Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013361.1

Orthogroup ID

OG0006369

Physical Location & Seq

Genomic Coordinates Reverse (-)

24022 .. 27938

Gene Structure 3917 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013361.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

atggccttcactttcctctcaatccctcactttctctctccccaacccaactttctctctctaaaaccccaattcgcctctctccgaccctccagcttccctctgccggcccgcccactcaaacccgcccacgcaatcggccccgacggcaagtactacccggacccctccgacgacgacccgcccgaagcccccgaagactccggccacggcgtctccaaattccagcaaatccagcgccaggcctcccgccaccagaagctccaggaggacgacttcaagaagcaccagaacaccatgctctccgccattgccgacgtcgaggacccgccggagaaccccggctccggaactacccccagctccggggacgatttgttcggcgacatcgacgaagctattgccttgaagcgcaaggagtttgtgaagcaagggcttttgaagccgaaccctaaggtggaggcggtggaggagctggagctggagccggacgaggtggtggacttggaggagattgatgaacttcaggggctggcgattgtgggtgaggattcggatgaggaagggactgagaaattcgactcaaaggttagtgatttggatgagaaagatggtgtttcggtttcgagttctttgtttgatatggattttgataattatggtaagactagggctagaattgtggaacctaagtttaaaatgagcttagctgagcttttggatgagagtaaagtggtgcctatttcggtttatggtgatttagaggtggagataaccggaattcagcacgattcgagggtggtcagtgccggggatttgtttgtgtgctgtgttgggaggaaaaccgatggtcatttgtatttgagtgaggctattaagagaggagccgtggctgtagtagctagtaaggagatatacatggaggaaagcttggggtgcaaggcattggtcattgtggaagataccaatgctgatttaccggcattggctgcatcgttttataggtatccgtcgaagaatatgtcggtgattgggataacggggacgaatgggaagacgacgtcagcatatttgataaaggggatgtatgaagcaatgggattgaggacgggtatgttgagcacagttgcgtattacgttcatggagataataagttggagtcgcctaatacaaccccggatgctgttttggttcaaaatatgatggccaagatgctccataatggggctgaagcagttgtcatggaggcttcttctcacgggctagctctgtctaggtgtgatgaagttgatattgacatagcggtttttacaaatttgacgagagaccatttggattttcaggtgactgaggaggagtatagggaggcaaagggtaagttgttttcaaggatggttgatccagaacggcacaggaaagttgtcaacattgatgacccaaatgcaccattcttcatttcacaggggaacccagatgttccagttgtgacctttgccatggagaataagaatgcagatgtctatcccttgaagtttgaactttccttgtttgagacacaggttttagtcaatactcccaatggtatattggagatatcatcagggttgcttggacggcataacatttacaatatactggctgcagtagcagttgggattgcagttggagcaccattagaagacatcgttaggggaattgaagaggttgatgctgttccagggaggtgtgagttgatagacgaggaacaggcgtttggtgtgattgtggattatgctcacactcctgatgccttgtccaggctattggattctgtacgagagcttggtgcaaggaggattattactgtaatcggttgtcctggggagagtgacagagggaaaagacctatgatggcgaagattgcaacagataaaagtgatgtgacaatactgacatctgacaatccaaagaatgaagatccattggacatcttggatgatatgctggctggtataggatggacaatgcaggaatacttgaaacatggcgagaatgattactacccacctcttccaaatggtcataggattttcctgcatgatataagacgagtagccgtacggtgtgctgttgccatgggtgaggaaggtgatatggttgtggttgcgggcaaaggccatgaagcgtatcagatagaaggggacaaaaaagagttctttgatgaccgggaagagtgtcgagaggcattacagtatgttgatgagcttcaccaagctggaattgacacaagtgaattcccgtggaggttacccgagagtcattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009295 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010020 GO:0010468 GO:0016043 GO:0019222 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044424 GO:0044444 GO:0044464 GO:0048285 GO:0050789 GO:0060255 GO:0065007 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mur_ligase Mur_ligase_C Mur_ligase_M

Protein Analysis

767

Amino Acids

84.59

Weight (kDa)

4.64

Isoelectric Point (pI)

