Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0004154

Physical Location & Seq

Genomic Coordinates Reverse (-)

336497 .. 344648

Gene Structure 8152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g00540.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3012 bp

ATGATGCATGCAAGGAGACTAAAGTTTAGAAATCAGAGATGGGTGCTTCAAATGTCCAAATATTCAGCAACGCCTACCTACACTGTTCATGGTTCTTCTCAATCTTTGGGTCATAAAACAATTTCGGGAAACCACTGTTTTCATGGTAGTTTTATTAGAAGCCATCTCGTAGATTCATTCTTGTTGCGTAATGTTGCTCCTGGTTATAGCTGCACTGGTTTGCATGTAAGGTCTAATCCGTGTTTGAAGGGTAGCCAGTTACGTGCCTACAGTTCTGAAGGTGACGGAAGGAATGCAAATGAGGATAATCAAACACCAGTGAAAGGTGATGCGGACCTCGATAAAGGGAAGTCTTCTCAAGAAAAAGCAAAGGAAGATGGGAGGAGTGTGGATGCACATGCTCTGCTTGGGGAACAAGATCAATCGGAATGGCTTACTAGTCAAAAGATTACCATTGAGAGTAAAAAGAAAGAGTCGCCTTTCTCAACTAAACGAGAGAAGTTCAAAAATGAATTTTTGAGGAGGATTGTTCCGTGGGAGAAAATAACTGTGTCATGGGATACATTTCCTTACTACATTCATGAACCTACCAAAAACCTTTTGGTGGAATGTGCTGCTTCCCATTTGAAACATAAAAAGTTTACTTCCACGTATGGTTCTCGTTTGACATCTTCAAATGGAAGAATTCTGCTTCAGAGTGCTCCAGGCACTGAACTTTATCGTGAAAGATTAGTTAGAGCACTTGCACAAGATCTCAAAGTTCCCCTCTTGGTGCTAGACAGCAGTGTACTTGCTCCTTATGATTTTGGTGACGATTGCGAATCTGAATCAGATGATGATGATATGGAGGAGAGTACTTCTGATTCAGAGATTGAGGATGAGAATGTTGCGAGTAACGAAGAAGATTGGACTAGTAGTAACGAGGCAAAATCAGATTCTAGTGATAAAGATGAAAGTGATGCGCACGCAAGGGCTGAAGCAGCCCTCAAGAAGCTTGTTCCTGTTGAAGAATTTGCAAAGATGGTATCTGGGGAAACTGAGAGTTCGTCTGAATCCTCAAAATCAGAAACTGCCGAGTCTTCTGAGCAATGCAAACGACTGCTAAAGAAAGGAGATCGAGTGAAGTACATCGGGCCTTCTATACGTGTTGAAGCTGATAACAGGCCTTTACCAAAGGGTCAACGAGGGGAGGTATATGAGGTGAGTGGAGATCGAGTTGCTGTTCTTTTGGATGTTAAACAGAAGACAGGAACTGAAGTGGATGAAGAGGAGAAAGTAGCAGGGCAGCCTGCAGATCCACCAGTTTATTGGATACTTGCTAAGGAAATCGAGCATATTCCTGACCCACGGACTGAGGATTGTTATATTGCAATGGAGGCCCTATGTGAGGTATTGCATGCCAAGCAACCTCTTATTGTCTATTTTCCAGACTCTTCTCAATGGATGTCTAGGGCAGTTCCCAAGTCAGATCGCAAGGAGTTTGTCGCTAAGGTGAAAGAAGTTTTTGACGAGTTGTCGGGTCCTGTTGTTTTGATTTGCGGGCAGAACAAAGTTGAATCCGGGTCAAAGGAGAAAGAGAAATTTACAATGATACTTCCAAATTTTGGGCGTCTTGCAAAGCTGCCTCTCTCTCTTAAGCGTCTTACAGAGGGACTTAAAGGAACAAAGAAATCAGATGACAATGAAATATATAAGCTATTCACAAATGTTTTCTGCGTTTATCCGCCAAAGGAGGAAGAGGATCTTCGAACATTCAATAAACAGATTGAAGAAGACAGAAGAATTGTGATAGCAAGGAGCAATTTAAATGAATTACATGAGGTTCTTGAGGAAAATGAGCTCTCATGCAATGACTTATTGCTAGTAGACACTGATGGTGTAATCTTGACAAAGCGAAAGGCTGAGAAAGTAGTTGGCTGGGCAAAAAACCATTACTTGTCATCATGCCTTCTTCCTTCTGTTAAAGGTGAAAGATTGCATCTGCCTCGTGAAAGCCTTGAAATAGCAATTTCACGTTTGAAGGAGCAAGAAAGTTTGTCTCGGAAGCCCTCTCAAAATTTGAAGAACCTAGCAAAGGATGAATATGAGAGCAACTTTGTTTCAGCAGTAGTACCTCCTGGTGAAATTGGTGTTAGGTTTGATGATGTCGGTGCTCTGGAGGACGTGAAGAGAGCGCTGAATGAACTTGTCATTCTTCCAATGAGGAGACCGGAGCTTTTCTCTCATGGAAACTTGTTGCGGCCTTGCAAAGGAATATTACTTTTTGGGCCTCCTGGAACTGGGAAGACCCTTCTTGCCAAGGCACTCGCAACAGAAGCTGGGACGAACTTTATCAGCATAACTGGTTCTACTCTAACATCAAAGTGGTTTGGAGATGCTGAAAAGCTGACCAAGGCTCTCTTCTCCTTTGCCAGCAAGCTTGCTCCCGTCATAATATTTGTTGATGAGGTTGATAGTTTGCTTGGTGCTCGTGGTGGGTCTTTTGAGCATGAGGCAACTAGAAGAATGAGAAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCCAAAGACAGTCAAAGAATCCTCATTCTTGGCGCCACAAATCGACCATTTGACCTTGATGATGCTGTCATTCGTCGGTTACCAAGAAGGATATACGTTGATTTACCTGATGTTGAAAATCGTAAGAAGATATTGAGTATATTTCTTGGTCAAGAGAATCTAGCACTTGGTTTCCAATTTGACAAACTTTCAGAAGCAACGGAGGGATACTCTGGCAGCGATTTGAAGAACCTCTGCATTGCTGCTGCTTATAGACCTGTCCAGGAGCTTTTAGAAGAAGAAAAGAAGGACATAAAAAGTGACGCATCTACGGTGTTAAGGCCGCTGACTCTTGATGATTTTATTCAATCAAAAGCCAAGGTTGGGCCATCAGTTTCCTACGATGCTTCAAGCATGAACGAACTTAGGAAATGGAATGAACAATACGGAGAAGGCGGAAGCAGAAGAAAATCACCATTTGGTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

1004

Amino Acids

112.45

Weight (kDa)

5.87

Isoelectric Point (pI)

52.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004154)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50140 AT1G50140 AT1G50140 AT1G50140 AT1G50140 AT3G19740
fragaria_vesca	FvH4_4g36860 FvH4_4g36860 FvH4_4g36860
malus_domestica	MD13G1006500.v1.1 MD16G1001500.v1.1
prunus_persica	Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1 Prupe.1G346700_v2.0.a1
pyrus_communis	pycom13g00540 pycom16g00410
rosa_chinensis	RchiOBHm_Chr4g0446611
rosa_laevigata	RLG00000005645
rosa_multiflora	Rmu_sc0036387.1_g000001 Rmu_ssc0000144.1_g000003
rosa_roxburghii	Rroxscaffold_5G00387010
rosa_rugosa	Rorug04G0372800 Rorug04G0372900 Rorug04G0373000 Rorug04G0373100
rosa_samantha	Rh4AG434400 Rh4BG443600 Rh4CG460900 Rh4DG442400
rosa_wichuraiana	Rw4G037140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	963
AccB1I	GGYRCC	1 cut(s)	2576
AccB7I	CCANNNNNTGG	1 cut(s)	1604
AccI	GTMKAC	1 cut(s)	1866
AciI	CCGC	6 cut(s)	332, 1539, 1724, 2239, 2867, 2979
AclWI	GGATC	2 cut(s)	1289, 1749
AcsI	RAATTY	6 cut(s)	512, 684, 1010, 1580, 1600, 2056
AcuI	CTGAAG	4 cut(s)	297, 677, 996, 1275
AcyI	GRCGYC	2 cut(s)	1609, 2577
AfaI	GTAC	4 cut(s)	789, 856, 1127, 2112
AfeI	AGCGCT	1 cut(s)	2175
