Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006369

Physical Location & Seq

Genomic Coordinates Forward (+)

54442715 .. 54446895

Gene Structure 4181 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003936

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGCACCCAAGACTTCCACCACCCTCACCGTTCCGGAACCACCGCGCATCCACGCCACCCCCTCCCTCAGAAGAAGCCGCCTCCAACATTCCAAAAAATTTGGGGCCCAAACATTTTACAGTCCTTGTCCGGCCCAAATTCTCAAAGAAGCCCAAAACAAACCAAAATGGAAAGTCCGACCCAAAAGACTTTACCCGCCACAGGCCAGCAACAAACCTCCCTCTATCCAAAATCTTAAACCTCTTCCTCTCTGCAACTTCACTCTCTCAGTCTCTAATGGCCTTCACTTTCCTCTCAATCCCTCACTTTCTCTCTCCCCAACCCAACTTTCTCTCTCTGAAACCCCAATTCGCCTCTCTCCGACCCTCCATCCTCCCTCTCCCTCCCCGCCCACTCAAACCCGCCCACGCAATCGGGCCCGACGGCAAGTACTACCCGGACCCCTCCGACGACGACCCGCCCGAAGCCCCCGAAGACTCCGGCCACGGCGTCTCTAAATTCCAGCAAATCCAGCGCCAGGCCTCCCGCCACCAGAAGCTCCAGGAGGACGACTTCAAGAAGCACCAGAACACCATGCTCTCCGCCATTGCTGACGTCGAGGACCCGCCGGAGAACCCCGGCTCCGGAAATACCCCCAGCTCCGGGGACGATTTGTTCGGCGACATCGACGAAGCTATTGCCTTGAAGCGCAAGGAGTTTGTGAAGCAAGGGCTTTTGAAGCCGAACCCTAAGGTGGAGGCTGTGGAGGAGCTGGAGCCGGAGGAGGTTGTGGACTTGGAGGAGATTGATGAACTTCAGGGGCTGGCGATTGTGAGTGAGGATTCGGATGAGGAAGGGACTGAGAAATTCGACTCAAAGGTTAGTGATTTGGATGAGAAAGATGGAGTTTCGGTTTCGACTTCTTTGTTTGATATGGATTTTGATAATTATGGTAAGACTAGGGCTAGAATTGTGGAGCCTAAGTTTAAAATGAGCTTAGCTGAGCTTTTGGATGAGAGTAAAGTTGTGCCGATTTCGGTTTATGGTGATTTAGAGGTGGAGATAACCGGAATTCAGCATGATTCGAGGGTGGTTAGTGCCGGGGATTTGTTTGTGTGCTGTGTTGGGAGTAAAACCGATGGTCATTTGTATTTGAGTGAGGCTATTAAGAGAGGAGCGGTGGCTGTAGTAGCTAGTAAGGAGATATACATGGAGGAAAGCTTGGGGTGCAAGGCATTGGTCATTGTGGAAGATACCAATGCTGATTTACCGGCATTGGCTGCGTCGTTTTATAGGTATCCGTCGAAGAATATGTCGGTGATTGGGATAACAGGGACGAATGGGAAGACGACGTCAGCGTATTTGATTAAGGGGATGTATGAAGCGATGGGATTGAGGACGGGTATGTTGAGCACAGTTGCGTATTATGTACATGGAGATAATAAGTTGGAGTCGCCTAATACAACCCCGGATGCTGTTTTGGTTCAAAATATGATGGCCAAGATGTTCCATAATGGGGCTGAAGCAGTTGTCATGGAGGCTTCTTCTCACGGGCTAGCTCTGTCTAGGTGTGATGAAGTTGATATTGACATAGCGGTTTTTACAAATTTGACGAGAGACCATTTGGATTTTCACGTGACTGAGGAGGAGTATAGGGAGGCAAAGGGTAAGTTGTTTTCAAGGATGGTTGATCCAGAACGGCACAGGAAAGTTGTCAACATTGATGACCCAAATGCACCTTTCTTCATTTCACAGGGGAACCCAGATGTTCCAGTTGTGACCTTTGCCATGGAGAATAAGAATGCAGATGTCTATCCCTTGAAGTTTGAACTTTCCTTGTTTGAGACACAGGTTTTAGTCAATACTCCCAATGGTATATTGGAGATATCATCAGGGTTGCTTGGACGGCATAACATTTACAATATACTGGCTGCAGTAGCAGTTGGGCTTGCAGTTGGAGCACCATTAGAAGACATTGTTAGGGGAATTGAAGAGGTTGACGCTGTTCCAGGGAGGTGTGAGTTGATAGACGAGGAACAGGCGTTTGGTGTGATTGTGGATTATGCTCACACTCCTGATGCGTTGTCCAGGCTATTGGATTCTGTACGGGAGCTTGGTGCAAGGAGGATTATTACTGTAATCGGTTGTCCTGGGGAGAGTGACAGAGGGAAAAGACCTATGATGGCGAAGATTGCAACAGATAAAAGTGATGTGACAATACTGACGTCTGACAATCCGAAGAATGAAGATCCATTGGACATCTTGGATGATATGCTGGCTGGAATAGGATGGACAATGCAGGAATACTTGAAACATGGCGAGAATGATTACTACCCACCTCTTCCAAATGGTCATAGGATTTTCCTGCATGATATAAGACGAGTAGCCGTACGGTGTGCTGTTGCCATGGGTGAGGAAGGTGATATGGTTGTGGTTGCGGGCAAAGGCCATGAAGCGTATCAGATAGAAGGGGACAAAAAAGAGTTCTTTGATGACCGGGAAGAGTGTCGAGAGGCATTACAGTATGTTGATGAGCTTCACCAAGCTGGAATTGACACAAGTGAATTCCCGTGGAGGTTACCCGAGAGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009295 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0010468 GO:0016043 GO:0019222 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044424 GO:0044444 GO:0044464 GO:0048285 GO:0050789 GO:0060255 GO:0065007 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mur_ligase Mur_ligase_C Mur_ligase_M

Protein Analysis

858

Amino Acids

94.6

Weight (kDa)

4.93

Isoelectric Point (pI)

40.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mur_ligase	PF01225	347 - 409	1.8e-08	Mur ligase family, catalytic domain
Mur_ligase_M	PF08245	436 - 641	8e-55	Mur ligase middle domain
Mur_ligase_C	PF02875	664 - 809	2.6e-25	Mur ligase, glutamate ligase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63680 AT1G63680 AT1G63680
fragaria_vesca	FvH4_5g02610 FvH4_5g02610 FvH4_5g02610 FvH4_5g02610
malus_domestica	MD06G1085100.v1.1 MD14G1106100.v1.1 MD14G1106300.v1.1
prunus_persica	Prupe.5G101100_v2.0.a1
pyrus_communis	pycom06g08120
rosa_chinensis	RchiOBHm_Chr7g0197491
rosa_laevigata	RLG00000003936 RLG00000003970
rosa_multiflora	Rmu_co8124254.1_g000001 Rmu_co8184758.1_g000001 Rmu_sc0002167.1_g000003 Rmu_sc0013361.1_g000005
rosa_roxburghii	Rroxscaffold_3G00258420
rosa_rugosa	Rorug07G0040000 Rorug07G0040100
