Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006369

Physical Location & Seq

Genomic Coordinates Forward (+)

1551817 .. 1556157

Gene Structure 4341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g02610.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGCCTTCACCTTCCTCTCAATCCCTCACTTTCTCTCTCCTCAGCCCCACTTTCTCTCTCTAAAACCCCAATTCGCCGCCCTCCGACCCTCCCTCTCTCCCCGCCCACTCAAACCCCTCCACGCAATCGGCCCGGACGGCAAGTACTACCCGGACCCCTCCGACGACGACCCGCCGGAAGCCCCGGAGGACTCCGGCCACGGCGTCTCGAAATTCCAGCAAATCCAGCGCCAGGCCTCCCGCCACCAGAAGCTCCAGGAGGCCGACTTCAAGAAGCACCAGAACACCATGCTCTCCGCCATCGCCGACGTCGAGGATCCGCCGGAGGGTCCCGCCGGAGCTGAACCTAGCTCCGGCGACGACCTGTTCGGCGACATCGACCAGGCTATTGCCTTGAAGCGGAAGGAGTTTGTGAAGCAAGGGCTGTTGAAGCCGAACCGTAAGGCGGAGGCGGCGGCGGAGGAGCTGGAGGCGGAGGAGGTGGTGGACTTGGAGGAGATCGATGCGCTTCAGGGGCTCCGGGTTGTTAGTGAGGATTCGGAGGAGGAAGGAGGAGCGAAATTGGATTCAAATGTGAGTGATTTGGATGAACAAGTTTCGGTTTCGAGTTCTTTGTTTGATATGGATTTTGATAATTATGGTAAAACTAGAGCTAGAATAGTGGAGCCGAAGTTTAAAATGAGCTTAGCTGAGCTGTTGGATGAAAGTAAAGTTGTGCCGATTTCGGTGTATGGTGATTTAGAGGTGGAGATAACCGGAATTCAGCATGATTCGAGGGTGGTTAGCGCCGGGGATTTGTTTGTGTGCTGTGTTGGGAGAAATACCGATGGTCATTTGTATTTGAGTGAGGCTATTAAGAGGGGAGCTGTTGCTGTTGTAGCTAGTAAGGAGATATATATGGAGGAGAGTTTGGGGTGCAAGGCATTGGTCATTGTGGAGGATACCAATGCTGATTTGCCGGCATTGGCTGCGTCGTTTTATAGGCATCCGTCGAAGAATATGTCTGTGATTGGGATAACGGGGACGAATGGGAAGACTACGTCTGCGTATTTGATAAAGGGGATGTATGAAGCGATGGGGTTGAGGACAGGGATGTTGAGCACGGTTGCATATTATGTACATGGAGATAACAAGCTGGACTCGCCTGATACGACTCCCGATGCTGTTATGGTTCAAAATATGATGGCCAAGATGCTCCATAATGGGGCAGAAGCAGTTGTCATGGAGGCGACTTCTCATGCGCTAGCTCTGTCTAGGTGTGATGAAGTTGATATTGACATAGCGGTTTTCACAAATTTGACGAGGGACCATTTGGATTTTCATGTGACTGAGGAGGAGTATAGGGAGGCAAAGGGAAAGTTGTTTTCAAGGATGGTTGATCCAGAACGGCATAGGAAAATTGTCAACATTGATGACCCTAATGCACCGTTCTTCATTTCACAAGGGAACCCGGATGTTCCAGTTGTGACCTTTGCCATGGAGAATAAGAACGCAGATGTCTATCCCTTGAAGTTTGAACTTTCCTTGTTTGAGACACAGGTTTTAGTCAATACTCCCAATGGTATATTGGAGATATCATCAGGGTTGCTTGGACGGCATAACATTTACAATATACTGGCTGCAGTAGCAGTTGGGATTGCAGTTGGGGCACCATTAGAAGACATTGTTAGGGGAATTGAAGAGGTTGATGCTGTTCCAGGGAGGTGTGAGTTGATAGACGAGGAACAGGCGTTTGGAGTGATTGTGGATTATGCTCACACTCCTGATGCCTTGTCTAGGCTACTGGATTCTGTACGGGAGCTTGGTACAAGGAGAATTATAACCGTAATCGGTTGTCCTGGGGAGAGTGACAGAGGAAAAAGACCAATGATGGCGAAAATTGCAACAGATAAAAGTGATGTGACAATACTGACGTCTGACAATCCAAAGAATGAAGATCCATTGGACATCTTGGATGATATGCTGTCTGGGATAGGATGGACAATGCAGGAGTACTTGAAACATGGCGAGCATGATTACTACCCACCTCTTCCAAATGGTCATAGGATTTTCCTGCATGATATAAGACGAGTGGCCGTACGGTGTGCTGTTGCCATGGGTGAGGAAGGTGACGTGGTTGTTGTTGCCGGTAAAGGCCATGAAGCGTATCAGATAGAAGGTGACAAAAAAGAGTTCTTCGATGACAGGGAAGAGTGTCGAGAGGCATTGCAGTATGTTGATGAGCTTCACCAAGCTGGAATTGACACAAGTGAATTCCCATGGAGGTTACCTGAGAGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009295 