AfiI	CCNNNNNNNGG	8 cut(s)	323, 604, 1387, 1604, 2074, 2249, 2279, 2907
AflII	CTTAAG	1 cut(s)	1634
AflIII	ACRYGT	1 cut(s)	1144
AhdI	GACNNNNNGTC	1 cut(s)	1513
AhlI	ACTAGT	2 cut(s)	437, 911
AjiI	CACGTC	1 cut(s)	2164
AjnI	CCWGG	5 cut(s)	199, 703, 2116, 2272, 2805
AjuI	GAANNNNNNNTTGG	2 cut(s)	2384, 2416
Alw21I	GWGCWC	5 cut(s)	703, 742, 1842, 2155, 2470
Alw26I	GTCTC	3 cut(s)	10, 2043, 2200
AlwI	GGATC	2 cut(s)	1289, 1749
AlwNI	CAGNNNCTG	4 cut(s)	710, 1070, 1253, 2318
Aor51HI	AGCGCT	1 cut(s)	2175
AoxI	GGCC	7 cut(s)	1133, 1163, 1377, 2240, 2267, 2864, 2909
ApeKI	GCWGC	9 cut(s)	210, 614, 980, 1285, 1621, 2525, 2760, 2786, 2789
ApoI	RAATTY	6 cut(s)	512, 684, 1010, 1580, 1600, 2056
AspLEI	GCGC	3 cut(s)	964, 2176, 2579
AspS9I	GGNCC	7 cut(s)	334, 1133, 1378, 1520, 2267, 2544, 2909
AsuC2I	CCSGG	1 cut(s)	1561
AsuHPI	GGTGA	8 cut(s)	293, 338, 821, 1213, 1504, 1979, 2132, 2988
AsuII	TTCGAA	1 cut(s)	1747
AvaII	GGWCC	3 cut(s)	334, 1520, 2544
BanI	GGYRCC	1 cut(s)	2576
BanII	GRGCYC	1 cut(s)	1842
BauI	CACGAG	2 cut(s)	1986, 2469
BbsI	GAAGAC	5 cut(s)	345, 1071, 1250, 1779, 2291
Bbv12I	GWGCWC	5 cut(s)	703, 742, 1842, 2155, 2470
BbvI	GCAGC	9 cut(s)	197, 601, 992, 1297, 1608, 2537, 2772, 2773, 2776
BccI	CCATC	7 cut(s)	33, 171, 371, 1015, 1868, 2528, 2920
BcgI	CGANNNNNNTGC	2 cut(s)	1967, 2001
BciT130I	CCWGG	5 cut(s)	201, 705, 2118, 2274, 2807
BciVI	GTATCC	3 cut(s)	553, 1305, 2744
BcnI	CCSGG	1 cut(s)	1561
BcoDI	GTCTC	3 cut(s)	10, 2043, 2200
BcuI	ACTAGT	2 cut(s)	437, 911
BfaI	CTAG	9 cut(s)	438, 776, 912, 939, 1449, 1862, 2069, 2499, 2705
BfmI	CTRYAG	2 cut(s)	268, 1290
BfoI	RGCGCY	2 cut(s)	2177, 2580
BfrI	CTTAAG	1 cut(s)	1634
BfuI	GTATCC	3 cut(s)	553, 1305, 2744
BglII	AGATCT	1 cut(s)	751
BmcAI	AGTACT	1 cut(s)	856
Bme1390I	CCNGG	6 cut(s)	201, 705, 1561, 2118, 2274, 2807
Bme18I	GGWCC	3 cut(s)	334, 1520, 2544
BmeRI	GACNNNNNGTC	1 cut(s)	1513
BmgBI	CACGTC	1 cut(s)	2164
BmgT120I	GGNCC	7 cut(s)	334, 1133, 1378, 1520, 2267, 2544, 2909
BmiI	GGNNCC	2 cut(s)	1521, 2578
BmrFI	CCNGG	6 cut(s)	201, 705, 1561, 2118, 2274, 2807
BmrI	ACTGGG	1 cut(s)	2289
BmsI	GCATC	8 cut(s)	319, 382, 949, 1987, 2365, 2596, 2858, 2917
BmuI	ACTGGG	1 cut(s)	2289
BpiI	GAAGAC	5 cut(s)	345, 1071, 1250, 1779, 2291
BplI	GAGNNNNNCTC	4 cut(s)	2204, 2236, 2738, 2770
BpmI	CTGGAG	2 cut(s)	687, 2177
Bpu10I	CCTNAGC	2 cut(s)	1320, 1488
Bpu14I	TTCGAA	1 cut(s)	1747