rosa_samantha	Rh7AG165200 Rh7BG167300 Rh7CG173700 Rh7DG166600
rosa_wichuraiana	Rw7G014400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	597, 1334, 2207
AccBSI	CCGCTC	1 cut(s)	1157
AccII	CGCG	1 cut(s)	45
AccIII	TCCGGA	2 cut(s)	33, 623
AclWI	GGATC	2 cut(s)	1664, 2222
AcoI	YGGCCR	2 cut(s)	481, 1476
AcsI	RAATTY	7 cut(s)	97, 137, 497, 845, 1050, 1585, 2543
AcuI	CTGAAG	2 cut(s)	779, 1521
AcvI	CACGTG	1 cut(s)	1615
AcyI	GRCGYC	4 cut(s)	489, 594, 1331, 2204
AfaI	GTAC	4 cut(s)	431, 1410, 2085, 2370
AfiI	CCNNNNNNNGG	7 cut(s)	201, 517, 623, 641, 642, 733, 1495
AgsI	TTSAA	9 cut(s)	556, 685, 718, 1466, 1659, 1801, 1808, 1970, 2290
AjnI	CCWGG	5 cut(s)	516, 540, 1987, 2066, 2128
AjuI	GAANNNNNNNTTGG	4 cut(s)	312, 344, 2007, 2039
AloI	GAACNNNNNNTCC	4 cut(s)	605, 637, 638, 670
Alw21I	GWGCWC	2 cut(s)	1394, 1942
Alw26I	GTCTC	4 cut(s)	276, 496, 1590, 1817
AlwI	GGATC	2 cut(s)	1664, 2222
AlwNI	CAGNNNCTG	1 cut(s)	802
Ama87I	CYCGRG	1 cut(s)	2561
Aor13HI	TCCGGA	2 cut(s)	33, 623
AoxI	GGCC	9 cut(s)	104, 131, 203, 279, 416, 481, 519, 1476, 2425
ApaI	GGGCCC	2 cut(s)	108, 420
ApeKI	GCWGC	2 cut(s)	1259, 1910
ApoI	RAATTY	7 cut(s)	97, 137, 497, 845, 1050, 1585, 2543
ArsI	GACNNNNNNTTYG	4 cut(s)	638, 670, 1277, 1309
AspLEI	GCGC	3 cut(s)	47, 516, 690
AspS9I	GGNCC	7 cut(s)	104, 105, 132, 416, 417, 439, 601
AsuC2I	CCSGG	6 cut(s)	437, 618, 643, 1081, 1448, 2477
AsuHPI	GGTGA	6 cut(s)	18, 1037, 1309, 2402, 2411, 2510
AsuNHI	GCTAGC	1 cut(s)	1534
AvaI	CYCGRG	1 cut(s)	2561
AvaII	GGWCC	2 cut(s)	439, 601
AxyI	CCTNAGG	1 cut(s)	729
BaeGI	GKGCMC	2 cut(s)	108, 420
BalI	TGGCCA	1 cut(s)	1478
BanII	GRGCYC	2 cut(s)	108, 420
BbrPI	CACGTG	1 cut(s)	1615
BbsI	GAAGAC	3 cut(s)	480, 1331, 1956
Bbv12I	GWGCWC	2 cut(s)	1394, 1942
BbvI	GCAGC	2 cut(s)	1246, 1897
BccI	CCATC	8 cut(s)	377, 875, 1112, 1360, 1468, 1657, 2155, 2262
BceAI	ACGGC	5 cut(s)	439, 502, 1694, 1901, 2351
BcgI	CGANNNNNNTGC	2 cut(s)	659, 693
BciT130I	CCWGG	5 cut(s)	518, 542, 1989, 2068, 2130
BciVI	GTATCC	1 cut(s)	1287
BcnI	CCSGG	6 cut(s)	437, 618, 643, 1081, 1448, 2477
BcoDI	GTCTC	4 cut(s)	276, 496, 1590, 1817
