 1772, 1800, 2474 |
| EarI | CTCTTC | 4 cut(s) | 1507, 1772, 1800, 2474 |
| EciI | GGCGGA | 1 cut(s) | 3063 |
| Ecl136II | GAGCTC | 1 cut(s) | 728 |
| Eco130I | CCWWGG | 4 cut(s) | 521, 1202, 2898, 2970 |
| Eco147I | AGGCCT | 2 cut(s) | 373, 1234 |
| Eco24I | GRGCYC | 2 cut(s) | 730, 1050 |
| Eco47I | GGWCC | 4 cut(s) | 1199, 1589, 1921, 2336 |
| Eco53kI | GAGCTC | 1 cut(s) | 728 |
| Eco57I | CTGAAG | 4 cut(s) | 665, 837, 990, 1127 |
| Eco88I | CYCGRG | 1 cut(s) | 1895 |
| EcoICRI | GAGCTC | 1 cut(s) | 728 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1454, 2141, 2316 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1447, 1589 |
| EcoRI | GAATTC | 1 cut(s) | 2631 |
| EcoRII | CCWGG | 5 cut(s) | 691, 2185, 2341, 2779, 2874 |
| EcoT14I | CCWWGG | 4 cut(s) | 521, 1202, 2898, 2970 |
| EcoT22I | ATGCAT | 1 cut(s) | 1919 |
| EcoT38I | GRGCYC | 2 cut(s) | 730, 1050 |
| ErhI | CCWWGG | 4 cut(s) | 521, 1202, 2898, 2970 |
| Esp3I | CGTCTC | 2 cut(s) | 167, 542 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1797, 1829 |
| FaqI | GGGAC | 2 cut(s) | 120, 1734 |
| FauI | CCCGC | 1 cut(s) | 659 |
| FauNDI | CATATG | 1 cut(s) | 2992 |
| FokI | GGATG | 6 cut(s) | 55, 842, 1763, 1776, 2159, 2615 |
| FriOI | GRGCYC | 2 cut(s) | 730, 1050 |
| FspBI | CTAG | 9 cut(s) | 12, 144, 357, 477, 906, 1518, 2255, 2568, 2774 |
| GlaI | GCGC | 1 cut(s) | 735 |
| GsaI | CCCAGC | 2 cut(s) | 1990, 2391 |
| GsuI | CTGGAG | 2 cut(s) | 675, 2246 |
| HaeIII | GGCC | 8 cut(s) | 373, 1138, 1234, 1448, 2311, 2659, 2935, 2980 |
| HapII | CCGG | 1 cut(s) | 2412 |
| HgaI | GACGC | 1 cut(s) | 1697 |
| HhaI | GCGC | 1 cut(s) | 736 |
| Hin6I | GCGC | 1 cut(s) | 734 |
| HinP1I | GCGC | 1 cut(s) | 734 |
| HincII | GTYRAC | 1 cut(s) | 1250 |
| HindII | GTYRAC | 1 cut(s) | 1250 |
| HindIII | AAGCTT | 2 cut(s) | 986, 2486 |
| HpaII | CCGG | 1 cut(s) | 2412 |
| Hpy166II | GTNNAC | 5 cut(s) | 305, 630, 849, 1250, 1610 |
| Hpy188III | TCNNGA | 9 cut(s) | 982, 998, 1496, 1895, 1954, 2057, 2225, 2765, 2774 |
| Hpy8I | GTNNAC | 5 cut(s) | 305, 630, 849, 1250, 1610 |
| Hpy99I | CGWCG | 1 cut(s) | 2691 |
| HpyCH4III | ACNGT | 8 cut(s) | 54, 118, 309, 538, 710, 1219, 2624, 3041 |
| HpyCH4IV | ACGT | 8 cut(s) | 78, 109, 236, 551, 1147, 1252, 1453, 2083 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 267, 276, 974, 1445, 2384 |
| HpySE526I | ACGT | 8 cut(s) | 78, 109, 236, 551, 1147, 1252, 1453, 2083 |
| HspAI | GCGC | 1 cut(s) | 734 |
| Kzo9I | GATC | 8 cut(s) | 406, 739, 1117, 1167, 1279, 1739, 1950, 2612 |
| LguI | GCTCTTC | 1 cut(s) | 1772 |
| LmnI | GCTCC | 7 cut(s) | 400, 694, 787, 1866, 2092, 2497, 2645 |
| LweI | GCATC | 6 cut(s) | 33, 370, 871, 2434, 2665, 2986 |
| MabI | ACCWGGT | 1 cut(s) | 2779 |