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0010468 GO:0016043 GO:0019222 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044424 GO:0044444 GO:0044464 GO:0048285 GO:0050789 GO:0060255 GO:0065007 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mur_ligase Mur_ligase_C Mur_ligase_M

Protein Analysis

761

Amino Acids

83.75

Weight (kDa)

4.74

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mur_ligase	PF01225	250 - 312	6.2e-08	Mur ligase family, catalytic domain
Mur_ligase_M	PF08245	339 - 544	3.5e-54	Mur ligase middle domain
Mur_ligase_C	PF02875	567 - 712	1.8e-25	Mur ligase, glutamate ligase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63680 AT1G63680 AT1G63680
fragaria_vesca	FvH4_5g02610 FvH4_5g02610 FvH4_5g02610 FvH4_5g02610
malus_domestica	MD06G1085100.v1.1 MD14G1106100.v1.1 MD14G1106300.v1.1
prunus_persica	Prupe.5G101100_v2.0.a1
pyrus_communis	pycom06g08120
rosa_chinensis	RchiOBHm_Chr7g0197491
rosa_laevigata	RLG00000003936 RLG00000003970
rosa_multiflora	Rmu_co8124254.1_g000001 Rmu_co8184758.1_g000001 Rmu_sc0002167.1_g000003 Rmu_sc0013361.1_g000005
rosa_roxburghii	Rroxscaffold_3G00258420
rosa_rugosa	Rorug07G0040000 Rorug07G0040100
rosa_samantha	Rh7AG165200 Rh7BG167300 Rh7CG173700 Rh7DG166600
rosa_wichuraiana	Rw7G014400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1820
AatII	GACGTC	2 cut(s)	312, 1916
AccB1I	GGYRCC	1 cut(s)	1648
AclWI	GGATC	4 cut(s)	311, 324, 1373, 1931
AcoI	YGGCCR	3 cut(s)	196, 1185, 2073
AcsI	RAATTY	4 cut(s)	212, 759, 1294, 2252
AcuI	CTGAAG	1 cut(s)	494
AcyI	GRCGYC	3 cut(s)	204, 309, 1913
AfaI	GTAC	6 cut(s)	146, 1119, 1794, 1807, 1994, 2079
AfiI	CCNNNNNNNGG	7 cut(s)	232, 326, 353, 399, 445, 1204, 1776
AjiI	CACGTC	1 cut(s)	2113
AjnI	CCWGG	5 cut(s)	231, 255, 381, 1696, 1837
AjuI	GAANNNNNNNTTGG	2 cut(s)	1716, 1748
Alw21I	GWGCWC	1 cut(s)	1103
Alw26I	GTCTC	2 cut(s)	211, 1526
AlwI	GGATC	4 cut(s)	311, 324, 1373, 1931
AoxI	GGCC	8 cut(s)	3, 130, 196, 234, 261, 1185, 2073, 2134