BfaI	CTAG	5 cut(s)	939, 945, 1173, 1535, 1545
BfmI	CTRYAG	2 cut(s)	1164, 1911
BfoI	RGCGCY	1 cut(s)	517
BfuI	GTATCC	1 cut(s)	1287
BisI	GCNGC	3 cut(s)	78, 1260, 1911
BlpI	GCTNAGC	2 cut(s)	976, 981
BlsI	GCNGC	3 cut(s)	79, 1261, 1912
BmcAI	AGTACT	1 cut(s)	431
Bme18I	GGWCC	2 cut(s)	439, 601
BmeT110I	CYCGRG	1 cut(s)	2561
BmgT120I	GGNCC	7 cut(s)	104, 105, 132, 416, 417, 439, 601
BmsI	GCATC	3 cut(s)	56, 1441, 2047
BmtI	GCTAGC	1 cut(s)	1538
BpiI	GAAGAC	3 cut(s)	480, 1331, 1956
BpmI	CTGGAG	2 cut(s)	524, 773
Bpu1102I	GCTNAGC	2 cut(s)	976, 981
BpuMI	CCSGG	6 cut(s)	437, 618, 643, 1081, 1448, 2477
BsaAI	YACGTR	1 cut(s)	1615
BsaBI	GATNNNNATC	1 cut(s)	1791
BsaHI	GRCGYC	4 cut(s)	489, 594, 1331, 2204
BsaI	GGTCTC	1 cut(s)	1590
BsaWI	WCCGGW	3 cut(s)	33, 623, 1046
BsaXI	ACNNNNNCTCC	6 cut(s)	605, 635, 876, 906, 947, 977
Bsc4I	CCNNNNNNNGG	7 cut(s)	201, 517, 623, 641, 642, 733, 1495
Bse118I	RCCGGY	1 cut(s)	1249
Bse1I	ACTGG	2 cut(s)	1751, 1911
Bse21I	CCTNAGG	1 cut(s)	729
Bse3DI	GCAATG	1 cut(s)	585
Bse8I	GATNNNNATC	1 cut(s)	1791
BseAI	TCCGGA	2 cut(s)	33, 623
BseBI	CCWGG	5 cut(s)	518, 542, 1989, 2068, 2130
BseJI	GATNNNNATC	1 cut(s)	1791
BseLI	CCNNNNNNNGG	7 cut(s)	201, 517, 623, 641, 642, 733, 1495
BseMI	GCAATG	1 cut(s)	585
BseMII	CTCAG	5 cut(s)	81, 281, 831, 972, 1611
BseNI	ACTGG	2 cut(s)	1751, 1911
BseRI	GAGGAG	6 cut(s)	761, 776, 794, 1167, 1637, 1640
BseSI	GKGCMC	2 cut(s)	108, 420
BseXI	GCAGC	2 cut(s)	1246, 1897
BseYI	CCCAGC	1 cut(s)	635
Bsh1236I	CGCG	1 cut(s)	45
BshFI	GGCC	9 cut(s)	106, 133, 205, 281, 418, 483, 521, 1478, 2427
BsiHKAI	GWGCWC	2 cut(s)	1394, 1942
BsiHKCI	CYCGRG	1 cut(s)	2561
BsiWI	CGTACG	1 cut(s)	2368
BslFI	GGGAC	4 cut(s)	659, 850, 1327, 2465
BslI	CCNNNNNNNGG	7 cut(s)	201, 517, 623, 641, 642, 733, 1495
BsmAI	GTCTC	4 cut(s)	276, 496, 1590, 1817
BsmBI	CGTCTC	1 cut(s)	496
BsmFI	GGGAC	4 cut(s)	659, 850, 1327, 2465
BsmI	GAATGC	1 cut(s)	1786
BsnI	GGCC	9 cut(s)	106, 133, 205, 281, 418, 483, 521, 1478, 2427
Bso31I	GGTCTC	1 cut(s)	1590
BsoBI	CYCGRG	1 cut(s)	2561
Bsp120I	GGGCCC	2 cut(s)	104, 416
Bsp1286I	GDGCHC	4 cut(s)	108, 420, 1394, 1942