37.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63680 AT1G63680 AT1G63680
fragaria_vesca	FvH4_5g02610 FvH4_5g02610 FvH4_5g02610 FvH4_5g02610
malus_domestica	MD06G1085100.v1.1 MD14G1106100.v1.1 MD14G1106300.v1.1
prunus_persica	Prupe.5G101100_v2.0.a1
pyrus_communis	pycom06g08120
rosa_chinensis	RchiOBHm_Chr7g0197491
rosa_laevigata	RLG00000003936 RLG00000003970
rosa_multiflora	Rmu_co8124254.1_g000001 Rmu_co8184758.1_g000001 Rmu_sc0002167.1_g000003 Rmu_sc0013361.1_g000005
rosa_roxburghii	Rroxscaffold_3G00258420
rosa_rugosa	Rorug07G0040000 Rorug07G0040100
rosa_samantha	Rh7AG165200 Rh7BG167300 Rh7CG173700 Rh7DG166600
rosa_wichuraiana	Rw7G014400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	321, 1064
AccB1I	GGYRCC	1 cut(s)	736
AccIII	TCCGGA	1 cut(s)	347
AciI	CCGC	9 cut(s)	112, 126, 182, 250, 306, 329, 464, 1304, 2147
AclWI	GGATC	2 cut(s)	1394, 1952
AcoI	YGGCCR	2 cut(s)	205, 1206
AcsI	RAATTY	5 cut(s)	221, 575, 780, 1315, 2273
AcuI	CTGAAG	2 cut(s)	509, 1251
AcyI	GRCGYC	3 cut(s)	213, 318, 1061
AfaI	GTAC	3 cut(s)	155, 1815, 2100
AfiI	CCNNNNNNNGG	8 cut(s)	106, 241, 347, 365, 366, 457, 1225, 1797
AgsI	TTSAA	9 cut(s)	280, 409, 442, 1196, 1389, 1531, 1538, 1700, 2020
AjnI	CCWGG	5 cut(s)	240, 264, 1717, 1796, 1858
AjuI	GAANNNNNNNTTGG	4 cut(s)	36, 68, 1737, 1769
AloI	GAACNNNNNNTCC	4 cut(s)	329, 361, 362, 394
Alw21I	GWGCWC	2 cut(s)	1124, 1672
Alw26I	GTCTC	3 cut(s)	220, 1320, 1547
AlwI	GGATC	2 cut(s)	1394, 1952
AlwNI	CAGNNNCTG	1 cut(s)	532
Ama87I	CYCGRG	1 cut(s)	2291
Aor13HI	TCCGGA	1 cut(s)	347
AoxI	GGCC	7 cut(s)	3, 108, 139, 205, 243, 1206, 2155
ApeKI	GCWGC	2 cut(s)	989, 1640
ApoI	RAATTY	5 cut(s)	221, 575, 780, 1315, 2273
ArsI	GACNNNNNNTTYG	4 cut(s)	362, 394, 1007, 1039
AspLEI	GCGC	2 cut(s)	240, 414
AspS9I	GGNCC	4 cut(s)	109, 140, 163, 325
AsuC2I	CCSGG	6 cut(s)	161, 342, 367, 811, 1178, 2207
AsuHPI	GGTGA	7 cut(s)	557, 767, 1039, 1357, 2132, 2141, 2240
AsuNHI	GCTAGC	1 cut(s)	1264
AvaI	CYCGRG	1 cut(s)	2291
AvaII	GGWCC	2 cut(s)	163, 325
AxyI	CCTNAGG	1 cut(s)	453
BalI	TGGCCA	1 cut(s)	1208
BanI	GGYRCC	1 cut(s)	736
BbsI	GAAGAC	3 cut(s)	204, 1061, 1686
Bbv12I	GWGCWC	2 cut(s)	1124, 1672
BbvI	GCAGC	2 cut(s)	976, 1627