BpuEI	CTTGAG	3 cut(s)	342, 971, 1847
BpuMI	CCSGG	1 cut(s)	1561
BsaAI	YACGTR	3 cut(s)	263, 651, 1145
BsaHI	GRCGYC	2 cut(s)	1609, 2577
BsaI	GGTCTC	1 cut(s)	2200
BsaJI	CCNNGG	5 cut(s)	533, 1346, 2298, 2391, 2901
BsaWI	WCCGGW	1 cut(s)	2209
BsaXI	ACNNNNNCTCC	4 cut(s)	1104, 1134, 1200, 1230
Bsc4I	CCNNNNNNNGG	8 cut(s)	323, 604, 1387, 1604, 2074, 2249, 2279, 2907
Bse1I	ACTGG	6 cut(s)	220, 256, 317, 1301, 2284, 2347
Bse3DI	GCAATG	4 cut(s)	1094, 1377, 1855, 2781
BseBI	CCWGG	5 cut(s)	201, 705, 2118, 2274, 2807
BseDI	CCNNGG	5 cut(s)	533, 1346, 2298, 2391, 2901
BseGI	GGATG	7 cut(s)	397, 883, 1237, 1267, 1449, 2083, 2539
BseLI	CCNNNNNNNGG	8 cut(s)	323, 604, 1387, 1604, 2074, 2249, 2279, 2907
BseMI	GCAATG	4 cut(s)	1094, 1377, 1855, 2781
BseMII	CTCAG	4 cut(s)	1029, 1074, 1344, 1893
BseNI	ACTGG	6 cut(s)	220, 256, 317, 1301, 2284, 2347
BseRI	GAGGAG	5 cut(s)	397, 535, 863, 1283, 2218
BseXI	GCAGC	9 cut(s)	197, 601, 992, 1297, 1608, 2537, 2772, 2773, 2776
BseYI	CCCAGC	2 cut(s)	1917, 2318
BsgI	GTGCAG	1 cut(s)	196
BshFI	GGCC	7 cut(s)	1135, 1165, 1379, 2242, 2269, 2866, 2911
BshNI	GGYRCC	1 cut(s)	2576
BsiHKAI	GWGCWC	5 cut(s)	703, 742, 1842, 2155, 2470
BsiSI	CCGG	2 cut(s)	1560, 2210
BslFI	GGGAC	2 cut(s)	1665, 2335
BslI	CCNNNNNNNGG	8 cut(s)	323, 604, 1387, 1604, 2074, 2249, 2279, 2907
BsmAI	GTCTC	3 cut(s)	10, 2043, 2200
BsmFI	GGGAC	2 cut(s)	1665, 2335
BsmI	GAATGC	1 cut(s)	298
BsnI	GGCC	7 cut(s)	1135, 1165, 1379, 2242, 2269, 2866, 2911
Bso31I	GGTCTC	1 cut(s)	2200
Bsp119I	TTCGAA	1 cut(s)	1747
Bsp1286I	GDGCHC	5 cut(s)	703, 742, 1842, 2155, 2470
Bsp143I	GATC	7 cut(s)	418, 751, 1114, 1210, 1294, 1468, 1741
BspACI	CCGC	6 cut(s)	332, 1539, 1724, 2239, 2867, 2979
BspANI	GGCC	7 cut(s)	1135, 1165, 1379, 2242, 2269, 2866, 2911
BspCNI	CTCAG	4 cut(s)	1030, 1075, 1345, 1894
BspHI	TCATGA	1 cut(s)	580
BspLI	GGNNCC	2 cut(s)	1521, 2578
BspMAI	CTGCAG	1 cut(s)	1294
BspPI	GGATC	2 cut(s)	1289, 1749
BspT104I	TTCGAA	1 cut(s)	1747
BspT107I	GGYRCC	1 cut(s)	2576
BspTI	CTTAAG	1 cut(s)	1634
BspTNI	GGTCTC	1 cut(s)	2200
BsrDI	GCAATG	4 cut(s)	1094, 1377, 1855, 2781
BsrI	ACTGG	6 cut(s)	220, 256, 317, 1301, 2284, 2347
BssECI	CCNNGG	5 cut(s)	533, 1346, 2298, 2391, 2901
BssMI	GATC	7 cut(s)	418, 751, 1114, 1210, 1294, 1468, 1741
BssNI	GRCGYC	2 cut(s)	1609, 2577
BssSI	CACGAG	2 cut(s)	1986, 2469
BssT1I	CCWWGG	3 cut(s)	2298, 2391, 2901
Bst2BI	CACGAG	2 cut(s)	1986, 2469