ApeKI	GCWGC	2 cut(s)	968, 1619
ApoI	RAATTY	4 cut(s)	212, 759, 1294, 2252
ArsI	GACNNNNNNTTYG	4 cut(s)	350, 382, 986, 1018
AspLEI	GCGC	4 cut(s)	231, 508, 788, 1243
AspS9I	GGNCC	4 cut(s)	131, 154, 329, 1306
AsuC2I	CCSGG	6 cut(s)	134, 152, 185, 521, 790, 1451
AsuHPI	GGTGA	5 cut(s)	746, 2111, 2120, 2171, 2219
AsuNHI	GCTAGC	1 cut(s)	1243
AvaII	GGWCC	3 cut(s)	154, 329, 1306
BaeGI	GKGCMC	1 cut(s)	1651
BalI	TGGCCA	1 cut(s)	1187
BamHI	GGATCC	1 cut(s)	316
BanI	GGYRCC	1 cut(s)	1648
BanII	GRGCYC	1 cut(s)	519
BbsI	GAAGAC	2 cut(s)	1040, 1665
Bbv12I	GWGCWC	1 cut(s)	1103
BbvCI	CCTCAGC	1 cut(s)	42
BbvI	GCAGC	2 cut(s)	955, 1606
BccI	CCATC	7 cut(s)	308, 821, 1069, 1177, 1366, 1864, 1971
BceAI	ACGGC	5 cut(s)	154, 217, 1403, 1610, 2060
BciT130I	CCWGG	5 cut(s)	233, 257, 383, 1698, 1839
BciVI	GTATCC	1 cut(s)	934
BcnI	CCSGG	6 cut(s)	134, 152, 185, 521, 790, 1451
BcoDI	GTCTC	2 cut(s)	211, 1526
BfaI	CTAG	7 cut(s)	348, 648, 654, 882, 1244, 1254, 1776
BfmI	CTRYAG	1 cut(s)	1620
BfoI	RGCGCY	2 cut(s)	232, 789
BfuI	GTATCC	1 cut(s)	934
BglI	GCCNNNNNGGC	1 cut(s)	138
BisI	GCNGC	5 cut(s)	78, 453, 456, 969, 1620
BlpI	GCTNAGC	2 cut(s)	685, 690
BlsI	GCNGC	5 cut(s)	79, 454, 457, 970, 1621
BmcAI	AGTACT	2 cut(s)	146, 1994
Bme18I	GGWCC	3 cut(s)	154, 329, 1306
BmgBI	CACGTC	1 cut(s)	2113
BmgT120I	GGNCC	4 cut(s)	131, 154, 329, 1306
BmiI	GGNNCC	9 cut(s)	156, 318, 330, 331, 518, 666, 1307, 1448, 1650
BmsI	GCATC	6 cut(s)	493, 994, 1150, 1182, 1678, 1756
BmtI	GCTAGC	1 cut(s)	1247
BpiI	GAAGAC	2 cut(s)	1040, 1665
BpmI	CTGGAG	2 cut(s)	239, 488
Bpu10I	CCTNAGC	1 cut(s)	42
Bpu1102I	GCTNAGC	2 cut(s)	685, 690
BpuMI	CCSGG	6 cut(s)	134, 152, 185, 521, 790, 1451
Bsa29I	ATCGAT	1 cut(s)	501
BsaBI	GATNNNNATC	1 cut(s)	1500
BsaHI	GRCGYC	3 cut(s)	204, 309, 1913
BsaJI	CCNNGG	8 cut(s)	183, 199, 789, 1476, 1697, 1838, 2094, 2258
BsaWI	WCCGGW	1 cut(s)	755
BsaXI	ACNNNNNCTCC	4 cut(s)	656, 686, 1728, 1758
Bsc4I	CCNNNNNNNGG	7 cut(s)	232, 326, 353, 399, 445, 1204, 1776
Bse118I	RCCGGY	2 cut(s)	958, 2126
Bse1I	ACTGG	3 cut(s)	1460, 1620, 1788
Bse3DI	GCAATG	1 cut(s)	2204
Bse8I	GATNNNNATC	1 cut(s)	1500
BseBI	CCWGG	5 cut(s)	233, 257, 383, 1698, 1839
BseCI	ATCGAT	1 cut(s)	501
BseDI	CCNNGG	8 cut(s)	183, 199, 789, 1476, 1697, 1838, 2094, 2258
BseGI	GGATG	9 cut(s)	592, 706, 985, 1068, 1098, 1377, 1459, 1960, 1982
