RLG00000005645

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
555726 .. 565907
10182 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005645

Sequence Viewer

Length: 2982 bp
ATGCTTCAACTGTCCAATTCTATAAAGCCAAGCTATGTTCATCATGGTTCTTCTCAGTCGTTGGGACGTATTACAGTTCCTGCAAACTACTACTCAGATGCTAGTTTTATTAGAAGCCGTCTCATAGATTCGTTCTCATTGCGAAGTGGTGTATCTGCTAATAGTTGCACTGGTTTGCAAGTGAGGTCTAATACGTGTTTGAAGGGTAGTCAGTTACGCTTTTACAGCTCAGAAGGCGATGGAAGAAATGCAAATGAGGGTAAACAGTTACCAGTGAAAGATGGTGCTAACTTTGATAAAGAAAAGACTTGGCAAGAAAAGGCTAGGAAAGATGTTAGGCCTTCTGATGCACACGCTCTACTTGGGGAGCAAGATCAAAAGGAATGGCTTAATAGTCACAAACTTACCATCGAGAGTAAAAAGAAAGAATCACCTTTTTTGACTAGACGAGAGAAGTTTAAAAATGAGTTTCTATGGAGGGTTGTTCCATGGGAGAAGATAACTGTTTCATGGGAGATGTTTCCTTACTATATCGATGAACCCACCAAAAATCTTTTGACGGAATGTGCTGCTGCTCATTTGAAACATAAAAAGTTCACTTCTACTTATGGTTCTCGTTTGACATCTTCAAGCGGGAGAATACTGCTTCAGAGTTCTCCAGGCACTGAGCTTTACCGTGAAAGATTAGTTAGAGCTCTAGCGCGAGATCTTCAAGTTCCACTACTTGTGCTTGACAGCAGTGTTCTTGCTCCTTATGATTTTGGTGATGATTGTCAAACGGAGTCTGAATCAGAGGATGATGGTGTGGAGGAGTGTACTTCAGAGTCAGAGATTGATGATGAGAATGATGCGAGTAATGAAGAAGAATGGACTAGTAGTAATGAGGCAAAGTCAGATTGTAGCGATAAAGATGAAGTTGATGTGCATGCAAAGGCTGAAGCAGCCCTCAAGAAGCTTGTTCCTCTTGAACAATTTTCTAAGATGGTATCTGGGGAAATCAATGTTGAACCTGAGTCCTCAAAGTCAGAAGCTGCTGAGCCTACCAATAAATCCAAAGAATCCAAGCGGCCACTGAAGAAAGGTGATCGGGTGAAGTATATTGGACCTACTTTACGTGTTGAAGCTGATAACAGGCCTTTACCGAATGGTCAACGTGGGGAGGTATATGAGGTGAGTGGAGATCGAATTGCTGTTATATTGGATATAAATGATGACACAGGAAGTGATGTGGATAAAGAGGAGAAAGGAGAAGACCAGCCGGCAAACCCACCAGTTTACTGGATACATGCAAATCATGTCGAGCATGTTGATGAGACTCAGACTGAGGATTGTTATATTGCAATGGAGGCCCTACGTGAGGTATTGCATGCCAAGCAACCTCTTATTGTCTATTTTCCAGACTCTTCTCAATGGTTGTCTAGGGCAGTTCCCAAGTCAAACAGGAAAGACTTTGTTAATAAGGTGCAAGAAATTTTTGACCAGTTATCAGGTCCTGTTGTTTTAATCTGTGGACAGAACAAAACTGAATCCGAGTCAAAGGAGAAAGAGAAATTTACGATGATACTACCAAATTTTGGTCGTCTTGCAAAGCTGCCTGTTTCTCTTAAGCGTCTTACTGAGGGACTTAAGGCAACAAAGCGATCTGATGAGGATGAAATATATAAGCTCTTCTCAAATGTGTTCTGCATACATCCCCCAAAGGAAGAAGAGGTACTTCAGACATTCAATAAACAGATTGAAGAAGATGGGAGAATTGTGATGTCAAGGAGCAATTTGAATGAATTACATAAGGTTCTCGAGGAACATGAGCTATCATGCGTGGACCTATTGCAAGTAGATACTGACGGTGTGATCTTGACAAAGCGAAAAGCTGAGAAAGTAGTTGGCTGGGCTAAAAGCCATTACTTATCATCTTGTCTTGTTCCTTCTGTTAAAGGTGACAGACTGCAGCTTCCTCGTGAAAGCCTTGAAGTAGCAATTTCACGTTTGAAGGAGCAAGAAAGTTTGTCTCGGAAACCCTCTCAAAATTTGAAGAACCTTGCGAAGGATGAATATGAGAGTAACTTTGTTTCAGCAGTTGTACCTCCTGGTGAAATTGGTGTCAGGTTTGATGATGTAGGTGCTCTGGAAGAGGTGAAGAAGGCTTTGAATGAACTAGTCATTCTTCCAATGAGAAGACCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCTTGCAAAGGGATATTACTTTTTGGTCCTCCTGGAACTGGGAAGACCCTTCTTGCCAAGGCACTTGCAACAGAAGCTGGGGCAAACTTTATCAGCATTACTGGTTCAACTCTAACATCAAAGTGGTTTGGAGATGCTGAAAAGCTGACCAAAGCTCTCTTCTCTTTTGCCAGCAAGCTTGCTCCCGTCATTATATTTGTCGATGAGGTTGATAGTTTGCTTGGTGCTCGTGGTGGTTCTTTTGAGCATGAGGCAACTAGAAGAATGAGAAATGAGTTCATGGCAGCTTGGGATGGATTGCGATCCAAAGACAGTCAAAGAATTCTTATTCTCGGAGCCACAAATCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGCTTACCAAGAAGGATATATGTTGATTTACCAGATGTTGAAAATCGCAAGAAGATTTTGAGTATCTTTCTTGCTCAAGAGAATCTAGAACCTGGTTTCCAATTTGATAAACTTTCAGAGGCAACCGAGGGATACTCGGGCAGTGATTTGAAGAACCTCTGTATTGCTGCTGCATATAGGCCTGTCCAGGAACTATTAGAAGAAGAAACCAAGGACAGCAAAAGTGATTTATCTCCACCTTTAAGGCCACTTAATTTAGATGACTTTATTCAATCAAAAGCCAAGGTTGGGCCATCTGTGTCATATGATGCTGCAAGCATGAACGAGCTTAGGAAATGGAATGAGCAATACGGTGAAGGTGGAAGCAGGAGAAAATCACCATTTGGTTTTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

994

Amino Acids

111.56

Weight (kDa)

5.57

Isoelectric Point (pI)

53.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7751 PF24933 604 - 661 4.8e-07 Domain of unknown function (DUF7751)
AAA PF00004 742 - 872 8.4e-37 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 896 - 933 1e-10 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1574
AccII CGCG 1 cut(s) 703
AciI CCGC 3 cut(s) 633, 1066, 2209
AclWI GGATC 1 cut(s) 2508
AcoI YGGCCR 2 cut(s) 1067, 2558
AcsI RAATTY 5 cut(s) 1470, 1550, 1570, 2026, 2532
AcuI CTGAAG 5 cut(s) 632, 804, 957, 1094, 1700
AfaI GTAC 3 cut(s) 817, 1713, 2082
AfiI CCNNNNNNNGG 7 cut(s) 1357, 1574, 2044, 2219, 2249, 2556, 2877
AflII CTTAAG 2 cut(s) 1604, 1625
AflIII ACRYGT 2 cut(s) 194, 1114
AhlI ACTAGT 2 cut(s) 872, 2155
AjnI CCWGG 5 cut(s) 658, 2086, 2242, 2680, 2775
AjuI GAANNNNNNNTTGG 2 cut(s) 2354, 2386
AloI GAACNNNNNNTCC 2 cut(s) 2670, 2702
Alw21I GWGCWC 3 cut(s) 697, 2125, 2440
Alw26I GTCTC 3 cut(s) 125, 1307, 2013
AlwI GGATC 1 cut(s) 2508
AlwNI CAGNNNCTG 5 cut(s) 80, 665, 1031, 1493, 2288
Ama87I CYCGRG 2 cut(s) 1796, 2725
AoxI GGCC 9 cut(s) 338, 1067, 1133, 1347, 2210, 2558, 2768, 2834, 2879
ApoI RAATTY 5 cut(s) 1470, 1550, 1570, 2026, 2532
AspLEI GCGC 1 cut(s) 703
AspS9I GGNCC 6 cut(s) 1103, 1348, 1490, 1822, 2237, 2879
AvaI CYCGRG 2 cut(s) 1796, 2725
AvaII GGWCC 4 cut(s) 1103, 1490, 1822, 2237