Bsp13I	TCCGGA	2 cut(s)	33, 623
Bsp1407I	TGTACA	1 cut(s)	1408
Bsp143I	GATC	2 cut(s)	1669, 2227
Bsp1720I	GCTNAGC	2 cut(s)	976, 981
Bsp19I	CCATGG	2 cut(s)	1767, 2385
BspANI	GGCC	9 cut(s)	106, 133, 205, 281, 418, 483, 521, 1478, 2427
BspCNI	CTCAG	5 cut(s)	80, 280, 832, 973, 1612
BspEI	TCCGGA	2 cut(s)	33, 623
BspFNI	CGCG	1 cut(s)	45
BspMAI	CTGCAG	1 cut(s)	1915
BspOI	GCTAGC	1 cut(s)	1538
BspPI	GGATC	2 cut(s)	1664, 2222
BspTNI	GGTCTC	1 cut(s)	1590
BsrBI	CCGCTC	1 cut(s)	1157
BsrDI	GCAATG	1 cut(s)	585
BsrFI	RCCGGY	1 cut(s)	1249
BsrGI	TGTACA	1 cut(s)	1408
BsrI	ACTGG	2 cut(s)	1751, 1911
BssAI	RCCGGY	1 cut(s)	1249
BssMI	GATC	2 cut(s)	1669, 2227
BssNI	GRCGYC	4 cut(s)	489, 594, 1331, 2204
BssT1I	CCWWGG	2 cut(s)	1767, 2385
Bst2UI	CCWGG	5 cut(s)	518, 542, 1989, 2068, 2130
Bst4CI	ACNGT	6 cut(s)	30, 121, 1396, 2116, 2373, 2502
Bst6I	CTCTTC	4 cut(s)	248, 1965, 2325, 2475
BstACI	GRCGYC	4 cut(s)	489, 594, 1331, 2204
BstAPI	GCANNNNNTGC	1 cut(s)	1259
BstAUI	TGTACA	1 cut(s)	1408
BstBAI	YACGTR	1 cut(s)	1615
BstC8I	GCNNGC	6 cut(s)	207, 804, 1536, 1929, 2256, 2419
BstDEI	CTNAG	8 cut(s)	67, 267, 729, 840, 960, 976, 981, 1620
BstDSI	CCRYGG	4 cut(s)	484, 1767, 2385, 2549
BstEII	GGTNACC	1 cut(s)	2556
BstFNI	CGCG	1 cut(s)	45
BstH2I	RGCGCY	1 cut(s)	517
BstHHI	GCGC	3 cut(s)	47, 516, 690
BstKTI	GATC	2 cut(s)	1672, 2230
BstMAI	GTCTC	4 cut(s)	276, 496, 1590, 1817
BstMBI	GATC	2 cut(s)	1669, 2227
BstMWI	GCNNNNNNNGC	9 cut(s)	511, 718, 1169, 1206, 1259, 1885, 1916, 1937, 2171
BstNI	CCWGG	5 cut(s)	518, 542, 1989, 2068, 2130
BstPI	GGTNACC	1 cut(s)	2556
BstSFI	CTRYAG	2 cut(s)	1164, 1911
BstSLI	GKGCMC	2 cut(s)	108, 420
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	2 cut(s)	1246, 1897
BstV2I	GAAGAC	3 cut(s)	480, 1331, 1956
BstX2I	RGATCY	1 cut(s)	2227
BstXI	CCANNNNNNTGG	1 cut(s)	2074
BstYI	RGATCY	1 cut(s)	2227
Bsu36I	CCTNAGG	1 cut(s)	729
BsuI	GTATCC	1 cut(s)	1287
BsuRI	GGCC	9 cut(s)	106, 133, 205, 281, 418, 483, 521, 1478, 2427
BtgI	CCRYGG	4 cut(s)	484, 1767, 2385, 2549
BtgZI	GCGATG	1 cut(s)	1379
Cac8I	GCNNGC	6 cut(s)	207, 804, 1536, 1929, 2256, 2419
CaiI	CAGNNNCTG	1 cut(s)	802