BseJI	GATNNNNATC	1 cut(s)	1500
BseLI	CCNNNNNNNGG	7 cut(s)	232, 326, 353, 399, 445, 1204, 1776
BseMI	GCAATG	1 cut(s)	2204
BseMII	CTCAG	4 cut(s)	56, 681, 1320, 2262
BseNI	ACTGG	3 cut(s)	1460, 1620, 1788
BseRI	GAGGAG	9 cut(s)	30, 476, 491, 509, 557, 567, 917, 1346, 1349
BseSI	GKGCMC	1 cut(s)	1651
BseXI	GCAGC	2 cut(s)	955, 1606
BshFI	GGCC	8 cut(s)	5, 132, 198, 236, 263, 1187, 2075, 2136
BshNI	GGYRCC	1 cut(s)	1648
BshVI	ATCGAT	1 cut(s)	501
BsiHKAI	GWGCWC	1 cut(s)	1103
BsiWI	CGTACG	1 cut(s)	2077
BslFI	GGGAC	3 cut(s)	315, 1036, 1319
BslI	CCNNNNNNNGG	7 cut(s)	232, 326, 353, 399, 445, 1204, 1776
BsmAI	GTCTC	2 cut(s)	211, 1526
BsmBI	CGTCTC	1 cut(s)	211
BsmFI	GGGAC	3 cut(s)	315, 1036, 1319
BsnI	GGCC	8 cut(s)	5, 132, 198, 236, 263, 1187, 2075, 2136
Bsp1286I	GDGCHC	3 cut(s)	519, 1103, 1651
Bsp1407I	TGTACA	1 cut(s)	1117
Bsp143I	GATC	4 cut(s)	316, 498, 1378, 1936
Bsp1720I	GCTNAGC	2 cut(s)	685, 690
Bsp19I	CCATGG	3 cut(s)	1476, 2094, 2258
BspANI	GGCC	8 cut(s)	5, 132, 198, 236, 263, 1187, 2075, 2136
BspCNI	CTCAG	4 cut(s)	55, 682, 1321, 2263
BspDI	ATCGAT	1 cut(s)	501
BspLI	GGNNCC	9 cut(s)	156, 318, 330, 331, 518, 666, 1307, 1448, 1650
BspMAI	CTGCAG	1 cut(s)	1624
BspOI	GCTAGC	1 cut(s)	1247
BspPI	GGATC	4 cut(s)	311, 324, 1373, 1931
BspT107I	GGYRCC	1 cut(s)	1648
BsrDI	GCAATG	1 cut(s)	2204
BsrFI	RCCGGY	2 cut(s)	958, 2126
BsrGI	TGTACA	1 cut(s)	1117
BsrI	ACTGG	3 cut(s)	1460, 1620, 1788
BssAI	RCCGGY	2 cut(s)	958, 2126
BssECI	CCNNGG	8 cut(s)	183, 199, 789, 1476, 1697, 1838, 2094, 2258
BssMI	GATC	4 cut(s)	316, 498, 1378, 1936
BssNI	GRCGYC	3 cut(s)	204, 309, 1913
BssT1I	CCWWGG	3 cut(s)	1476, 2094, 2258
Bst2UI	CCWGG	5 cut(s)	233, 257, 383, 1698, 1839
Bst4CI	ACNGT	5 cut(s)	440, 1105, 1428, 1825, 2082
Bst6I	CTCTTC	3 cut(s)	1674, 2034, 2184
BstACI	GRCGYC	3 cut(s)	204, 309, 1913
BstAPI	GCANNNNNTGC	1 cut(s)	968
BstAUI	TGTACA	1 cut(s)	1117
BstC8I	GCNNGC	3 cut(s)	960, 1245, 2009
BstDEI	CTNAG	5 cut(s)	42, 685, 690, 1329, 2271
BstDSI	CCRYGG	4 cut(s)	199, 1476, 2094, 2258
BstEII	GGTNACC	1 cut(s)	2265
BstENI	CCTNNNNNAGG	1 cut(s)	1774
BstF5I	GGATG	9 cut(s)	592, 706, 985, 1068, 1098, 1377, 1459, 1960, 1982
BstH2I	RGCGCY	2 cut(s)	232, 789
BstHHI	GCGC	4 cut(s)	231, 508, 788, 1243
BstKTI	GATC	4 cut(s)	319, 501, 1381, 1939
BstMAI	GTCTC	2 cut(s)	211, 1526
BstMBI	GATC	4 cut(s)	316, 498, 1378, 1936