Bst2UI	CCWGG	5 cut(s)	201, 705, 2118, 2274, 2807
Bst4CI	ACNGT	6 cut(s)	85, 137, 272, 550, 2555, 2857
Bst6I	CTCTTC	5 cut(s)	1260, 1438, 1731, 2162, 2405
BstACI	GRCGYC	2 cut(s)	1609, 2577
BstAFI	CTTAAG	1 cut(s)	1634
BstBAI	YACGTR	3 cut(s)	263, 651, 1145
BstBI	TTCGAA	1 cut(s)	1747
BstC8I	GCNNGC	8 cut(s)	9, 966, 1290, 1398, 1541, 2413, 2417, 2421
BstDEI	CTNAG	7 cut(s)	1038, 1083, 1320, 1353, 1488, 1902, 2948
BstDSI	CCRYGG	2 cut(s)	533, 1346
BstEII	GGTNACC	1 cut(s)	2622
BstENI	CCTNNNNNAGG	3 cut(s)	1385, 2072, 2247
BstF5I	GGATG	7 cut(s)	397, 883, 1237, 1267, 1449, 2083, 2539
BstH2I	RGCGCY	2 cut(s)	2177, 2580
BstHHI	GCGC	3 cut(s)	964, 2176, 2579
BstKTI	GATC	7 cut(s)	421, 754, 1117, 1213, 1297, 1471, 1744
BstMAI	GTCTC	3 cut(s)	10, 2043, 2200
BstMBI	GATC	7 cut(s)	418, 751, 1114, 1210, 1294, 1468, 1741
BstMWI	GCNNNNNNNGC	4 cut(s)	980, 1376, 1402, 2315
BstNI	CCWGG	5 cut(s)	201, 705, 2118, 2274, 2807
BstNSI	RCATGY	4 cut(s)	11, 227, 401, 1400
BstPI	GGTNACC	1 cut(s)	2622
BstSCI	CCNGG	6 cut(s)	199, 703, 1559, 2116, 2272, 2805
BstSFI	CTRYAG	2 cut(s)	268, 1290
BstV1I	GCAGC	9 cut(s)	197, 601, 992, 1297, 1608, 2537, 2772, 2773, 2776
BstV2I	GAAGAC	5 cut(s)	345, 1071, 1250, 1779, 2291
BstX2I	RGATCY	3 cut(s)	751, 1294, 1741
BstXI	CCANNNNNNTGG	1 cut(s)	1308
BstYI	RGATCY	3 cut(s)	751, 1294, 1741
BsuI	GTATCC	3 cut(s)	553, 1305, 2744
BsuRI	GGCC	7 cut(s)	1135, 1165, 1379, 2242, 2269, 2866, 2911
BtgI	CCRYGG	2 cut(s)	533, 1346
BtrI	CACGTC	1 cut(s)	2164
BtsCI	GGATG	7 cut(s)	397, 883, 1237, 1267, 1449, 2083, 2539
BtsI	GCAGTG	1 cut(s)	790
BtsIMutI	CAGTG	7 cut(s)	81, 133, 213, 324, 708, 790, 1869
Cac8I	GCNNGC	8 cut(s)	9, 966, 1290, 1398, 1541, 2413, 2417, 2421
CaiI	CAGNNNCTG	4 cut(s)	710, 1070, 1253, 2318
CciI	TCATGA	1 cut(s)	580
CfoI	GCGC	3 cut(s)	964, 2176, 2579
Cfr13I	GGNCC	7 cut(s)	334, 1133, 1378, 1520, 2267, 2544, 2909
CseI	GACGC	3 cut(s)	1598, 1628, 2855
Csp6I	GTAC	4 cut(s)	788, 855, 1126, 2111
CviQI	GTAC	4 cut(s)	788, 855, 1126, 2111
DdeI	CTNAG	7 cut(s)	1038, 1083, 1320, 1353, 1488, 1902, 2948
DinI	GGCGCC	1 cut(s)	2578
DpnI	GATC	7 cut(s)	420, 753, 1116, 1212, 1296, 1470, 1743
DpnII	GATC	7 cut(s)	418, 751, 1114, 1210, 1294, 1468, 1741
DraI	TTTAAA	1 cut(s)	1806
DriI	GACNNNNNGTC	1 cut(s)	1513
Eam1104I	CTCTTC	5 cut(s)	1260, 1438, 1731, 2162, 2405
Eam1105I	GACNNNNNGTC	1 cut(s)	1513