BanII GRGCYC 1 cut(s) 697
BarI GAAGNNNNNNTAC 2 cut(s) 1695, 1727
BauI CACGAG 3 cut(s) 1956, 2193, 2439
BbsI GAAGAC 3 cut(s) 1257, 2182, 2261
Bbv12I GWGCWC 3 cut(s) 697, 2125, 2440
BccI CCATC 8 cut(s) 233, 275, 416, 794, 976, 1739, 2498, 2890
BceAI ACGGC 1 cut(s) 102
BcgI CGANNNNNNTGC 2 cut(s) 1937, 1971
BciT130I CCWGG 5 cut(s) 660, 2088, 2244, 2682, 2777
BciVI GTATCC 2 cut(s) 1275, 2714
BcoDI GTCTC 3 cut(s) 125, 1307, 2013
BcuI ACTAGT 2 cut(s) 872, 2155
BfaI CTAG 9 cut(s) 102, 324, 444, 698, 873, 1419, 2156, 2469, 2675
BfmI CTRYAG 1 cut(s) 1946
BfrI CTTAAG 2 cut(s) 1604, 1625
BfuI GTATCC 2 cut(s) 1275, 2714
BglII AGATCT 1 cut(s) 706
BlpI GCTNAGC 1 cut(s) 1035
Bme1390I CCNGG 5 cut(s) 660, 2088, 2244, 2682, 2777
Bme18I GGWCC 4 cut(s) 1103, 1490, 1822, 2237
BmeT110I CYCGRG 2 cut(s) 1796, 2725
BmgT120I GGNCC 6 cut(s) 1103, 1348, 1490, 1822, 2237, 2879
BmiI GGNNCC 1 cut(s) 2548
BmrFI CCNGG 5 cut(s) 660, 2088, 2244, 2682, 2777
BmrI ACTGGG 1 cut(s) 2259
BmsI GCATC 6 cut(s) 88, 337, 838, 2335, 2566, 2887
BmuI ACTGGG 1 cut(s) 2259
BpiI GAAGAC 3 cut(s) 1257, 2182, 2261
BplI GAGNNNNNCTC 4 cut(s) 2174, 2206, 2708, 2740
BpmI CTGGAG 1 cut(s) 642
Bpu10I CCTNAGC 1 cut(s) 2918
Bpu1102I GCTNAGC 1 cut(s) 1035
BpuEI CTTGAG 2 cut(s) 932, 2649
Bsa29I ATCGAT 1 cut(s) 534
BsaAI YACGTR 3 cut(s) 195, 1115, 1355
BsaBI GATNNNNATC 1 cut(s) 2512
BsaJI CCNNGG 5 cut(s) 488, 2268, 2715, 2799, 2871
Bsc4I CCNNNNNNNGG 7 cut(s) 1357, 1574, 2044, 2219, 2249, 2556, 2877
Bse118I RCCGGY 1 cut(s) 1258
Bse1I ACTGG 7 cut(s) 175, 272, 1271, 1283, 1480, 2254, 2317
Bse3DI GCAATG 2 cut(s) 137, 1347
Bse8I GATNNNNATC 1 cut(s) 2512
BseBI CCWGG 5 cut(s) 660, 2088, 2244, 2682, 2777
BseCI ATCGAT 1 cut(s) 534
BseDI CCNNGG 5 cut(s) 488, 2268, 2715, 2799, 2871
BseGI GGATG 5 cut(s) 802, 1657, 1690, 2053, 2509
BseJI GATNNNNATC 1 cut(s) 2512
BseLI CCNNNNNNNGG 7 cut(s) 1357, 1574, 2044, 2219, 2249, 2556, 2877
BseMI GCAATG 2 cut(s) 137, 1347
BseNI ACTGG 7 cut(s) 175, 272, 1271, 1283, 1480, 2254, 2317
BseRI GAGGAG 2 cut(s) 824, 1253
BseYI CCCAGC 2 cut(s) 1887, 2288
Bsh1236I CGCG 1 cut(s) 703
BshFI GGCC 9 cut(s) 340, 1069, 1135, 1349, 2212, 2560, 2770, 2836, 2881
BshVI ATCGAT 1 cut(s) 534
BsiHKAI GWGCWC 3 cut(s) 697, 2125, 2440
BsiHKCI CYCGRG 2 cut(s) 1796, 2725
BsiSI CCGG 1 cut(s) 1259
BslFI GGGAC 2 cut(s) 78, 1635