BccI	CCATC	6 cut(s)	605, 842, 1198, 1387, 1885, 1992
BceAI	ACGGC	6 cut(s)	163, 226, 872, 1424, 1631, 2081
BcgI	CGANNNNNNTGC	2 cut(s)	383, 417
BciT130I	CCWGG	5 cut(s)	242, 266, 1719, 1798, 1860
BciVI	GTATCC	1 cut(s)	1017
BcnI	CCSGG	6 cut(s)	161, 342, 367, 811, 1178, 2207
BcoDI	GTCTC	3 cut(s)	220, 1320, 1547
BfaI	CTAG	5 cut(s)	669, 675, 903, 1265, 1275
BfmI	CTRYAG	2 cut(s)	894, 1641
BfoI	RGCGCY	1 cut(s)	241
BfuI	GTATCC	1 cut(s)	1017
BglI	GCCNNNNNGGC	1 cut(s)	147
BisI	GCNGC	2 cut(s)	990, 1641
BlpI	GCTNAGC	2 cut(s)	706, 711
BlsI	GCNGC	2 cut(s)	991, 1642
BmcAI	AGTACT	1 cut(s)	155
Bme18I	GGWCC	2 cut(s)	163, 325
BmeT110I	CYCGRG	1 cut(s)	2291
BmgT120I	GGNCC	4 cut(s)	109, 140, 163, 325
BmiI	GGNNCC	9 cut(s)	142, 165, 327, 346, 486, 687, 738, 886, 1469
BmsI	GCATC	5 cut(s)	1001, 1171, 1203, 1699, 1777
BmtI	GCTAGC	1 cut(s)	1268
BpiI	GAAGAC	3 cut(s)	204, 1061, 1686
BpmI	CTGGAG	4 cut(s)	76, 248, 497, 503
Bpu1102I	GCTNAGC	2 cut(s)	706, 711
BpuMI	CCSGG	6 cut(s)	161, 342, 367, 811, 1178, 2207
BsaBI	GATNNNNATC	1 cut(s)	1521
BsaHI	GRCGYC	3 cut(s)	213, 318, 1061
BsaI	GGTCTC	1 cut(s)	1320
BsaWI	WCCGGW	2 cut(s)	347, 776
BsaXI	ACNNNNNCTCC	4 cut(s)	200, 230, 329, 359
Bsc4I	CCNNNNNNNGG	8 cut(s)	106, 241, 347, 365, 366, 457, 1225, 1797
Bse118I	RCCGGY	2 cut(s)	106, 979
Bse1I	ACTGG	2 cut(s)	1481, 1641
Bse21I	CCTNAGG	1 cut(s)	453
Bse3DI	GCAATG	2 cut(s)	309, 1101
Bse8I	GATNNNNATC	1 cut(s)	1521
BseAI	TCCGGA	1 cut(s)	347
BseBI	CCWGG	5 cut(s)	242, 266, 1719, 1798, 1860
BseGI	GGATG	8 cut(s)	562, 607, 727, 1089, 1186, 1398, 1981, 2003
BseJI	GATNNNNATC	1 cut(s)	1521
BseLI	CCNNNNNNNGG	8 cut(s)	106, 241, 347, 365, 366, 457, 1225, 1797
BseMI	GCAATG	2 cut(s)	309, 1101
BseMII	CTCAG	3 cut(s)	561, 702, 1341
BseNI	ACTGG	2 cut(s)	1481, 1641
BseRI	GAGGAG	5 cut(s)	485, 524, 897, 1367, 1370
BseXI	GCAGC	2 cut(s)	976, 1627
BseYI	CCCAGC	1 cut(s)	359
BshFI	GGCC	7 cut(s)	5, 110, 141, 207, 245, 1208, 2157
BshNI	GGYRCC	1 cut(s)	736
BsiHKAI	GWGCWC	2 cut(s)	1124, 1672
BsiHKCI	CYCGRG	1 cut(s)	2291
BsiWI	CGTACG	1 cut(s)	2098
BslFI	GGGAC	4 cut(s)	383, 580, 1057, 2195
BslI	CCNNNNNNNGG	8 cut(s)	106, 241, 347, 365, 366, 457, 1225, 1797