| MaeI | CTAG | 9 cut(s) | 12, 144, 357, 477, 906, 1518, 2255, 2568, 2774 |
| MaeII | ACGT | 8 cut(s) | 78, 109, 236, 551, 1147, 1252, 1453, 2083 |
| MaeIII | GTNAC | 5 cut(s) | 255, 309, 428, 2036, 2159 |
| MalI | GATC | 8 cut(s) | 408, 741, 1119, 1169, 1281, 1741, 1952, 2614 |
| MbiI | CCGCTC | 1 cut(s) | 1275 |
| MboI | GATC | 8 cut(s) | 406, 739, 1117, 1167, 1279, 1739, 1950, 2612 |
| MflI | RGATCY | 1 cut(s) | 739 |
| MhlI | GDGCHC | 5 cut(s) | 691, 730, 1050, 2224, 2539 |
| MlyI | GAGTC | 5 cut(s) | 824, 866, 1408, 1493, 1640 |
| Mph1103I | ATGCAT | 1 cut(s) | 1919 |
| MseI | TTAA | 8 cut(s) | 423, 1032, 1601, 1704, 1725, 2031, 2930, 2940 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1407, 2431 |
| MspCI | CTTAAG | 2 cut(s) | 1703, 1724 |
| MspI | CCGG | 1 cut(s) | 2412 |
| MspR9I | CCNGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| MvaI | CCWGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| MvnI | CGCG | 1 cut(s) | 736 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 267, 276, 974, 1445, 2384 |
| NcoI | CCATGG | 1 cut(s) | 521 |
| NdeI | CATATG | 1 cut(s) | 2992 |
| NdeII | GATC | 8 cut(s) | 406, 739, 1117, 1167, 1279, 1739, 1950, 2612 |
| NlaIV | GGNNCC | 1 cut(s) | 2647 |
| NmuCI | GTSAC | 2 cut(s) | 428, 2036 |
| NsiI | ATGCAT | 1 cut(s) | 1919 |
| NspI | RCATGY | 5 cut(s) | 389, 962, 1388, 1406, 1469 |
| PaeI | GCATGC | 2 cut(s) | 962, 1469 |
| PaeR7I | CTCGAG | 1 cut(s) | 1895 |
| PceI | AGGCCT | 2 cut(s) | 373, 1234 |
| PciSI | GCTCTTC | 1 cut(s) | 1772 |
| PfeI | GAWTC | 8 cut(s) | 140, 170, 461, 821, 1040, 1091, 1625, 2770 |
| PflFI | GACNNNGTC | 1 cut(s) | 1550 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1673 |
| PfoI | TCCNGGA | 2 cut(s) | 2341, 2874 |
| PinAI | ACCGGT | 1 cut(s) | 2411 |
| PleI | GAGTC | 5 cut(s) | 823, 865, 1408, 1493, 1639 |
| PpsI | GAGTC | 5 cut(s) | 823, 865, 1408, 1493, 1639 |
| Ppu21I | YACGTR | 3 cut(s) | 237, 1148, 1454 |
| PpuMI | RGGWCCY | 1 cut(s) | 1589 |
| PshBI | ATTAAT | 1 cut(s) | 1032 |
| Psp124BI | GAGCTC | 1 cut(s) | 730 |
| Psp5II | RGGWCCY | 1 cut(s) | 1589 |
| Psp6I | CCWGG | 5 cut(s) | 691, 2185, 2341, 2779, 2874 |
| PspFI | CCCAGC | 2 cut(s) | 1986, 2387 |
| PspGI | CCWGG | 5 cut(s) | 691, 2185, 2341, 2779, 2874 |
| PspN4I | GGNNCC | 1 cut(s) | 2647 |
| PspPI | GGNCC | 7 cut(s) | 1136, 1199, 1447, 1589, 1921, 2336, 2978 |
| PspPPI | RGGWCCY | 1 cut(s) | 1589 |
| PstI | CTGCAG | 1 cut(s) | 2049 |
| PstNI | CAGNNNCTG | 5 cut(s) | 122, 698, 1064, 1592, 2387 |
| PsuI | RGATCY | 1 cut(s) | 739 |
| PsyI | GACNNNGTC | 1 cut(s) | 1550 |
| RsaI | GTAC | 3 cut(s) | 850, 1812, 2181 |
| RsaNI | GTAC | 3 cut(s) | 849, 1811, 2180 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1407, 2431 |
| SacI | GAGCTC | 1 cut(s) | 730 |