CfoI	GCGC	3 cut(s)	47, 516, 690
Cfr10I	RCCGGY	1 cut(s)	1249
Cfr13I	GGNCC	7 cut(s)	104, 105, 132, 416, 417, 439, 601
CseI	GACGC	3 cut(s)	478, 1251, 1988
Csp6I	GTAC	4 cut(s)	430, 1409, 2084, 2369
CviQI	GTAC	4 cut(s)	430, 1409, 2084, 2369
DdeI	CTNAG	8 cut(s)	67, 267, 729, 840, 960, 976, 981, 1620
DpnI	GATC	2 cut(s)	1671, 2229
DpnII	GATC	2 cut(s)	1669, 2227
DraI	TTTAAA	1 cut(s)	967
EaeI	YGGCCR	2 cut(s)	481, 1476
Eam1104I	CTCTTC	4 cut(s)	248, 1965, 2325, 2475
EarI	CTCTTC	4 cut(s)	248, 1965, 2325, 2475
EciI	GGCGGA	1 cut(s)	571
Eco130I	CCWWGG	2 cut(s)	1767, 2385
Eco147I	AGGCCT	1 cut(s)	521
Eco24I	GRGCYC	2 cut(s)	108, 420
Eco31I	GGTCTC	1 cut(s)	1590
Eco32I	GATATC	1 cut(s)	1866
Eco47I	GGWCC	2 cut(s)	439, 601
Eco57I	CTGAAG	2 cut(s)	779, 1521
Eco72I	CACGTG	1 cut(s)	1615
Eco81I	CCTNAGG	1 cut(s)	729
Eco88I	CYCGRG	1 cut(s)	2561
Eco91I	GGTNACC	1 cut(s)	2556
EcoO109I	RGGNCCY	2 cut(s)	104, 601
EcoO65I	GGTNACC	1 cut(s)	2556
EcoRI	GAATTC	2 cut(s)	1050, 2543
EcoRII	CCWGG	5 cut(s)	516, 540, 1987, 2066, 2128
EcoRV	GATATC	1 cut(s)	1866
EcoT14I	CCWWGG	2 cut(s)	1767, 2385
EcoT38I	GRGCYC	2 cut(s)	108, 420
ErhI	CCWWGG	2 cut(s)	1767, 2385
Esp3I	CGTCTC	1 cut(s)	496
FaqI	GGGAC	4 cut(s)	659, 850, 1327, 2465
FauI	CCCGC	7 cut(s)	203, 395, 409, 465, 533, 612, 2410
Fnu4HI	GCNGC	3 cut(s)	78, 1260, 1911
FriOI	GRGCYC	2 cut(s)	108, 420
Fsp4HI	GCNGC	3 cut(s)	78, 1260, 1911
FspBI	CTAG	5 cut(s)	939, 945, 1173, 1535, 1545
GlaI	GCGC	3 cut(s)	46, 515, 689
GluI	GCNGC	3 cut(s)	78, 1260, 1911
GsaI	CCCAGC	1 cut(s)	639
GsuI	CTGGAG	2 cut(s)	524, 773
HaeII	RGCGCY	1 cut(s)	517
HaeIII	GGCC	9 cut(s)	106, 133, 205, 281, 418, 483, 521, 1478, 2427
HgaI	GACGC	3 cut(s)	478, 1251, 1988
HhaI	GCGC	3 cut(s)	47, 516, 690
Hin1I	GRCGYC	4 cut(s)	489, 594, 1331, 2204
Hin6I	GCGC	3 cut(s)	45, 514, 688
HinP1I	GCGC	3 cut(s)	45, 514, 688
HincII	GTYRAC	2 cut(s)	1696, 1978
HindII	GTYRAC	2 cut(s)	1696, 1978
HindIII	AAGCTT	1 cut(s)	1198
HinfI	GANTC	7 cut(s)	476, 821, 851, 1061, 1430, 2078, 2566
HphI	GGTGA	6 cut(s)	18, 1037, 1309, 2402, 2411, 2510
Hpy166II	GTNNAC	3 cut(s)	772, 1696, 1978