BsmAI	GTCTC	3 cut(s)	220, 1320, 1547
BsmBI	CGTCTC	1 cut(s)	220
BsmFI	GGGAC	4 cut(s)	383, 580, 1057, 2195
BsmI	GAATGC	1 cut(s)	1516
BsnI	GGCC	7 cut(s)	5, 110, 141, 207, 245, 1208, 2157
Bso31I	GGTCTC	1 cut(s)	1320
BsoBI	CYCGRG	1 cut(s)	2291
Bsp1286I	GDGCHC	2 cut(s)	1124, 1672
Bsp13I	TCCGGA	1 cut(s)	347
Bsp143I	GATC	2 cut(s)	1399, 1957
Bsp1720I	GCTNAGC	2 cut(s)	706, 711
Bsp19I	CCATGG	2 cut(s)	1497, 2115
BspACI	CCGC	9 cut(s)	112, 126, 182, 250, 306, 329, 464, 1304, 2147
BspANI	GGCC	7 cut(s)	5, 110, 141, 207, 245, 1208, 2157
BspCNI	CTCAG	3 cut(s)	562, 703, 1342
BspEI	TCCGGA	1 cut(s)	347
BspLI	GGNNCC	9 cut(s)	142, 165, 327, 346, 486, 687, 738, 886, 1469
BspMAI	CTGCAG	1 cut(s)	1645
BspOI	GCTAGC	1 cut(s)	1268
BspPI	GGATC	2 cut(s)	1394, 1952
BspT107I	GGYRCC	1 cut(s)	736
BspTNI	GGTCTC	1 cut(s)	1320
BsrDI	GCAATG	2 cut(s)	309, 1101
BsrFI	RCCGGY	2 cut(s)	106, 979
BsrI	ACTGG	2 cut(s)	1481, 1641
BssAI	RCCGGY	2 cut(s)	106, 979
BssMI	GATC	2 cut(s)	1399, 1957
BssNI	GRCGYC	3 cut(s)	213, 318, 1061
BssT1I	CCWWGG	2 cut(s)	1497, 2115
Bst2UI	CCWGG	5 cut(s)	242, 266, 1719, 1798, 1860
Bst4CI	ACNGT	4 cut(s)	1126, 1846, 2103, 2232
Bst6I	CTCTTC	3 cut(s)	1695, 2055, 2205
BstACI	GRCGYC	3 cut(s)	213, 318, 1061
BstAPI	GCANNNNNTGC	1 cut(s)	989
BstC8I	GCNNGC	6 cut(s)	108, 112, 534, 1266, 1986, 2149
BstDEI	CTNAG	6 cut(s)	453, 570, 690, 706, 711, 1350
BstDSI	CCRYGG	5 cut(s)	208, 888, 1497, 2115, 2279
BstEII	GGTNACC	1 cut(s)	2286
BstENI	CCTNNNNNAGG	1 cut(s)	1795
BstF5I	GGATG	8 cut(s)	562, 607, 727, 1089, 1186, 1398, 1981, 2003
BstH2I	RGCGCY	1 cut(s)	241
BstHHI	GCGC	2 cut(s)	240, 414
BstKTI	GATC	2 cut(s)	1402, 1960
BstMAI	GTCTC	3 cut(s)	220, 1320, 1547
BstMBI	GATC	2 cut(s)	1399, 1957
BstNI	CCWGG	5 cut(s)	242, 266, 1719, 1798, 1860
BstPI	GGTNACC	1 cut(s)	2286
BstSFI	CTRYAG	2 cut(s)	894, 1641
BstV1I	GCAGC	2 cut(s)	976, 1627
BstV2I	GAAGAC	3 cut(s)	204, 1061, 1686
BstX2I	RGATCY	1 cut(s)	1957
BstXI	CCANNNNNNTGG	1 cut(s)	1804
BstYI	RGATCY	1 cut(s)	1957
Bsu36I	CCTNAGG	1 cut(s)	453
BsuI	GTATCC	1 cut(s)	1017
BsuRI	GGCC	7 cut(s)	5, 110, 141, 207, 245, 1208, 2157
BtgI	CCRYGG	5 cut(s)	208, 888, 1497, 2115, 2279
BtsCI	GGATG	8 cut(s)	562, 607, 727, 1089, 1186, 1398, 1981, 2003