BslI CCNNNNNNNGG 7 cut(s) 1357, 1574, 2044, 2219, 2249, 2556, 2877
BsmAI GTCTC 3 cut(s) 125, 1307, 2013
BsmBI CGTCTC 1 cut(s) 125
BsmFI GGGAC 2 cut(s) 78, 1635
BsnI GGCC 9 cut(s) 340, 1069, 1135, 1349, 2212, 2560, 2770, 2836, 2881
BsoBI CYCGRG 2 cut(s) 1796, 2725
Bsp1286I GDGCHC 3 cut(s) 697, 2125, 2440
Bsp143I GATC 7 cut(s) 373, 706, 1084, 1180, 1640, 1851, 2513
Bsp1720I GCTNAGC 1 cut(s) 1035
Bsp19I CCATGG 1 cut(s) 488
BspACI CCGC 3 cut(s) 633, 1066, 2209
BspANI GGCC 9 cut(s) 340, 1069, 1135, 1349, 2212, 2560, 2770, 2836, 2881
BspDI ATCGAT 1 cut(s) 534
BspFNI CGCG 1 cut(s) 703
BspLI GGNNCC 1 cut(s) 2548
BspMAI CTGCAG 1 cut(s) 1950
BspPI GGATC 1 cut(s) 2508
BspQI GCTCTTC 1 cut(s) 1673
BspTI CTTAAG 2 cut(s) 1604, 1625
BsrDI GCAATG 2 cut(s) 137, 1347
BsrFI RCCGGY 1 cut(s) 1258
BsrI ACTGG 7 cut(s) 175, 272, 1271, 1283, 1480, 2254, 2317
BssAI RCCGGY 1 cut(s) 1258
BssECI CCNNGG 5 cut(s) 488, 2268, 2715, 2799, 2871
BssMI GATC 7 cut(s) 373, 706, 1084, 1180, 1640, 1851, 2513
BssSI CACGAG 3 cut(s) 1956, 2193, 2439
BssT1I CCWWGG 4 cut(s) 488, 2268, 2799, 2871
Bst2BI CACGAG 3 cut(s) 1956, 2193, 2439
Bst2UI CCWGG 5 cut(s) 660, 2088, 2244, 2682, 2777
Bst4CI ACNGT 8 cut(s) 12, 76, 267, 505, 677, 1847, 2525, 2942
Bst6I CTCTTC 5 cut(s) 1408, 1673, 1701, 2124, 2375
BstAFI CTTAAG 2 cut(s) 1604, 1625
BstBAI YACGTR 3 cut(s) 195, 1115, 1355
BstC8I GCNNGC 7 cut(s) 927, 1260, 1368, 2383, 2387, 2391, 2905
BstDSI CCRYGG 1 cut(s) 488
BstENI CCTNNNNNAGG 3 cut(s) 1355, 2042, 2217
BstF5I GGATG 5 cut(s) 802, 1657, 1690, 2053, 2509
BstFNI CGCG 1 cut(s) 703
BstHHI GCGC 1 cut(s) 703
BstKTI GATC 7 cut(s) 376, 709, 1087, 1183, 1643, 1854, 2516
BstMAI GTCTC 3 cut(s) 125, 1307, 2013
BstMBI GATC 7 cut(s) 373, 706, 1084, 1180, 1640, 1851, 2513
BstMWI GCNNNNNNNGC 6 cut(s) 225, 234, 941, 1346, 1372, 2285
BstNI CCWGG 5 cut(s) 660, 2088, 2244, 2682, 2777
BstNSI RCATGY 4 cut(s) 929, 1289, 1307, 1370
BstSCI CCNGG 5 cut(s) 658, 2086, 2242, 2680, 2775
BstSFI CTRYAG 1 cut(s) 1946
BstUI CGCG 1 cut(s) 703
BstV2I GAAGAC 3 cut(s) 1257, 2182, 2261
BstX2I RGATCY 1 cut(s) 706
BstXI CCANNNNNNTGG 1 cut(s) 1278
BstYI RGATCY 1 cut(s) 706
Bsu15I ATCGAT 1 cut(s) 534
BsuI GTATCC 2 cut(s) 1275, 2714
BsuRI GGCC 9 cut(s) 340, 1069, 1135, 1349, 2212, 2560, 2770, 2836, 2881
BsuTUI ATCGAT 1 cut(s) 534
BtgI CCRYGG 1 cut(s) 488