| SapI | GCTCTTC | 1 cut(s) | 1772 |
| SaqAI | TTAA | 8 cut(s) | 423, 1032, 1601, 1704, 1725, 2031, 2930, 2940 |
| Sau3AI | GATC | 8 cut(s) | 406, 739, 1117, 1167, 1279, 1739, 1950, 2612 |
| Sau96I | GGNCC | 7 cut(s) | 1136, 1199, 1447, 1589, 1921, 2336, 2978 |
| SchI | GAGTC | 5 cut(s) | 824, 866, 1408, 1493, 1640 |
| ScrFI | CCNGG | 5 cut(s) | 693, 2187, 2343, 2781, 2876 |
| SduI | GDGCHC | 5 cut(s) | 691, 730, 1050, 2224, 2539 |
| SexAI | ACCWGGT | 1 cut(s) | 2779 |
| SfaNI | GCATC | 6 cut(s) | 33, 370, 871, 2434, 2665, 2986 |
| SfcI | CTRYAG | 2 cut(s) | 265, 2045 |
| Sfr274I | CTCGAG | 1 cut(s) | 1895 |
| SinI | GGWCC | 4 cut(s) | 1199, 1589, 1921, 2336 |
| SlaI | CTCGAG | 1 cut(s) | 1895 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1407, 2431 |
| SmlI | CTYRAG | 5 cut(s) | 980, 1703, 1724, 1895, 2763 |
| SmoI | CTYRAG | 5 cut(s) | 980, 1703, 1724, 1895, 2763 |
| SpeI | ACTAGT | 2 cut(s) | 905, 2254 |
| SphI | GCATGC | 2 cut(s) | 962, 1469 |
| SseBI | AGGCCT | 2 cut(s) | 373, 1234 |
| SsiI | CCGC | 4 cut(s) | 666, 1275, 2308, 3048 |
| SspMI | CTAG | 9 cut(s) | 12, 144, 357, 477, 906, 1518, 2255, 2568, 2774 |
| SstI | GAGCTC | 1 cut(s) | 730 |
| StuI | AGGCCT | 2 cut(s) | 373, 1234 |
| StyD4I | CCNGG | 5 cut(s) | 691, 2185, 2341, 2779, 2874 |
| StyI | CCWWGG | 4 cut(s) | 521, 1202, 2898, 2970 |
| TaaI | ACNGT | 8 cut(s) | 54, 118, 309, 538, 710, 1219, 2624, 3041 |
| TaiI | ACGT | 8 cut(s) | 81, 112, 239, 554, 1150, 1255, 1456, 2086 |
| TaqI | TCGA | 5 cut(s) | 567, 1282, 1398, 1896, 2511 |
| TatI | WGTACW | 1 cut(s) | 848 |
| TauI | GCSGC | 1 cut(s) | 2311 |
| TfiI | GAWTC | 8 cut(s) | 140, 170, 461, 821, 1040, 1091, 1625, 2770 |
| Tru1I | TTAA | 8 cut(s) | 423, 1032, 1601, 1704, 1725, 2031, 2930, 2940 |
| Tru9I | TTAA | 8 cut(s) | 423, 1032, 1601, 1704, 1725, 2031, 2930, 2940 |
| TscAI | CASTG | 6 cut(s) | 217, 321, 703, 778, 1110, 2836 |
| TseFI | GTSAC | 2 cut(s) | 428, 2036 |
| Tsp45I | GTSAC | 2 cut(s) | 428, 2036 |
| TspGWI | ACGGA | 3 cut(s) | 428, 827, 2017 |
| TspRI | CASTG | 6 cut(s) | 217, 321, 703, 778, 1110, 2836 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1550 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1673 |
| Vha464I | CTTAAG | 2 cut(s) | 1703, 1724 |
| VpaK11BI | GGWCC | 4 cut(s) | 1199, 1589, 1921, 2336 |
| VspI | ATTAAT | 1 cut(s) | 1032 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1454, 2141, 2316 |
| XapI | RAATTY | 5 cut(s) | 1569, 1649, 1669, 2125, 2631 |
| XbaI | TCTAGA | 1 cut(s) | 2773 |
| XceI | RCATGY | 5 cut(s) | 389, 962, 1388, 1406, 1469 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1374 |
| XhoI | CTCGAG | 1 cut(s) | 1895 |
| XspI | CTAG | 9 cut(s) | 12, 144, 357, 477, 906, 1518, 2255, 2568, 2774 |
| Zsp2I | ATGCAT | 1 cut(s) | 1919 |