BtsIMutI	CAGTG	1 cut(s)	811
Cac8I	GCNNGC	6 cut(s)	108, 112, 534, 1266, 1986, 2149
CaiI	CAGNNNCTG	1 cut(s)	532
CfoI	GCGC	2 cut(s)	240, 414
Cfr10I	RCCGGY	2 cut(s)	106, 979
Cfr13I	GGNCC	4 cut(s)	109, 140, 163, 325
CseI	GACGC	1 cut(s)	202
Csp6I	GTAC	3 cut(s)	154, 1814, 2099
CviAII	CATG	9 cut(s)	298, 919, 1142, 1243, 1498, 2024, 2078, 2116, 2159
CviQI	GTAC	3 cut(s)	154, 1814, 2099
DdeI	CTNAG	6 cut(s)	453, 570, 690, 706, 711, 1350
DpnI	GATC	2 cut(s)	1401, 1959
DpnII	GATC	2 cut(s)	1399, 1957
DraI	TTTAAA	1 cut(s)	697
EaeI	YGGCCR	2 cut(s)	205, 1206
Eam1104I	CTCTTC	3 cut(s)	1695, 2055, 2205
EarI	CTCTTC	3 cut(s)	1695, 2055, 2205
EciI	GGCGGA	1 cut(s)	295
Eco130I	CCWWGG	2 cut(s)	1497, 2115
Eco147I	AGGCCT	1 cut(s)	245
Eco31I	GGTCTC	1 cut(s)	1320
Eco32I	GATATC	1 cut(s)	1596
Eco47I	GGWCC	2 cut(s)	163, 325
Eco57I	CTGAAG	2 cut(s)	509, 1251
Eco81I	CCTNAGG	1 cut(s)	453
Eco88I	CYCGRG	1 cut(s)	2291
Eco91I	GGTNACC	1 cut(s)	2286
EcoNI	CCTNNNNNAGG	1 cut(s)	1795
EcoO109I	RGGNCCY	1 cut(s)	325
EcoO65I	GGTNACC	1 cut(s)	2286
EcoRI	GAATTC	2 cut(s)	780, 2273
EcoRII	CCWGG	5 cut(s)	240, 264, 1717, 1796, 1858
EcoRV	GATATC	1 cut(s)	1596
EcoT14I	CCWWGG	2 cut(s)	1497, 2115
ErhI	CCWWGG	2 cut(s)	1497, 2115
Esp3I	CGTCTC	1 cut(s)	220
FaeI	CATG	9 cut(s)	301, 922, 1145, 1246, 1501, 2027, 2081, 2119, 2162
FaqI	GGGAC	4 cut(s)	383, 580, 1057, 2195
FatI	CATG	9 cut(s)	297, 918, 1141, 1242, 1497, 2023, 2077, 2115, 2158
FauI	CCCGC	6 cut(s)	119, 133, 189, 257, 336, 2140
Fnu4HI	GCNGC	2 cut(s)	990, 1641
FokI	GGATG	8 cut(s)	569, 614, 734, 1096, 1193, 1405, 1988, 2010
Fsp4HI	GCNGC	2 cut(s)	990, 1641
FspBI	CTAG	5 cut(s)	669, 675, 903, 1265, 1275
GlaI	GCGC	2 cut(s)	239, 413
GluI	GCNGC	2 cut(s)	990, 1641
GsaI	CCCAGC	1 cut(s)	363
GsuI	CTGGAG	4 cut(s)	76, 248, 497, 503
HaeII	RGCGCY	1 cut(s)	241
HaeIII	GGCC	7 cut(s)	5, 110, 141, 207, 245, 1208, 2157
HgaI	GACGC	1 cut(s)	202
HhaI	GCGC	2 cut(s)	240, 414
Hin1I	GRCGYC	3 cut(s)	213, 318, 1061
Hin1II	CATG	9 cut(s)	301, 922, 1145, 1246, 1501, 2027, 2081, 2119, 2162
Hin6I	GCGC	2 cut(s)	238, 412
HinP1I	GCGC	2 cut(s)	238, 412
HincII	GTYRAC	1 cut(s)	1426
HindII	GTYRAC	1 cut(s)	1426