EarI	CTCTTC	5 cut(s)	1260, 1438, 1731, 2162, 2405
EciI	GGCGGA	2 cut(s)	1713, 2994
Ecl136II	GAGCTC	1 cut(s)	1840
Eco130I	CCWWGG	3 cut(s)	2298, 2391, 2901
Eco147I	AGGCCT	1 cut(s)	1165
Eco24I	GRGCYC	1 cut(s)	1842
Eco31I	GGTCTC	1 cut(s)	2200
Eco47I	GGWCC	3 cut(s)	334, 1520, 2544
Eco47III	AGCGCT	1 cut(s)	2175
Eco53kI	GAGCTC	1 cut(s)	1840
Eco57I	CTGAAG	4 cut(s)	297, 677, 996, 1275
Eco91I	GGTNACC	1 cut(s)	2622
EcoICRI	GAGCTC	1 cut(s)	1840
EcoNI	CCTNNNNNAGG	3 cut(s)	1385, 2072, 2247
EcoO109I	RGGNCCY	2 cut(s)	1378, 1520
EcoO65I	GGTNACC	1 cut(s)	2622
EcoRI	GAATTC	1 cut(s)	684
EcoRII	CCWGG	5 cut(s)	199, 703, 2116, 2272, 2805
EcoT14I	CCWWGG	3 cut(s)	2298, 2391, 2901
EcoT22I	ATGCAT	1 cut(s)	9
EcoT38I	GRGCYC	1 cut(s)	1842
EgeI	GGCGCC	1 cut(s)	2578
EheI	GGCGCC	1 cut(s)	2578
ErhI	CCWWGG	3 cut(s)	2298, 2391, 2901
FalI	AAGNNNNNCTT	4 cut(s)	1728, 1760, 2384, 2416
FaqI	GGGAC	2 cut(s)	1665, 2335
FauI	CCCGC	1 cut(s)	1532
FblI	GTMKAC	1 cut(s)	1866
FokI	GGATG	7 cut(s)	404, 890, 1244, 1274, 1456, 2090, 2546
FriOI	GRGCYC	1 cut(s)	1842
FspAI	RTGCGCAY	1 cut(s)	963
FspBI	CTAG	9 cut(s)	438, 776, 912, 939, 1449, 1862, 2069, 2499, 2705
FspI	TGCGCA	1 cut(s)	963
GlaI	GCGC	3 cut(s)	963, 2175, 2578
GsaI	CCCAGC	2 cut(s)	1921, 2322
GsuI	CTGGAG	2 cut(s)	687, 2177
HaeII	RGCGCY	2 cut(s)	2177, 2580
HaeIII	GGCC	7 cut(s)	1135, 1165, 1379, 2242, 2269, 2866, 2911
HapII	CCGG	2 cut(s)	1560, 2210
HgaI	GACGC	3 cut(s)	1598, 1628, 2855
HhaI	GCGC	3 cut(s)	964, 2176, 2579
Hin1I	GRCGYC	2 cut(s)	1609, 2577
Hin6I	GCGC	3 cut(s)	962, 2174, 2577
HinP1I	GCGC	3 cut(s)	962, 2174, 2577
HincII	GTYRAC	1 cut(s)	1181
HindII	GTYRAC	1 cut(s)	1181
HindIII	AAGCTT	2 cut(s)	992, 2417
HpaII	CCGG	2 cut(s)	1560, 2210
HphI	GGTGA	8 cut(s)	293, 338, 821, 1213, 1504, 1979, 2132, 2988
Hpy166II	GTNNAC	4 cut(s)	642, 788, 1181, 1867
Hpy8I	GTNNAC	4 cut(s)	642, 788, 1181, 1867
Hpy99I	CGWCG	1 cut(s)	2622
HpyCH4III	ACNGT	6 cut(s)	85, 137, 272, 550, 2555, 2857
HpyCH4IV	ACGT	6 cut(s)	262, 650, 1144, 2014, 2163, 2640
HpyF10VI	GCNNNNNNNGC	4 cut(s)	980, 1376, 1402, 2315
HpyF3I	CTNAG	7 cut(s)	1038, 1083, 1320, 1353, 1488, 1902, 2948
HpySE526I	ACGT	6 cut(s)	262, 650, 1144, 2014, 2163, 2640
Hsp92I	GRCGYC	2 cut(s)	1609, 2577
HspAI	GCGC	3 cut(s)	962, 2174, 2577
KasI	GGCGCC	1 cut(s)	2576
Kzo9I	GATC	7 cut(s)	418, 751, 1114, 1210, 1294, 1468, 1741