BstNI	CCWGG	5 cut(s)	233, 257, 383, 1698, 1839
BstPI	GGTNACC	1 cut(s)	2265
BstSFI	CTRYAG	1 cut(s)	1620
BstSLI	GKGCMC	1 cut(s)	1651
BstV1I	GCAGC	2 cut(s)	955, 1606
BstV2I	GAAGAC	2 cut(s)	1040, 1665
BstX2I	RGATCY	2 cut(s)	316, 1936
BstYI	RGATCY	2 cut(s)	316, 1936
Bsu15I	ATCGAT	1 cut(s)	501
BsuI	GTATCC	1 cut(s)	934
BsuRI	GGCC	8 cut(s)	5, 132, 198, 236, 263, 1187, 2075, 2136
BsuTUI	ATCGAT	1 cut(s)	501
BtgI	CCRYGG	4 cut(s)	199, 1476, 2094, 2258
BtgZI	GCGATG	2 cut(s)	286, 1088
BtrI	CACGTC	1 cut(s)	2113
BtsCI	GGATG	9 cut(s)	592, 706, 985, 1068, 1098, 1377, 1459, 1960, 1982
Cac8I	GCNNGC	3 cut(s)	960, 1245, 2009
CfoI	GCGC	4 cut(s)	231, 508, 788, 1243
Cfr10I	RCCGGY	2 cut(s)	958, 2126
Cfr13I	GGNCC	4 cut(s)	131, 154, 329, 1306
ClaI	ATCGAT	1 cut(s)	501
CseI	GACGC	2 cut(s)	193, 960
Csp6I	GTAC	6 cut(s)	145, 1118, 1793, 1806, 1993, 2078
CviQI	GTAC	6 cut(s)	145, 1118, 1793, 1806, 1993, 2078
DdeI	CTNAG	5 cut(s)	42, 685, 690, 1329, 2271
DpnI	GATC	4 cut(s)	318, 500, 1380, 1938
DpnII	GATC	4 cut(s)	316, 498, 1378, 1936
DraI	TTTAAA	1 cut(s)	676
EaeI	YGGCCR	3 cut(s)	196, 1185, 2073
Eam1104I	CTCTTC	3 cut(s)	1674, 2034, 2184
EarI	CTCTTC	3 cut(s)	1674, 2034, 2184
EciI	GGCGGA	5 cut(s)	286, 309, 461, 473, 488
Eco130I	CCWWGG	3 cut(s)	1476, 2094, 2258
Eco147I	AGGCCT	1 cut(s)	236
Eco24I	GRGCYC	1 cut(s)	519
Eco32I	GATATC	1 cut(s)	1575
Eco47I	GGWCC	3 cut(s)	154, 329, 1306
Eco57I	CTGAAG	1 cut(s)	494
Eco91I	GGTNACC	1 cut(s)	2265
EcoNI	CCTNNNNNAGG	1 cut(s)	1774
EcoO109I	RGGNCCY	1 cut(s)	329
EcoO65I	GGTNACC	1 cut(s)	2265
EcoRI	GAATTC	2 cut(s)	759, 2252
EcoRII	CCWGG	5 cut(s)	231, 255, 381, 1696, 1837
EcoRV	GATATC	1 cut(s)	1575
EcoT14I	CCWWGG	3 cut(s)	1476, 2094, 2258
EcoT38I	GRGCYC	1 cut(s)	519
ErhI	CCWWGG	3 cut(s)	1476, 2094, 2258
Esp3I	CGTCTC	1 cut(s)	211
FaqI	GGGAC	3 cut(s)	315, 1036, 1319
FauI	CCCGC	4 cut(s)	110, 180, 248, 340
Fnu4HI	GCNGC	5 cut(s)	78, 453, 456, 969, 1620
FokI	GGATG	9 cut(s)	599, 713, 972, 1075, 1105, 1384, 1466, 1967, 1989
FriOI	GRGCYC	1 cut(s)	519
Fsp4HI	GCNGC	5 cut(s)	78, 453, 456, 969, 1620
FspBI	CTAG	7 cut(s)	348, 648, 654, 882, 1244, 1254, 1776
GlaI	GCGC	4 cut(s)	230, 507, 787, 1242
GluI	GCNGC	5 cut(s)	78, 453, 456, 969, 1620
GsuI	CTGGAG	2 cut(s)	239, 488
HaeII	RGCGCY	2 cut(s)	232, 789
HaeIII	GGCC	8 cut(s)	5, 132, 198, 236, 263, 1187, 2075, 2136