HindIII	AAGCTT	1 cut(s)	928
HinfI	GANTC	7 cut(s)	200, 551, 581, 791, 1160, 1808, 2296
HphI	GGTGA	7 cut(s)	557, 767, 1039, 1357, 2132, 2141, 2240
Hpy166II	GTNNAC	2 cut(s)	502, 1426
Hpy188I	TCNGA	5 cut(s)	86, 172, 556, 1939, 2172
Hpy188III	TCNNGA	5 cut(s)	280, 348, 1403, 1784, 2219
Hpy8I	GTNNAC	2 cut(s)	502, 1426
Hpy99I	CGWCG	8 cut(s)	149, 176, 179, 320, 323, 395, 1015, 1063
HpyAV	CCTTC	4 cut(s)	16, 557, 2120, 2171
HpyCH4III	ACNGT	4 cut(s)	1126, 1846, 2103, 2232
HpyCH4IV	ACGT	3 cut(s)	318, 1061, 1137
HpyF3I	CTNAG	6 cut(s)	453, 570, 690, 706, 711, 1350
HpySE526I	ACGT	3 cut(s)	318, 1061, 1137
Hsp92I	GRCGYC	3 cut(s)	213, 318, 1061
Hsp92II	CATG	9 cut(s)	301, 922, 1145, 1246, 1501, 2027, 2081, 2119, 2162
HspAI	GCGC	2 cut(s)	238, 412
Kpn2I	TCCGGA	1 cut(s)	347
KroI	GCCGGC	1 cut(s)	106
KroNI	GCCGGC	1 cut(s)	108
Kzo9I	GATC	2 cut(s)	1399, 1957
LmnI	GCTCC	9 cut(s)	267, 350, 368, 472, 478, 484, 884, 1221, 1667
Lsp1109I	GCAGC	2 cut(s)	976, 1627
LweI	GCATC	5 cut(s)	1001, 1171, 1203, 1699, 1777
MaeI	CTAG	5 cut(s)	669, 675, 903, 1265, 1275
MaeII	ACGT	3 cut(s)	318, 1061, 1137
MaeIII	GTNAC	5 cut(s)	1345, 1486, 1868, 1921, 2286
MalI	GATC	2 cut(s)	1401, 1959
MboI	GATC	2 cut(s)	1399, 1957
MflI	RGATCY	1 cut(s)	1957
MhlI	GDGCHC	2 cut(s)	1124, 1672
MlsI	TGGCCA	1 cut(s)	1208
MluNI	TGGCCA	1 cut(s)	1208
MlyI	GAGTC	3 cut(s)	194, 575, 1169
MmeI	TCCRAC	4 cut(s)	109, 195, 1137, 1645
Mox20I	TGGCCA	1 cut(s)	1208
MroI	TCCGGA	1 cut(s)	347
MroNI	GCCGGC	1 cut(s)	106
MscI	TGGCCA	1 cut(s)	1208
MseI	TTAA	2 cut(s)	696, 876
Msp20I	TGGCCA	1 cut(s)	1208
Mva1269I	GAATGC	1 cut(s)	1516
MvaI	CCWGG	5 cut(s)	242, 266, 1719, 1798, 1860
NaeI	GCCGGC	1 cut(s)	108
NciI	CCSGG	6 cut(s)	161, 342, 367, 811, 1178, 2207
NcoI	CCATGG	2 cut(s)	1497, 2115
NdeII	GATC	2 cut(s)	1399, 1957
NgoMIV	GCCGGC	1 cut(s)	106
NheI	GCTAGC	1 cut(s)	1264
NlaIII	CATG	9 cut(s)	301, 922, 1145, 1246, 1501, 2027, 2081, 2119, 2162
NlaIV	GGNNCC	9 cut(s)	142, 165, 327, 346, 486, 687, 738, 886, 1469
NmuCI	GTSAC	4 cut(s)	1345, 1486, 1868, 1921
PceI	AGGCCT	1 cut(s)	245
PcsI	WCGNNNNNNNCGW	2 cut(s)	183, 387
PctI	GAATGC	1 cut(s)	1516
PdiI	GCCGGC	1 cut(s)	108
PfeI	GAWTC	3 cut(s)	551, 791, 1808