LmnI	GCTCC	8 cut(s)	202, 706, 799, 1797, 2023, 2212, 2428, 2809
Lsp1109I	GCAGC	9 cut(s)	197, 601, 992, 1297, 1608, 2537, 2772, 2773, 2776
LweI	GCATC	8 cut(s)	319, 382, 949, 1987, 2365, 2596, 2858, 2917
MaeI	CTAG	9 cut(s)	438, 776, 912, 939, 1449, 1862, 2069, 2499, 2705
MaeII	ACGT	6 cut(s)	262, 650, 1144, 2014, 2163, 2640
MaeIII	GTNAC	7 cut(s)	258, 281, 809, 893, 917, 2622, 2843
MalI	GATC	7 cut(s)	420, 753, 1116, 1212, 1296, 1470, 1743
MboI	GATC	7 cut(s)	418, 751, 1114, 1210, 1294, 1468, 1741
MflI	RGATCY	3 cut(s)	751, 1294, 1741
MhlI	GDGCHC	5 cut(s)	703, 742, 1842, 2155, 2470
Mly113I	GGCGCC	1 cut(s)	2577
MlyI	GAGTC	4 cut(s)	482, 1085, 1424, 2866
Mph1103I	ATGCAT	1 cut(s)	9
MseI	TTAA	6 cut(s)	1236, 1635, 1656, 1805, 1962, 2861
MslI	CAYNNNNRTG	1 cut(s)	2362
MspA1I	CMGCKG	1 cut(s)	2869
MspCI	CTTAAG	1 cut(s)	1634
MspI	CCGG	2 cut(s)	1560, 2210
MspR9I	CCNGG	6 cut(s)	201, 705, 1561, 2118, 2274, 2807
Mva1269I	GAATGC	1 cut(s)	298
MvaI	CCWGG	5 cut(s)	201, 705, 2118, 2274, 2807
MwoI	GCNNNNNNNGC	4 cut(s)	980, 1376, 1402, 2315
NarI	GGCGCC	1 cut(s)	2577
NciI	CCSGG	1 cut(s)	1561
NdeII	GATC	7 cut(s)	418, 751, 1114, 1210, 1294, 1468, 1741
NlaIV	GGNNCC	2 cut(s)	1521, 2578
NmeAIII	GCCGAG	1 cut(s)	1099
NmuCI	GTSAC	3 cut(s)	281, 809, 2843
NsbI	TGCGCA	1 cut(s)	963
NsiI	ATGCAT	1 cut(s)	9
NspI	RCATGY	4 cut(s)	11, 227, 401, 1400
NspV	TTCGAA	1 cut(s)	1747
PaeI	GCATGC	2 cut(s)	11, 1400
PagI	TCATGA	1 cut(s)	580
PceI	AGGCCT	1 cut(s)	1165
PctI	GAATGC	1 cut(s)	298
PfeI	GAWTC	9 cut(s)	173, 821, 827, 863, 935, 1052, 1556, 2562, 2701
PflMI	CCANNNNNTGG	1 cut(s)	1604
PfoI	TCCNGGA	2 cut(s)	2272, 2805
PleI	GAGTC	4 cut(s)	481, 1084, 1424, 2866
PluTI	GGCGCC	1 cut(s)	2580
PpsI	GAGTC	4 cut(s)	481, 1084, 1424, 2866
Ppu21I	YACGTR	3 cut(s)	263, 651, 1145
PpuMI	RGGWCCY	1 cut(s)	1520
Psp124BI	GAGCTC	1 cut(s)	1842
Psp5II	RGGWCCY	1 cut(s)	1520
Psp6I	CCWGG	5 cut(s)	199, 703, 2116, 2272, 2805
PspEI	GGTNACC	1 cut(s)	2622
PspFI	CCCAGC	2 cut(s)	1917, 2318
PspGI	CCWGG	5 cut(s)	199, 703, 2116, 2272, 2805
PspN4I	GGNNCC	2 cut(s)	1521, 2578
PspPI	GGNCC	7 cut(s)	334, 1133, 1378, 1520, 2267, 2544, 2909
PspPPI	RGGWCCY	1 cut(s)	1520
PstI	CTGCAG	1 cut(s)	1294
PstNI	CAGNNNCTG	4 cut(s)	710, 1070, 1253, 2318
PsuI	RGATCY	3 cut(s)	751, 1294, 1741
RsaI	GTAC	4 cut(s)	789, 856, 1127, 2112
RsaNI	GTAC	4 cut(s)	788, 855, 1126, 2111
RseI	CAYNNNNRTG	1 cut(s)	2362
SacI	GAGCTC	1 cut(s)	1842