HgaI	GACGC	2 cut(s)	193, 960
HhaI	GCGC	4 cut(s)	231, 508, 788, 1243
Hin1I	GRCGYC	3 cut(s)	204, 309, 1913
Hin6I	GCGC	4 cut(s)	229, 506, 786, 1241
HinP1I	GCGC	4 cut(s)	229, 506, 786, 1241
HincII	GTYRAC	1 cut(s)	1405
HindII	GTYRAC	1 cut(s)	1405
HinfI	GANTC	8 cut(s)	191, 536, 566, 770, 1139, 1153, 1787, 2275
HphI	GGTGA	5 cut(s)	746, 2111, 2120, 2171, 2219
Hpy166II	GTNNAC	2 cut(s)	487, 1405
Hpy188I	TCNGA	5 cut(s)	86, 163, 541, 1918, 2151
Hpy188III	TCNNGA	6 cut(s)	208, 271, 1157, 1382, 1763, 2198
Hpy8I	GTNNAC	2 cut(s)	487, 1405
Hpy99I	CGWCG	7 cut(s)	167, 170, 311, 314, 362, 976, 994
HpyAV	CCTTC	6 cut(s)	16, 22, 397, 542, 2099, 2150
HpyCH4III	ACNGT	5 cut(s)	440, 1105, 1428, 1825, 2082
HpyCH4IV	ACGT	4 cut(s)	309, 1040, 1913, 2112
HpyCH4V	TGCA	9 cut(s)	918, 1109, 1424, 1622, 1640, 1883, 1987, 2056, 2209
HpyF3I	CTNAG	5 cut(s)	42, 685, 690, 1329, 2271
HpySE526I	ACGT	4 cut(s)	309, 1040, 1913, 2112
Hsp92I	GRCGYC	3 cut(s)	204, 309, 1913
HspAI	GCGC	4 cut(s)	229, 506, 786, 1241
KflI	GGGWCCC	1 cut(s)	329
KroI	GCCGGC	1 cut(s)	958
KroNI	GCCGGC	1 cut(s)	960
Kzo9I	GATC	4 cut(s)	316, 498, 1378, 1936
Lsp1109I	GCAGC	2 cut(s)	955, 1606
LweI	GCATC	6 cut(s)	493, 994, 1150, 1182, 1678, 1756
MaeI	CTAG	7 cut(s)	348, 648, 654, 882, 1244, 1254, 1776
MaeII	ACGT	4 cut(s)	309, 1040, 1913, 2112
MaeIII	GTNAC	7 cut(s)	1324, 1465, 1847, 1900, 2108, 2159, 2265
MalI	GATC	4 cut(s)	318, 500, 1380, 1938
MboI	GATC	4 cut(s)	316, 498, 1378, 1936
MboII	GAAGA	9 cut(s)	1006, 1045, 1423, 1670, 1691, 1946, 2021, 2167, 2201
MflI	RGATCY	2 cut(s)	316, 1936
MhlI	GDGCHC	3 cut(s)	519, 1103, 1651
MlsI	TGGCCA	1 cut(s)	1187
MluNI	TGGCCA	1 cut(s)	1187
MlyI	GAGTC	3 cut(s)	185, 1133, 1147
MmeI	TCCRAC	3 cut(s)	109, 186, 678
Mox20I	TGGCCA	1 cut(s)	1187
MroNI	GCCGGC	1 cut(s)	958
MscI	TGGCCA	1 cut(s)	1187
MseI	TTAA	2 cut(s)	675, 855
Msp20I	TGGCCA	1 cut(s)	1187
MvaI	CCWGG	5 cut(s)	233, 257, 383, 1698, 1839
NaeI	GCCGGC	1 cut(s)	960
NciI	CCSGG	6 cut(s)	134, 152, 185, 521, 790, 1451
NcoI	CCATGG	3 cut(s)	1476, 2094, 2258
NdeII	GATC	4 cut(s)	316, 498, 1378, 1936
NgoMIV	GCCGGC	1 cut(s)	958
NheI	GCTAGC	1 cut(s)	1243
NlaIV	GGNNCC	9 cut(s)	156, 318, 330, 331, 518, 666, 1307, 1448, 1650
NmuCI	GTSAC	6 cut(s)	1324, 1465, 1847, 1900, 2108, 2159
PceI	AGGCCT	1 cut(s)	236
PcsI	WCGNNNNNNNCGW	3 cut(s)	309, 375, 1148