Hpy188I	TCNGA	9 cut(s)	70, 178, 339, 362, 448, 826, 2209, 2217, 2442
Hpy188III	TCNNGA	6 cut(s)	34, 556, 624, 1673, 2054, 2489
Hpy8I	GTNNAC	3 cut(s)	772, 1696, 1978
Hpy99I	CGWCG	8 cut(s)	425, 452, 455, 599, 671, 1267, 1285, 1333
HpyAV	CCTTC	4 cut(s)	292, 827, 2390, 2441
HpyCH4III	ACNGT	6 cut(s)	30, 121, 1396, 2116, 2373, 2502
HpyCH4IV	ACGT	4 cut(s)	594, 1331, 1614, 2204
HpyF10VI	GCNNNNNNNGC	9 cut(s)	511, 718, 1169, 1206, 1259, 1885, 1916, 1937, 2171
HpyF3I	CTNAG	8 cut(s)	67, 267, 729, 840, 960, 976, 981, 1620
HpySE526I	ACGT	4 cut(s)	594, 1331, 1614, 2204
Hsp92I	GRCGYC	4 cut(s)	489, 594, 1331, 2204
HspAI	GCGC	3 cut(s)	45, 514, 688
Kpn2I	TCCGGA	2 cut(s)	33, 623
Kzo9I	GATC	2 cut(s)	1669, 2227
LmnI	GCTCC	9 cut(s)	543, 626, 644, 748, 754, 955, 1154, 1937, 2089
Lsp1109I	GCAGC	2 cut(s)	1246, 1897
LweI	GCATC	3 cut(s)	56, 1441, 2047
MaeI	CTAG	5 cut(s)	939, 945, 1173, 1535, 1545
MaeII	ACGT	4 cut(s)	594, 1331, 1614, 2204
MaeIII	GTNAC	5 cut(s)	1615, 1756, 2138, 2191, 2556
MalI	GATC	2 cut(s)	1671, 2229
MbiI	CCGCTC	1 cut(s)	1157
MboI	GATC	2 cut(s)	1669, 2227
MflI	RGATCY	1 cut(s)	2227
MhlI	GDGCHC	4 cut(s)	108, 420, 1394, 1942
MlsI	TGGCCA	1 cut(s)	1478
MluNI	TGGCCA	1 cut(s)	1478
MlyI	GAGTC	3 cut(s)	470, 845, 1439
MmeI	TCCRAC	6 cut(s)	108, 201, 385, 471, 1407, 1915
Mox20I	TGGCCA	1 cut(s)	1478
MroI	TCCGGA	2 cut(s)	33, 623
MscI	TGGCCA	1 cut(s)	1478
MseI	TTAA	4 cut(s)	236, 966, 1146, 1347
Msp20I	TGGCCA	1 cut(s)	1478
Mva1269I	GAATGC	1 cut(s)	1786
MvaI	CCWGG	5 cut(s)	518, 542, 1989, 2068, 2130
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	9 cut(s)	511, 718, 1169, 1206, 1259, 1885, 1916, 1937, 2171
NciI	CCSGG	6 cut(s)	437, 618, 643, 1081, 1448, 2477
NcoI	CCATGG	2 cut(s)	1767, 2385
NdeII	GATC	2 cut(s)	1669, 2227
NheI	GCTAGC	1 cut(s)	1534
NmuCI	GTSAC	4 cut(s)	1615, 1756, 2138, 2191
PceI	AGGCCT	1 cut(s)	521
PcsI	WCGNNNNNNNCGW	3 cut(s)	459, 663, 1334
PctI	GAATGC	1 cut(s)	1786
PfeI	GAWTC	3 cut(s)	821, 1061, 2078
Pfl23II	CGTACG	1 cut(s)	2368
PflFI	GACNNNGTC	1 cut(s)	1330
PfoI	TCCNGGA	1 cut(s)	540
PkrI	GCNGC	3 cut(s)	79, 1261, 1912
PleI	GAGTC	3 cut(s)	470, 845, 1438