Pfl23II	CGTACG	1 cut(s)	2098
PflFI	GACNNNGTC	1 cut(s)	1060
PfoI	TCCNGGA	1 cut(s)	264
PkrI	GCNGC	2 cut(s)	991, 1642
PleI	GAGTC	3 cut(s)	194, 575, 1168
PpsI	GAGTC	3 cut(s)	194, 575, 1168
PpuMI	RGGWCCY	1 cut(s)	325
Psp5II	RGGWCCY	1 cut(s)	325
Psp6I	CCWGG	5 cut(s)	240, 264, 1717, 1796, 1858
PspEI	GGTNACC	1 cut(s)	2286
PspFI	CCCAGC	1 cut(s)	359
PspGI	CCWGG	5 cut(s)	240, 264, 1717, 1796, 1858
PspLI	CGTACG	1 cut(s)	2098
PspN4I	GGNNCC	9 cut(s)	142, 165, 327, 346, 486, 687, 738, 886, 1469
PspPI	GGNCC	4 cut(s)	109, 140, 163, 325
PspPPI	RGGWCCY	1 cut(s)	325
PstI	CTGCAG	1 cut(s)	1645
PstNI	CAGNNNCTG	1 cut(s)	532
PsuI	RGATCY	1 cut(s)	1957
PsyI	GACNNNGTC	1 cut(s)	1060
RsaI	GTAC	3 cut(s)	155, 1815, 2100
RsaNI	GTAC	3 cut(s)	154, 1814, 2099
SaqAI	TTAA	2 cut(s)	696, 876
SatI	GCNGC	2 cut(s)	990, 1641
Sau3AI	GATC	2 cut(s)	1399, 1957
Sau96I	GGNCC	4 cut(s)	109, 140, 163, 325
ScaI	AGTACT	1 cut(s)	155
SchI	GAGTC	3 cut(s)	194, 575, 1169
SduI	GDGCHC	2 cut(s)	1124, 1672
SfaNI	GCATC	5 cut(s)	1001, 1171, 1203, 1699, 1777
SfcI	CTRYAG	2 cut(s)	894, 1641
SinI	GGWCC	2 cut(s)	163, 325
SseBI	AGGCCT	1 cut(s)	245
SsiI	CCGC	9 cut(s)	112, 126, 182, 250, 306, 329, 464, 1304, 2147
SspMI	CTAG	5 cut(s)	669, 675, 903, 1265, 1275
StuI	AGGCCT	1 cut(s)	245
StyI	CCWWGG	2 cut(s)	1497, 2115
TaaI	ACNGT	4 cut(s)	1126, 1846, 2103, 2232
TaiI	ACGT	3 cut(s)	321, 1064, 1140
TaqI	TCGA	7 cut(s)	321, 390, 579, 626, 794, 1013, 2218
TatI	WGTACW	1 cut(s)	153
TfiI	GAWTC	3 cut(s)	551, 791, 1808
Tru1I	TTAA	2 cut(s)	696, 876
Tru9I	TTAA	2 cut(s)	696, 876
TscAI	CASTG	1 cut(s)	811
TseFI	GTSAC	4 cut(s)	1345, 1486, 1868, 1921
TseI	GCWGC	2 cut(s)	989, 1640
Tsp45I	GTSAC	4 cut(s)	1345, 1486, 1868, 1921
TspDTI	ATGAA	7 cut(s)	534, 1104, 1130, 1299, 1444, 1968, 2175
TspGWI	ACGGA	1 cut(s)	999
TspRI	CASTG	1 cut(s)	811
Tth111I	GACNNNGTC	1 cut(s)	1060
VpaK11BI	GGWCC	2 cut(s)	163, 325
XagI	CCTNNNNNAGG	1 cut(s)	1795
XapI	RAATTY	5 cut(s)	221, 575, 780, 1315, 2273
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1585
XspI	CTAG	5 cut(s)	669, 675, 903, 1265, 1275
ZraI	GACGTC	2 cut(s)	319, 1062
ZrmI	AGTACT	1 cut(s)	155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.