BtgZI GCGATG 1 cut(s) 252
BtsCI GGATG 5 cut(s) 802, 1657, 1690, 2053, 2509
BtsI GCAGTG 2 cut(s) 745, 2737
BtsIMutI CAGTG 6 cut(s) 168, 279, 663, 745, 1070, 2737
Cac8I GCNNGC 7 cut(s) 927, 1260, 1368, 2383, 2387, 2391, 2905
CaiI CAGNNNCTG 5 cut(s) 80, 665, 1031, 1493, 2288
CfoI GCGC 1 cut(s) 703
Cfr10I RCCGGY 1 cut(s) 1258
Cfr13I GGNCC 6 cut(s) 1103, 1348, 1490, 1822, 2237, 2879
ClaI ATCGAT 1 cut(s) 534
CseI GACGC 1 cut(s) 1598
CsiI ACCWGGT 1 cut(s) 2680
Csp6I GTAC 3 cut(s) 816, 1712, 2081
CviQI GTAC 3 cut(s) 816, 1712, 2081
DpnI GATC 7 cut(s) 375, 708, 1086, 1182, 1642, 1853, 2515
DpnII GATC 7 cut(s) 373, 706, 1084, 1180, 1640, 1851, 2513
DraI TTTAAA 1 cut(s) 460
EaeI YGGCCR 2 cut(s) 1067, 2558
Eam1104I CTCTTC 5 cut(s) 1408, 1673, 1701, 2124, 2375
EarI CTCTTC 5 cut(s) 1408, 1673, 1701, 2124, 2375
Ecl136II GAGCTC 1 cut(s) 695
Eco130I CCWWGG 4 cut(s) 488, 2268, 2799, 2871
Eco147I AGGCCT 3 cut(s) 340, 1135, 2770
Eco24I GRGCYC 1 cut(s) 697
Eco47I GGWCC 4 cut(s) 1103, 1490, 1822, 2237
Eco53kI GAGCTC 1 cut(s) 695
Eco57I CTGAAG 5 cut(s) 632, 804, 957, 1094, 1700
Eco88I CYCGRG 2 cut(s) 1796, 2725
EcoICRI GAGCTC 1 cut(s) 695
EcoNI CCTNNNNNAGG 3 cut(s) 1355, 2042, 2217
EcoO109I RGGNCCY 2 cut(s) 1348, 1490
EcoRI GAATTC 1 cut(s) 2532
EcoRII CCWGG 5 cut(s) 658, 2086, 2242, 2680, 2775
EcoT14I CCWWGG 4 cut(s) 488, 2268, 2799, 2871
EcoT38I GRGCYC 1 cut(s) 697
ErhI CCWWGG 4 cut(s) 488, 2268, 2799, 2871
Esp3I CGTCTC 1 cut(s) 125
FalI AAGNNNNNCTT 2 cut(s) 1698, 1730
FaqI GGGAC 2 cut(s) 78, 1635
FauI CCCGC 1 cut(s) 626
FauNDI CATATG 1 cut(s) 2893
FokI GGATG 5 cut(s) 809, 1664, 1677, 2060, 2516
FriOI GRGCYC 1 cut(s) 697
FspBI CTAG 9 cut(s) 102, 324, 444, 698, 873, 1419, 2156, 2469, 2675
GlaI GCGC 1 cut(s) 702
GsaI CCCAGC 2 cut(s) 1891, 2292
GsuI CTGGAG 1 cut(s) 642
HaeIII GGCC 9 cut(s) 340, 1069, 1135, 1349, 2212, 2560, 2770, 2836, 2881
HapII CCGG 1 cut(s) 1259
HgaI GACGC 1 cut(s) 1598
HhaI GCGC 1 cut(s) 703
Hin6I GCGC 1 cut(s) 701
HinP1I GCGC 1 cut(s) 701
HincII GTYRAC 1 cut(s) 1151
HindII GTYRAC 1 cut(s) 1151
HindIII AAGCTT 2 cut(s) 953, 2387
HpaII CCGG 1 cut(s) 1259
Hpy166II GTNNAC 7 cut(s) 263, 597, 816, 1151, 1276, 1511, 1822
Hpy8I GTNNAC 7 cut(s) 263, 597, 816, 1151, 1276, 1511, 1822
Hpy99I CGWCG 1 cut(s) 2592
HpyCH4III ACNGT 8 cut(s) 12, 76, 267, 505, 677, 1847, 2525, 2942