SaqAI	TTAA	6 cut(s)	1236, 1635, 1656, 1805, 1962, 2861
Sau3AI	GATC	7 cut(s)	418, 751, 1114, 1210, 1294, 1468, 1741
Sau96I	GGNCC	7 cut(s)	334, 1133, 1378, 1520, 2267, 2544, 2909
ScaI	AGTACT	1 cut(s)	856
SchI	GAGTC	4 cut(s)	482, 1085, 1424, 2866
ScrFI	CCNGG	6 cut(s)	201, 705, 1561, 2118, 2274, 2807
SduI	GDGCHC	5 cut(s)	703, 742, 1842, 2155, 2470
SfaNI	GCATC	8 cut(s)	319, 382, 949, 1987, 2365, 2596, 2858, 2917
SfcI	CTRYAG	2 cut(s)	268, 1290
SfoI	GGCGCC	1 cut(s)	2578
SfuI	TTCGAA	1 cut(s)	1747
SinI	GGWCC	3 cut(s)	334, 1520, 2544
SmiI	ATTTAAAT	1 cut(s)	1806
SmiMI	CAYNNNNRTG	1 cut(s)	2362
SmlI	CTYRAG	4 cut(s)	357, 986, 1634, 1826
SmoI	CTYRAG	4 cut(s)	357, 986, 1634, 1826
SpeI	ACTAGT	2 cut(s)	437, 911
SphI	GCATGC	2 cut(s)	11, 1400
SseBI	AGGCCT	1 cut(s)	1165
SsiI	CCGC	6 cut(s)	332, 1539, 1724, 2239, 2867, 2979
SspDI	GGCGCC	1 cut(s)	2576
SspI	AATATT	3 cut(s)	62, 2256, 2436
SspMI	CTAG	9 cut(s)	438, 776, 912, 939, 1449, 1862, 2069, 2499, 2705
SstI	GAGCTC	1 cut(s)	1842
StuI	AGGCCT	1 cut(s)	1165
StyD4I	CCNGG	6 cut(s)	199, 703, 1559, 2116, 2272, 2805
StyI	CCWWGG	3 cut(s)	2298, 2391, 2901
SwaI	ATTTAAAT	1 cut(s)	1806
TaaI	ACNGT	6 cut(s)	85, 137, 272, 550, 2555, 2857
TaiI	ACGT	6 cut(s)	265, 653, 1147, 2017, 2166, 2643
TaqI	TCGA	6 cut(s)	339, 1117, 1213, 1329, 1747, 2587
TatI	WGTACW	3 cut(s)	787, 854, 1125
TauI	GCSGC	2 cut(s)	2242, 2869
TfiI	GAWTC	9 cut(s)	173, 821, 827, 863, 935, 1052, 1556, 2562, 2701
Tru1I	TTAA	6 cut(s)	1236, 1635, 1656, 1805, 1962, 2861
Tru9I	TTAA	6 cut(s)	1236, 1635, 1656, 1805, 1962, 2861
TscAI	CASTG	7 cut(s)	88, 140, 220, 324, 715, 790, 1876
TseFI	GTSAC	3 cut(s)	281, 809, 2843
TseI	GCWGC	9 cut(s)	210, 614, 980, 1285, 1621, 2525, 2760, 2786, 2789
Tsp45I	GTSAC	3 cut(s)	281, 809, 2843
TspGWI	ACGGA	6 cut(s)	228, 300, 522, 1363, 2759, 2985
TspRI	CASTG	7 cut(s)	88, 140, 220, 324, 715, 790, 1876
Van91I	CCANNNNNTGG	1 cut(s)	1604
Vha464I	CTTAAG	1 cut(s)	1634
VpaK11BI	GGWCC	3 cut(s)	334, 1520, 2544
XagI	CCTNNNNNAGG	3 cut(s)	1385, 2072, 2247
XapI	RAATTY	6 cut(s)	512, 684, 1010, 1580, 1600, 2056
XceI	RCATGY	4 cut(s)	11, 227, 401, 1400
XcmI	CCANNNNNNNNNTGG	3 cut(s)	140, 598, 1305
XmiI	GTMKAC	1 cut(s)	1866
XspI	CTAG	9 cut(s)	438, 776, 912, 939, 1449, 1862, 2069, 2499, 2705
ZrmI	AGTACT	1 cut(s)	856
Zsp2I	ATGCAT	1 cut(s)	9

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.