PmaCI	CACGTG	1 cut(s)	1615
PmlI	CACGTG	1 cut(s)	1615
PpsI	GAGTC	3 cut(s)	470, 845, 1438
Ppu21I	YACGTR	1 cut(s)	1615
PpuMI	RGGWCCY	1 cut(s)	601
Psp5II	RGGWCCY	1 cut(s)	601
Psp6I	CCWGG	5 cut(s)	516, 540, 1987, 2066, 2128
PspCI	CACGTG	1 cut(s)	1615
PspEI	GGTNACC	1 cut(s)	2556
PspFI	CCCAGC	1 cut(s)	635
PspGI	CCWGG	5 cut(s)	516, 540, 1987, 2066, 2128
PspLI	CGTACG	1 cut(s)	2368
PspOMI	GGGCCC	2 cut(s)	104, 416
PspPI	GGNCC	7 cut(s)	104, 105, 132, 416, 417, 439, 601
PspPPI	RGGWCCY	1 cut(s)	601
PstI	CTGCAG	1 cut(s)	1915
PstNI	CAGNNNCTG	1 cut(s)	802
PsuI	RGATCY	1 cut(s)	2227
PsyI	GACNNNGTC	1 cut(s)	1330
RsaI	GTAC	4 cut(s)	431, 1410, 2085, 2370
RsaNI	GTAC	4 cut(s)	430, 1409, 2084, 2369
SaqAI	TTAA	4 cut(s)	236, 966, 1146, 1347
SatI	GCNGC	3 cut(s)	78, 1260, 1911
Sau3AI	GATC	2 cut(s)	1669, 2227
Sau96I	GGNCC	7 cut(s)	104, 105, 132, 416, 417, 439, 601
ScaI	AGTACT	1 cut(s)	431
SchI	GAGTC	3 cut(s)	470, 845, 1439
SduI	GDGCHC	4 cut(s)	108, 420, 1394, 1942
SfaNI	GCATC	3 cut(s)	56, 1441, 2047
SfcI	CTRYAG	2 cut(s)	1164, 1911
SinI	GGWCC	2 cut(s)	439, 601
SseBI	AGGCCT	1 cut(s)	521
SspMI	CTAG	5 cut(s)	939, 945, 1173, 1535, 1545
StuI	AGGCCT	1 cut(s)	521
StyI	CCWWGG	2 cut(s)	1767, 2385
TaaI	ACNGT	6 cut(s)	30, 121, 1396, 2116, 2373, 2502
TaiI	ACGT	4 cut(s)	597, 1334, 1617, 2207
TaqI	TCGA	7 cut(s)	597, 666, 849, 896, 1064, 1283, 2488
TatI	WGTACW	2 cut(s)	429, 1408
TauI	GCSGC	1 cut(s)	80
TfiI	GAWTC	3 cut(s)	821, 1061, 2078
Tru1I	TTAA	4 cut(s)	236, 966, 1146, 1347
Tru9I	TTAA	4 cut(s)	236, 966, 1146, 1347
TseFI	GTSAC	4 cut(s)	1615, 1756, 2138, 2191
TseI	GCWGC	2 cut(s)	1259, 1910
Tsp45I	GTSAC	4 cut(s)	1615, 1756, 2138, 2191
TspDTI	ATGAA	6 cut(s)	804, 1374, 1569, 1714, 2238, 2445
TspGWI	ACGGA	1 cut(s)	1269
Tth111I	GACNNNGTC	1 cut(s)	1330
VpaK11BI	GGWCC	2 cut(s)	439, 601
XapI	RAATTY	7 cut(s)	97, 137, 497, 845, 1050, 1585, 2543
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1855
XspI	CTAG	5 cut(s)	939, 945, 1173, 1535, 1545
ZraI	GACGTC	3 cut(s)	595, 1332, 2205
ZrmI	AGTACT	1 cut(s)	431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.