HpyCH4IV ACGT 6 cut(s) 67, 194, 1114, 1153, 1354, 1984
HpyF10VI GCNNNNNNNGC 6 cut(s) 225, 234, 941, 1346, 1372, 2285
HpySE526I ACGT 6 cut(s) 67, 194, 1114, 1153, 1354, 1984
HspAI GCGC 1 cut(s) 701
KroI GCCGGC 1 cut(s) 1258
KroNI GCCGGC 1 cut(s) 1260
Kzo9I GATC 7 cut(s) 373, 706, 1084, 1180, 1640, 1851, 2513
LguI GCTCTTC 1 cut(s) 1673
LmnI GCTCC 6 cut(s) 367, 754, 1767, 1993, 2398, 2546
LweI GCATC 6 cut(s) 88, 337, 838, 2335, 2566, 2887
MabI ACCWGGT 1 cut(s) 2680
MaeI CTAG 9 cut(s) 102, 324, 444, 698, 873, 1419, 2156, 2469, 2675
MaeII ACGT 6 cut(s) 67, 194, 1114, 1153, 1354, 1984
MaeIII GTNAC 5 cut(s) 213, 267, 395, 1937, 2060
MalI GATC 7 cut(s) 375, 708, 1086, 1182, 1642, 1853, 2515
MboI GATC 7 cut(s) 373, 706, 1084, 1180, 1640, 1851, 2513
MflI RGATCY 1 cut(s) 706
MhlI GDGCHC 3 cut(s) 697, 2125, 2440
MlyI GAGTC 6 cut(s) 791, 833, 1022, 1309, 1394, 1541
MroNI GCCGGC 1 cut(s) 1258
MseI TTAA 9 cut(s) 390, 459, 1455, 1502, 1605, 1626, 1932, 2831, 2841
MslI CAYNNNNRTG 2 cut(s) 1308, 2332
MspCI CTTAAG 2 cut(s) 1604, 1625
MspI CCGG 1 cut(s) 1259
MspR9I CCNGG 5 cut(s) 660, 2088, 2244, 2682, 2777
MvaI CCWGG 5 cut(s) 660, 2088, 2244, 2682, 2777
MvnI CGCG 1 cut(s) 703
MwoI GCNNNNNNNGC 6 cut(s) 225, 234, 941, 1346, 1372, 2285
NaeI GCCGGC 1 cut(s) 1260
NcoI CCATGG 1 cut(s) 488
NdeI CATATG 1 cut(s) 2893
NdeII GATC 7 cut(s) 373, 706, 1084, 1180, 1640, 1851, 2513
NgoMIV GCCGGC 1 cut(s) 1258
NlaIV GGNNCC 1 cut(s) 2548
NmuCI GTSAC 2 cut(s) 395, 1937
NspI RCATGY 4 cut(s) 929, 1289, 1307, 1370
PaeI GCATGC 2 cut(s) 929, 1370
PaeR7I CTCGAG 1 cut(s) 1796
PceI AGGCCT 3 cut(s) 340, 1135, 2770
PciSI GCTCTTC 1 cut(s) 1673
PdiI GCCGGC 1 cut(s) 1260
PfeI GAWTC 6 cut(s) 128, 428, 788, 1058, 1526, 2671
PflMI CCANNNNNTGG 1 cut(s) 1574
PfoI TCCNGGA 2 cut(s) 2242, 2775
PleI GAGTC 6 cut(s) 790, 832, 1021, 1309, 1394, 1540
PpsI GAGTC 6 cut(s) 790, 832, 1021, 1309, 1394, 1540
Ppu21I YACGTR 3 cut(s) 195, 1115, 1355
PpuMI RGGWCCY 1 cut(s) 1490
Psp124BI GAGCTC 1 cut(s) 697
Psp5II RGGWCCY 1 cut(s) 1490
Psp6I CCWGG 5 cut(s) 658, 2086, 2242, 2680, 2775
PspFI CCCAGC 2 cut(s) 1887, 2288
PspGI CCWGG 5 cut(s) 658, 2086, 2242, 2680, 2775
PspN4I GGNNCC 1 cut(s) 2548
PspPI GGNCC 6 cut(s) 1103, 1348, 1490, 1822, 2237, 2879
PspPPI RGGWCCY 1 cut(s) 1490
PstI CTGCAG 1 cut(s) 1950
PstNI CAGNNNCTG 5 cut(s) 80, 665, 1031, 1493, 2288