PdiI	GCCGGC	1 cut(s)	960
PfeI	GAWTC	4 cut(s)	536, 566, 770, 1787
Pfl23II	CGTACG	1 cut(s)	2077
PflFI	GACNNNGTC	1 cut(s)	1039
PfoI	TCCNGGA	1 cut(s)	255
PkrI	GCNGC	5 cut(s)	79, 454, 457, 970, 1621
PleI	GAGTC	3 cut(s)	185, 1133, 1147
PpsI	GAGTC	3 cut(s)	185, 1133, 1147
PpuMI	RGGWCCY	1 cut(s)	329
PsiI	TTATAA	1 cut(s)	1820
Psp5II	RGGWCCY	1 cut(s)	329
Psp6I	CCWGG	5 cut(s)	231, 255, 381, 1696, 1837
PspEI	GGTNACC	1 cut(s)	2265
PspGI	CCWGG	5 cut(s)	231, 255, 381, 1696, 1837
PspLI	CGTACG	1 cut(s)	2077
PspN4I	GGNNCC	9 cut(s)	156, 318, 330, 331, 518, 666, 1307, 1448, 1650
PspPI	GGNCC	4 cut(s)	131, 154, 329, 1306
PspPPI	RGGWCCY	1 cut(s)	329
PstI	CTGCAG	1 cut(s)	1624
PsuI	RGATCY	2 cut(s)	316, 1936
PsyI	GACNNNGTC	1 cut(s)	1039
RsaI	GTAC	6 cut(s)	146, 1119, 1794, 1807, 1994, 2079
RsaNI	GTAC	6 cut(s)	145, 1118, 1793, 1806, 1993, 2078
SaqAI	TTAA	2 cut(s)	675, 855
SatI	GCNGC	5 cut(s)	78, 453, 456, 969, 1620
Sau3AI	GATC	4 cut(s)	316, 498, 1378, 1936
Sau96I	GGNCC	4 cut(s)	131, 154, 329, 1306
ScaI	AGTACT	2 cut(s)	146, 1994
SchI	GAGTC	3 cut(s)	185, 1133, 1147
SduI	GDGCHC	3 cut(s)	519, 1103, 1651
SfaNI	GCATC	6 cut(s)	493, 994, 1150, 1182, 1678, 1756
SfcI	CTRYAG	1 cut(s)	1620
SinI	GGWCC	3 cut(s)	154, 329, 1306
SseBI	AGGCCT	1 cut(s)	236
SspMI	CTAG	7 cut(s)	348, 648, 654, 882, 1244, 1254, 1776
StuI	AGGCCT	1 cut(s)	236
StyI	CCWWGG	3 cut(s)	1476, 2094, 2258
TaaI	ACNGT	5 cut(s)	440, 1105, 1428, 1825, 2082
TaiI	ACGT	4 cut(s)	312, 1043, 1916, 2115
TaqI	TCGA	9 cut(s)	209, 312, 378, 501, 605, 773, 992, 2178, 2197
TatI	WGTACW	3 cut(s)	144, 1117, 1992
TauI	GCSGC	3 cut(s)	80, 455, 458
TfiI	GAWTC	4 cut(s)	536, 566, 770, 1787
Tru1I	TTAA	2 cut(s)	675, 855
Tru9I	TTAA	2 cut(s)	675, 855
TseFI	GTSAC	6 cut(s)	1324, 1465, 1847, 1900, 2108, 2159
TseI	GCWGC	2 cut(s)	968, 1619
Tsp45I	GTSAC	6 cut(s)	1324, 1465, 1847, 1900, 2108, 2159
TspDTI	ATGAA	8 cut(s)	603, 717, 1083, 1278, 1310, 1423, 1947, 2154
TspGWI	ACGGA	1 cut(s)	978
Tth111I	GACNNNGTC	1 cut(s)	1039
VpaK11BI	GGWCC	3 cut(s)	154, 329, 1306
XagI	CCTNNNNNAGG	1 cut(s)	1774
XapI	RAATTY	4 cut(s)	212, 759, 1294, 2252
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1564
XspI	CTAG	7 cut(s)	348, 648, 654, 882, 1244, 1254, 1776
ZraI	GACGTC	2 cut(s)	310, 1914
ZrmI	AGTACT	2 cut(s)	146, 1994

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.