PsuI RGATCY 1 cut(s) 706
RsaI GTAC 3 cut(s) 817, 1713, 2082
RsaNI GTAC 3 cut(s) 816, 1712, 2081
RseI CAYNNNNRTG 2 cut(s) 1308, 2332
SacI GAGCTC 1 cut(s) 697
SapI GCTCTTC 1 cut(s) 1673
SaqAI TTAA 9 cut(s) 390, 459, 1455, 1502, 1605, 1626, 1932, 2831, 2841
Sau3AI GATC 7 cut(s) 373, 706, 1084, 1180, 1640, 1851, 2513
Sau96I GGNCC 6 cut(s) 1103, 1348, 1490, 1822, 2237, 2879
SchI GAGTC 6 cut(s) 791, 833, 1022, 1309, 1394, 1541
ScrFI CCNGG 5 cut(s) 660, 2088, 2244, 2682, 2777
SduI GDGCHC 3 cut(s) 697, 2125, 2440
SexAI ACCWGGT 1 cut(s) 2680
SfaNI GCATC 6 cut(s) 88, 337, 838, 2335, 2566, 2887
SfcI CTRYAG 1 cut(s) 1946
Sfr274I CTCGAG 1 cut(s) 1796
SinI GGWCC 4 cut(s) 1103, 1490, 1822, 2237
SlaI CTCGAG 1 cut(s) 1796
SmiMI CAYNNNNRTG 2 cut(s) 1308, 2332
SmlI CTYRAG 5 cut(s) 947, 1604, 1625, 1796, 2664
SmoI CTYRAG 5 cut(s) 947, 1604, 1625, 1796, 2664
SpeI ACTAGT 2 cut(s) 872, 2155
SphI GCATGC 2 cut(s) 929, 1370
SseBI AGGCCT 3 cut(s) 340, 1135, 2770
SsiI CCGC 3 cut(s) 633, 1066, 2209
SspMI CTAG 9 cut(s) 102, 324, 444, 698, 873, 1419, 2156, 2469, 2675
SstI GAGCTC 1 cut(s) 697
StuI AGGCCT 3 cut(s) 340, 1135, 2770
StyD4I CCNGG 5 cut(s) 658, 2086, 2242, 2680, 2775
StyI CCWWGG 4 cut(s) 488, 2268, 2799, 2871
TaaI ACNGT 8 cut(s) 12, 76, 267, 505, 677, 1847, 2525, 2942
TaiI ACGT 6 cut(s) 70, 197, 1117, 1156, 1357, 1987
TaqI TCGA 6 cut(s) 411, 534, 1183, 1299, 1797, 2412
TatI WGTACW 1 cut(s) 815
TauI GCSGC 2 cut(s) 1069, 2212
TfiI GAWTC 6 cut(s) 128, 428, 788, 1058, 1526, 2671
Tru1I TTAA 9 cut(s) 390, 459, 1455, 1502, 1605, 1626, 1932, 2831, 2841
Tru9I TTAA 9 cut(s) 390, 459, 1455, 1502, 1605, 1626, 1932, 2831, 2841
TscAI CASTG 6 cut(s) 175, 279, 670, 745, 1077, 2737
TseFI GTSAC 2 cut(s) 395, 1937
Tsp45I GTSAC 2 cut(s) 395, 1937
TspGWI ACGGA 2 cut(s) 575, 794
TspRI CASTG 6 cut(s) 175, 279, 670, 745, 1077, 2737
Van91I CCANNNNNTGG 1 cut(s) 1574
Vha464I CTTAAG 2 cut(s) 1604, 1625
VpaK11BI GGWCC 4 cut(s) 1103, 1490, 1822, 2237
XagI CCTNNNNNAGG 3 cut(s) 1355, 2042, 2217
XapI RAATTY 5 cut(s) 1470, 1550, 1570, 2026, 2532
XbaI TCTAGA 1 cut(s) 2674
XceI RCATGY 4 cut(s) 929, 1289, 1307, 1370
XcmI CCANNNNNNNNNTGG 1 cut(s) 1275
XhoI CTCGAG 1 cut(s) 1796
XspI CTAG 9 cut(s) 102, 324, 444, 698, 873, 1419, 2156, 2469, 2675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.